Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023626.t1 | XP_003629867.1 | 59.2 | 918 | 26 | 1 | 1 | 918 | 110 | 678 | 5.50E-259 | 904 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023626.t1 | Q9ZP55 | 52.1 | 555 | 239 | 5 | 1 | 530 | 104 | 656 | 7.7e-153 | 542.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023626.t1 | G7L7C0 | 59.2 | 918 | 26 | 1 | 1 | 918 | 110 | 678 | 4.0e-259 | 904.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene023626 | MS.gene32695 | PPI |
| MS.gene80193 | MS.gene023626 | PPI |
| MS.gene014901 | MS.gene023626 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023626.t1 | MTR_8g087770 | 76.678 | 566 | 104 | 3 | 1 | 542 | 107 | 668 | 0.0 | 875 |
| MS.gene023626.t1 | MTR_8g087770 | 76.750 | 400 | 88 | 2 | 519 | 917 | 276 | 671 | 0.0 | 622 |
| MS.gene023626.t1 | MTR_8g087750 | 74.690 | 565 | 116 | 2 | 1 | 542 | 110 | 670 | 0.0 | 859 |
| MS.gene023626.t1 | MTR_8g087750 | 97.733 | 397 | 9 | 0 | 522 | 918 | 282 | 678 | 0.0 | 799 |
| MS.gene023626.t1 | MTR_8g087763 | 88.318 | 214 | 25 | 0 | 267 | 480 | 4 | 217 | 3.07e-132 | 400 |
| MS.gene023626.t1 | MTR_8g087763 | 72.000 | 225 | 63 | 0 | 616 | 840 | 4 | 228 | 1.20e-114 | 355 |
| MS.gene023626.t1 | MTR_4g085860 | 76.316 | 76 | 17 | 1 | 99 | 173 | 2 | 77 | 1.63e-30 | 115 |
| MS.gene023626.t1 | MTR_6g045107 | 75.000 | 76 | 18 | 1 | 99 | 173 | 2 | 77 | 1.21e-28 | 110 |
| MS.gene023626.t1 | MTR_4g093750 | 30.030 | 333 | 212 | 7 | 25 | 345 | 102 | 425 | 2.91e-26 | 115 |
| MS.gene023626.t1 | MTR_4g093750 | 36.406 | 217 | 122 | 4 | 25 | 230 | 102 | 313 | 1.25e-25 | 114 |
| MS.gene023626.t1 | MTR_2g009690 | 33.884 | 242 | 152 | 3 | 25 | 259 | 111 | 351 | 9.59e-25 | 111 |
| MS.gene023626.t1 | MTR_5g009150 | 26.733 | 404 | 262 | 13 | 24 | 411 | 99 | 484 | 7.43e-19 | 92.0 |
| MS.gene023626.t1 | MTR_1g032550 | 29.880 | 251 | 156 | 6 | 24 | 262 | 99 | 341 | 1.78e-18 | 90.9 |
| MS.gene023626.t1 | MTR_8g105580 | 31.963 | 219 | 131 | 5 | 24 | 230 | 98 | 310 | 1.10e-17 | 88.2 |
| MS.gene023626.t1 | MTR_8g105580 | 31.963 | 219 | 131 | 5 | 24 | 230 | 98 | 310 | 1.26e-17 | 87.8 |
| MS.gene023626.t1 | MTR_7g451010 | 32.456 | 228 | 132 | 6 | 24 | 239 | 104 | 321 | 1.42e-17 | 87.8 |
| MS.gene023626.t1 | MTR_8g099550 | 30.040 | 253 | 153 | 7 | 24 | 262 | 98 | 340 | 5.23e-17 | 86.3 |
| MS.gene023626.t1 | MTR_8g009510 | 31.298 | 262 | 155 | 8 | 15 | 262 | 96 | 346 | 6.54e-17 | 85.9 |
| MS.gene023626.t1 | MTR_8g009510 | 31.452 | 248 | 146 | 7 | 29 | 262 | 2 | 239 | 1.73e-16 | 84.3 |
| MS.gene023626.t1 | MTR_4g098920 | 30.620 | 258 | 153 | 8 | 20 | 262 | 94 | 340 | 3.81e-16 | 83.2 |
| MS.gene023626.t1 | MTR_8g027675 | 38.060 | 134 | 77 | 2 | 24 | 157 | 97 | 224 | 7.10e-16 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023626.t1 | AT1G60500 | 52.072 | 555 | 239 | 5 | 1 | 530 | 104 | 656 | 0.0 | 579 |
| MS.gene023626.t1 | AT1G60500 | 48.866 | 397 | 199 | 3 | 519 | 913 | 273 | 667 | 4.97e-132 | 412 |
| MS.gene023626.t1 | AT1G60530 | 72.500 | 200 | 55 | 0 | 1 | 200 | 101 | 300 | 4.29e-93 | 296 |
| MS.gene023626.t1 | AT2G14120 | 28.037 | 321 | 218 | 7 | 33 | 345 | 122 | 437 | 1.38e-24 | 110 |
| MS.gene023626.t1 | AT2G14120 | 28.037 | 321 | 218 | 7 | 33 | 345 | 122 | 437 | 1.55e-24 | 110 |
| MS.gene023626.t1 | AT2G14120 | 28.037 | 321 | 218 | 7 | 33 | 345 | 122 | 437 | 1.60e-24 | 110 |
| MS.gene023626.t1 | AT2G14120 | 32.883 | 222 | 141 | 3 | 25 | 239 | 114 | 334 | 2.08e-24 | 110 |
| MS.gene023626.t1 | AT4G33650 | 28.037 | 321 | 218 | 7 | 33 | 345 | 137 | 452 | 2.83e-24 | 110 |
| MS.gene023626.t1 | AT4G33650 | 28.037 | 321 | 218 | 7 | 33 | 345 | 137 | 452 | 3.06e-24 | 109 |
| MS.gene023626.t1 | AT1G14830 | 28.400 | 250 | 169 | 4 | 20 | 262 | 95 | 341 | 7.99e-19 | 92.0 |
| MS.gene023626.t1 | AT5G42080 | 26.683 | 401 | 266 | 10 | 24 | 411 | 98 | 483 | 1.07e-17 | 88.6 |
| MS.gene023626.t1 | AT5G42080 | 26.683 | 401 | 266 | 10 | 24 | 411 | 98 | 483 | 1.07e-17 | 88.6 |
| MS.gene023626.t1 | AT3G60190 | 28.400 | 250 | 169 | 4 | 20 | 262 | 100 | 346 | 1.18e-17 | 88.2 |
| MS.gene023626.t1 | AT5G42080 | 30.242 | 248 | 159 | 5 | 24 | 262 | 98 | 340 | 4.39e-17 | 86.3 |
