AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene02301

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02301.t1 MTR_2g011640 98.558 624 9 0 1 624 52 675 0.0 1285
MS.gene02301.t1 MTR_4g091510 75.598 627 148 2 1 624 1 625 0.0 979
MS.gene02301.t1 MTR_4g091510 75.598 627 148 2 1 624 6 630 0.0 978
MS.gene02301.t1 MTR_8g464860 59.008 605 224 5 31 624 31 622 0.0 718
MS.gene02301.t1 MTR_3g082750 29.206 315 194 7 214 523 203 493 3.60e-32 132
MS.gene02301.t1 MTR_3g094740 29.605 304 188 7 211 508 200 483 3.30e-29 123
MS.gene02301.t1 MTR_3g094740 29.605 304 188 7 211 508 200 483 3.98e-29 123
MS.gene02301.t1 MTR_8g091710 28.667 300 188 7 211 504 191 470 4.46e-27 117
MS.gene02301.t1 MTR_6g038750 27.273 385 246 8 218 598 132 486 2.11e-23 105
MS.gene02301.t1 MTR_4g026450 27.425 299 184 6 224 514 161 434 2.02e-22 102
MS.gene02301.t1 MTR_3g105760 23.698 384 259 8 230 600 136 498 7.49e-22 100
MS.gene02301.t1 MTR_5g068050 25.948 343 228 8 213 550 126 447 9.47e-22 99.8
MS.gene02301.t1 MTR_1g009860 28.269 283 179 6 216 494 132 394 4.31e-21 98.2
MS.gene02301.t1 MTR_1g009860 28.269 283 179 6 216 494 132 394 5.64e-21 97.8
MS.gene02301.t1 MTR_1g008980 26.667 345 203 11 192 508 13 335 2.43e-19 92.8
MS.gene02301.t1 MTR_1g095480 26.923 338 211 7 217 539 202 518 7.74e-19 91.3
MS.gene02301.t1 MTR_1g095480 26.923 338 211 7 217 539 202 518 1.07e-18 90.5
MS.gene02301.t1 MTR_1g046620 25.342 292 194 6 218 508 187 455 1.15e-18 90.9
MS.gene02301.t1 MTR_4g104070 28.302 318 195 10 226 529 79 377 1.30e-18 89.7
MS.gene02301.t1 MTR_3g070410 27.500 320 192 12 224 524 96 394 2.08e-17 86.3
MS.gene02301.t1 MTR_0053s0030 26.761 284 189 6 226 508 151 416 2.29e-17 86.7
MS.gene02301.t1 MTR_5g077080 25.965 285 188 8 229 510 98 362 1.54e-16 83.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02301.t1 AT1G11390 72.172 557 143 4 71 624 77 624 0.0 851
MS.gene02301.t1 AT1G61640 64.991 557 190 4 71 624 67 621 0.0 750
MS.gene02301.t1 AT1G61640 63.514 518 184 4 71 585 67 582 0.0 676
MS.gene02301.t1 AT1G61640 57.527 372 155 2 71 441 67 436 2.87e-149 440
MS.gene02301.t1 AT3G07700 29.393 313 194 7 214 523 192 480 4.20e-30 126
MS.gene02301.t1 AT3G07700 29.393 313 194 7 214 523 192 480 4.56e-30 126
MS.gene02301.t1 AT3G07700 29.393 313 194 7 214 523 192 480 4.56e-30 126
MS.gene02301.t1 AT3G07700 29.393 313 194 7 214 523 192 480 4.56e-30 126
MS.gene02301.t1 AT5G64940 29.276 304 189 7 211 508 215 498 2.06e-28 121
MS.gene02301.t1 AT5G64940 29.276 304 189 7 211 508 215 498 2.06e-28 121
MS.gene02301.t1 AT5G24970 25.618 445 269 12 186 600 148 560 1.49e-26 115
MS.gene02301.t1 AT5G24970 25.618 445 269 12 186 600 109 521 1.55e-26 115
MS.gene02301.t1 AT1G79600 29.110 292 188 6 218 508 150 423 5.72e-26 113
MS.gene02301.t1 AT5G24970 25.169 445 268 13 186 600 109 518 1.77e-23 105
MS.gene02301.t1 AT1G65950 29.730 296 186 8 177 463 53 335 2.44e-23 103
MS.gene02301.t1 AT1G65950 29.730 296 186 8 177 463 53 335 4.32e-23 103
MS.gene02301.t1 AT1G71810 25.654 382 256 7 218 598 123 477 2.22e-21 99.4
MS.gene02301.t1 AT4G24810 27.628 333 190 10 218 527 25 329 3.80e-20 94.0
MS.gene02301.t1 AT4G24810 27.628 333 190 10 218 527 25 329 3.80e-20 94.0
MS.gene02301.t1 AT4G24810 27.900 319 181 9 218 515 25 315 4.03e-20 92.0
MS.gene02301.t1 AT4G24810 27.164 335 193 9 218 529 68 374 4.22e-20 94.4
MS.gene02301.t1 AT4G24810 29.352 293 158 9 218 489 25 289 1.12e-19 90.9
MS.gene02301.t1 AT5G50330 25.872 344 212 10 226 550 76 395 1.26e-19 92.8
MS.gene02301.t1 AT4G31390 27.365 296 175 8 216 499 168 435 1.30e-19 93.6
MS.gene02301.t1 AT3G24190 25.581 301 193 8 211 508 191 463 1.58e-19 93.6
MS.gene02301.t1 AT4G24810 27.193 342 191 11 218 529 25 338 5.02e-19 90.5
MS.gene02301.t1 AT2G39190 22.388 402 272 8 217 599 201 581 1.82e-18 90.1
MS.gene02301.t1 AT5G05200 23.907 343 235 8 213 550 127 448 8.98e-18 87.4
MS.gene02301.t1 AT5G24810 26.861 309 184 8 216 508 100 382 2.38e-16 83.6
MS.gene02301.t1 AT2G40090 25.817 306 195 12 224 514 98 386 2.13e-13 73.6
MS.gene02301.t1 AT5G24810 25.588 340 180 10 216 508 100 413 5.05e-13 73.2
MS.gene02301.t1 AT5G50330 23.547 344 204 10 226 550 76 379 6.31e-13 71.6
MS.gene02301.t1 AT4G31390 25.475 263 156 8 249 499 2 236 1.13e-11 67.8
MS.gene02301.t1 AT2G39190 27.108 166 112 2 217 382 201 357 3.98e-11 65.5

Find 144 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGACCGTTTGCAGATTATTT+TGG 0.196932 2.1:+72367404 MS.gene02301:CDS
TGCCTGAGCAATCATATTTA+TGG 0.231958 2.1:-72367132 None:intergenic
AAATCTGCTCTTGCTCATAT+TGG 0.237300 2.1:+72368097 MS.gene02301:CDS
AGCCATAGTTTCCTAAAATT+TGG 0.244909 2.1:-72367428 None:intergenic
CAGGTCCTGCTTTCATAAAA+TGG 0.265236 2.1:+72367480 MS.gene02301:CDS
TCCTGGGAATATTCTTGTTC+GGG 0.277946 2.1:+72369069 MS.gene02301:CDS
TTTGACTCGCTCTTATTTGC+TGG 0.307748 2.1:+72367166 MS.gene02301:CDS
GACCTTTCTTACACGATTGA+TGG 0.313065 2.1:+72370936 MS.gene02301:CDS
GGATGAACTATGTCACCTTC+TGG 0.327276 2.1:-72370473 None:intergenic
AATCTGCTCTTGCTCATATT+GGG 0.336729 2.1:+72368098 MS.gene02301:CDS
TCAATGAAAGCCTTTGGATT+AGG 0.336903 2.1:-72369274 None:intergenic
CTGCATCTCCCCAACTTCGC+TGG 0.337075 2.1:-72367232 None:intergenic
GCTTCATTATGAAACTTATA+CGG 0.339442 2.1:-72366936 None:intergenic
CTGAACTCTCTGGTAGTGAT+AGG 0.345467 2.1:+72369158 MS.gene02301:CDS
ATTACCTCAATGAAAGCCTT+TGG 0.353972 2.1:-72369280 None:intergenic
ATCCTGGGAATATTCTTGTT+CGG 0.355681 2.1:+72369068 MS.gene02301:CDS
TGCATTCTCCCAGCGAAGTT+GGG 0.356054 2.1:+72367223 MS.gene02301:CDS
AGTGTCTCACGTTATGTTGA+TGG 0.359513 2.1:+72368052 MS.gene02301:CDS
