AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene023600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene023600.t1 MTR_8g087000 96.735 245 7 1 1 244 1 245 9.80e-178 488
MS.gene023600.t1 MTR_8g087000 96.327 245 7 2 1 244 1 244 2.41e-175 482
MS.gene023600.t1 MTR_8g087000 95.302 149 7 0 96 244 35 183 1.68e-104 300
MS.gene023600.t1 MTR_2g016770 52.500 200 72 6 39 227 4 191 6.40e-62 193
MS.gene023600.t1 MTR_2g016770 52.332 193 69 6 46 227 3 183 1.15e-60 190
MS.gene023600.t1 MTR_2g083870 52.404 208 69 7 42 226 47 247 2.52e-59 188
MS.gene023600.t1 MTR_2g032030 56.452 124 43 2 26 140 210 331 5.51e-38 137
MS.gene023600.t1 MTR_2g032030 56.452 124 43 2 26 140 210 331 8.54e-38 138
MS.gene023600.t1 MTR_7g109600 59.184 98 37 2 45 142 25 119 8.01e-35 125
MS.gene023600.t1 MTR_7g079040 54.128 109 34 2 33 141 127 219 1.88e-31 118
MS.gene023600.t1 MTR_4g127040 49.533 107 47 1 31 137 207 306 3.19e-29 112
MS.gene023600.t1 MTR_5g016610 50.485 103 42 2 33 135 165 258 3.63e-28 108
MS.gene023600.t1 MTR_8g028565 44.828 116 57 1 38 153 124 232 5.23e-28 109
MS.gene023600.t1 MTR_1g099600 44.531 128 57 3 49 163 145 271 5.32e-28 108
MS.gene023600.t1 MTR_4g094908 55.914 93 34 3 43 135 240 325 6.84e-28 108
MS.gene023600.t1 MTR_8g098945 58.904 73 30 0 77 149 130 202 2.13e-27 106
MS.gene023600.t1 MTR_1g009613 52.809 89 35 1 45 133 238 319 9.01e-27 106
MS.gene023600.t1 MTR_1g070455 68.333 60 19 0 75 134 292 351 2.23e-25 102
MS.gene023600.t1 MTR_2g024350 58.462 65 27 0 75 139 7 71 1.65e-23 95.1
MS.gene023600.t1 MTR_2g024380 59.677 62 25 0 75 136 250 311 5.89e-22 94.4
MS.gene023600.t1 MTR_3g108960 43.269 104 49 3 33 133 275 371 8.71e-22 93.2
MS.gene023600.t1 MTR_0117s0040 57.627 59 25 0 75 133 73 131 1.50e-21 90.1
MS.gene023600.t1 MTR_7g110720 51.765 85 39 2 57 140 197 280 4.25e-20 88.6
MS.gene023600.t1 MTR_7g110720 58.462 65 27 0 76 140 189 253 5.16e-20 88.2
MS.gene023600.t1 MTR_3g053330 53.521 71 32 1 66 136 242 311 2.10e-19 87.0
MS.gene023600.t1 MTR_2g023930 59.016 61 25 0 76 136 305 365 2.60e-19 87.0
MS.gene023600.t1 MTR_8g069935 39.048 105 63 1 74 177 329 433 4.60e-19 85.9
MS.gene023600.t1 MTR_2g088000 54.930 71 31 1 66 136 340 409 5.86e-19 85.9
MS.gene023600.t1 MTR_5g042920 53.030 66 30 1 77 142 321 385 6.83e-19 85.5
MS.gene023600.t1 MTR_5g042920 49.206 63 30 2 74 136 149 209 2.29e-13 69.3
MS.gene023600.t1 MTR_7g100510 53.521 71 32 1 77 147 362 431 9.77e-19 84.7
MS.gene023600.t1 MTR_7g100510 50.794 63 29 2 74 136 187 247 2.39e-14 72.0
MS.gene023600.t1 MTR_4g094588 58.065 62 25 1 77 138 179 239 1.09e-18 84.0
MS.gene023600.t1 MTR_7g109800 43.529 85 47 1 77 161 146 229 1.32e-18 83.2
MS.gene023600.t1 MTR_4g094412 58.065 62 26 0 76 137 243 304 1.34e-18 84.7
MS.gene023600.t1 MTR_4g094412 58.065 62 26 0 76 137 234 295 1.36e-18 84.7
MS.gene023600.t1 MTR_4g082580 51.515 66 31 1 77 142 279 343 3.66e-18 82.8
MS.gene023600.t1 MTR_4g049760 53.968 63 29 0 76 138 290 352 5.10e-18 83.2
MS.gene023600.t1 MTR_5g094430 48.485 66 33 1 77 142 253 317 6.99e-18 82.4
MS.gene023600.t1 MTR_5g091390 54.839 62 27 1 77 138 158 218 7.37e-18 81.3
MS.gene023600.t1 MTR_5g094430 48.485 66 33 1 77 142 231 295 7.46e-18 82.0
MS.gene023600.t1 MTR_7g062220 45.714 105 52 4 35 136 82 184 8.02e-18 81.3
MS.gene023600.t1 MTR_4g107970 54.839 62 28 0 76 137 255 316 9.57e-18 82.4
MS.gene023600.t1 MTR_4g107970 54.839 62 28 0 76 137 178 239 9.69e-18 82.4
MS.gene023600.t1 MTR_5g094430 48.485 66 33 1 77 142 365 429 1.08e-17 82.0
MS.gene023600.t1 MTR_2g045360 56.667 60 26 0 77 136 212 271 1.19e-17 81.6
MS.gene023600.t1 MTR_7g011820 50.000 66 32 1 77 142 411 475 1.32e-17 82.0
MS.gene023600.t1 MTR_7g011820 34.906 106 52 3 46 136 183 286 1.31e-12 67.0
MS.gene023600.t1 MTR_4g132430 55.738 61 27 0 76 136 261 321 1.47e-17 81.6
MS.gene023600.t1 MTR_4g132430 55.738 61 27 0 76 136 127 187 1.50e-17 80.9
MS.gene023600.t1 MTR_4g049790 50.794 63 31 0 76 138 312 374 1.66e-17 81.6
MS.gene023600.t1 MTR_7g009730 49.315 73 36 1 67 138 209 281 3.50e-17 80.9
MS.gene023600.t1 MTR_3g056100 50.794 63 30 1 77 139 416 477 4.38e-17 80.5
MS.gene023600.t1 MTR_1g086790 42.308 78 44 1 77 154 159 235 4.50e-17 79.3
MS.gene023600.t1 MTR_3g056100 50.794 63 30 1 77 139 403 464 4.55e-17 80.5
MS.gene023600.t1 MTR_3g056100 50.794 63 30 1 77 139 272 333 4.61e-17 80.1
MS.gene023600.t1 MTR_3g056100 50.794 63 30 1 77 139 259 320 4.84e-17 80.1