| MS.gene023626.t1 | AT2G44590 | 27.132 | 258 | 172 | 6 | 29 | 279 | 104 | 352 | 4.83e-17 | 86.3 |
| MS.gene023626.t1 | AT5G42080 | 30.242 | 248 | 159 | 5 | 24 | 262 | 98 | 340 | 5.79e-17 | 85.1 |
| MS.gene023626.t1 | AT3G61760 | 34.568 | 162 | 99 | 3 | 3 | 161 | 74 | 231 | 2.35e-15 | 80.9 |
| MS.gene023626.t1 | AT3G61760 | 34.568 | 162 | 99 | 3 | 3 | 161 | 74 | 231 | 3.15e-15 | 80.5 |
| MS.gene023626.t1 | AT3G61760 | 36.364 | 143 | 86 | 2 | 20 | 161 | 93 | 231 | 3.98e-15 | 79.7 |
Find 143 sgRNAs with CRISPR-Local
Find 179 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAGTCTCCGTCTATTTC+TGG | 0.150723 | 4.4:+13170483 | MS.gene023626:CDS |
| ACACTTTCAACAAAATTAAT+TGG | 0.173861 | 4.4:-13168632 | None:intergenic |
| CTTGAGGAAGCCAAATTTAT+TGG | 0.191059 | 4.4:+13168536 | MS.gene023626:CDS |
| ATTCGGAAGACCAATAAATT+TGG | 0.194065 | 4.4:-13168546 | None:intergenic |
| AGTCTCACTCACTTCTTTCT+AGG | 0.252212 | 4.4:+13169443 | MS.gene023626:CDS |
| GCAGTTCTTGGCATGAAATT+TGG | 0.255839 | 4.4:-13169874 | None:intergenic |
| CATATGTTGAATCAGGCTTA+TGG | 0.274355 | 4.4:+13168980 | MS.gene023626:CDS |
| TATTGTTGGAATTCCTGTTT+TGG | 0.276334 | 4.4:+13168166 | MS.gene023626:CDS |
| TAACATTTATGATCTGATTA+AGG | 0.293521 | 4.4:+13167824 | MS.gene023626:CDS |
| GAGGAGTCTCCTTCAATATC+AGG | 0.303692 | 4.4:+13169173 | MS.gene023626:CDS |
| TTCAAATTATTATCAGCTTC+AGG | 0.310159 | 4.4:+13170014 | MS.gene023626:CDS |
| TTCTAACTATTATCAGCTTC+AGG | 0.313313 | 4.4:+13168703 | MS.gene023626:CDS |
| ATCAGATCATAAATGTTATC+AGG | 0.314340 | 4.4:-13167819 | None:intergenic |
| AGGCCAGATTGATAGCTTAT+TGG | 0.323518 | 4.4:+13169009 | MS.gene023626:CDS |
| AGTATTTGCTCGAGTATAAT+AGG | 0.323700 | 4.4:+13170151 | MS.gene023626:CDS |
| TTAACTTTGTTGATAATGTT+TGG | 0.326087 | 4.4:+13169947 | MS.gene023626:CDS |
| TCCACAGCCAGAGCTTGTTT+TGG | 0.330947 | 4.4:+13167602 | MS.gene023626:CDS |
| GGAGACTGTTGCAAGAATTA+TGG | 0.333112 | 4.4:+13170554 | MS.gene023626:CDS |
| TCACAAACTGTTGATAAAAC+TGG | 0.334047 | 4.4:+13167942 | MS.gene023626:CDS |
| CCTTACTTCAGAGAAAAGTT+AGG | 0.351453 | 4.4:+13168594 | MS.gene023626:CDS |
| TTTAGCTCAGAAGCTTGTTC+AGG | 0.351831 | 4.4:+13169495 | MS.gene023626:CDS |
| TGAAAGTGTATGGAATTATC+TGG | 0.352378 | 4.4:+13168646 | MS.gene023626:CDS |
| CTTACTATGGTTGATCTTCC+AGG | 0.352429 | 4.4:+13167768 | MS.gene023626:CDS |
| GAACTTTGATCTCCTCCATT+AGG | 0.358271 | 4.4:-13168514 | None:intergenic |
| TAAGAAGATTAATGAGAAAC+TGG | 0.360082 | 4.4:+13168247 | MS.gene023626:CDS |
| GCAGTTCTTGGCATGAAATT+CGG | 0.376721 | 4.4:-13168563 | None:intergenic |
| GCCTGCTAATTTATCCTCAC+TGG | 0.379029 | 4.4:+13168298 | MS.gene023626:CDS |
| TGGAGTTCCTGATCTTACTA+TGG | 0.379945 | 4.4:+13167755 | MS.gene023626:CDS |
| AGGCTAGGATGATTGCTTAC+TGG | 0.386618 | 4.4:+13170319 | MS.gene023626:CDS |
| TAAATCTCCTGAAGGTTTGC+TGG | 0.387244 | 4.4:+13167998 | MS.gene023626:CDS |
| AAGTTCAGTCCAACATGTTA+TGG | 0.389392 | 4.4:+13170083 | MS.gene023626:CDS |
| TTCAAAATAATACTCTCTTC+AGG | 0.392099 | 4.4:-13167870 | None:intergenic |
| AACAATAGATTTGTCTATCC+TGG | 0.395168 | 4.4:-13168150 | None:intergenic |
| ATAACTCGTGTTCCTGTTCA+TGG | 0.396246 | 4.4:+13167792 | MS.gene023626:CDS |
| ACCTTCTCCAGCAAACCTTC+AGG | 0.399453 | 4.4:-13168005 | None:intergenic |
| ACATTATCAACAAAGTTAAC+TGG | 0.400837 | 4.4:-13169943 | None:intergenic |
| CAAAGTTCTTAGAGAAAGTA+AGG | 0.404659 | 4.4:+13170533 | MS.gene023626:CDS |
| TTACTACTTGTGAGTCGATA+AGG | 0.405010 | 4.4:+13167916 | MS.gene023626:CDS |
| TGTCTCTTCCCTGATATTGA+AGG | 0.410432 | 4.4:-13169182 | None:intergenic |
| TTAATCTTCTTGATGATCTC+TGG | 0.410614 | 4.4:-13169547 | None:intergenic |
| TTAATCTTCTTAATGATCTC+TGG | 0.413053 | 4.4:-13168236 | None:intergenic |
| GACGATGTTAACATTGGTCT+TGG | 0.414913 | 4.4:+13168035 | MS.gene023626:CDS |
| AATCAGGCTTATGGATTTGA+AGG | 0.417648 | 4.4:+13168989 | MS.gene023626:CDS |
| GTATCCACATATGTTGAATC+AGG | 0.422119 | 4.4:+13168973 | MS.gene023626:CDS |
| AATACTGCAGAGAAAAGTTA+AGG | 0.423316 | 4.4:+13169906 | MS.gene023626:CDS |
| AAGGTCAGAAAAGCAGTTCT+TGG | 0.424321 | 4.4:-13168575 | None:intergenic |