TAGTGATAGGGTAAATTTAC+TGG 0.362630 2.1:+72369171 MS.gene02301:CDS
CGCTCTTATTTGCTGGTACC+TGG 0.380022 2.1:+72367173 MS.gene02301:CDS
TACGTGGAAGTGAGTAGAAA+TGG 0.384419 2.1:+72366864 MS.gene02301:CDS
CTTTGCTGCTTAGAGCTGAT+TGG 0.385374 2.1:+72370907 MS.gene02301:CDS
TATAAATGAAGCGGTTCAAA+TGG 0.389020 2.1:-72367937 None:intergenic
AGGTCCTGCTTTCATAAAAT+GGG 0.393124 2.1:+72367481 MS.gene02301:CDS
TGGTGGGTATTTGGTCCAAC+CGG 0.393551 2.1:-72366897 None:intergenic
ACATGTAATTATACCCATCT+TGG 0.394243 2.1:-72367292 None:intergenic
ACAAGTGGATAGACAGGCTT+AGG 0.396500 2.1:-72367989 None:intergenic
AACCGGCAGTGGTGGGTATT+TGG 0.401639 2.1:-72366906 None:intergenic
GATGAACTATGTCACCTTCT+GGG 0.406064 2.1:-72370472 None:intergenic
CTTCCCTAGCAAGGTCAACT+TGG 0.407373 2.1:-72367910 None:intergenic
TTTGCTGCTTAGAGCTGATT+GGG 0.407859 2.1:+72370908 MS.gene02301:CDS
GAAGAGATTCCTGTTGCATC+TGG 0.418717 2.1:+72367662 MS.gene02301:CDS
CGTCATAGAGTTAATATTGA+TGG 0.434073 2.1:+72370533 MS.gene02301:CDS
TTTACGTTCATGATAGTTGA+AGG 0.437184 2.1:+72367320 MS.gene02301:CDS
ATTGGTAGAAACATATGAAA+AGG 0.438740 2.1:+72368024 MS.gene02301:CDS
ACTTGTGCACCCTGCTGTAT+TGG 0.440205 2.1:+72368006 MS.gene02301:CDS
TCATTTATAATTTCCGCAGC+TGG 0.441166 2.1:+72367951 MS.gene02301:CDS
TGGCAGCGAAAGCTTGATCC+TGG 0.443745 2.1:+72370858 MS.gene02301:CDS
TTTCAAATCTGTTGCCCGCC+GGG 0.446800 2.1:+72369198 MS.gene02301:CDS
ATTCATGCAGATATGCATCC+TGG 0.451986 2.1:+72369052 MS.gene02301:CDS
ACTTATACGGCATGTAGAAC+CGG 0.458097 2.1:-72366923 None:intergenic
ATTCTCAGATTGCGTGGAAA+AGG 0.458269 2.1:+72367060 MS.gene02301:CDS
AAATCTGTTGCCCGCCGGGA+TGG 0.459158 2.1:+72369202 MS.gene02301:CDS
TTGGTAGAAACATATGAAAA+GGG 0.459990 2.1:+72368025 MS.gene02301:CDS
AGCAATTACTTGAGAAAGTC+AGG 0.463123 2.1:+72370510 MS.gene02301:CDS
CACCATAAATATGATTGCTC+AGG 0.470184 2.1:+72367130 MS.gene02301:CDS
TTGCATTCTCCCAGCGAAGT+TGG 0.471522 2.1:+72367222 MS.gene02301:CDS
TTAATGTAGCACGGTGCACT+TGG 0.476026 2.1:-72367694 None:intergenic
TGCATCTCCCCAACTTCGCT+GGG 0.476786 2.1:-72367231 None:intergenic
CATGTAATTATACCCATCTT+GGG 0.480516 2.1:-72367291 None:intergenic
TGTTCATTCCCGCTCTTAAG+TGG 0.482039 2.1:+72367840 MS.gene02301:CDS
GATTGCTCAGGCAGTGAGCT+TGG 0.483437 2.1:+72367142 MS.gene02301:CDS
TATGTTTCTACCAATACAGC+AGG 0.484385 2.1:-72368016 None:intergenic
TTGTATATGCGTGCCCAAGA+TGG 0.484797 2.1:+72367278 MS.gene02301:CDS
TTTGGTCCAACCGGGACAAT+CGG 0.486806 2.1:-72366888 None:intergenic
AGCGGTACGGCCATCCCGGC+GGG 0.489699 2.1:-72369212 None:intergenic
TGTCCCAAGTTGACCTTGCT+AGG 0.497358 2.1:+72367906 MS.gene02301:CDS
ACATTAAAATATCGTTATCC+TGG 0.498375 2.1:+72367710 MS.gene02301:CDS
AATTGCTCCATGCACTCTGC+AGG 0.499228 2.1:-72370494 None:intergenic
GCCGTGAAGGTTAGACATCC+TGG 0.500885 2.1:+72367758 MS.gene02301:CDS
TTTCTAACAGGAAGTGGAAG+AGG 0.501398 2.1:+72370430 MS.gene02301:intron
CTGATTGATTCTCCCACACC+AGG 0.506024 2.1:-72367776 None:intergenic
ACCACTGGTGGTTGCCGTGA+AGG 0.510120 2.1:+72367745 MS.gene02301:CDS
GTCCATCAATCGTGTAAGAA+AGG 0.513058 2.1:-72370938 None:intergenic
ACCAGGATGTCTAACCTTCA+CGG 0.516286 2.1:-72367759 None:intergenic
GACCAAATACCCACCACTGC+CGG 0.518056 2.1:+72366904 MS.gene02301:CDS
TAGAAATGGGCCGATTGTCC+CGG 0.519292 2.1:+72366878 MS.gene02301:CDS
TATACAATCCTTCCTGTGGT+TGG 0.519758 2.1:-72367262 None:intergenic
CTGCAGCGGTACGGCCATCC+CGG 0.520825 2.1:-72369216 None:intergenic
AACGGTCCCATCACAATGGT+TGG 0.522108 2.1:-72367389 None:intergenic
GGGTGCACAAGTGGATAGAC+AGG 0.530159 2.1:-72367995 None:intergenic
ACGTGGAAGTGAGTAGAAAT+GGG 0.531630 2.1:+72366865 MS.gene02301:CDS
ATTCACTCCAACCATTGTGA+TGG 0.532321 2.1:+72367382 MS.gene02301:CDS
TGTATATGCGTGCCCAAGAT+GGG 0.535161 2.1:+72367279 MS.gene02301:CDS
GGTGACGACCTTGGTTCTTG+AGG 0.535537 2.1:+72370574 MS.gene02301:CDS
TGCAGAACGTTTCCAACCAC+AGG 0.535550 2.1:+72367250 MS.gene02301:CDS
TCCGTTCATAAAATAAATAG+AGG 0.535725 2.1:+72366837 MS.gene02301:CDS
AAATCTACTACTATCACCAC+TGG 0.538008 2.1:-72367102 None:intergenic
CTTAAGAGCGGGAATGAACA+TGG 0.538208 2.1:-72367837 None:intergenic
TTACACGATTGATGGACTCA+TGG 0.539493 2.1:+72370944 MS.gene02301:CDS
GGCATGACTGCTGAACTCTC+TGG 0.542426 2.1:+72369148 MS.gene02301:CDS
AGTTCATCCTGCAGAGTGCA+TGG 0.544535 2.1:+72370487 MS.gene02301:CDS
AATCTTAACCACTTAAGAGC+GGG 0.544613 2.1:-72367848 None:intergenic
ATAAATGAAGCGGTTCAAAT+GGG 0.546042 2.1:-72367936 None:intergenic
GCATGTAGAACCGGCAGTGG+TGG 0.550140 2.1:-72366914 None:intergenic
TTCACTCCAACCATTGTGAT+GGG 0.551609 2.1:+72367383 MS.gene02301:CDS
TAATCCAAAGGCTTTCATTG+AGG 0.552069 2.1:+72369276 MS.gene02301:CDS
GCATTCTCCCAGCGAAGTTG+GGG 0.555043 2.1:+72367224 MS.gene02301:CDS
CACACCATTCTCAGATTGCG+TGG 0.555938 2.1:+72367054 MS.gene02301:CDS
GTGCGCATTCTGCAGCGGTA+CGG 0.556512 2.1:-72369225 None:intergenic
TACTGTCATGGTGACGACCT+TGG 0.558128 2.1:+72370565 MS.gene02301:CDS
GCAATGCTTCCAGATGCAAC+AGG 0.562469 2.1:-72367671 None:intergenic
TTCCCTAGCAAGGTCAACTT+GGG 0.566297 2.1:-72367909 None:intergenic
GTGTAGCTGAAACTATGCTC+AGG 0.567262 2.1:-72367581 None:intergenic
CTGAGCAATCATATTTATGG+TGG 0.567808 2.1:-72367129 None:intergenic
TTCATGCAGATATGCATCCT+GGG 0.568436 2.1:+72369053 MS.gene02301:CDS
CTTTCATAAAATGGGGTCAG+TGG 0.569229 2.1:+72367489 MS.gene02301:CDS
ATGAACTATGTCACCTTCTG+GGG 0.571340 2.1:-72370471 None:intergenic
ACCTTCACGGCAACCACCAG+TGG 0.571742 2.1:-72367746 None:intergenic
AGGGAAAGCTTTAACAAATG+TGG 0.575031 2.1:+72366987 MS.gene02301:CDS
GGTCCAAAATAATCTGCAAA+CGG 0.575702 2.1:-72367407 None:intergenic
CATGTAGAACCGGCAGTGGT+GGG 0.575943 2.1:-72366913 None:intergenic