MS.gene023600.t1 MTR_1g013760 51.724 58 28 0 77 134 141 198 5.93e-17 78.6
MS.gene023600.t1 MTR_8g067635 52.381 63 30 0 77 139 350 412 6.27e-17 79.7
MS.gene023600.t1 MTR_5g043880 30.726 179 104 5 45 214 98 265 9.07e-17 77.8
MS.gene023600.t1 MTR_3g106060 51.724 58 28 0 77 134 139 196 1.04e-16 77.8
MS.gene023600.t1 MTR_3g009470 37.500 88 54 1 77 164 496 582 2.52e-16 78.2
MS.gene023600.t1 MTR_3g009470 36.522 115 58 4 65 172 269 375 1.98e-14 72.8
MS.gene023600.t1 MTR_3g031220 44.304 79 41 2 77 155 366 441 4.70e-16 77.4
MS.gene023600.t1 MTR_3g031220 38.710 93 53 3 77 167 199 289 6.61e-13 68.2
MS.gene023600.t1 MTR_4g007060 50.000 60 30 0 77 136 129 188 6.83e-16 75.5
MS.gene023600.t1 MTR_4g007060 50.000 60 30 0 77 136 163 222 7.92e-16 75.9
MS.gene023600.t1 MTR_2g105060 38.462 91 55 1 77 167 95 184 8.06e-16 74.7
MS.gene023600.t1 MTR_8g067650 50.794 63 31 0 77 139 340 402 9.05e-16 76.6
MS.gene023600.t1 MTR_2g105060 38.462 91 55 1 77 167 170 259 1.26e-15 75.1
MS.gene023600.t1 MTR_7g071120 40.698 86 44 2 77 156 325 409 1.32e-15 75.9
MS.gene023600.t1 MTR_7g071120 44.776 67 35 2 77 143 167 231 6.99e-11 62.0
MS.gene023600.t1 MTR_4g122530 42.857 70 39 1 77 146 209 277 1.53e-15 75.5
MS.gene023600.t1 MTR_6g053200 38.462 91 45 1 60 139 303 393 1.60e-15 75.9
MS.gene023600.t1 MTR_4g130900 53.968 63 28 1 77 139 360 421 2.16e-15 75.5
MS.gene023600.t1 MTR_7g080020 44.928 69 37 1 77 145 494 561 2.42e-15 75.5
MS.gene023600.t1 MTR_7g080020 51.613 62 28 2 77 138 281 340 7.58e-13 68.2
MS.gene023600.t1 MTR_8g092010 44.286 70 38 1 77 146 109 177 3.17e-15 72.0
MS.gene023600.t1 MTR_5g097490 51.562 64 30 1 76 139 252 314 3.32e-15 74.3
MS.gene023600.t1 MTR_4g013260 49.206 63 31 1 77 139 337 398 5.69e-15 73.9
MS.gene023600.t1 MTR_4g013260 46.667 60 31 1 77 136 185 243 3.50e-11 62.8
MS.gene023600.t1 MTR_8g099350 37.931 116 63 4 18 131 81 189 5.70e-15 73.6
MS.gene023600.t1 MTR_3g095040 45.714 70 37 1 77 146 119 187 7.66e-15 71.2
MS.gene023600.t1 MTR_7g109600 61.702 47 18 0 96 142 7 53 8.03e-15 71.2
MS.gene023600.t1 MTR_5g067680 47.692 65 32 1 69 131 195 259 1.14e-14 72.8
MS.gene023600.t1 MTR_2g033820 46.774 62 32 1 77 138 204 264 1.15e-14 72.8
MS.gene023600.t1 MTR_1g015140 52.632 57 26 1 77 133 103 158 1.34e-14 69.7
MS.gene023600.t1 MTR_3g090860 53.333 60 26 1 74 131 131 190 1.52e-14 72.4
MS.gene023600.t1 MTR_5g074400 45.714 70 37 1 77 146 421 489 1.59e-14 72.8
MS.gene023600.t1 MTR_5g074400 48.333 60 29 2 77 136 244 301 1.84e-11 63.9
MS.gene023600.t1 MTR_1g013790 46.667 60 32 0 77 136 102 161 1.79e-14 71.2
MS.gene023600.t1 MTR_7g080000 47.619 63 32 1 77 139 433 494 1.82e-14 72.8
MS.gene023600.t1 MTR_7g080000 54.839 62 26 2 77 138 235 294 3.13e-14 72.0
MS.gene023600.t1 MTR_7g028415 44.118 68 35 2 77 144 94 158 2.12e-14 69.3
MS.gene023600.t1 MTR_7g028710 44.118 68 35 2 77 144 94 158 2.12e-14 69.3
MS.gene023600.t1 MTR_3g009470 48.611 72 35 2 65 136 269 338 2.16e-14 72.4
MS.gene023600.t1 MTR_6g086555 49.206 63 30 2 76 137 206 267 3.16e-14 71.6
MS.gene023600.t1 MTR_3g104750 52.632 57 26 1 77 133 105 160 4.22e-14 68.2
MS.gene023600.t1 MTR_1g077780 50.000 62 30 1 77 138 63 123 5.12e-14 67.8
MS.gene023600.t1 MTR_7g117200 38.000 100 53 3 69 159 111 210 1.03e-13 69.7
MS.gene023600.t1 MTR_7g079010 49.123 57 28 1 77 133 142 197 1.46e-13 68.2
MS.gene023600.t1 MTR_4g047580 46.032 63 34 0 76 138 281 343 1.68e-13 69.7
MS.gene023600.t1 MTR_8g007270 34.188 117 68 3 18 134 104 211 2.47e-13 67.4
MS.gene023600.t1 MTR_8g092140 48.276 58 29 1 77 134 161 217 4.64e-13 67.0
MS.gene023600.t1 MTR_3g031220 38.710 93 53 3 77 167 199 289 6.24e-13 67.8
MS.gene023600.t1 MTR_3g095080 48.276 58 29 1 77 134 145 201 8.36e-13 65.9
MS.gene023600.t1 MTR_8g027860 40.659 91 45 4 77 159 137 226 8.40e-13 67.4
MS.gene023600.t1 MTR_7g073430 33.813 139 73 3 34 160 87 218 8.55e-13 66.6
MS.gene023600.t1 MTR_3g095080 48.276 58 29 1 77 134 169 225 9.52e-13 66.2
MS.gene023600.t1 MTR_1g078260 41.772 79 44 2 77 154 248 325 8.71e-12 64.7
MS.gene023600.t1 MTR_2g075610 34.426 122 64 3 56 170 4 116 2.97e-11 61.2
MS.gene023600.t1 MTR_7g073380 34.951 103 55 2 70 160 117 219 4.32e-11 62.0
MS.gene023600.t1 MTR_2g075750 35.417 96 51 2 77 170 29 115 6.82e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene023600.t1 AT1G29280 51.984 252 84 7 1 226 7 247 1.79e-74 227