| ACAGCCACTGAGGAGCTTGC+TGG | 0.430442 | 4.4:+13167681 | MS.gene023626:CDS |
| CAGGTTTCCACTCGCAGAGC+AGG | 0.433533 | 4.4:+13170033 | MS.gene023626:CDS |
| GTCTTGGTTATGTTTGTGTA+AGG | 0.435750 | 4.4:+13168051 | MS.gene023626:CDS |
| CCAACACATGTGAAGCTTGA+AGG | 0.436407 | 4.4:+13170228 | MS.gene023626:CDS |
| TTTCCAATAAGCTATCAATC+TGG | 0.441151 | 4.4:-13169012 | None:intergenic |
| ATGCTATGAAGATGCTAGAT+TGG | 0.442753 | 4.4:+13169402 | MS.gene023626:CDS |
| TGGGGTGTTGGAAATCCCTT+TGG | 0.443439 | 4.4:-13167709 | None:intergenic |
| CAATGCATGTGCTTGTCCTC+AGG | 0.447247 | 4.4:-13169721 | None:intergenic |
| CTTACTTCAGAGAAAAGTTA+GGG | 0.447328 | 4.4:+13168595 | MS.gene023626:CDS |
| GGCTACTAGTTTGCATGAGC+TGG | 0.448592 | 4.4:+13168268 | MS.gene023626:CDS |
| ATGTAACCCTGAGTACTTGC+AGG | 0.450401 | 4.4:+13168829 | MS.gene023626:CDS |
| AGGATTGACAAATCCATTGT+TGG | 0.451509 | 4.4:+13169463 | MS.gene023626:CDS |
| AGGATAGACAAATCTATTGT+TGG | 0.453655 | 4.4:+13168152 | MS.gene023626:CDS |
| CTCCATTAGGAAATCCTTAG+TGG | 0.456157 | 4.4:-13168501 | None:intergenic |
| ATTTGGTAGACCAATCCATT+TGG | 0.458705 | 4.4:-13169857 | None:intergenic |
| TTATACTCCTGCAAGTACTC+AGG | 0.459259 | 4.4:-13168836 | None:intergenic |
| ACAAGCTTCTGAGCTAAAAC+AGG | 0.462376 | 4.4:-13169490 | None:intergenic |
| TATGGAAGAGATTAAGGTGT+TGG | 0.462977 | 4.4:+13169828 | MS.gene023626:CDS |
| TCTTTACTATCAAAGTCAGT+GGG | 0.470875 | 4.4:-13167728 | None:intergenic |
| GAGCTTGCTGGCACTGCCAA+AGG | 0.478600 | 4.4:+13167693 | MS.gene023626:CDS |
| CCTTCAAGCTTCACATGTGT+TGG | 0.480389 | 4.4:-13170228 | None:intergenic |
| TCCTGAAGGTTTGCTGGAGA+AGG | 0.484851 | 4.4:+13168004 | MS.gene023626:CDS |
| AGCTTGAAGCACATGCTGAA+TGG | 0.486139 | 4.4:-13168777 | None:intergenic |
| CTCTAAGAACTTTGACACTT+CGG | 0.488083 | 4.4:-13170524 | None:intergenic |
| CTCCGTCTATTTCTGGAAAG+AGG | 0.488105 | 4.4:+13170490 | MS.gene023626:CDS |
| TTATACTCCAAAACAAGCTC+TGG | 0.492061 | 4.4:-13167609 | None:intergenic |
| TATCAAAGTCAGTGGGGTGT+TGG | 0.492352 | 4.4:-13167721 | None:intergenic |
| AATGCATTGCACAGCTCGAT+TGG | 0.492439 | 4.4:+13168424 | MS.gene023626:CDS |
| TTATCAGGTTGACCATGAAC+AGG | 0.495576 | 4.4:-13167804 | None:intergenic |
| AGGTGTTGGAAGAGGCCAAA+TGG | 0.496352 | 4.4:+13169842 | MS.gene023626:CDS |
| TTACCCTCATGTGCTAAGTC+AGG | 0.501551 | 4.4:+13170284 | MS.gene023626:CDS |
| TGCTGAAAGTAATGCCACTA+AGG | 0.502696 | 4.4:+13168487 | MS.gene023626:CDS |
| GCAACAGAAGATAAATTAGC+AGG | 0.505796 | 4.4:-13169610 | None:intergenic |
| TGCCACTAAGGATTTCCTAA+TGG | 0.506730 | 4.4:+13168499 | MS.gene023626:CDS |
| GCAAGAATTATGGACAGGAT+TGG | 0.508761 | 4.4:+13170564 | MS.gene023626:CDS |
| GTTTGTGTAAGGAATCGAAT+TGG | 0.512590 | 4.4:+13168062 | MS.gene023626:CDS |
| TATGTGGATACTTCATAAGA+TGG | 0.516380 | 4.4:-13168961 | None:intergenic |
| CAAGCTCTGGCTGTGGAAGT+TGG | 0.517438 | 4.4:-13167596 | None:intergenic |
| CTTATTGGAAAATTGTGCTC+CGG | 0.520290 | 4.4:+13169024 | MS.gene023626:CDS |
| GCCAGTGAGGATAAATTAGC+AGG | 0.522213 | 4.4:-13168299 | None:intergenic |
| AGATCAACCATAGTAAGATC+AGG | 0.522883 | 4.4:-13167762 | None:intergenic |
| CTCTCAATCCCACCACCACT+TGG | 0.524638 | 4.4:-13170453 | None:intergenic |
| TCCAAAACAAGCTCTGGCTG+TGG | 0.524796 | 4.4:-13167603 | None:intergenic |
| TTGGAAGAGGCCAAATGGAT+TGG | 0.525795 | 4.4:+13169847 | MS.gene023626:CDS |
| AGAGATTAAGGTGTTGGAAG+AGG | 0.526369 | 4.4:+13169834 | MS.gene023626:CDS |
| AGTGTCACACACTTCTGTCC+AGG | 0.532120 | 4.4:+13168132 | MS.gene023626:CDS |
| AATGAACTGTTATCAGCAAA+TGG | 0.537861 | 4.4:+13169128 | MS.gene023626:CDS |
| TAAGCCTGATTCAACATATG+TGG | 0.542421 | 4.4:-13168977 | None:intergenic |
| CTGTTGCAAGAATTATGGAC+AGG | 0.542640 | 4.4:+13170559 | MS.gene023626:CDS |
| TCTGATTAAGGATATTATCA+TGG | 0.543580 | 4.4:+13167836 | MS.gene023626:CDS |
| AGCTTGCTGGCACTGCCAAA+GGG | 0.547647 | 4.4:+13167694 | MS.gene023626:CDS |
| GCTCTGGCTGTGGAAGTTGG+TGG | 0.550080 | 4.4:-13167593 | None:intergenic |
| ATACTGCAGAGAAAAGTTAA+GGG | 0.552698 | 4.4:+13169907 | MS.gene023626:CDS |
| GGAGGAGATCAAAGTTCTTG+AGG | 0.553867 | 4.4:+13168520 | MS.gene023626:CDS |