TTATAATTTCCGCAGCTGGA+AGG 0.578670 2.1:+72367955 MS.gene02301:CDS
GTGTGGGAGAATCAATCAGA+AGG 0.581866 2.1:+72367780 MS.gene02301:CDS
TGGTAATGTTTGTACTGTCA+TGG 0.583589 2.1:+72370553 MS.gene02301:CDS
CCCCGAACAAGAATATTCCC+AGG 0.587079 2.1:-72369070 None:intergenic
GGTGGGTATTTGGTCCAACC+GGG 0.587788 2.1:-72366896 None:intergenic
AATACAGCAGGGTGCACAAG+TGG 0.588357 2.1:-72368004 None:intergenic
GTCCCAAGTTGACCTTGCTA+GGG 0.588745 2.1:+72367907 MS.gene02301:CDS
AATGGGCAGCTTCCCTAGCA+AGG 0.589522 2.1:-72367919 None:intergenic
CAGCGGTACGGCCATCCCGG+CGG 0.593776 2.1:-72369213 None:intergenic
TGAACTCTCTGGTAGTGATA+GGG 0.595798 2.1:+72369159 MS.gene02301:CDS
AATGGGCCGATTGTCCCGGT+TGG 0.596748 2.1:+72366882 MS.gene02301:CDS
TAATGTAGCACGGTGCACTT+GGG 0.600061 2.1:-72367693 None:intergenic
GGCAGCGAAAGCTTGATCCT+GGG 0.600800 2.1:+72370859 MS.gene02301:CDS
AAGGTTAGACATCCTGGTGT+GGG 0.602666 2.1:+72367764 MS.gene02301:CDS
AGCTGAGTGCATAGATCTCG+AGG 0.605437 2.1:-72367536 None:intergenic
ACGGCATGTAGAACCGGCAG+TGG 0.607529 2.1:-72366917 None:intergenic
TTTCATAAAATGGGGTCAGT+GGG 0.608104 2.1:+72367490 MS.gene02301:CDS
GCTTAGAGCTGATTGGGCAA+AGG 0.614729 2.1:+72370914 MS.gene02301:CDS
ACAGAATTGTCCTAATCCAA+AGG 0.616547 2.1:+72369264 MS.gene02301:CDS
GGGGTCAGTGGGCCGCTACG+CGG 0.616757 2.1:+72367501 MS.gene02301:CDS
AAGAAACATCCTTCCAGCTG+CGG 0.618231 2.1:-72367964 None:intergenic
GTCTGCATCACATCGTACCC+AGG 0.619350 2.1:-72370876 None:intergenic
TGCGGAAATTATAAATGAAG+CGG 0.620081 2.1:-72367946 None:intergenic
TACAGAAAGTACTGTTCCAG+TGG 0.620946 2.1:+72367086 MS.gene02301:CDS
CGCATATACAATCCTTCCTG+TGG 0.621310 2.1:-72367266 None:intergenic
GAAGGTTAGACATCCTGGTG+TGG 0.621587 2.1:+72367763 MS.gene02301:CDS
CAAGTGGATAGACAGGCTTA+GGG 0.625206 2.1:-72367988 None:intergenic
TGGTAAACAAGCAAAACCAC+TGG 0.628724 2.1:+72367730 MS.gene02301:CDS
AATAATTACCTCAAGAACCA+AGG 0.630120 2.1:-72370582 None:intergenic
TGAGCAATCATATTTATGGT+GGG 0.639230 2.1:-72367128 None:intergenic
GAACGTTTCCAACCACAGGA+AGG 0.642315 2.1:+72367254 MS.gene02301:CDS
CCTGGGAATATTCTTGTTCG+GGG 0.646006 2.1:+72369070 MS.gene02301:CDS
AATAAATAGAGGCAGATACG+TGG 0.651014 2.1:+72366848 MS.gene02301:CDS
TGCAAACGGTCCCATCACAA+TGG 0.656016 2.1:-72367393 None:intergenic
TAATCTTAACCACTTAAGAG+CGG 0.658895 2.1:-72367849 None:intergenic
ACTGAGTGCGCATTCTGCAG+CGG 0.662239 2.1:-72369230 None:intergenic
GGTCCTGCTTTCATAAAATG+GGG 0.673913 2.1:+72367482 MS.gene02301:CDS
ACGTCTAAGAAAATTACATG+AGG 0.681342 2.1:-72369124 None:intergenic
TGTGGGAGAATCAATCAGAA+GGG 0.688516 2.1:+72367781 MS.gene02301:CDS
TAAACAAGCAAAACCACTGG+TGG 0.694708 2.1:+72367733 MS.gene02301:CDS
ATGTTTCTACCAATACAGCA+GGG 0.721417 2.1:-72368015 None:intergenic
CTAGTGTTCGATGAACAACG+CGG 0.805665 2.1:-72367451 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATAAAGTTACAAATATT+AGG - chr2.1:72370829-72370848 None:intergenic 10.0%
!!! ATTTTTTTTTTTTATTCAAG+CGG + chr2.1:72368860-72368879 MS.gene02301:intron 10.0%
!! AATCATTTAAATCTACAATT+AGG - chr2.1:72370189-72370208 None:intergenic 15.0%
!! AATTCTTCACATATAAATAT+AGG - chr2.1:72370146-72370165 None:intergenic 15.0%
!! ATAAAAAAAAAAAATCCCAT+TGG - chr2.1:72368855-72368874 None:intergenic 15.0%
!! GAATATAAAATAAGAAATGA+TGG - chr2.1:72370244-72370263 None:intergenic 15.0%
!! TTCAAAATTGTCAAAAATTT+CGG - chr2.1:72367645-72367664 None:intergenic 15.0%
!! TTTAATACATATACAAACAA+AGG + chr2.1:72369806-72369825 MS.gene02301:intron 15.0%
!!! AAAAAATGTTTTAGATTTAG+AGG - chr2.1:72368929-72368948 None:intergenic 15.0%
!!! TAAAACATTTTTTGTATCTA+CGG + chr2.1:72368936-72368955 MS.gene02301:intron 15.0%
!!! TTGTAACTTTATAATTTGTA+GGG + chr2.1:72370834-72370853 MS.gene02301:intron 15.0%
!!! TTTGTAACTTTATAATTTGT+AGG + chr2.1:72370833-72370852 MS.gene02301:intron 15.0%
!! AAAAAATCGATAATCTAAGT+TGG - chr2.1:72369315-72369334 None:intergenic 20.0%
!! AAGTTAGTAGTATTAATTAG+GGG - chr2.1:72369763-72369782 None:intergenic 20.0%
!! ACAAGTTAGTAGTATTAATT+AGG - chr2.1:72369765-72369784 None:intergenic 20.0%
!! ATTAGATAAACAAGTTATCT+TGG - chr2.1:72368492-72368511 None:intergenic 20.0%
!! CAAGTTAGTAGTATTAATTA+GGG - chr2.1:72369764-72369783 None:intergenic 20.0%
!! TCAAAAAAAATTACATTGTG+AGG - chr2.1:72368270-72368289 None:intergenic 20.0%
!! TCAAAATTGTCAAAAATTTC+GGG - chr2.1:72367644-72367663 None:intergenic 20.0%
!! TTAAAATTACTGCTTACAAA+GGG - chr2.1:72368970-72368989 None:intergenic 20.0%
!! TTTAAATGATTTATTGTGCA+TGG + chr2.1:72370198-72370217 MS.gene02301:intron 20.0%
!!! ATAAAAACGAAGTGTTATAA+AGG + chr2.1:72368240-72368259 MS.gene02301:intron 20.0%
!!! ATATTTAGCTTTCCTTTTTA+AGG + chr2.1:72368781-72368800 MS.gene02301:intron 20.0%
!!! ATTATTTTGGACCAAATTTT+AGG + chr2.1:72367417-72367436 MS.gene02301:CDS 20.0%
!!! GTAAGCAGTAATTTTAAATT+TGG + chr2.1:72368973-72368992 MS.gene02301:intron 20.0%
!!! TATTTAGCTTTCCTTTTTAA+GGG + chr2.1:72368782-72368801 MS.gene02301:intron 20.0%
!!! TTTAAAATTACTGCTTACAA+AGG - chr2.1:72368971-72368990 None:intergenic 20.0%
!!! TTTTTTTCCTTTTTGTGAAA+GGG + chr2.1:72369564-72369583 MS.gene02301:intron 20.0%
! AAAAACTAAAGTTTAACTGC+AGG - chr2.1:72369604-72369623 None:intergenic 25.0%
! AAGAAATGTGAAAAAAGCAA+AGG + chr2.1:72369888-72369907 MS.gene02301:intron 25.0%
! ACATTAAAATATCGTTATCC+TGG + chr2.1:72367710-72367729 MS.gene02301:CDS 25.0%
! AGAAATGTGAAAAAAGCAAA+GGG + chr2.1:72369889-72369908 MS.gene02301:intron 25.0%
! ATGCATCTAGTAATTTGAAA+AGG - chr2.1:72369717-72369736 None:intergenic 25.0%
! ATGTGAAGAATTACTGTAAT+AGG + chr2.1:72370154-72370173 MS.gene02301:intron 25.0%