MS.gene023600.t1 AT3G58710 42.308 260 110 6 1 229 1 251 6.04e-55 177
MS.gene023600.t1 AT3G58710 41.538 260 111 6 1 229 1 250 1.45e-53 174
MS.gene023600.t1 AT2G34830 65.625 96 31 1 45 140 186 279 1.59e-37 136
MS.gene023600.t1 AT2G34830 65.625 96 31 1 45 140 195 288 1.83e-37 136
MS.gene023600.t1 AT1G30650 64.583 96 32 1 45 140 188 281 7.58e-37 134
MS.gene023600.t1 AT4G01250 50.420 119 44 3 33 148 94 200 1.01e-30 115
MS.gene023600.t1 AT4G24240 52.577 97 39 1 45 141 257 346 3.25e-28 110
MS.gene023600.t1 AT2G23320 50.549 91 38 1 45 135 216 299 3.66e-28 109
MS.gene023600.t1 AT5G45050 57.576 99 29 3 45 141 1158 1245 1.97e-27 110
MS.gene023600.t1 AT5G45050 57.576 99 29 3 45 141 1130 1217 2.08e-27 110
MS.gene023600.t1 AT5G45050 52.586 116 40 4 30 141 1002 1106 2.41e-27 110
MS.gene023600.t1 AT5G52830 59.302 86 30 2 76 157 165 249 2.76e-27 107
MS.gene023600.t1 AT4G23550 59.259 81 31 1 76 154 140 220 3.05e-27 106
MS.gene023600.t1 AT4G31550 47.222 108 50 1 26 133 203 303 6.13e-27 106
MS.gene023600.t1 AT2G30590 71.186 59 17 0 75 133 312 370 5.71e-26 104
MS.gene023600.t1 AT2G24570 52.222 90 36 1 44 133 218 300 1.53e-25 102
MS.gene023600.t1 AT4G31550 50.562 89 37 1 45 133 221 302 4.58e-25 101
MS.gene023600.t1 AT5G28650 43.802 121 59 2 18 138 213 324 1.80e-24 99.8
MS.gene023600.t1 AT3G04670 42.400 125 63 2 16 138 207 324 4.96e-24 98.6
MS.gene023600.t1 AT5G46350 55.072 69 30 1 77 145 184 251 5.74e-20 87.4
MS.gene023600.t1 AT2G04880 52.000 75 35 1 76 150 283 356 6.81e-20 88.2
MS.gene023600.t1 AT4G04450 60.656 61 24 0 76 136 198 258 7.14e-20 88.2
MS.gene023600.t1 AT2G04880 50.000 82 40 1 76 157 307 387 7.19e-20 88.6
MS.gene023600.t1 AT4G04450 60.656 61 24 0 76 136 292 352 8.30e-20 88.2
MS.gene023600.t1 AT1G62300 59.016 61 25 0 76 136 312 372 1.67e-19 87.4
MS.gene023600.t1 AT1G68150 56.923 65 28 0 76 140 235 299 2.05e-19 86.3
MS.gene023600.t1 AT4G22070 59.016 61 25 0 76 136 297 357 2.55e-19 87.0
MS.gene023600.t1 AT4G22070 59.016 61 25 0 76 136 297 357 2.55e-19 87.0
MS.gene023600.t1 AT4G22070 59.016 61 25 0 76 136 297 357 2.55e-19 87.0
MS.gene023600.t1 AT4G22070 59.016 61 25 0 76 136 297 357 2.55e-19 87.0
MS.gene023600.t1 AT5G15130 56.061 66 29 0 76 141 227 292 2.60e-19 87.0
MS.gene023600.t1 AT5G15130 56.061 66 29 0 76 141 185 250 3.10e-19 86.7
MS.gene023600.t1 AT4G01720 48.148 81 42 0 56 136 219 299 1.38e-18 84.7
MS.gene023600.t1 AT4G18170 56.452 62 26 1 77 138 173 233 3.10e-18 82.4
MS.gene023600.t1 AT5G26170 55.172 58 25 1 77 134 114 170 6.01e-18 79.0
MS.gene023600.t1 AT1G29860 56.667 60 25 1 77 136 137 195 6.05e-18 81.3
MS.gene023600.t1 AT5G45260 51.250 80 34 2 65 139 1194 1273 6.55e-18 83.2
MS.gene023600.t1 AT5G49520 51.613 62 29 1 77 138 222 282 8.29e-18 82.0
MS.gene023600.t1 AT4G31800 51.667 60 29 0 77 136 112 171 1.42e-17 79.7
MS.gene023600.t1 AT4G26640 46.479 71 37 1 77 147 206 275 1.91e-17 80.9
MS.gene023600.t1 AT4G26640 46.479 71 37 1 77 147 206 275 1.91e-17 80.9
MS.gene023600.t1 AT4G26640 46.479 71 37 1 77 147 206 275 1.91e-17 80.9
MS.gene023600.t1 AT4G26640 46.479 71 37 1 77 147 206 275 1.91e-17 80.9
MS.gene023600.t1 AT4G31800 51.667 60 29 0 77 136 177 236 1.97e-17 80.1
MS.gene023600.t1 AT1G13960 53.333 60 27 1 77 136 257 315 2.51e-17 80.5
MS.gene023600.t1 AT1G13960 50.794 63 29 2 74 136 74 134 2.48e-14 72.0
MS.gene023600.t1 AT4G26640 46.479 71 37 1 77 147 310 379 2.85e-17 80.9
MS.gene023600.t1 AT4G26640 46.479 71 37 1 77 147 382 451 3.02e-17 80.9
MS.gene023600.t1 AT2G03340 48.485 66 33 1 77 142 416 480 3.06e-17 80.9
MS.gene023600.t1 AT2G03340 41.463 82 46 2 71 152 245 324 5.31e-14 71.2
MS.gene023600.t1 AT2G25000 42.857 91 48 2 68 155 95 184 3.10e-17 78.2
MS.gene023600.t1 AT2G25000 42.857 91 48 2 68 155 95 184 3.10e-17 78.2
MS.gene023600.t1 AT1G13960 53.333 60 27 1 77 136 410 468 3.33e-17 80.9
MS.gene023600.t1 AT1G13960 50.794 63 29 2 74 136 227 287 3.58e-14 72.0
MS.gene023600.t1 AT4G26640 46.479 71 37 1 77 147 342 411 3.34e-17 80.9
MS.gene023600.t1 AT1G18860 55.738 61 27 0 76 136 239 299 4.72e-17 80.5
MS.gene023600.t1 AT2G25000 42.857 91 48 2 68 155 117 206 5.63e-17 78.2
MS.gene023600.t1 AT4G30935 53.968 63 28 1 77 139 332 393 6.28e-17 79.7
MS.gene023600.t1 AT2G38470 42.222 90 47 3 77 163 363 450 8.57e-17 79.7
MS.gene023600.t1 AT2G38470 48.333 60 29 2 77 136 185 242 2.08e-11 63.5