| AATGCATGTGCTTGTCCTCA+GGG | 0.555069 | 4.4:-13169720 | None:intergenic |
| CAAGTGGTGGTGGGATTGAG+AGG | 0.561054 | 4.4:+13170454 | MS.gene023626:CDS |
| ACTTTGATAGTAAAGAAGAA+TGG | 0.569006 | 4.4:+13167735 | MS.gene023626:CDS |
| TCAAGTACTGTGAAGCTGAA+AGG | 0.569995 | 4.4:+13168917 | MS.gene023626:CDS |
| TCCCTCTTTCCAGAAATAGA+CGG | 0.574959 | 4.4:-13170492 | None:intergenic |
| TCCGTCTATTTCTGGAAAGA+GGG | 0.578371 | 4.4:+13170491 | MS.gene023626:CDS |
| AGTGCCAGCAAGCTCCTCAG+TGG | 0.578957 | 4.4:-13167685 | None:intergenic |
| TTCTTTACTATCAAAGTCAG+TGG | 0.579933 | 4.4:-13167729 | None:intergenic |
| TATACTCCTGCAAGTACTCA+GGG | 0.580347 | 4.4:-13168835 | None:intergenic |
| AGGAGTCTCCTTCAATATCA+GGG | 0.586223 | 4.4:+13169174 | MS.gene023626:CDS |
| ACTGGAAGATTGTTCTGAGG+AGG | 0.593317 | 4.4:+13170337 | MS.gene023626:CDS |
| CAACAGCTTCCATAACATGT+TGG | 0.595030 | 4.4:-13170092 | None:intergenic |
| TGTTATGGAAGCTGTTGAGA+TGG | 0.595595 | 4.4:+13170098 | MS.gene023626:CDS |
| GATTAACAATGATTTGCAGA+AGG | 0.597025 | 4.4:+13170407 | MS.gene023626:CDS |
| AAGGCTGATAAATCTCCTGA+AGG | 0.599516 | 4.4:+13167990 | MS.gene023626:CDS |
| AAAGCCTGACTTAGCACATG+AGG | 0.603423 | 4.4:-13170288 | None:intergenic |
| CACTAAGGATTTCCTAATGG+AGG | 0.603754 | 4.4:+13168502 | MS.gene023626:CDS |
| CTTACTGGAAGATTGTTCTG+AGG | 0.604360 | 4.4:+13170334 | MS.gene023626:CDS |
| AACGCTTGCTGTCGTGACAA+AGG | 0.611997 | 4.4:+13167971 | MS.gene023626:CDS |
| CAAGCAAGTTTCAACTGATG+AGG | 0.612510 | 4.4:+13167635 | MS.gene023626:CDS |
| TTTCTCGCCTGCTCTGCGAG+TGG | 0.614106 | 4.4:-13170040 | None:intergenic |
| ACAGGAACACGAGTTATACC+TGG | 0.615115 | 4.4:-13167786 | None:intergenic |
| TGGTGTTGAGAGGCTGCTTG+AGG | 0.618613 | 4.4:+13169154 | MS.gene023626:CDS |
| TGTGCTTCAAGCTGTTGAGA+TGG | 0.619725 | 4.4:+13168787 | MS.gene023626:CDS |
| ATTGGAAAATTGTGCTCCGG+AGG | 0.621567 | 4.4:+13169027 | MS.gene023626:CDS |
| GCAGGAGTATAACAAGCTGA+TGG | 0.621625 | 4.4:+13168847 | MS.gene023626:CDS |
| ACAGCTGACGATGTTAACAT+TGG | 0.623909 | 4.4:+13168029 | MS.gene023626:CDS |
| AAGAGTCTTACGAAGATGCA+AGG | 0.624326 | 4.4:+13168087 | MS.gene023626:CDS |
| GATTTGCAGAAAAGCAGACA+TGG | 0.624535 | 4.4:-13168327 | None:intergenic |
| CTGTTATCAGCAAATGGTGG+TGG | 0.626367 | 4.4:+13169134 | MS.gene023626:CDS |
| TAAAACAGGAATACCAACAA+TGG | 0.629558 | 4.4:-13169476 | None:intergenic |
| TTATACTCGAGCAAATACTC+AGG | 0.634135 | 4.4:-13170147 | None:intergenic |
| CAAATGGTGGTGGTGTTGAG+AGG | 0.637671 | 4.4:+13169144 | MS.gene023626:CDS |
| ACTGTGAAGCTGAAAGGTGT+TGG | 0.640769 | 4.4:+13168923 | MS.gene023626:CDS |
| AAATTGATGTTGTTAATCTG+AGG | 0.650762 | 4.4:+13170259 | MS.gene023626:CDS |
| AAGCCTGACTTAGCACATGA+GGG | 0.658164 | 4.4:-13170287 | None:intergenic |
| TGCTATAAACACAGCCACTG+AGG | 0.658388 | 4.4:+13167671 | MS.gene023626:CDS |
| AGACATGGCATCAGCCAGTG+AGG | 0.673951 | 4.4:-13168312 | None:intergenic |
| CATGTGAAGCTTGAAGGTGT+TGG | 0.674753 | 4.4:+13170234 | MS.gene023626:CDS |
| CTTTACTATCAAAGTCAGTG+GGG | 0.697240 | 4.4:-13167727 | None:intergenic |
| TTACTTCAGAGAAAAGTTAG+GGG | 0.725881 | 4.4:+13168596 | MS.gene023626:CDS |
| GAACTGTTATCAGCAAATGG+TGG | 0.747464 | 4.4:+13169131 | MS.gene023626:CDS |
| TGATTTCGAAGAGTACCCTG+AGG | 0.804578 | 4.4:+13169705 | MS.gene023626:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACACTTTCAACAAAATTAAT+TGG | - | chr4.4:13168635-13168654 | None:intergenic | 20.0% |
| !! | CTGAAAAAAATTCTTCTTAT+AGG | + | chr4.4:13168371-13168390 | MS.gene023626:CDS | 20.0% |
| !! | TAACATTTATGATCTGATTA+AGG | + | chr4.4:13167824-13167843 | MS.gene023626:CDS | 20.0% |
| !!! | TTAACTTTGTTGATAATGTT+TGG | + | chr4.4:13169947-13169966 | MS.gene023626:CDS | 20.0% |
| !!! | TTAATTTTGTTGAAAGTGTA+TGG | + | chr4.4:13168636-13168655 | MS.gene023626:CDS | 20.0% |
| ! | AAATTGATGTTGTTAATCTG+AGG | + | chr4.4:13170259-13170278 | MS.gene023626:CDS | 25.0% |
| ! | ACATTATCAACAAAGTTAAC+TGG | - | chr4.4:13169946-13169965 | None:intergenic | 25.0% |
| ! | ATCAGATCATAAATGTTATC+AGG | - | chr4.4:13167822-13167841 | None:intergenic | 25.0% |