! ATTGGTAGAAACATATGAAA+AGG + chr2.1:72368024-72368043 MS.gene02301:CDS 25.0%
! CAAAAATAAAGTCAAATGAG+TGG - chr2.1:72369678-72369697 None:intergenic 25.0%
! CAAATATTAGGTAAGTACAA+TGG - chr2.1:72370817-72370836 None:intergenic 25.0%
! CTATATCTTGACAAAGAAAA+CGG - chr2.1:72368574-72368593 None:intergenic 25.0%
! CTTTCACAAAAAGGAAAAAA+AGG - chr2.1:72369565-72369584 None:intergenic 25.0%
! GAGTATATAAAAAGAGATTG+TGG - chr2.1:72369636-72369655 None:intergenic 25.0%
! GCTTCATTATGAAACTTATA+CGG - chr2.1:72366939-72366958 None:intergenic 25.0%
! GTAACAAATAACAGATATCT+GGG - chr2.1:72368891-72368910 None:intergenic 25.0%
! GTTATTCAATCAAGTAATGT+TGG + chr2.1:72370293-72370312 MS.gene02301:intron 25.0%
! TATACAAACAAAGGACAATA+TGG + chr2.1:72369815-72369834 MS.gene02301:intron 25.0%
! TCCGTTCATAAAATAAATAG+AGG + chr2.1:72366837-72366856 MS.gene02301:CDS 25.0%
! TGCATCTAGTAATTTGAAAA+GGG - chr2.1:72369716-72369735 None:intergenic 25.0%
! TGTAACAAATAACAGATATC+TGG - chr2.1:72368892-72368911 None:intergenic 25.0%
! TTGGTAGAAACATATGAAAA+GGG + chr2.1:72368025-72368044 MS.gene02301:CDS 25.0%
! TTTAAATCTGCGTCAAATAT+AGG - chr2.1:72370045-72370064 None:intergenic 25.0%
!! AACTTTATAATTTGTAGGGT+TGG + chr2.1:72370838-72370857 MS.gene02301:intron 25.0%
!! ACATTGCTATCATATAGTTT+TGG + chr2.1:72368179-72368198 MS.gene02301:intron 25.0%
!! ATAATTAGGGTATTCTAACT+GGG + chr2.1:72369518-72369537 MS.gene02301:intron 25.0%
!! ATTTGACATTATTTGCTGAA+GGG - chr2.1:72370322-72370341 None:intergenic 25.0%
!! TATTAATTAGGGGTATGTTT+AGG - chr2.1:72369753-72369772 None:intergenic 25.0%
!! TATTTGACATTATTTGCTGA+AGG - chr2.1:72370323-72370342 None:intergenic 25.0%
!!! AACGATATTTTAATGTAGCA+CGG - chr2.1:72367706-72367725 None:intergenic 25.0%
!!! ATTTATTTTATGAACGGACT+GGG - chr2.1:72366835-72366854 None:intergenic 25.0%
!!! CTTTTTTTCCTTTTTGTGAA+AGG + chr2.1:72369563-72369582 MS.gene02301:intron 25.0%
!!! GCCTCTATTTATTTTATGAA+CGG - chr2.1:72366841-72366860 None:intergenic 25.0%
!!! GGATTGATGAATGAATTTTT+TGG + chr2.1:72368414-72368433 MS.gene02301:intron 25.0%
!!! GGATTTTGCTATTATCAATA+CGG + chr2.1:72367802-72367821 MS.gene02301:CDS 25.0%
!!! TATTTATTTTATGAACGGAC+TGG - chr2.1:72366836-72366855 None:intergenic 25.0%
!!! TGCGTTAAAATTTGTTAGTT+TGG + chr2.1:72369995-72370014 MS.gene02301:intron 25.0%
!!! TTATCGATTTTTTTTCCTGT+AGG + chr2.1:72369322-72369341 MS.gene02301:intron 25.0%
AAGTTCCAATTCTTCTATGT+TGG - chr2.1:72370763-72370782 None:intergenic 30.0%
AATAATTACCTCAAGAACCA+AGG - chr2.1:72370585-72370604 None:intergenic 30.0%
ACAAAAAGGAAAAAAAGGAG+AGG - chr2.1:72369560-72369579 None:intergenic 30.0%
ACAAATCAACAATGTCCAAA+AGG - chr2.1:72368212-72368231 None:intergenic 30.0%
ACATGTAATTATACCCATCT+TGG - chr2.1:72367295-72367314 None:intergenic 30.0%
ACGTCTAAGAAAATTACATG+AGG - chr2.1:72369127-72369146 None:intergenic 30.0%
AGAATGTAATTCAGTGATTG+TGG + chr2.1:72369366-72369385 MS.gene02301:intron 30.0%
AGAGAAATTGTTAGTCCATT+TGG + chr2.1:72368352-72368371 MS.gene02301:intron 30.0%
AGCCATAGTTTCCTAAAATT+TGG - chr2.1:72367431-72367450 None:intergenic 30.0%
AGTAAATCCCTTTCACAAAA+AGG - chr2.1:72369574-72369593 None:intergenic 30.0%
AGTCAACAACTAGCATAATT+AGG + chr2.1:72369504-72369523 MS.gene02301:intron 30.0%
ATAAAAAGAGATTGTGGTAC+TGG - chr2.1:72369630-72369649 None:intergenic 30.0%
ATAAATGAAGCGGTTCAAAT+GGG - chr2.1:72367939-72367958 None:intergenic 30.0%
CAAATGAGTGGTTAGATATA+GGG - chr2.1:72369666-72369685 None:intergenic 30.0%
CAGTAAAATTACTCATACCA+AGG - chr2.1:72368733-72368752 None:intergenic 30.0%
CATGTAAATGCAAAAATACC+AGG - chr2.1:72367194-72367213 None:intergenic 30.0%
CATGTAATTATACCCATCTT+GGG - chr2.1:72367294-72367313 None:intergenic 30.0%
CGTCATAGAGTTAATATTGA+TGG + chr2.1:72370533-72370552 MS.gene02301:CDS 30.0%
GATCATTATTACAAAGACCT+TGG + chr2.1:72368713-72368732 MS.gene02301:intron 30.0%
GCATCTAGTAATTTGAAAAG+GGG - chr2.1:72369715-72369734 None:intergenic 30.0%
GTCAACAACTAGCATAATTA+GGG + chr2.1:72369505-72369524 MS.gene02301:intron 30.0%
TAATCTTAACCACTTAAGAG+CGG - chr2.1:72367852-72367871 None:intergenic 30.0%
TAGTGATAGGGTAAATTTAC+TGG + chr2.1:72369171-72369190 MS.gene02301:CDS 30.0%
TATAAATGAAGCGGTTCAAA+TGG - chr2.1:72367940-72367959 None:intergenic 30.0%
TCAAATGAGTGGTTAGATAT+AGG - chr2.1:72369667-72369686 None:intergenic 30.0%
TCACATGATATTAAGGAACA+TGG - chr2.1:72370621-72370640 None:intergenic 30.0%
TCTAATAAGCAAGTGTGAAT+CGG + chr2.1:72368506-72368525 MS.gene02301:intron 30.0%
TGAAAAGGGGTTTAGATTTA+GGG - chr2.1:72369702-72369721 None:intergenic 30.0%
TGAGCAATCATATTTATGGT+GGG - chr2.1:72367131-72367150 None:intergenic 30.0%
TGCGGAAATTATAAATGAAG+CGG - chr2.1:72367949-72367968 None:intergenic 30.0%
TTGAAAAGGGGTTTAGATTT+AGG - chr2.1:72369703-72369722 None:intergenic 30.0%
TTTACGTTCATGATAGTTGA+AGG + chr2.1:72367320-72367339 MS.gene02301:CDS 30.0%
! CAAAAATTTCGGGAAGTTTT+CGG - chr2.1:72367634-72367653 None:intergenic 30.0%
! CATAATTAGGGTATTCTAAC+TGG + chr2.1:72369517-72369536 MS.gene02301:intron 30.0%
! CATGTAATTTTCTTAGACGT+AGG + chr2.1:72369127-72369146 MS.gene02301:CDS 30.0%
!! AATTTGTTAGTTTGGTACCT+TGG + chr2.1:72370003-72370022 MS.gene02301:intron 30.0%
!! GACCAAATTTTAGGAAACTA+TGG + chr2.1:72367426-72367445 MS.gene02301:CDS 30.0%
!! GGTATTTTTGCATTTACATG+TGG + chr2.1:72367194-72367213 MS.gene02301:CDS 30.0%
!!! ATCCTTTTTAAAACAGACTC+TGG + chr2.1:72368604-72368623 MS.gene02301:intron 30.0%
!!! TCGGTTAAATGCTTTTTCAA+TGG - chr2.1:72367615-72367634 None:intergenic 30.0%
!!! TTTCCTCTTTGTTTTCTAAC+AGG + chr2.1:72370418-72370437 MS.gene02301:intron 30.0%