MS.gene023600.t1 AT2G25000 42.857 91 48 2 68 155 138 227 9.05e-17 77.8
MS.gene023600.t1 AT2G40740 46.835 79 37 2 69 142 166 244 4.52e-16 76.3
MS.gene023600.t1 AT2G40740 46.835 79 37 2 69 142 175 253 5.65e-16 75.9
MS.gene023600.t1 AT2G47260 48.387 62 31 1 77 138 175 235 1.19e-15 75.5
MS.gene023600.t1 AT3G62340 52.459 61 28 1 77 137 119 178 1.65e-15 74.3
MS.gene023600.t1 AT1G69310 34.711 121 65 3 21 133 89 203 1.74e-15 74.3
MS.gene023600.t1 AT1G69310 34.711 121 65 3 21 133 89 203 1.74e-15 74.3
MS.gene023600.t1 AT1G69310 34.711 121 65 3 21 133 89 203 1.74e-15 74.3
MS.gene023600.t1 AT2G46400 33.566 143 83 3 18 157 55 188 2.39e-15 74.3
MS.gene023600.t1 AT5G13080 44.118 68 35 2 77 144 68 132 7.35e-15 70.1
MS.gene023600.t1 AT5G07100 47.143 70 36 1 77 146 142 210 1.01e-14 71.2
MS.gene023600.t1 AT5G07100 45.588 68 36 1 71 138 19 85 5.02e-12 63.9
MS.gene023600.t1 AT5G07100 47.143 70 36 1 77 146 142 210 1.01e-14 71.2
MS.gene023600.t1 AT5G07100 45.588 68 36 1 71 138 19 85 5.02e-12 63.9
MS.gene023600.t1 AT5G07100 47.143 70 36 1 77 146 142 210 1.01e-14 71.2
MS.gene023600.t1 AT5G07100 45.588 68 36 1 71 138 19 85 5.02e-12 63.9
MS.gene023600.t1 AT5G07100 47.143 70 36 1 77 146 142 210 1.01e-14 71.2
MS.gene023600.t1 AT5G07100 45.588 68 36 1 71 138 19 85 5.02e-12 63.9
MS.gene023600.t1 AT2G37260 56.140 57 24 1 77 133 350 405 1.08e-14 73.2
MS.gene023600.t1 AT2G37260 51.667 60 27 2 77 136 166 223 2.43e-12 66.2
MS.gene023600.t1 AT2G37260 56.140 57 24 1 77 133 268 323 1.15e-14 72.8
MS.gene023600.t1 AT2G37260 51.667 60 27 2 77 136 84 141 3.11e-12 65.9
MS.gene023600.t1 AT2G37260 56.140 57 24 1 77 133 270 325 1.17e-14 72.8
MS.gene023600.t1 AT2G37260 51.667 60 27 2 77 136 86 143 3.13e-12 65.9
MS.gene023600.t1 AT5G56270 49.206 63 31 1 77 139 488 549 1.17e-14 73.6
MS.gene023600.t1 AT5G56270 50.794 63 29 2 74 136 271 331 1.37e-12 67.4
MS.gene023600.t1 AT1G80840 45.000 60 33 0 77 136 147 206 1.83e-14 71.6
MS.gene023600.t1 AT5G07100 47.143 70 36 1 77 146 235 303 2.09e-14 71.6
MS.gene023600.t1 AT5G07100 45.588 68 36 1 71 138 112 178 1.39e-11 63.5
MS.gene023600.t1 AT3G01080 50.000 60 29 1 77 136 307 365 2.19e-14 72.4
MS.gene023600.t1 AT3G01080 48.485 66 32 2 74 139 165 228 9.14e-14 70.5
MS.gene023600.t1 AT3G01080 50.000 60 29 1 77 136 345 403 2.24e-14 72.4
MS.gene023600.t1 AT3G01080 48.485 66 32 2 74 139 203 266 8.88e-14 70.5
MS.gene023600.t1 AT1G69810 49.206 63 31 1 76 137 203 265 3.30e-14 71.6
MS.gene023600.t1 AT2G21900 48.333 60 30 1 77 136 110 168 4.36e-14 69.3
MS.gene023600.t1 AT1G69810 49.206 63 31 1 76 137 145 207 4.77e-14 70.9
MS.gene023600.t1 AT2G30250 48.387 62 31 1 77 138 329 389 7.28e-14 70.5
MS.gene023600.t1 AT3G01080 48.485 66 32 2 74 139 203 266 9.79e-14 70.1
MS.gene023600.t1 AT4G26440 50.794 63 29 2 74 136 176 236 1.26e-13 70.1
MS.gene023600.t1 AT4G26440 41.176 68 39 1 77 144 373 439 3.30e-13 68.9
MS.gene023600.t1 AT4G11070 41.000 100 51 3 34 131 73 166 1.36e-13 68.9
MS.gene023600.t1 AT4G11070 41.000 100 51 3 34 131 105 198 1.40e-13 69.3
MS.gene023600.t1 AT3G01970 46.552 58 30 1 77 134 66 122 1.44e-13 66.6
MS.gene023600.t1 AT1G64000 44.928 69 35 2 77 145 115 180 1.68e-13 67.4
MS.gene023600.t1 AT5G43290 50.000 68 33 1 66 133 104 170 1.98e-13 68.6
MS.gene023600.t1 AT4G23810 41.176 85 48 1 74 156 156 240 3.79e-13 68.2
MS.gene023600.t1 AT1G55600 43.548 62 34 1 75 136 306 366 4.87e-13 68.6
MS.gene023600.t1 AT3G56400 44.286 70 33 2 77 140 121 190 4.96e-13 67.8
MS.gene023600.t1 AT1G66550 27.835 194 121 7 36 217 67 253 6.43e-13 67.0
MS.gene023600.t1 AT2G44745 50.877 57 27 1 77 133 146 201 6.77e-13 66.2
MS.gene023600.t1 AT1G66560 33.544 158 94 5 68 217 94 248 7.78e-13 66.6
MS.gene023600.t1 AT5G41570 47.368 57 29 1 77 133 99 154 1.07e-12 65.1
MS.gene023600.t1 AT1G66550 28.042 189 122 6 36 217 67 248 1.42e-12 65.9
MS.gene023600.t1 AT2G46130 47.368 57 29 1 77 133 31 86 1.50e-12 62.8
MS.gene023600.t1 AT4G39410 50.000 58 28 1 77 134 224 280 2.32e-12 65.9
MS.gene023600.t1 AT5G24110 41.558 77 42 2 77 151 114 189 2.91e-12 65.5
MS.gene023600.t1 AT5G64810 47.368 57 29 1 77 133 111 166 6.67e-12 63.2
MS.gene023600.t1 AT4G12020 45.902 61 31 2 76 136 468 526 1.40e-11 64.7
MS.gene023600.t1 AT4G12020 45.902 61 31 2 76 136 468 526 1.40e-11 64.7
MS.gene023600.t1 AT4G12020 45.902 61 31 2 76 136 468 526 1.41e-11 64.7
MS.gene023600.t1 AT4G12020 45.902 61 31 2 76 136 468 526 1.49e-11 64.3