| ! | TAAGAAGATTAATGAGAAAC+TGG | + | chr4.4:13168247-13168266 | MS.gene023626:CDS | 25.0% |
| ! | TCTGATTAAGGATATTATCA+TGG | + | chr4.4:13167836-13167855 | MS.gene023626:CDS | 25.0% |
| ! | TTAATCTTCTTAATGATCTC+TGG | - | chr4.4:13168239-13168258 | None:intergenic | 25.0% |
| ! | TTCAAAATAATACTCTCTTC+AGG | - | chr4.4:13167873-13167892 | None:intergenic | 25.0% |
| ! | TTCAAATTATTATCAGCTTC+AGG | + | chr4.4:13170014-13170033 | MS.gene023626:CDS | 25.0% |
| !! | ACTTTGATAGTAAAGAAGAA+TGG | + | chr4.4:13167735-13167754 | MS.gene023626:CDS | 25.0% |
| !! | TCTTTTTCTTCTTAGCAATA+AGG | - | chr4.4:13168754-13168773 | None:intergenic | 25.0% |
| !! | TGCGAAAAAGAATTTTCTTA+TGG | + | chr4.4:13169810-13169829 | MS.gene023626:CDS | 25.0% |
| !! | TTTTCTTATGGAAGAGATTA+AGG | + | chr4.4:13169822-13169841 | MS.gene023626:CDS | 25.0% |
| AACAATAGATTTGTCTATCC+TGG | - | chr4.4:13168153-13168172 | None:intergenic | 30.0% | |
| AATACTGCAGAGAAAAGTTA+AGG | + | chr4.4:13169906-13169925 | MS.gene023626:CDS | 30.0% | |
| AATGAACTGTTATCAGCAAA+TGG | + | chr4.4:13169128-13169147 | MS.gene023626:CDS | 30.0% | |
| AGGATAGACAAATCTATTGT+TGG | + | chr4.4:13168152-13168171 | MS.gene023626:CDS | 30.0% | |
| AGTATTTGCTCGAGTATAAT+AGG | + | chr4.4:13170151-13170170 | MS.gene023626:CDS | 30.0% | |
| ATACTGCAGAGAAAAGTTAA+GGG | + | chr4.4:13169907-13169926 | MS.gene023626:CDS | 30.0% | |
| ATGGACAGAATTGGAAATTA+TGG | + | chr4.4:13169263-13169282 | MS.gene023626:intron | 30.0% | |
| ATTCGGAAGACCAATAAATT+TGG | - | chr4.4:13168549-13168568 | None:intergenic | 30.0% | |
| ATTGTCAAAAATGCAGTTCT+TGG | - | chr4.4:13169889-13169908 | None:intergenic | 30.0% | |
| CAAAGTTCTTAGAGAAAGTA+AGG | + | chr4.4:13170533-13170552 | MS.gene023626:CDS | 30.0% | |
| CTCAAAAAGATTCTTCTTAC+AGG | + | chr4.4:13169682-13169701 | MS.gene023626:CDS | 30.0% | |
| CTTACTTCAGAGAAAAGTTA+GGG | + | chr4.4:13168595-13168614 | MS.gene023626:CDS | 30.0% | |
| TAAAACAGGAATACCAACAA+TGG | - | chr4.4:13169479-13169498 | None:intergenic | 30.0% | |
| TATGTGGATACTTCATAAGA+TGG | - | chr4.4:13168964-13168983 | None:intergenic | 30.0% | |
| TCTTTACTATCAAAGTCAGT+GGG | - | chr4.4:13167731-13167750 | None:intergenic | 30.0% | |
| TGGACAGAATTGGAAATTAT+GGG | + | chr4.4:13169264-13169283 | MS.gene023626:intron | 30.0% | |
| TTAATCTATCATGCAAGTGT+TGG | + | chr4.4:13169354-13169373 | MS.gene023626:intron | 30.0% | |
| TTACTTCAGAGAAAAGTTAG+GGG | + | chr4.4:13168596-13168615 | MS.gene023626:CDS | 30.0% | |
| TTCTAACTATTATCAGCTTC+AGG | + | chr4.4:13168703-13168722 | MS.gene023626:CDS | 30.0% | |
| TTCTTTACTATCAAAGTCAG+TGG | - | chr4.4:13167732-13167751 | None:intergenic | 30.0% | |
| TTTCCAATAAGCTATCAATC+TGG | - | chr4.4:13169015-13169034 | None:intergenic | 30.0% | |
| ! | ACAGCTTTTATGCATATTCT+TGG | + | chr4.4:13169643-13169662 | MS.gene023626:CDS | 30.0% |
| ! | CAATGCATTTTCTTTTCATC+AGG | - | chr4.4:13168413-13168432 | None:intergenic | 30.0% |
| ! | GATTAACAATGATTTGCAGA+AGG | + | chr4.4:13170407-13170426 | MS.gene023626:CDS | 30.0% |
| ! | TATTGTTGGAATTCCTGTTT+TGG | + | chr4.4:13168166-13168185 | MS.gene023626:CDS | 30.0% |
| ! | TCACAAACTGTTGATAAAAC+TGG | + | chr4.4:13167942-13167961 | MS.gene023626:CDS | 30.0% |
| ! | TGAAAGTGTATGGAATTATC+TGG | + | chr4.4:13168646-13168665 | MS.gene023626:CDS | 30.0% |
| ! | TTAATCTTCTTGATGATCTC+TGG | - | chr4.4:13169550-13169569 | None:intergenic | 30.0% |
| AAGTTCAGTCCAACATGTTA+TGG | + | chr4.4:13170083-13170102 | MS.gene023626:CDS | 35.0% | |
| AATCAGGCTTATGGATTTGA+AGG | + | chr4.4:13168989-13169008 | MS.gene023626:CDS | 35.0% | |
| AGATCAACCATAGTAAGATC+AGG | - | chr4.4:13167765-13167784 | None:intergenic | 35.0% | |
| AGGATTGACAAATCCATTGT+TGG | + | chr4.4:13169463-13169482 | MS.gene023626:CDS | 35.0% | |
| ATGCTATGAAGATGCTAGAT+TGG | + | chr4.4:13169402-13169421 | MS.gene023626:CDS | 35.0% | |
| ATTTGGTAGACCAATCCATT+TGG | - | chr4.4:13169860-13169879 | None:intergenic | 35.0% | |
| CAATCACATCAATTAACCTC+CGG | - | chr4.4:13169046-13169065 | None:intergenic | 35.0% | |
| CATATGTTGAATCAGGCTTA+TGG | + | chr4.4:13168980-13168999 | MS.gene023626:CDS | 35.0% | |