AAATCTACTACTATCACCAC+TGG - chr2.1:72367105-72367124 None:intergenic 35.0%
AAATCTGCTCTTGCTCATAT+TGG + chr2.1:72368097-72368116 MS.gene02301:CDS 35.0%
AATAAATAGAGGCAGATACG+TGG + chr2.1:72366848-72366867 MS.gene02301:CDS 35.0%
AATCTGCTCTTGCTCATATT+GGG + chr2.1:72368098-72368117 MS.gene02301:CDS 35.0%
AATCTTAACCACTTAAGAGC+GGG - chr2.1:72367851-72367870 None:intergenic 35.0%
AATGTGAAAAAAGCAAAGGG+AGG + chr2.1:72369892-72369911 MS.gene02301:intron 35.0%
ACACATAGATATGCATGATC+AGG + chr2.1:72368450-72368469 MS.gene02301:intron 35.0%
ACAGAATTGTCCTAATCCAA+AGG + chr2.1:72369264-72369283 MS.gene02301:CDS 35.0%
ACCTGAAAGAAAACATTGCA+TGG - chr2.1:72369022-72369041 None:intergenic 35.0%
AGCAATTACTTGAGAAAGTC+AGG + chr2.1:72370510-72370529 MS.gene02301:CDS 35.0%
AGGTCCTGCTTTCATAAAAT+GGG + chr2.1:72367481-72367500 MS.gene02301:CDS 35.0%
ATCCTGGGAATATTCTTGTT+CGG + chr2.1:72369068-72369087 MS.gene02301:CDS 35.0%
ATTACCTCAATGAAAGCCTT+TGG - chr2.1:72369283-72369302 None:intergenic 35.0%
CACCATAAATATGATTGCTC+AGG + chr2.1:72367130-72367149 MS.gene02301:CDS 35.0%
CTGAGATTGTTTAAGTAGCA+TGG + chr2.1:72368393-72368412 MS.gene02301:intron 35.0%
CTGAGCAATCATATTTATGG+TGG - chr2.1:72367132-72367151 None:intergenic 35.0%
CTTCCTGTTAGAAAACAAAG+AGG - chr2.1:72370424-72370443 None:intergenic 35.0%
GGAAAAAAAGGAGAGGAATT+TGG - chr2.1:72369553-72369572 None:intergenic 35.0%
GGTCCAAAATAATCTGCAAA+CGG - chr2.1:72367410-72367429 None:intergenic 35.0%
TAATCCAAAGGCTTTCATTG+AGG + chr2.1:72369276-72369295 MS.gene02301:CDS 35.0%
TCAATGAAAGCCTTTGGATT+AGG - chr2.1:72369277-72369296 None:intergenic 35.0%
TCATTTATAATTTCCGCAGC+TGG + chr2.1:72367951-72367970 MS.gene02301:CDS 35.0%
TGCACATTTATCTGCGTTTA+AGG - chr2.1:72370082-72370101 None:intergenic 35.0%
TGCCTGAGCAATCATATTTA+TGG - chr2.1:72367135-72367154 None:intergenic 35.0%
TGTGTGCAACTGAAACTATA+GGG + chr2.1:72368659-72368678 MS.gene02301:intron 35.0%
TTGTGCCAACATAGAAGAAT+TGG + chr2.1:72370755-72370774 MS.gene02301:intron 35.0%
TTGTGTGCAACTGAAACTAT+AGG + chr2.1:72368658-72368677 MS.gene02301:intron 35.0%
TTTCATAAAATGGGGTCAGT+GGG + chr2.1:72367490-72367509 MS.gene02301:CDS 35.0%
! ACCATGCAATGTTTTCTTTC+AGG + chr2.1:72369018-72369037 MS.gene02301:intron 35.0%
! AGGGAAAGCTTTAACAAATG+TGG + chr2.1:72366987-72367006 MS.gene02301:CDS 35.0%
! ATGCAATGTTTTCTTTCAGG+TGG + chr2.1:72369021-72369040 MS.gene02301:intron 35.0%
! ATGTTTCTACCAATACAGCA+GGG - chr2.1:72368018-72368037 None:intergenic 35.0%
! TATGTTTCTACCAATACAGC+AGG - chr2.1:72368019-72368038 None:intergenic 35.0%
! TATTGGCTGACTGAAAACTA+GGG + chr2.1:72370661-72370680 MS.gene02301:intron 35.0%
! TGAAGCACGTAGTTCATTTT+TGG + chr2.1:72366953-72366972 MS.gene02301:CDS 35.0%
! TGGTAATGTTTGTACTGTCA+TGG + chr2.1:72370553-72370572 MS.gene02301:CDS 35.0%
!! AAGCACGTAGTTCATTTTTG+GGG + chr2.1:72366955-72366974 MS.gene02301:CDS 35.0%
!! AAGGTTTTGTCTTATTAGCG+AGG + chr2.1:72367339-72367358 MS.gene02301:CDS 35.0%
!! AGCTTTCCTTTTTAAGGGTA+TGG + chr2.1:72368787-72368806 MS.gene02301:intron 35.0%
!! AGGTTTTGTCTTATTAGCGA+GGG + chr2.1:72367340-72367359 MS.gene02301:CDS 35.0%
!! ATTTAAGTTGCAACTGCCAA+TGG + chr2.1:72368836-72368855 MS.gene02301:intron 35.0%
!! GAAGCACGTAGTTCATTTTT+GGG + chr2.1:72366954-72366973 MS.gene02301:CDS 35.0%
!! TTTAAGTTGCAACTGCCAAT+GGG + chr2.1:72368837-72368856 MS.gene02301:intron 35.0%
!!! AGCCAGAGTCTGTTTTAAAA+AGG - chr2.1:72368609-72368628 None:intergenic 35.0%
!!! AGTTTTGGATAGAGTCCTTT+TGG + chr2.1:72368194-72368213 MS.gene02301:intron 35.0%
!!! CGTTATGTTGATGGTTTTCA+AGG + chr2.1:72368061-72368080 MS.gene02301:CDS 35.0%
!!! CTCACATAGTTTTGTTTGGT+GGG + chr2.1:72370113-72370132 MS.gene02301:intron 35.0%
!!! CTGTCTCACATAGTTTTGTT+TGG + chr2.1:72370109-72370128 MS.gene02301:intron 35.0%
!!! CTTTGTTTTCTAACAGGAAG+TGG + chr2.1:72370424-72370443 MS.gene02301:intron 35.0%
!!! GAAGAGGCATTTACTTTTTG+GGG + chr2.1:72370446-72370465 MS.gene02301:CDS 35.0%
!!! GCACTTGTCATTTTTCCAAA+TGG - chr2.1:72368370-72368389 None:intergenic 35.0%
!!! GGAAGAGGCATTTACTTTTT+GGG + chr2.1:72370445-72370464 MS.gene02301:CDS 35.0%
!!! TCTCACATAGTTTTGTTTGG+TGG + chr2.1:72370112-72370131 MS.gene02301:intron 35.0%
!!! TGGAAGAGGCATTTACTTTT+TGG + chr2.1:72370444-72370463 MS.gene02301:CDS 35.0%
ACGACATAACATGTGAACAG+AGG - chr2.1:72369443-72369462 None:intergenic 40.0%
ACGTCAAACAGAGGAACAAA+GGG - chr2.1:72369416-72369435 None:intergenic 40.0%
ACGTGGAAGTGAGTAGAAAT+GGG + chr2.1:72366865-72366884 MS.gene02301:CDS 40.0%
ACTTATACGGCATGTAGAAC+CGG - chr2.1:72366926-72366945 None:intergenic 40.0%
AGATCTCGAGGAAAAAGATC+AGG - chr2.1:72367527-72367546 None:intergenic 40.0%
AGCAAAGGGAGGTTACATTA+AGG + chr2.1:72369903-72369922 MS.gene02301:intron 40.0%
AGCCAATACTTGTAACTGGT+AGG - chr2.1:72370649-72370668 None:intergenic 40.0%
AGTCAGCCAATACTTGTAAC+TGG - chr2.1:72370653-72370672 None:intergenic 40.0%
AGTGTCTCACGTTATGTTGA+TGG + chr2.1:72368052-72368071 MS.gene02301:CDS 40.0%
ATACTTGTAACTGGTAGGTG+TGG - chr2.1:72370644-72370663 None:intergenic 40.0%
ATCGTGCAAGATCATAGTCA+AGG - chr2.1:72370387-72370406 None:intergenic 40.0%
ATGAACTATGTCACCTTCTG+GGG - chr2.1:72370474-72370493 None:intergenic 40.0%
ATTCACTCCAACCATTGTGA+TGG + chr2.1:72367382-72367401 MS.gene02301:CDS 40.0%
ATTCATGCAGATATGCATCC+TGG + chr2.1:72369052-72369071 MS.gene02301:CDS 40.0%
ATTCTCAGATTGCGTGGAAA+AGG + chr2.1:72367060-72367079 MS.gene02301:CDS 40.0%
CACCTACCAGTTACAAGTAT+TGG + chr2.1:72370644-72370663 MS.gene02301:intron 40.0%
CAGGTCCTGCTTTCATAAAA+TGG + chr2.1:72367480-72367499 MS.gene02301:CDS 40.0%