MS.gene023600.t1 AT4G12020 45.902 61 31 2 76 136 468 526 1.66e-11 64.3
MS.gene023600.t1 AT4G12020 45.902 61 31 2 76 136 468 526 1.66e-11 64.3
MS.gene023600.t1 AT4G12020 45.902 61 31 2 76 136 468 526 1.73e-11 64.3
MS.gene023600.t1 AT4G12020 45.902 61 31 2 76 136 468 526 1.75e-11 64.3
MS.gene023600.t1 AT4G12020 45.902 61 31 2 76 136 468 526 1.79e-11 64.3
MS.gene023600.t1 AT4G12020 45.902 61 31 2 76 136 401 459 1.81e-11 64.3
MS.gene023600.t1 AT4G12020 45.902 61 31 2 76 136 468 526 2.09e-11 63.9
MS.gene023600.t1 AT2G40750 36.842 95 44 3 77 169 153 233 2.14e-11 63.2
MS.gene023600.t1 AT5G01900 39.326 89 50 3 46 131 80 167 4.64e-11 61.6

Find 86 sgRNAs with CRISPR-Local

Find 113 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCTACTTGTTTCCTTGC+TGG 0.265929 4.4:+13358841 None:intergenic
CCTCATGGATCAAGGCTAAA+AGG 0.300291 4.4:-13359189 MS.gene023600:CDS
ATCCATGAGGTTCCTTGATT+GGG 0.305299 4.4:+13359202 None:intergenic
TGCTGACCTTGGAGAGTTGC+CGG 0.311039 4.4:-13358530 MS.gene023600:CDS
GATCCATGAGGTTCCTTGAT+TGG 0.323279 4.4:+13359201 None:intergenic
GGGTTCGACCGGGGCTGGTT+CGG 0.336758 4.4:+13358717 None:intergenic
TACATATATACCTGGGATAA+GGG 0.344190 4.4:+13359097 None:intergenic
GGGATAAGGGGAACCTTTGA+TGG 0.344969 4.4:+13359110 None:intergenic
TCATGGGCATGGAGAAAATA+TGG 0.349799 4.4:-13359141 MS.gene023600:CDS
TTGGTCTTGGACGACGAGTT+GGG 0.371032 4.4:-13358673 MS.gene023600:CDS
ATTTGCAGGCCACTTGGTCT+TGG 0.387001 4.4:-13358686 MS.gene023600:CDS
GACGACGAGTTGGGGTGGTT+GGG 0.391485 4.4:-13358664 MS.gene023600:CDS
GGACGACGAGTTGGGGTGGT+TGG 0.399879 4.4:-13358665 MS.gene023600:CDS
CGGAGTGTTCTACGGTGTTC+CGG 0.400890 4.4:-13358510 MS.gene023600:CDS
TCATCGGGTTCGACCGGGGC+TGG 0.415664 4.4:+13358712 None:intergenic
TCTTCCTCTTGGTGAGTATG+TGG 0.417393 4.4:+13359506 None:intergenic
CTTCTTCTTCATCTAAGAAA+AGG 0.422707 4.4:-13359412 MS.gene023600:intron
ATACATATATACCTGGGATA+AGG 0.423241 4.4:+13359096 None:intergenic
GGATGCACGACGGCGGTTAA+CGG 0.424783 4.4:-13358476 MS.gene023600:CDS
GGTGTTCCGGCATGGGTTGT+TGG 0.425026 4.4:-13358497 MS.gene023600:CDS
GTTCTACGGTGTTCCGGCAT+GGG 0.431598 4.4:-13358504 MS.gene023600:CDS
AATTTCTCATCGGGTTCGAC+CGG 0.432573 4.4:+13358706 None:intergenic
TGTTCTACGGTGTTCCGGCA+TGG 0.440211 4.4:-13358505 MS.gene023600:CDS
CTTAGATGAAGAAGAAGAGT+GGG 0.440432 4.4:+13359418 None:intergenic
TGGCCTGCAAATTTCTCATC+GGG 0.444805 4.4:+13358697 None:intergenic
TATTCTGCAGAGTCAGATAA+TGG 0.464513 4.4:-13358617 MS.gene023600:CDS
ATACACCACCTTCAGATTCA+TGG 0.466621 4.4:-13359158 MS.gene023600:CDS
TAGGTTATGATGAGCATTGT+GGG 0.473501 4.4:+13358805 None:intergenic
GCAGGCGAGCCATACAGAAA+AGG 0.475140 4.4:-13359236 MS.gene023600:CDS
CGGTTAACGGCTCCATGGTG+TGG 0.482047 4.4:-13358463 MS.gene023600:CDS
CTTCCTCTTGGTGAGTATGT+GGG 0.486025 4.4:+13359507 None:intergenic
TCCACCTCATTTAACATCGA+TGG 0.489302 4.4:-13359452 MS.gene023600:CDS
ATTTCTCATCGGGTTCGACC+GGG 0.491991 4.4:+13358707 None:intergenic
GAACCCGATGAGAAATTTGC+AGG 0.498994 4.4:-13358700 MS.gene023600:CDS
CGACCACAACCATGCATGGC+CGG 0.500097 4.4:-13358776 MS.gene023600:CDS
CAGGCGAGCCATACAGAAAA+GGG 0.520309 4.4:-13359235 MS.gene023600:CDS
ATATGTCAGTGTCTTCCTCT+TGG 0.521357 4.4:+13359495 None:intergenic
ATGGTTGTGGTCGGAGGAGT+AGG 0.522047 4.4:+13358786 None:intergenic
AAACCGGCCATGCATGGTTG+TGG 0.522229 4.4:+13358773 None:intergenic
CTTGGTCTTGGACGACGAGT+TGG 0.523055 4.4:-13358674 MS.gene023600:CDS
TCAAGGAACCTCATGGATCA+AGG 0.523927 4.4:-13359197 MS.gene023600:CDS
GGATAAGGGGAACCTTTGAT+GGG 0.524871 4.4:+13359111 None:intergenic
CAAGAAAACCGAACCAGCCC+CGG 0.525073 4.4:-13358725 MS.gene023600:CDS
TACACCACCTTCAGATTCAT+GGG 0.529082 4.4:-13359157 MS.gene023600:CDS
AACTCATCCTCTTCCTTCAT+CGG 0.530929 4.4:+13358559 None:intergenic
TGAGAAATTTGCAGGCCACT+TGG 0.533764 4.4:-13358692 MS.gene023600:CDS
AGAGTTGCCGGAGTGTTCTA+CGG 0.541445 4.4:-13358518 MS.gene023600:CDS
ATGTTAAATGAGGTGGAAGA+AGG 0.543531 4.4:+13359458 None:intergenic
ACATGTACAGAGCGTACTAC+AGG 0.553074 4.4:-13358885 MS.gene023600:intron
CTCCATGCCCATGAATCTGA+AGG 0.553726 4.4:+13359150 None:intergenic
CCATGCATGGTTGTGGTCGG+AGG 0.558720 4.4:+13358780 None:intergenic
GGTGGTGCAAATCCCAATCA+AGG 0.559751 4.4:-13359214 MS.gene023600:CDS
GTGGCCTGCAAATTTCTCAT+CGG 0.563399 4.4:+13358696 None:intergenic
AACACTCCGGCAACTCTCCA+AGG 0.568073 4.4:+13358524 None:intergenic