| CCTTACTTCAGAGAAAAGTT+AGG | + | chr4.4:13168594-13168613 | MS.gene023626:CDS | 35.0% | |
| CTTATTGGAAAATTGTGCTC+CGG | + | chr4.4:13169024-13169043 | MS.gene023626:CDS | 35.0% | |
| CTTGAGGAAGCCAAATTTAT+TGG | + | chr4.4:13168536-13168555 | MS.gene023626:CDS | 35.0% | |
| CTTTACTATCAAAGTCAGTG+GGG | - | chr4.4:13167730-13167749 | None:intergenic | 35.0% | |
| GCAACAGAAGATAAATTAGC+AGG | - | chr4.4:13169613-13169632 | None:intergenic | 35.0% | |
| GGACAGAATTGGAAATTATG+GGG | + | chr4.4:13169265-13169284 | MS.gene023626:intron | 35.0% | |
| GTATCCACATATGTTGAATC+AGG | + | chr4.4:13168973-13168992 | MS.gene023626:CDS | 35.0% | |
| GTCTTGGTTATGTTTGTGTA+AGG | + | chr4.4:13168051-13168070 | MS.gene023626:CDS | 35.0% | |
| GTTTGTGTAAGGAATCGAAT+TGG | + | chr4.4:13168062-13168081 | MS.gene023626:CDS | 35.0% | |
| TAAGCCTGATTCAACATATG+TGG | - | chr4.4:13168980-13168999 | None:intergenic | 35.0% | |
| TATGGAAGAGATTAAGGTGT+TGG | + | chr4.4:13169828-13169847 | MS.gene023626:CDS | 35.0% | |
| TCCAATTCTGTCCATAATGT+TGG | - | chr4.4:13169258-13169277 | None:intergenic | 35.0% | |
| TGTGAATGTTGATCTGCAAA+AGG | + | chr4.4:13169097-13169116 | MS.gene023626:intron | 35.0% | |
| TTACTACTTGTGAGTCGATA+AGG | + | chr4.4:13167916-13167935 | MS.gene023626:CDS | 35.0% | |
| TTATACTCCAAAACAAGCTC+TGG | - | chr4.4:13167612-13167631 | None:intergenic | 35.0% | |
| TTATACTCGAGCAAATACTC+AGG | - | chr4.4:13170150-13170169 | None:intergenic | 35.0% | |
| ! | AATGATCTTTTGTCTCCAAG+TGG | + | chr4.4:13170438-13170457 | MS.gene023626:CDS | 35.0% |
| ! | CTCTAAGAACTTTGACACTT+CGG | - | chr4.4:13170527-13170546 | None:intergenic | 35.0% |
| !!! | AAGTCAGGCTTTTGATTTGA+AGG | + | chr4.4:13170299-13170318 | MS.gene023626:CDS | 35.0% |
| !!! | CCTAACTTTTCTCTGAAGTA+AGG | - | chr4.4:13168597-13168616 | None:intergenic | 35.0% |
| !!! | GAGCTTGTTTTGGAGTATAA+TGG | + | chr4.4:13167612-13167631 | MS.gene023626:CDS | 35.0% |
| AAGAGTCTTACGAAGATGCA+AGG | + | chr4.4:13168087-13168106 | MS.gene023626:CDS | 40.0% | |
| AAGGCTGATAAATCTCCTGA+AGG | + | chr4.4:13167990-13168009 | MS.gene023626:CDS | 40.0% | |
| AAGGTCAGAAAAGCAGTTCT+TGG | - | chr4.4:13168578-13168597 | None:intergenic | 40.0% | |
| ACAAGCTTCTGAGCTAAAAC+AGG | - | chr4.4:13169493-13169512 | None:intergenic | 40.0% | |
| ACAGCTGACGATGTTAACAT+TGG | + | chr4.4:13168029-13168048 | MS.gene023626:CDS | 40.0% | |
| AGGAGTCTCCTTCAATATCA+GGG | + | chr4.4:13169174-13169193 | MS.gene023626:CDS | 40.0% | |
| AGTCTCACTCACTTCTTTCT+AGG | + | chr4.4:13169443-13169462 | MS.gene023626:CDS | 40.0% | |
| ATAACTCGTGTTCCTGTTCA+TGG | + | chr4.4:13167792-13167811 | MS.gene023626:CDS | 40.0% | |
| ATAAGGGTTGGAGTCAATTC+TGG | + | chr4.4:13169308-13169327 | MS.gene023626:intron | 40.0% | |
| CAACAGCTTCCATAACATGT+TGG | - | chr4.4:13170095-13170114 | None:intergenic | 40.0% | |
| CAAGCAAGTTTCAACTGATG+AGG | + | chr4.4:13167635-13167654 | MS.gene023626:CDS | 40.0% | |
| CACTAAGGATTTCCTAATGG+AGG | + | chr4.4:13168502-13168521 | MS.gene023626:CDS | 40.0% | |
| CATCTTCATAGCATCTTCAC+AGG | - | chr4.4:13169396-13169415 | None:intergenic | 40.0% | |
| CTCCATTAGGAAATCCTTAG+TGG | - | chr4.4:13168504-13168523 | None:intergenic | 40.0% | |
| CTGTTGCAAGAATTATGGAC+AGG | + | chr4.4:13170559-13170578 | MS.gene023626:CDS | 40.0% | |
| CTTACTATGGTTGATCTTCC+AGG | + | chr4.4:13167768-13167787 | MS.gene023626:CDS | 40.0% | |
| CTTACTGGAAGATTGTTCTG+AGG | + | chr4.4:13170334-13170353 | MS.gene023626:CDS | 40.0% | |
| GAACTGTTATCAGCAAATGG+TGG | + | chr4.4:13169131-13169150 | MS.gene023626:CDS | 40.0% | |
| GAACTTTGATCTCCTCCATT+AGG | - | chr4.4:13168517-13168536 | None:intergenic | 40.0% | |
| GATTTGCAGAAAAGCAGACA+TGG | - | chr4.4:13168330-13168349 | None:intergenic | 40.0% | |
| GCAAGAATTATGGACAGGAT+TGG | + | chr4.4:13170564-13170583 | MS.gene023626:CDS | 40.0% | |
| GCAGTTCTTGGCATGAAATT+CGG | - | chr4.4:13168566-13168585 | None:intergenic | 40.0% | |
| GCAGTTCTTGGCATGAAATT+TGG | - | chr4.4:13168566-13168585 | None:intergenic | 40.0% | |
| GCCAACATTATGGACAGAAT+TGG | + | chr4.4:13169254-13169273 | MS.gene023626:intron | 40.0% | |
| GGAGACTGTTGCAAGAATTA+TGG | + | chr4.4:13170554-13170573 | MS.gene023626:CDS | 40.0% | |