CATCGAACACTAGAAAAAGC+AGG + chr2.1:72367461-72367480 MS.gene02301:CDS 40.0%
CTGAAACTATAGGGTGGTAT+AGG + chr2.1:72368668-72368687 MS.gene02301:intron 40.0%
CTGGATCCATACCCTTAAAA+AGG - chr2.1:72368796-72368815 None:intergenic 40.0%
CTTGAGAGGAACACACAAAA+AGG - chr2.1:72369486-72369505 None:intergenic 40.0%
CTTTCATAAAATGGGGTCAG+TGG + chr2.1:72367489-72367508 MS.gene02301:CDS 40.0%
GACCTTTCTTACACGATTGA+TGG + chr2.1:72370936-72370955 MS.gene02301:CDS 40.0%
GATGAACTATGTCACCTTCT+GGG - chr2.1:72370475-72370494 None:intergenic 40.0%
GCAAAGGGAGGTTACATTAA+GGG + chr2.1:72369904-72369923 MS.gene02301:intron 40.0%
GGTCCTGCTTTCATAAAATG+GGG + chr2.1:72367482-72367501 MS.gene02301:CDS 40.0%
GGTGTGGTCACATGATATTA+AGG - chr2.1:72370628-72370647 None:intergenic 40.0%
GTCCATCAATCGTGTAAGAA+AGG - chr2.1:72370941-72370960 None:intergenic 40.0%
TAAACAAGCAAAACCACTGG+TGG + chr2.1:72367733-72367752 MS.gene02301:CDS 40.0%
TACGTGGAAGTGAGTAGAAA+TGG + chr2.1:72366864-72366883 MS.gene02301:CDS 40.0%
TATACAATCCTTCCTGTGGT+TGG - chr2.1:72367265-72367284 None:intergenic 40.0%
TCCTGGGAATATTCTTGTTC+GGG + chr2.1:72369069-72369088 MS.gene02301:CDS 40.0%
TGAGTGGTTAGATATAGGGA+CGG - chr2.1:72369662-72369681 None:intergenic 40.0%
TGATTTATTGTGCATGGCTG+TGG + chr2.1:72370204-72370223 MS.gene02301:intron 40.0%
TGGTAAACAAGCAAAACCAC+TGG + chr2.1:72367730-72367749 MS.gene02301:CDS 40.0%
TGTGGGAGAATCAATCAGAA+GGG + chr2.1:72367781-72367800 MS.gene02301:CDS 40.0%
TTATAATTTCCGCAGCTGGA+AGG + chr2.1:72367955-72367974 MS.gene02301:CDS 40.0%
TTCACTCCAACCATTGTGAT+GGG + chr2.1:72367383-72367402 MS.gene02301:CDS 40.0%
TTCATGCAGATATGCATCCT+GGG + chr2.1:72369053-72369072 MS.gene02301:CDS 40.0%
TTTCTAACAGGAAGTGGAAG+AGG + chr2.1:72370430-72370449 MS.gene02301:intron 40.0%
! GGACCGTTTGCAGATTATTT+TGG + chr2.1:72367404-72367423 MS.gene02301:CDS 40.0%
! TGAACTCTCTGGTAGTGATA+GGG + chr2.1:72369159-72369178 MS.gene02301:CDS 40.0%
! TGACCCCATTTTATGAAAGC+AGG - chr2.1:72367488-72367507 None:intergenic 40.0%
! TTGTTAGTTTGGTACCTTGG+AGG + chr2.1:72370006-72370025 MS.gene02301:intron 40.0%
! TTTGACTCGCTCTTATTTGC+TGG + chr2.1:72367166-72367185 MS.gene02301:CDS 40.0%
! TTTGCTGCTTAGAGCTGATT+GGG + chr2.1:72370908-72370927 MS.gene02301:CDS 40.0%
! TTTTCCACGCAATCTGAGAA+TGG - chr2.1:72367061-72367080 None:intergenic 40.0%
!! AGTGGTTTTGCTTGTTTACC+AGG - chr2.1:72367731-72367750 None:intergenic 40.0%
!! ATGCTAGTTGTTGACTTGAG+AGG - chr2.1:72369500-72369519 None:intergenic 40.0%
!! GTATTGGCTGACTGAAAACT+AGG + chr2.1:72370660-72370679 MS.gene02301:intron 40.0%
!! TACAGAAAGTACTGTTCCAG+TGG + chr2.1:72367086-72367105 MS.gene02301:CDS 40.0%
!! TGCACTTTTGAAGATGCTTC+TGG + chr2.1:72368126-72368145 MS.gene02301:CDS 40.0%
!! TTACACGATTGATGGACTCA+TGG + chr2.1:72370944-72370963 MS.gene02301:CDS 40.0%
!!! ATTTTTGGGGCTTGCAACAA+GGG + chr2.1:72366968-72366987 MS.gene02301:CDS 40.0%
AAAAGGAGAGGAATTTGGCC+TGG - chr2.1:72369548-72369567 None:intergenic 45.0%
AAAGGTTCAGCGAGGAAACA+AGG - chr2.1:72369468-72369487 None:intergenic 45.0%
AAGAAACATCCTTCCAGCTG+CGG - chr2.1:72367967-72367986 None:intergenic 45.0%
AAGGTTAGACATCCTGGTGT+GGG + chr2.1:72367764-72367783 MS.gene02301:CDS 45.0%
ACAAGTGGATAGACAGGCTT+AGG - chr2.1:72367992-72368011 None:intergenic 45.0%
ACACACAAAAAGGTTCAGCG+AGG - chr2.1:72369476-72369495 None:intergenic 45.0%
ACAGAGGAACAAAGGGAAGA+AGG - chr2.1:72369409-72369428 None:intergenic 45.0%
ACCAGGATGTCTAACCTTCA+CGG - chr2.1:72367762-72367781 None:intergenic 45.0%
AGGGAGGTTACATTAAGGGA+CGG + chr2.1:72369908-72369927 MS.gene02301:intron 45.0%
AGGTTACATTAAGGGACGGA+GGG + chr2.1:72369912-72369931 MS.gene02301:intron 45.0%
CAAGTGGATAGACAGGCTTA+GGG - chr2.1:72367991-72368010 None:intergenic 45.0%
CACGTCAAACAGAGGAACAA+AGG - chr2.1:72369417-72369436 None:intergenic 45.0%
CAGAGGAACAAAGGGAAGAA+GGG - chr2.1:72369408-72369427 None:intergenic 45.0%
CCTGGGAATATTCTTGTTCG+GGG + chr2.1:72369070-72369089 MS.gene02301:CDS 45.0%
CGCATATACAATCCTTCCTG+TGG - chr2.1:72367269-72367288 None:intergenic 45.0%
CTAGTGTTCGATGAACAACG+CGG - chr2.1:72367454-72367473 None:intergenic 45.0%
CTTAAGAGCGGGAATGAACA+TGG - chr2.1:72367840-72367859 None:intergenic 45.0%
CTTTGTTCCTCTGTTTGACG+TGG + chr2.1:72369415-72369434 MS.gene02301:intron 45.0%
GAAGAGATTCCTGTTGCATC+TGG + chr2.1:72367662-72367681 MS.gene02301:CDS 45.0%
GCTCTTCGTTGGGATTAGAA+AGG + chr2.1:72368632-72368651 MS.gene02301:intron 45.0%
GGATGAACTATGTCACCTTC+TGG - chr2.1:72370476-72370495 None:intergenic 45.0%
GTGCAACTGAAACTATAGGG+TGG + chr2.1:72368662-72368681 MS.gene02301:intron 45.0%
GTGTAGCTGAAACTATGCTC+AGG - chr2.1:72367584-72367603 None:intergenic 45.0%
GTGTGGGAGAATCAATCAGA+AGG + chr2.1:72367780-72367799 MS.gene02301:CDS 45.0%
TAATGTAGCACGGTGCACTT+GGG - chr2.1:72367696-72367715 None:intergenic 45.0%
TGGTTAGATATAGGGACGGA+GGG - chr2.1:72369658-72369677 None:intergenic 45.0%
TGTATATGCGTGCCCAAGAT+GGG + chr2.1:72367279-72367298 MS.gene02301:CDS 45.0%
TGTTCATTCCCGCTCTTAAG+TGG + chr2.1:72367840-72367859 MS.gene02301:CDS 45.0%
TTAATGTAGCACGGTGCACT+TGG - chr2.1:72367697-72367716 None:intergenic 45.0%
TTCCCTAGCAAGGTCAACTT+GGG - chr2.1:72367912-72367931 None:intergenic 45.0%
TTGTATATGCGTGCCCAAGA+TGG + chr2.1:72367278-72367297 MS.gene02301:CDS 45.0%
! CTGAACTCTCTGGTAGTGAT+AGG + chr2.1:72369158-72369177 MS.gene02301:CDS 45.0%
! CTTTGCTGCTTAGAGCTGAT+TGG + chr2.1:72370907-72370926 MS.gene02301:CDS 45.0%
! TCACTCTCTAAAAGTCCAGC+TGG - chr2.1:72368815-72368834 None:intergenic 45.0%
! TTTAAGGGTATGGATCCAGC+TGG + chr2.1:72368797-72368816 MS.gene02301:intron 45.0%