CACCTTCAGATTCATGGGCA+TGG 0.568381 4.4:-13359152 MS.gene023600:CDS
ATCCCAATCAAGGAACCTCA+TGG 0.568792 4.4:-13359204 MS.gene023600:CDS
GGTTAACGGCTCCATGGTGT+GGG 0.571388 4.4:-13358462 MS.gene023600:CDS
TCTTAGATGAAGAAGAAGAG+TGG 0.575037 4.4:+13359417 None:intergenic
GCCATCGATGTTAAATGAGG+TGG 0.577013 4.4:+13359451 None:intergenic
AAATGAGGTGGAAGAAGGAG+TGG 0.577175 4.4:+13359463 None:intergenic
TGGTCTTGGACGACGAGTTG+GGG 0.578175 4.4:-13358672 MS.gene023600:CDS
GACGGCGGTTAACGGCTCCA+TGG 0.581883 4.4:-13358468 MS.gene023600:CDS
GGCACCAATTTGTCAAGATG+TGG 0.584006 4.4:+13358438 None:intergenic
ACATATATACCTGGGATAAG+GGG 0.585291 4.4:+13359098 None:intergenic
CGGCCATGCATGGTTGTGGT+CGG 0.586326 4.4:+13358777 None:intergenic
TCAAAGGTTCCCCTTATCCC+AGG 0.588131 4.4:-13359107 MS.gene023600:intron
CCTCCGACCACAACCATGCA+TGG 0.604364 4.4:-13358780 MS.gene023600:CDS
GTGCATCCAACAACCCATGC+CGG 0.607976 4.4:+13358491 None:intergenic
TACAGGTGTAGCAGTTGCAA+AGG 0.608307 4.4:-13358868 MS.gene023600:CDS
GTTGCAAAGGTTGTCCAGCA+AGG 0.619353 4.4:-13358855 MS.gene023600:CDS
TTTCTCATCGGGTTCGACCG+GGG 0.622876 4.4:+13358708 None:intergenic
CAAGATGTGGTCCCACACCA+TGG 0.624105 4.4:+13358451 None:intergenic
TCTTGGACGACGAGTTGGGG+TGG 0.624256 4.4:-13358669 MS.gene023600:CDS
TGAGCATTGTGGGGTCCACA+CGG 0.625449 4.4:+13358815 None:intergenic
GTAGGTTATGATGAGCATTG+TGG 0.629285 4.4:+13358804 None:intergenic
GGCAGAGTTTGATGCTGACA+TGG 0.638682 4.4:-13358596 MS.gene023600:CDS
AAACCCACATACTCACCAAG+AGG 0.655223 4.4:-13359510 MS.gene023600:CDS
CGGAACACCGTAGAACACTC+CGG 0.678431 4.4:+13358511 None:intergenic
ACTCGTCGTCCAAGACCAAG+TGG 0.678707 4.4:+13358677 None:intergenic
ATGGGTTGTTGGATGCACGA+CGG 0.688177 4.4:-13358486 MS.gene023600:CDS
TGAGCCATCGATGTTAAATG+AGG 0.693765 4.4:+13359448 None:intergenic
AGGTTATGATGAGCATTGTG+GGG 0.698729 4.4:+13358806 None:intergenic
GGTTGTTGGATGCACGACGG+CGG 0.704353 4.4:-13358483 MS.gene023600:CDS
GCGAGCCATACAGAAAAGGG+TGG 0.704599 4.4:-13359232 MS.gene023600:CDS
ACAAGTAGAAAGAAGCCGTG+TGG 0.704739 4.4:-13358830 MS.gene023600:CDS
CATGCCCATGAATCTGAAGG+TGG 0.710222 4.4:+13359153 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATTAGGAAATATAATTAAT+TGG + chr4.4:13358628-13358647 None:intergenic 15.0%
!!! AAGTATATTTGGTAATTTTA+AGG - chr4.4:13359011-13359030 MS.gene023600:intron 15.0%
!!! TTTATTTTACATGACTATAT+CGG + chr4.4:13358950-13358969 None:intergenic 15.0%
!! AATTATGGTCATTAATCATT+AGG + chr4.4:13358644-13358663 None:intergenic 20.0%
!! GGAAATATAATTAATTGGAT+TGG + chr4.4:13358623-13358642 None:intergenic 20.0%
!! TTATAGATACATATATACCT+GGG + chr4.4:13358890-13358909 None:intergenic 20.0%
!! TTTATAGATACATATATACC+TGG + chr4.4:13358891-13358910 None:intergenic 20.0%
!! TTTGTATATATTGTTAAAGC+AGG - chr4.4:13358723-13358742 MS.gene023600:CDS 20.0%
! TAGATCATGACAAGTATATT+TGG - chr4.4:13359000-13359019 MS.gene023600:intron 25.0%
!! ATTTTGTAACATCTCAAGAT+CGG + chr4.4:13358681-13358700 None:intergenic 25.0%
AAGTAGAAGAAACTGAAAGT+AGG - chr4.4:13359043-13359062 MS.gene023600:intron 30.0%
ATACATATATACCTGGGATA+AGG + chr4.4:13358884-13358903 None:intergenic 30.0%
CTTCTTCTTCATCTAAGAAA+AGG - chr4.4:13358565-13358584 MS.gene023600:CDS 30.0%
TACATATATACCTGGGATAA+GGG + chr4.4:13358883-13358902 None:intergenic 30.0%
!!! CTTGTTGTAGTTTTTGAAAC+CGG + chr4.4:13359223-13359242 None:intergenic 30.0%
ACATATATACCTGGGATAAG+GGG + chr4.4:13358882-13358901 None:intergenic 35.0%
ATGTTAAATGAGGTGGAAGA+AGG + chr4.4:13358522-13358541 None:intergenic 35.0%
CTTAGATGAAGAAGAAGAGT+GGG + chr4.4:13358562-13358581 None:intergenic 35.0%
TATTCTGCAGAGTCAGATAA+TGG - chr4.4:13359360-13359379 MS.gene023600:intron 35.0%
TCTTAGATGAAGAAGAAGAG+TGG + chr4.4:13358563-13358582 None:intergenic 35.0%
TTCCTTCATCGGCAAAAAAA+CGG + chr4.4:13359410-13359429 None:intergenic 35.0%
! GATTGAGTAGTGGGAAATTA+TGG + chr4.4:13358659-13358678 None:intergenic 35.0%
! GTTTTGTCTGTGTGTGAATT+GGG - chr4.4:13359069-13359088 MS.gene023600:intron 35.0%
! TAGGTTATGATGAGCATTGT+GGG + chr4.4:13359175-13359194 None:intergenic 35.0%
! TGTTTTGTCTGTGTGTGAAT+TGG - chr4.4:13359068-13359087 MS.gene023600:intron 35.0%
AACTCATCCTCTTCCTTCAT+CGG + chr4.4:13359421-13359440 None:intergenic 40.0%
ATACACCACCTTCAGATTCA+TGG - chr4.4:13358819-13358838 MS.gene023600:CDS 40.0%
ATATGTCAGTGTCTTCCTCT+TGG + chr4.4:13358485-13358504 None:intergenic 40.0%
ATCCATGAGGTTCCTTGATT+GGG + chr4.4:13358778-13358797 None:intergenic 40.0%