| TAAATCTCCTGAAGGTTTGC+TGG | + | chr4.4:13167998-13168017 | MS.gene023626:CDS | 40.0% | |
| TATACTCCTGCAAGTACTCA+GGG | - | chr4.4:13168838-13168857 | None:intergenic | 40.0% | |
| TCCCTCTTTCCAGAAATAGA+CGG | - | chr4.4:13170495-13170514 | None:intergenic | 40.0% | |
| TGCCACTAAGGATTTCCTAA+TGG | + | chr4.4:13168499-13168518 | MS.gene023626:CDS | 40.0% | |
| TGCTGAAAGTAATGCCACTA+AGG | + | chr4.4:13168487-13168506 | MS.gene023626:CDS | 40.0% | |
| TGGAGTTCCTGATCTTACTA+TGG | + | chr4.4:13167755-13167774 | MS.gene023626:CDS | 40.0% | |
| TGTCTCTTCCCTGATATTGA+AGG | - | chr4.4:13169185-13169204 | None:intergenic | 40.0% | |
| TGTTATGGAAGCTGTTGAGA+TGG | + | chr4.4:13170098-13170117 | MS.gene023626:CDS | 40.0% | |
| TTATACTCCTGCAAGTACTC+AGG | - | chr4.4:13168839-13168858 | None:intergenic | 40.0% | |
| ! | ACAAGCTTTTGAGCCAAAAC+AGG | - | chr4.4:13168182-13168201 | None:intergenic | 40.0% |
| ! | AGGCCAGATTGATAGCTTAT+TGG | + | chr4.4:13169009-13169028 | MS.gene023626:CDS | 40.0% |
| ! | GACGATGTTAACATTGGTCT+TGG | + | chr4.4:13168035-13168054 | MS.gene023626:CDS | 40.0% |
| ! | TCAAGTACTGTGAAGCTGAA+AGG | + | chr4.4:13168917-13168936 | MS.gene023626:CDS | 40.0% |
| ! | TTTAGCTCAGAAGCTTGTTC+AGG | + | chr4.4:13169495-13169514 | MS.gene023626:CDS | 40.0% |
| !! | AGAGATTAAGGTGTTGGAAG+AGG | + | chr4.4:13169834-13169853 | MS.gene023626:CDS | 40.0% |
| !! | GCAAGTGTTGGTATCATTGT+TGG | + | chr4.4:13169366-13169385 | MS.gene023626:intron | 40.0% |
| !! | TCCGTCTATTTCTGGAAAGA+GGG | + | chr4.4:13170491-13170510 | MS.gene023626:CDS | 40.0% |
| !! | TTATCAGGTTGACCATGAAC+AGG | - | chr4.4:13167807-13167826 | None:intergenic | 40.0% |
| !!! | AGGCTTTTGATTTGAAGGCT+AGG | + | chr4.4:13170304-13170323 | MS.gene023626:CDS | 40.0% |
| AAAGCCTGACTTAGCACATG+AGG | - | chr4.4:13170291-13170310 | None:intergenic | 45.0% | |
| AAGCCTGACTTAGCACATGA+GGG | - | chr4.4:13170290-13170309 | None:intergenic | 45.0% | |
| AATGCATGTGCTTGTCCTCA+GGG | - | chr4.4:13169723-13169742 | None:intergenic | 45.0% | |
| AATGCATTGCACAGCTCGAT+TGG | + | chr4.4:13168424-13168443 | MS.gene023626:CDS | 45.0% | |
| ACAGGAACACGAGTTATACC+TGG | - | chr4.4:13167789-13167808 | None:intergenic | 45.0% | |
| ACTAGCAGCAGTGCTTGATA+AGG | + | chr4.4:13169291-13169310 | MS.gene023626:intron | 45.0% | |
| AGCTTGAAGCACATGCTGAA+TGG | - | chr4.4:13168780-13168799 | None:intergenic | 45.0% | |
| AGGCTAGGATGATTGCTTAC+TGG | + | chr4.4:13170319-13170338 | MS.gene023626:CDS | 45.0% | |
| ATGTAACCCTGAGTACTTGC+AGG | + | chr4.4:13168829-13168848 | MS.gene023626:CDS | 45.0% | |
| ATTGGAAAATTGTGCTCCGG+AGG | + | chr4.4:13169027-13169046 | MS.gene023626:CDS | 45.0% | |
| CCAACACATGTGAAGCTTGA+AGG | + | chr4.4:13170228-13170247 | MS.gene023626:CDS | 45.0% | |
| CCTTCAAGCTTCACATGTGT+TGG | - | chr4.4:13170231-13170250 | None:intergenic | 45.0% | |
| CTAGCAGCAGTGCTTGATAA+GGG | + | chr4.4:13169292-13169311 | MS.gene023626:intron | 45.0% | |
| CTGTTATCAGCAAATGGTGG+TGG | + | chr4.4:13169134-13169153 | MS.gene023626:CDS | 45.0% | |
| GAAAGAAAGCAAAGAGACCG+TGG | + | chr4.4:13169232-13169251 | MS.gene023626:intron | 45.0% | |
| GAAGAGTCTCCGTCTATTTC+TGG | + | chr4.4:13170483-13170502 | MS.gene023626:CDS | 45.0% | |
| GAGGAGTCTCCTTCAATATC+AGG | + | chr4.4:13169173-13169192 | MS.gene023626:CDS | 45.0% | |
| GCCAGTGAGGATAAATTAGC+AGG | - | chr4.4:13168302-13168321 | None:intergenic | 45.0% | |
| GCCTGCTAATTTATCCTCAC+TGG | + | chr4.4:13168298-13168317 | MS.gene023626:CDS | 45.0% | |
| GGAGGAGATCAAAGTTCTTG+AGG | + | chr4.4:13168520-13168539 | MS.gene023626:CDS | 45.0% | |
| TATCAAAGTCAGTGGGGTGT+TGG | - | chr4.4:13167724-13167743 | None:intergenic | 45.0% | |
| TCTGTCCATAATGTTGGCCA+CGG | - | chr4.4:13169252-13169271 | None:intergenic | 45.0% | |
| TGCTATAAACACAGCCACTG+AGG | + | chr4.4:13167671-13167690 | MS.gene023626:CDS | 45.0% | |
| TGTGCTTCAAGCTGTTGAGA+TGG | + | chr4.4:13168787-13168806 | MS.gene023626:CDS | 45.0% | |
| TTACCCTCATGTGCTAAGTC+AGG | + | chr4.4:13170284-13170303 | MS.gene023626:CDS | 45.0% | |
| TTGGAAGAGGCCAAATGGAT+TGG | + | chr4.4:13169847-13169866 | MS.gene023626:CDS | 45.0% | |