! TTTTCAAATCTGTTGCCCGC+CGG + chr2.1:72369197-72369216 MS.gene02301:CDS 45.0%
!!! CATTTTTGGGGCTTGCAACA+AGG + chr2.1:72366967-72366986 MS.gene02301:CDS 45.0%
AAAAAGATCAGGCCGCGTAG+CGG - chr2.1:72367516-72367535 None:intergenic 50.0%
AACGGTCCCATCACAATGGT+TGG - chr2.1:72367392-72367411 None:intergenic 50.0%
AATACAGCAGGGTGCACAAG+TGG - chr2.1:72368007-72368026 None:intergenic 50.0%
AATGTGAGCAGTGAGCCTAC+AGG - chr2.1:72369340-72369359 None:intergenic 50.0%
AATTGCTCCATGCACTCTGC+AGG - chr2.1:72370497-72370516 None:intergenic 50.0%
ACTTGTGCACCCTGCTGTAT+TGG + chr2.1:72368006-72368025 MS.gene02301:CDS 50.0%
AGAGGAACCACGTCAAACAG+AGG - chr2.1:72369425-72369444 None:intergenic 50.0%
AGCTGAGTGCATAGATCTCG+AGG - chr2.1:72367539-72367558 None:intergenic 50.0%
AGTTCATCCTGCAGAGTGCA+TGG + chr2.1:72370487-72370506 MS.gene02301:CDS 50.0%
CACACCATTCTCAGATTGCG+TGG + chr2.1:72367054-72367073 MS.gene02301:CDS 50.0%
CCCCGAACAAGAATATTCCC+AGG - chr2.1:72369073-72369092 None:intergenic 50.0%
CTTCCCTAGCAAGGTCAACT+TGG - chr2.1:72367913-72367932 None:intergenic 50.0%
GAACGTTTCCAACCACAGGA+AGG + chr2.1:72367254-72367273 MS.gene02301:CDS 50.0%
GAAGGTTAGACATCCTGGTG+TGG + chr2.1:72367763-72367782 MS.gene02301:CDS 50.0%
GAATCAGTCCAAAGCCTCCA+AGG - chr2.1:72370023-72370042 None:intergenic 50.0%
GAGGTTACATTAAGGGACGG+AGG + chr2.1:72369911-72369930 MS.gene02301:intron 50.0%
GCAATGCTTCCAGATGCAAC+AGG - chr2.1:72367674-72367693 None:intergenic 50.0%
GCTTAGAGCTGATTGGGCAA+AGG + chr2.1:72370914-72370933 MS.gene02301:CDS 50.0%
GTATTCTAACTGGGCCAACC+AGG + chr2.1:72369527-72369546 MS.gene02301:intron 50.0%
GTGGTTAGATATAGGGACGG+AGG - chr2.1:72369659-72369678 None:intergenic 50.0%
GTTTGGTACCTTGGAGGCTT+TGG + chr2.1:72370012-72370031 MS.gene02301:intron 50.0%
TAGAAATGGGCCGATTGTCC+CGG + chr2.1:72366878-72366897 MS.gene02301:CDS 50.0%
TGCAAACGGTCCCATCACAA+TGG - chr2.1:72367396-72367415 None:intergenic 50.0%
TGCAGAACGTTTCCAACCAC+AGG + chr2.1:72367250-72367269 MS.gene02301:CDS 50.0%
TGCATTCTCCCAGCGAAGTT+GGG + chr2.1:72367223-72367242 MS.gene02301:CDS 50.0%
TTGCATTCTCCCAGCGAAGT+TGG + chr2.1:72367222-72367241 MS.gene02301:CDS 50.0%
TTTCAAATCTGTTGCCCGCC+GGG + chr2.1:72369198-72369217 MS.gene02301:CDS 50.0%
TTTGGTCCAACCGGGACAAT+CGG - chr2.1:72366891-72366910 None:intergenic 50.0%
! CGCTCTTATTTGCTGGTACC+TGG + chr2.1:72367173-72367192 MS.gene02301:CDS 50.0%
! CTGATTGATTCTCCCACACC+AGG - chr2.1:72367779-72367798 None:intergenic 50.0%
! GTCCCAAGTTGACCTTGCTA+GGG + chr2.1:72367907-72367926 MS.gene02301:CDS 50.0%
! TACTGTCATGGTGACGACCT+TGG + chr2.1:72370565-72370584 MS.gene02301:CDS 50.0%
! TGGTGGGTATTTGGTCCAAC+CGG - chr2.1:72366900-72366919 None:intergenic 50.0%
! TGTCCCAAGTTGACCTTGCT+AGG + chr2.1:72367906-72367925 MS.gene02301:CDS 50.0%
AATGGGCAGCTTCCCTAGCA+AGG - chr2.1:72367922-72367941 None:intergenic 55.0%
ACTGAGTGCGCATTCTGCAG+CGG - chr2.1:72369233-72369252 None:intergenic 55.0%
CATGTAGAACCGGCAGTGGT+GGG - chr2.1:72366916-72366935 None:intergenic 55.0%
GACCAAATACCCACCACTGC+CGG + chr2.1:72366904-72366923 MS.gene02301:CDS 55.0%
GATTGCTCAGGCAGTGAGCT+TGG + chr2.1:72367142-72367161 MS.gene02301:CDS 55.0%
GCATTCTCCCAGCGAAGTTG+GGG + chr2.1:72367224-72367243 MS.gene02301:CDS 55.0%
GCCGTGAAGGTTAGACATCC+TGG + chr2.1:72367758-72367777 MS.gene02301:CDS 55.0%
GGAGAGGAATTTGGCCTGGT+TGG - chr2.1:72369544-72369563 None:intergenic 55.0%
GGCAGCGAAAGCTTGATCCT+GGG + chr2.1:72370859-72370878 MS.gene02301:CDS 55.0%
GGCATGACTGCTGAACTCTC+TGG + chr2.1:72369148-72369167 MS.gene02301:CDS 55.0%
GGGTGCACAAGTGGATAGAC+AGG - chr2.1:72367998-72368017 None:intergenic 55.0%
GGTGGGTATTTGGTCCAACC+GGG - chr2.1:72366899-72366918 None:intergenic 55.0%
GTCTGCATCACATCGTACCC+AGG - chr2.1:72370879-72370898 None:intergenic 55.0%
TCTGGCTGTCGCTCTTCGTT+GGG + chr2.1:72368622-72368641 MS.gene02301:intron 55.0%
TGCATCTCCCCAACTTCGCT+GGG - chr2.1:72367234-72367253 None:intergenic 55.0%
TGGCAGCGAAAGCTTGATCC+TGG + chr2.1:72370858-72370877 MS.gene02301:CDS 55.0%
! GGTGACGACCTTGGTTCTTG+AGG + chr2.1:72370574-72370593 MS.gene02301:CDS 55.0%
!! AACCGGCAGTGGTGGGTATT+TGG - chr2.1:72366909-72366928 None:intergenic 55.0%
!!! ACTTTTTGGGGCACCCCAGA+AGG + chr2.1:72370458-72370477 MS.gene02301:CDS 55.0%
AAATCTGTTGCCCGCCGGGA+TGG + chr2.1:72369202-72369221 MS.gene02301:CDS 60.0%
AATGGGCCGATTGTCCCGGT+TGG + chr2.1:72366882-72366901 MS.gene02301:CDS 60.0%
ACCACTGGTGGTTGCCGTGA+AGG + chr2.1:72367745-72367764 MS.gene02301:CDS 60.0%
ACCTTCACGGCAACCACCAG+TGG - chr2.1:72367749-72367768 None:intergenic 60.0%
ACGGCATGTAGAACCGGCAG+TGG - chr2.1:72366920-72366939 None:intergenic 60.0%
CTCTGGCTGTCGCTCTTCGT+TGG + chr2.1:72368621-72368640 MS.gene02301:intron 60.0%
CTGCATCTCCCCAACTTCGC+TGG - chr2.1:72367235-72367254 None:intergenic 60.0%
GCATGTAGAACCGGCAGTGG+TGG - chr2.1:72366917-72366936 None:intergenic 60.0%
GTGCGCATTCTGCAGCGGTA+CGG - chr2.1:72369228-72369247 None:intergenic 60.0%
CTGCAGCGGTACGGCCATCC+CGG - chr2.1:72369219-72369238 None:intergenic 70.0%
AGCGGTACGGCCATCCCGGC+GGG - chr2.1:72369215-72369234 None:intergenic 75.0%
CAGCGGTACGGCCATCCCGG+CGG - chr2.1:72369216-72369235 None:intergenic 75.0%
GGGGTCAGTGGGCCGCTACG+CGG + chr2.1:72367501-72367520 MS.gene02301:CDS 75.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 72366807 72370974 72366807 ID=MS.gene02301
chr2.1 mRNA 72366807 72370974 72366807 ID=MS.gene02301.t1;Parent=MS.gene02301
chr2.1 exon 72366807 72368147 72366807 ID=MS.gene02301.t1.exon1;Parent=MS.gene02301.t1