CTTTCTACTTGTTTCCTTGC+TGG + chr4.4:13359139-13359158 None:intergenic 40.0%
TACACCACCTTCAGATTCAT+GGG - chr4.4:13358820-13358839 MS.gene023600:CDS 40.0%
TATGGCCAAAAACCCATCAA+AGG - chr4.4:13358854-13358873 MS.gene023600:CDS 40.0%
TCAAGATCGGATTGAGTAGT+GGG + chr4.4:13358668-13358687 None:intergenic 40.0%
TCATGGGCATGGAGAAAATA+TGG - chr4.4:13358836-13358855 MS.gene023600:CDS 40.0%
TCCACCTCATTTAACATCGA+TGG - chr4.4:13358525-13358544 MS.gene023600:CDS 40.0%
TGAGCCATCGATGTTAAATG+AGG + chr4.4:13358532-13358551 None:intergenic 40.0%
! AGGTTATGATGAGCATTGTG+GGG + chr4.4:13359174-13359193 None:intergenic 40.0%
! GTAGGTTATGATGAGCATTG+TGG + chr4.4:13359176-13359195 None:intergenic 40.0%
!!! TTTTTTGCCGATGAAGGAAG+AGG - chr4.4:13359411-13359430 MS.gene023600:intron 40.0%
AAACCCACATACTCACCAAG+AGG - chr4.4:13358467-13358486 MS.gene023600:CDS 45.0%
AAATGAGGTGGAAGAAGGAG+TGG + chr4.4:13358517-13358536 None:intergenic 45.0%
AATTTCTCATCGGGTTCGAC+CGG + chr4.4:13359274-13359293 None:intergenic 45.0%
ACAAGTAGAAAGAAGCCGTG+TGG - chr4.4:13359147-13359166 MS.gene023600:CDS 45.0%
ACATGTACAGAGCGTACTAC+AGG - chr4.4:13359092-13359111 MS.gene023600:intron 45.0%
ATCCCAATCAAGGAACCTCA+TGG - chr4.4:13358773-13358792 MS.gene023600:CDS 45.0%
CCTCATGGATCAAGGCTAAA+AGG - chr4.4:13358788-13358807 MS.gene023600:CDS 45.0%
CTCAAGATCGGATTGAGTAG+TGG + chr4.4:13358669-13358688 None:intergenic 45.0%
CTTCCTCTTGGTGAGTATGT+GGG + chr4.4:13358473-13358492 None:intergenic 45.0%
GAACCCGATGAGAAATTTGC+AGG - chr4.4:13359277-13359296 MS.gene023600:intron 45.0%
GATCCATGAGGTTCCTTGAT+TGG + chr4.4:13358779-13358798 None:intergenic 45.0%
GCCATCGATGTTAAATGAGG+TGG + chr4.4:13358529-13358548 None:intergenic 45.0%
GGATAAGGGGAACCTTTGAT+GGG + chr4.4:13358869-13358888 None:intergenic 45.0%
GTGGCCTGCAAATTTCTCAT+CGG + chr4.4:13359284-13359303 None:intergenic 45.0%
TACAGGTGTAGCAGTTGCAA+AGG - chr4.4:13359109-13359128 MS.gene023600:CDS 45.0%
TCAAGGAACCTCATGGATCA+AGG - chr4.4:13358780-13358799 MS.gene023600:CDS 45.0%
TCTTCCTCTTGGTGAGTATG+TGG + chr4.4:13358474-13358493 None:intergenic 45.0%
TGAGAAATTTGCAGGCCACT+TGG - chr4.4:13359285-13359304 MS.gene023600:intron 45.0%
TGGCCTGCAAATTTCTCATC+GGG + chr4.4:13359283-13359302 None:intergenic 45.0%
! TTGCACCACCCTTTTCTGTA+TGG + chr4.4:13358753-13358772 None:intergenic 45.0%
!!! CCTTTTAGCCTTGATCCATG+AGG + chr4.4:13358791-13358810 None:intergenic 45.0%
!!! GAGTTGCTTTTTGCTGACCT+TGG - chr4.4:13359436-13359455 MS.gene023600:CDS 45.0%
!!! GGGAACCTTTGATGGGTTTT+TGG + chr4.4:13358862-13358881 None:intergenic 45.0%
!!! GTCCGTTTTTTTGCCGATGA+AGG - chr4.4:13359405-13359424 MS.gene023600:intron 45.0%
!!! TTTTTGAAACCGGCCATGCA+TGG + chr4.4:13359213-13359232 None:intergenic 45.0%
ATTTCTCATCGGGTTCGACC+GGG + chr4.4:13359273-13359292 None:intergenic 50.0%
ATTTGCAGGCCACTTGGTCT+TGG - chr4.4:13359291-13359310 MS.gene023600:intron 50.0%
CACCTTCAGATTCATGGGCA+TGG - chr4.4:13358825-13358844 MS.gene023600:CDS 50.0%
CAGGCGAGCCATACAGAAAA+GGG - chr4.4:13358742-13358761 MS.gene023600:CDS 50.0%
CATGCCCATGAATCTGAAGG+TGG + chr4.4:13358827-13358846 None:intergenic 50.0%
CTCCATGCCCATGAATCTGA+AGG + chr4.4:13358830-13358849 None:intergenic 50.0%
GGCAGAGTTTGATGCTGACA+TGG - chr4.4:13359381-13359400 MS.gene023600:intron 50.0%
GGGATAAGGGGAACCTTTGA+TGG + chr4.4:13358870-13358889 None:intergenic 50.0%
GGTGGTGCAAATCCCAATCA+AGG - chr4.4:13358763-13358782 MS.gene023600:CDS 50.0%
GTTGCAAAGGTTGTCCAGCA+AGG - chr4.4:13359122-13359141 MS.gene023600:CDS 50.0%
TCAAAGGTTCCCCTTATCCC+AGG - chr4.4:13358870-13358889 MS.gene023600:CDS 50.0%
! AGAGTTGCCGGAGTGTTCTA+CGG - chr4.4:13359459-13359478 MS.gene023600:CDS 50.0%
! ATGGGTTGTTGGATGCACGA+CGG - chr4.4:13359491-13359510 MS.gene023600:CDS 50.0%
!! TTGGTCTTGGACGACGAGTT+GGG - chr4.4:13359304-13359323 MS.gene023600:intron 50.0%
!!! GGCTGGTTCGGTTTTCTTGA+GGG + chr4.4:13359251-13359270 None:intergenic 50.0%
AAACCGGCCATGCATGGTTG+TGG + chr4.4:13359207-13359226 None:intergenic 55.0%
AACACTCCGGCAACTCTCCA+AGG + chr4.4:13359456-13359475 None:intergenic 55.0%
ACTCGTCGTCCAAGACCAAG+TGG + chr4.4:13359303-13359322 None:intergenic 55.0%
ATGGTTGTGGTCGGAGGAGT+AGG + chr4.4:13359194-13359213 None:intergenic 55.0%
CAAGAAAACCGAACCAGCCC+CGG - chr4.4:13359252-13359271 MS.gene023600:intron 55.0%
CAAGATGTGGTCCCACACCA+TGG + chr4.4:13359529-13359548 None:intergenic 55.0%