| ! | ACTGTGAAGCTGAAAGGTGT+TGG | + | chr4.4:13168923-13168942 | MS.gene023626:CDS | 45.0% |
| ! | CATGTGAAGCTTGAAGGTGT+TGG | + | chr4.4:13170234-13170253 | MS.gene023626:CDS | 45.0% |
| ! | GATCTTTTGTCTCCAAGTGG+TGG | + | chr4.4:13170441-13170460 | MS.gene023626:CDS | 45.0% |
| ! | GCAGGAGTATAACAAGCTGA+TGG | + | chr4.4:13168847-13168866 | MS.gene023626:CDS | 45.0% |
| ! | TTTTGTCTCCAAGTGGTGGT+GGG | + | chr4.4:13170445-13170464 | MS.gene023626:CDS | 45.0% |
| !! | ACTGGAAGATTGTTCTGAGG+AGG | + | chr4.4:13170337-13170356 | MS.gene023626:CDS | 45.0% |
| !! | CTCCGTCTATTTCTGGAAAG+AGG | + | chr4.4:13170490-13170509 | MS.gene023626:CDS | 45.0% |
| !! | TGATTTCGAAGAGTACCCTG+AGG | + | chr4.4:13169705-13169724 | MS.gene023626:CDS | 45.0% |
| ACCTTCTCCAGCAAACCTTC+AGG | - | chr4.4:13168008-13168027 | None:intergenic | 50.0% | |
| AGAGACCGTGGCCAACATTA+TGG | + | chr4.4:13169244-13169263 | MS.gene023626:intron | 50.0% | |
| AGTGTCACACACTTCTGTCC+AGG | + | chr4.4:13168132-13168151 | MS.gene023626:CDS | 50.0% | |
| CAATGCATGTGCTTGTCCTC+AGG | - | chr4.4:13169724-13169743 | None:intergenic | 50.0% | |
| CAGCAGTGCTTGATAAGGGT+TGG | + | chr4.4:13169296-13169315 | MS.gene023626:intron | 50.0% | |
| GGAAGAGACAGAAGTTGAGC+AGG | + | chr4.4:13169195-13169214 | MS.gene023626:intron | 50.0% | |
| ! | CTTTTGTCTCCAAGTGGTGG+TGG | + | chr4.4:13170444-13170463 | MS.gene023626:CDS | 50.0% |
| ! | GGCTACTAGTTTGCATGAGC+TGG | + | chr4.4:13168268-13168287 | MS.gene023626:CDS | 50.0% |
| ! | TCCAAAACAAGCTCTGGCTG+TGG | - | chr4.4:13167606-13167625 | None:intergenic | 50.0% |
| !! | AACGCTTGCTGTCGTGACAA+AGG | + | chr4.4:13167971-13167990 | MS.gene023626:CDS | 50.0% |
| !! | AGGTGTTGGAAGAGGCCAAA+TGG | + | chr4.4:13169842-13169861 | MS.gene023626:CDS | 50.0% |
| !! | CAAATGGTGGTGGTGTTGAG+AGG | + | chr4.4:13169144-13169163 | MS.gene023626:CDS | 50.0% |
| !! | TCCACAGCCAGAGCTTGTTT+TGG | + | chr4.4:13167602-13167621 | MS.gene023626:CDS | 50.0% |
| !! | TCCTGAAGGTTTGCTGGAGA+AGG | + | chr4.4:13168004-13168023 | MS.gene023626:CDS | 50.0% |
| !! | TGGGGTGTTGGAAATCCCTT+TGG | - | chr4.4:13167712-13167731 | None:intergenic | 50.0% |
| AGACATGGCATCAGCCAGTG+AGG | - | chr4.4:13168315-13168334 | None:intergenic | 55.0% | |
| CTCTCAATCCCACCACCACT+TGG | - | chr4.4:13170456-13170475 | None:intergenic | 55.0% | |
| ! | CAAGCTCTGGCTGTGGAAGT+TGG | - | chr4.4:13167599-13167618 | None:intergenic | 55.0% |
| ! | TGGTGTTGAGAGGCTGCTTG+AGG | + | chr4.4:13169154-13169173 | MS.gene023626:CDS | 55.0% |
| !! | AGCTTGCTGGCACTGCCAAA+GGG | + | chr4.4:13167694-13167713 | MS.gene023626:CDS | 55.0% |
| !! | CAAGTGGTGGTGGGATTGAG+AGG | + | chr4.4:13170454-13170473 | MS.gene023626:CDS | 55.0% |
| ACAGCCACTGAGGAGCTTGC+TGG | + | chr4.4:13167681-13167700 | MS.gene023626:CDS | 60.0% | |
| AGTGCCAGCAAGCTCCTCAG+TGG | - | chr4.4:13167688-13167707 | None:intergenic | 60.0% | |
| CAGGTTTCCACTCGCAGAGC+AGG | + | chr4.4:13170033-13170052 | MS.gene023626:CDS | 60.0% | |
| GCTCTGGCTGTGGAAGTTGG+TGG | - | chr4.4:13167596-13167615 | None:intergenic | 60.0% | |
| TTTCTCGCCTGCTCTGCGAG+TGG | - | chr4.4:13170043-13170062 | None:intergenic | 60.0% | |
| !! | GAGCTTGCTGGCACTGCCAA+AGG | + | chr4.4:13167693-13167712 | MS.gene023626:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 13167579 | 13170599 | 13167579 | ID=MS.gene023626 |
| chr4.4 | mRNA | 13167579 | 13170599 | 13167579 | ID=MS.gene023626.t1;Parent=MS.gene023626 |
| chr4.4 | exon | 13167579 | 13169048 | 13167579 | ID=MS.gene023626.t1.exon1;Parent=MS.gene023626.t1 |
| chr4.4 | CDS | 13167579 | 13169048 | 13167579 | ID=cds.MS.gene023626.t1;Parent=MS.gene023626.t1 |
| chr4.4 | exon | 13169119 | 13169207 | 13169119 | ID=MS.gene023626.t1.exon2;Parent=MS.gene023626.t1 |
| chr4.4 | CDS | 13169119 | 13169207 | 13169119 | ID=cds.MS.gene023626.t1;Parent=MS.gene023626.t1 |
| chr4.4 | exon | 13169402 | 13170599 | 13169402 | ID=MS.gene023626.t1.exon3;Parent=MS.gene023626.t1 |
| chr4.4 | CDS | 13169402 | 13170599 | 13169402 | ID=cds.MS.gene023626.t1;Parent=MS.gene023626.t1 |
| Gene Sequence |
| Protein sequence |