chr2.1 CDS 72366807 72368147 72366807 ID=cds.MS.gene02301.t1;Parent=MS.gene02301.t1
chr2.1 exon 72369040 72369297 72369040 ID=MS.gene02301.t1.exon2;Parent=MS.gene02301.t1
chr2.1 CDS 72369040 72369297 72369040 ID=cds.MS.gene02301.t1;Parent=MS.gene02301.t1
chr2.1 exon 72370440 72370595 72370440 ID=MS.gene02301.t1.exon3;Parent=MS.gene02301.t1
chr2.1 CDS 72370440 72370595 72370440 ID=cds.MS.gene02301.t1;Parent=MS.gene02301.t1
chr2.1 exon 72370855 72370974 72370855 ID=MS.gene02301.t1.exon4;Parent=MS.gene02301.t1
chr2.1 CDS 72370855 72370974 72370855 ID=cds.MS.gene02301.t1;Parent=MS.gene02301.t1
Gene Sequence

>MS.gene02301

ATGCTTAGAGCGATAAAGAGAGCTGCCCAGTCCGTTCATAAAATAAATAGAGGCAGATACGTGGAAGTGAGTAGAAATGGGCCGATTGTCCCGGTTGGACCAAATACCCACCACTGCCGGTTCTACATGCCGTATAAGTTTCATAATGAAGCACGTAGTTCATTTTTGGGGCTTGCAACAAGGGAAAGCTTTAACAAATGTGGTTCTTTTAGAAACTTTTGTGTAAGATCAGCGAGTAATGAATTCACACACCATTCTCAGATTGCGTGGAAAAGGCTGTACAGAAAGTACTGTTCCAGTGGTGATAGTAGTAGATTTTCTCCCACCATAAATATGATTGCTCAGGCAGTGAGCTTGGCTTTGACTCGCTCTTATTTGCTGGTACCTGGTATTTTTGCATTTACATGTGGAGAGCTTGCATTCTCCCAGCGAAGTTGGGGAGATGCAGAACGTTTCCAACCACAGGAAGGATTGTATATGCGTGCCCAAGATGGGTATAATTACATGTTTACATTTACGTTCATGATAGTTGAAGGTTTTGTCTTATTAGCGAGGGCTCTATATCTAGCAATATTATTCACTCCAACCATTGTGATGGGACCGTTTGCAGATTATTTTGGACCAAATTTTAGGAAACTATGGCTCCGCGTTGTTCATCGAACACTAGAAAAAGCAGGTCCTGCTTTCATAAAATGGGGTCAGTGGGCCGCTACGCGGCCTGATCTTTTTCCTCGAGATCTATGCACTCAGCTTTCTGAACTTCATAGTAAAGCTCCTGAGCATAGTTTCAGCTACACAAAGAAAACCATTGAAAAAGCATTTAACCGAAAACTTCCCGAAATTTTTGACAATTTTGAAGAGATTCCTGTTGCATCTGGAAGCATTGCCCAAGTGCACCGTGCTACATTAAAATATCGTTATCCTGGTAAACAAGCAAAACCACTGGTGGTTGCCGTGAAGGTTAGACATCCTGGTGTGGGAGAATCAATCAGAAGGGATTTTGCTATTATCAATACGGCAGCAAAAATTTCCATGTTCATTCCCGCTCTTAAGTGGTTAAGATTAGATGAGAGTGTACAACAATTTGCAGTTTTTATGATGTCCCAAGTTGACCTTGCTAGGGAAGCTGCCCATTTGAACCGCTTCATTTATAATTTCCGCAGCTGGAAGGATGTTTCTTTCCCTAAGCCTGTCTATCCACTTGTGCACCCTGCTGTATTGGTAGAAACATATGAAAAGGGAGAAAGTGTCTCACGTTATGTTGATGGTTTTCAAGGACAAGAACATTTTAAATCTGCTCTTGCTCATATTGGGACTCATGCACTTTTGAAGATGCTTCTGGTAAAATATCTTTCATTTGCAAATTTTGATAACATTGCTATCATATAGTTTTGGATAGAGTCCTTTTGGACATTGTTGATTTGTTATGATATATAAAAACGAAGTGTTATAAAGGACAGCCTCACAATGTAATTTTTTTTGACAAAAGCTCACATTATAATTATACAGTCAGAATATTGATCTCAAGTAATTAGACAGAATATTAGAGAAATTGTTAGTCCATTTGGAAAAATGACAAGTGCGATCTGAGATTGTTTAAGTAGCATGGATTGATGAATGAATTTTTTGGAAAGAAAGATACGACACATAGATATGCATGATCAGGATCAATGTTAGATATACCAAGATAACTTGTTTATCTAATAAGCAAGTGTGAATCGGAAGTTTGACAAAACAGAGTGTATTACTTTGAGTTTCTAATTTCCGTTTTCTTTGTCAAGATATAGTGCAACAGAAATCCTTTTTAAAACAGACTCTGGCTGTCGCTCTTCGTTGGGATTAGAAAGGTCTTTGTGTGCAACTGAAACTATAGGGTGGTATAGGAAGTTATAAAAACATTGCGTGTGATCATTATTACAAAGACCTTGGTATGAGTAATTTTACTGAAAAATTAGTTTTATAAACATATAAGTAATATTTAGCTTTCCTTTTTAAGGGTATGGATCCAGCTGGACTTTTAGAGAGTGAAATTTAAGTTGCAACTGCCAATGGGATTTTTTTTTTTTATTCAAGCGGATTCTCCCAGATATCTGTTATTTGTTACAGTGCTAATATTTTTCCTCTAAATCTAAAACATTTTTTGTATCTACGGTTTATCAACCCTTTGTAAGCAGTAATTTTAAATTTGGAACATCATAAAGTTCTAGCTTAACCATGCAATGTTTTCTTTCAGGTGGACAACTTCATTCATGCAGATATGCATCCTGGGAATATTCTTGTTCGGGGCAAGTCTAGCAAACGACTTTTCAGATCAAAGCCTCATGTAATTTTCTTAGACGTAGGCATGACTGCTGAACTCTCTGGTAGTGATAGGGTAAATTTACTGGAATTTTTCAAATCTGTTGCCCGCCGGGATGGCCGTACCGCTGCAGAATGCGCACTCAGTTTATCGAAGAAACAGAATTGTCCTAATCCAAAGGCTTTCATTGAGGTAATTTTGTTTTTCCAACTTAGATTATCGATTTTTTTTCCTGTAGGCTCACTGCTCACATTCATTACAGAATGTAATTCAGTGATTGTGGATGCTACGTTTCGATACCCTTCTTCCCTTTGTTCCTCTGTTTGACGTGGTTCCTCTGTTCACATGTTATGTCGTCACCTTGTTTCCTCGCTGAACCTTTTTGTGTGTTCCTCTCAAGTCAACAACTAGCATAATTAGGGTATTCTAACTGGGCCAACCAGGCCAAATTCCTCTCCTTTTTTTCCTTTTTGTGAAAGGGATTTACTGCTTCAACCTGCAGTTAAACTTTAGTTTTTTGACCAGTACCACAATCTCTTTTTATATACTCCCTCCGTCCCTATATCTAACCACTCATTTGACTTTATTTTTGTCCCTAAATCTAAACCCCTTTTCAAATTACTAGATGCATTTATTATTTTTTTCCTAAACATACCCCTAATTAATACTACTAACTTGTTTTGAAATTTAAAAAGTCAAATTTAATACATATACAAACAAAGGACAATATGGTAATATCAACACACAAAACAGACATAGTAATTACATTGTCAGCTTTTCTTAAGAAATGTGAAAAAAGCAAAGGGAGGTTACATTAAGGGACGGAGGGAGTATATGATTTATATATCTTGCGTCAACTCTCGATTTTTCAAACATTGATTGTGATTGCTGCGTTAAAATTTGTTAGTTTGGTACCTTGGAGGCTTTGGACTGATTCCTATATTTGACGCAGATTTAAACACTGATTTATATGCCTTAAACGCAGATAAATGTGCAAATAAATCTGTCTCACATAGTTTTGTTTGGTGGGACTGATTCCTATATTTATATGTGAAGAATTACTGTAATAGGTTTGATCTTCCTAATTGTAGATTTAAATGATTTATTGTGCATGGCTGTGGTTTTAATATTCATACCATCATTTCTTATTTTATATTCATATTATTTTGCTTAAATATCTTCTTTTTGTTATTCAATCAAGTAATGTTGGATTCCCTTCAGCAAATAATGTCAAATATCATTTTATTTTACGAAGAATTTGCATCTGCTTGACGAACTCCTTGACTATGATCTTGCACGATTTCATTCATTATTTCCTCTTTGTTTTCTAACAGGAAGTGGAAGAGGCATTTACTTTTTGGGGCACCCCAGAAGGTGACATAGTTCATCCTGCAGAGTGCATGGAGCAATTACTTGAGAAAGTCAGGCGTCATAGAGTTAATATTGATGGTAATGTTTGTACTGTCATGGTGACGACCTTGGTTCTTGAGGTAATTATTTTTCTTCTTGTTGCCATGTTCCTTAATATCATGTGACCACACCTACCAGTTACAAGTATTGGCTGACTGAAAACTAGGGAAACACTATCAAACTTGATCAATGAAATCATATTAGAATTAGAAAATTTTTAACTTCTCTACAACAATGATTTGTGCCAACATAGAAGAATTGGAACTTTTCTTGCTGCATGCTCCCGATGATTAACTTTCCATTGTACTTACCTAATATTTGTAACTTTATAATTTGTAGGGTTGGCAGCGAAAGCTTGATCCTGGGTACGATGTGATGCAGACGCTGCAGACTTTGCTGCTTAGAGCTGATTGGGCAAAGGACCTTTCTTACACGATTGATGGACTCATGGCTCCTTGA
Protein sequence

>MS.gene02301.t1

MLRAIKRAAQSVHKINRGRYVEVSRNGPIVPVGPNTHHCRFYMPYKFHNEARSSFLGLATRESFNKCGSFRNFCVRSASNEFTHHSQIAWKRLYRKYCSSGDSSRFSPTINMIAQAVSLALTRSYLLVPGIFAFTCGELAFSQRSWGDAERFQPQEGLYMRAQDGYNYMFTFTFMIVEGFVLLARALYLAILFTPTIVMGPFADYFGPNFRKLWLRVVHRTLEKAGPAFIKWGQWAATRPDLFPRDLCTQLSELHSKAPEHSFSYTKKTIEKAFNRKLPEIFDNFEEIPVASGSIAQVHRATLKYRYPGKQAKPLVVAVKVRHPGVGESIRRDFAIINTAAKISMFIPALKWLRLDESVQQFAVFMMSQVDLAREAAHLNRFIYNFRSWKDVSFPKPVYPLVHPAVLVETYEKGESVSRYVDGFQGQEHFKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRGKSSKRLFRSKPHVIFLDVGMTAELSGSDRVNLLEFFKSVARRDGRTAAECALSLSKKQNCPNPKAFIEEVEEAFTFWGTPEGDIVHPAECMEQLLEKVRRHRVNIDGNVCTVMVTTLVLEGWQRKLDPGYDVMQTLQTLLLRADWAKDLSYTIDGLMAP