CGGAACACCGTAGAACACTC+CGG + chr4.4:13359469-13359488 None:intergenic 55.0%
GCAGGCGAGCCATACAGAAA+AGG - chr4.4:13358741-13358760 MS.gene023600:CDS 55.0%
GCGAGCCATACAGAAAAGGG+TGG - chr4.4:13358745-13358764 MS.gene023600:CDS 55.0%
GGTTAACGGCTCCATGGTGT+GGG - chr4.4:13359515-13359534 MS.gene023600:CDS 55.0%
GTGCATCCAACAACCCATGC+CGG + chr4.4:13359489-13359508 None:intergenic 55.0%
GTTCTACGGTGTTCCGGCAT+GGG - chr4.4:13359473-13359492 MS.gene023600:CDS 55.0%
TGCTGACCTTGGAGAGTTGC+CGG - chr4.4:13359447-13359466 MS.gene023600:CDS 55.0%
TGTTCTACGGTGTTCCGGCA+TGG - chr4.4:13359472-13359491 MS.gene023600:CDS 55.0%
TTTCTCATCGGGTTCGACCG+GGG + chr4.4:13359272-13359291 None:intergenic 55.0%
! CGGAGTGTTCTACGGTGTTC+CGG - chr4.4:13359467-13359486 MS.gene023600:CDS 55.0%
! TGAGCATTGTGGGGTCCACA+CGG + chr4.4:13359165-13359184 None:intergenic 55.0%
! TGGTCTTGGACGACGAGTTG+GGG - chr4.4:13359305-13359324 MS.gene023600:intron 55.0%
!! CTTGGTCTTGGACGACGAGT+TGG - chr4.4:13359303-13359322 MS.gene023600:intron 55.0%
!!! GGGCTGGTTCGGTTTTCTTG+AGG + chr4.4:13359252-13359271 None:intergenic 55.0%
CCATGCATGGTTGTGGTCGG+AGG + chr4.4:13359200-13359219 None:intergenic 60.0%
CCTCCGACCACAACCATGCA+TGG - chr4.4:13359197-13359216 MS.gene023600:CDS 60.0%
CGACCACAACCATGCATGGC+CGG - chr4.4:13359201-13359220 MS.gene023600:CDS 60.0%
CGGCCATGCATGGTTGTGGT+CGG + chr4.4:13359203-13359222 None:intergenic 60.0%
CGGTTAACGGCTCCATGGTG+TGG - chr4.4:13359514-13359533 MS.gene023600:CDS 60.0%
GGATGCACGACGGCGGTTAA+CGG - chr4.4:13359501-13359520 MS.gene023600:CDS 60.0%
GGTTGTTGGATGCACGACGG+CGG - chr4.4:13359494-13359513 MS.gene023600:CDS 60.0%
! GACGACGAGTTGGGGTGGTT+GGG - chr4.4:13359313-13359332 MS.gene023600:intron 60.0%
! GGTGTTCCGGCATGGGTTGT+TGG - chr4.4:13359480-13359499 MS.gene023600:CDS 60.0%
! TCTTGGACGACGAGTTGGGG+TGG - chr4.4:13359308-13359327 MS.gene023600:intron 60.0%
GACGGCGGTTAACGGCTCCA+TGG - chr4.4:13359509-13359528 MS.gene023600:CDS 65.0%
! GGACGACGAGTTGGGGTGGT+TGG - chr4.4:13359312-13359331 MS.gene023600:intron 65.0%
TCATCGGGTTCGACCGGGGC+TGG + chr4.4:13359268-13359287 None:intergenic 70.0%
!! GGGTTCGACCGGGGCTGGTT+CGG + chr4.4:13359263-13359282 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 13358450 13359549 13358450 ID=MS.gene023600
chr4.4 mRNA 13358450 13359549 13358450 ID=MS.gene023600.t1;Parent=MS.gene023600
chr4.4 exon 13359413 13359549 13359413 ID=MS.gene023600.t1.exon1;Parent=MS.gene023600.t1
chr4.4 CDS 13359413 13359549 13359413 ID=cds.MS.gene023600.t1;Parent=MS.gene023600.t1
chr4.4 exon 13359108 13359257 13359108 ID=MS.gene023600.t1.exon2;Parent=MS.gene023600.t1
chr4.4 CDS 13359108 13359257 13359108 ID=cds.MS.gene023600.t1;Parent=MS.gene023600.t1
chr4.4 exon 13358450 13358897 13358450 ID=MS.gene023600.t1.exon3;Parent=MS.gene023600.t1
chr4.4 CDS 13358450 13358897 13358450 ID=cds.MS.gene023600.t1;Parent=MS.gene023600.t1
Gene Sequence

>MS.gene023600

ATGAAAAGAAAATTCAAAAACCCACATACTCACCAAGAGGAAGACACTGACATATCTCAAGATTCCACTCCTTCTTCCACCTCATTTAACATCGATGGCTCAGTCACTTCCCACTCTTCTTCTTCATCTAAGAAAAGGTTAGTACACACACTTATACTCTAATTACACATCCAATCCAATTAATTATATTTCCTAATGATTAATGACCATAATTTCCCACTACTCAATCCGATCTTGAGATGTTACAAAATTAAAAATAATAATCTGAATTGTTTTGTATATATTGTTAAAGCAGGCGAGCCATACAGAAAAGGGTGGTGCAAATCCCAATCAAGGAACCTCATGGATCAAGGCTAAAAGGAGAGAGTAATACACCACCTTCAGATTCATGGGCATGGAGAAAATATGGCCAAAAACCCATCAAAGGTTCCCCTTATCCCAGGTATATATGTATCTATAAATGTAATCTAATGTAATGTAGCAACTAATTAAATATACCGATATAGTCATGTAAAATAAAAATAAATCATTTTATTGCATCTTATATGTTTAGATCATGACAAGTATATTTGGTAATTTTAAGGTTTGTGTGAAAGTAGAAGAAACTGAAAGTAGGTTTGTTTTGTCTGTGTGTGAATTGGGACATGTACAGAGCGTACTACAGGTGTAGCAGTTGCAAAGGTTGTCCAGCAAGGAAACAAGTAGAAAGAAGCCGTGTGGACCCCACAATGCTCATCATAACCTACTCCTCCGACCACAACCATGCATGGCCGGTTTCAAAAACTACAACAAGACTCTCCCTCAAGAAAACCGAACCAGCCCCGGTCGAACCCGATGAGAAATTTGCAGGCCACTTGGTCTTGGACGACGAGTTGGGGTGGTTGGGAGAGATAGACACAAAGTCATCAGCTATTCTGCAGAGTCAGATAATGGCAGAGTTTGATGCTGACATGGCGTCCGTTTTTTTGCCGATGAAGGAAGAGGATGAGTTGCTTTTTGCTGACCTTGGAGAGTTGCCGGAGTGTTCTACGGTGTTCCGGCATGGGTTGTTGGATGCACGACGGCGGTTAACGGCTCCATGGTGTGGGACCACATCTTGA
Protein sequence

>MS.gene023600.t1

MKRKFKNPHTHQEEDTDISQDSTPSSTSFNIDGSVTSHSSSSSKKSRRAIQKRVVQIPIKEPHGSRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRAYYRCSSCKGCPARKQVERSRVDPTMLIITYSSDHNHAWPVSKTTTRLSLKKTEPAPVEPDEKFAGHLVLDDELGWLGEIDTKSSAILQSQIMAEFDADMASVFLPMKEEDELLFADLGELPECSTVFRHGLLDARRRLTAPWCGTTS