Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025148.t1 | XP_003595243.1 | 97.9 | 432 | 9 | 0 | 1 | 432 | 100 | 531 | 3.90E-247 | 863.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025148.t1 | Q38932 | 77.5 | 432 | 91 | 1 | 1 | 432 | 99 | 524 | 4.9e-198 | 691.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025148.t1 | G7IQ81 | 97.9 | 432 | 9 | 0 | 1 | 432 | 100 | 531 | 2.8e-247 | 863.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene024007 | MS.gene025148 | PPI |
| MS.gene025148 | MS.gene51193 | PPI |
| MS.gene025148 | MS.gene033439 | PPI |
| MS.gene058700 | MS.gene025148 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025148.t1 | MTR_2g040060 | 97.917 | 432 | 9 | 0 | 1 | 432 | 100 | 531 | 0.0 | 888 |
| MS.gene025148.t1 | MTR_7g090150 | 39.599 | 399 | 226 | 8 | 20 | 413 | 91 | 479 | 6.91e-93 | 289 |
| MS.gene025148.t1 | MTR_2g086700 | 39.173 | 411 | 233 | 8 | 11 | 413 | 81 | 482 | 6.67e-90 | 281 |
| MS.gene025148.t1 | MTR_2g086730 | 38.235 | 408 | 235 | 9 | 11 | 414 | 77 | 471 | 4.64e-86 | 271 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025148.t1 | AT5G57030 | 77.546 | 432 | 91 | 1 | 1 | 432 | 99 | 524 | 0.0 | 712 |
| MS.gene025148.t1 | AT3G10230 | 38.293 | 410 | 238 | 7 | 10 | 413 | 82 | 482 | 2.61e-91 | 285 |
| MS.gene025148.t1 | AT3G10230 | 36.490 | 359 | 215 | 6 | 59 | 413 | 1 | 350 | 1.66e-74 | 238 |
Find 0 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTATCAATATATACAA+CGG | - | 14484:1444-1463 | MS.gene025148:intergenic | 10.0% |
| !!! | TTTTTCTTTAATAAATCAAA+AGG | - | 14484:2640-2659 | MS.gene025148:intergenic | 10.0% |
| !!! | TTTTTGTTTGTTATAATTTT+AGG | + | 14484:2358-2377 | MS.gene025148:intron | 10.0% |
| !! | AAAAAAATTAAGCAATAAGA+TGG | - | 14484:4522-4541 | MS.gene025148:intergenic | 15.0% |
| !! | AGAAGTTTCAATATATAATA+AGG | - | 14484:1860-1879 | MS.gene025148:intergenic | 15.0% |
| !! | ATGAATTACAAATCTATAAA+AGG | - | 14484:1611-1630 | MS.gene025148:intergenic | 15.0% |
| !! | ATTAAATGTATAAAATGTGA+TGG | + | 14484:2310-2329 | MS.gene025148:intron | 15.0% |
| !! | GAAGTTTCAATATATAATAA+GGG | - | 14484:1859-1878 | MS.gene025148:intergenic | 15.0% |
| !!! | TTAATTTTTTTCACACTTTT+GGG | + | 14484:4531-4550 | MS.gene025148:intron | 15.0% |
| !! | ATGGTTCTTTCTAAATTATA+TGG | + | 14484:2840-2859 | MS.gene025148:intron | 20.0% |
| !! | GTGAAAAATCTAATATGAAT+GGG | + | 14484:4285-4304 | MS.gene025148:intron | 20.0% |
| !! | TGGTTCTTTCTAAATTATAT+GGG | + | 14484:2841-2860 | MS.gene025148:intron | 20.0% |
| !! | TGTGAAAAATCTAATATGAA+TGG | + | 14484:4284-4303 | MS.gene025148:intron | 20.0% |
| !! | TTATCAAGATTAAATACGAT+GGG | + | 14484:2664-2683 | MS.gene025148:CDS | 20.0% |
| !!! | AAAATGTTTTCAAAAAGTGT+GGG | + | 14484:2167-2186 | MS.gene025148:intron | 20.0% |
| !!! | AATTCATATTAATTTTCCCT+AGG | + | 14484:1624-1643 | MS.gene025148:intron | 20.0% |
| !!! | CATATATGTCATAGATATTT+TGG | + | 14484:3985-4004 | MS.gene025148:intron | 20.0% |
| !!! | CTTAATTTTTTTCACACTTT+TGG | + | 14484:4530-4549 | MS.gene025148:intron | 20.0% |
| !!! | GAAAATATATACTGTTTTCA+AGG | - | 14484:1303-1322 | MS.gene025148:intergenic | 20.0% |
| !!! | GTTATGGTTTTTAGTAAAAA+GGG | - | 14484:4410-4429 | MS.gene025148:intergenic | 20.0% |
| !!! | TGTTATGGTTTTTAGTAAAA+AGG | - | 14484:4411-4430 | MS.gene025148:intergenic | 20.0% |
| !!! | TTATTTCTGAATTAACTTCT+TGG | + | 14484:1568-1587 | MS.gene025148:intron | 20.0% |
| ! | AAAAACTTATGAAGAGGTAA+GGG | + | 14484:2699-2718 | MS.gene025148:intron | 25.0% |
| ! | AAATTATAATGAAGTGCACT+TGG | - | 14484:1376-1395 | MS.gene025148:intergenic | 25.0% |
| ! | AATAAAAATCCCATTTCCAT+TGG | + | 14484:1458-1477 | MS.gene025148:CDS | 25.0% |
| ! | AATACCAATTCTATGTTCTT+TGG | + | 14484:4125-4144 | MS.gene025148:intron | 25.0% |
| ! | AATATATAATAAGGGCAACA+TGG | - | 14484:1851-1870 | MS.gene025148:intergenic | 25.0% |
| ! | ACTATTATGTAACAGCTAAA+AGG | - | 14484:3164-3183 | MS.gene025148:intergenic | 25.0% |
| ! | AGAGACATTCTTAAGTTATT+TGG | - | 14484:4685-4704 | MS.gene025148:intergenic | 25.0% |
| ! | AGTTAATCATCATTCCATTA+TGG | - | 14484:4569-4588 | MS.gene025148:intergenic | 25.0% |
| ! | AGTTACAAAAACTTATGAAG+AGG | + | 14484:2693-2712 | MS.gene025148:CDS | 25.0% |
| ! | ATGTTATGTTGTTAAAGACA+AGG | - | 14484:2266-2285 | MS.gene025148:intergenic | 25.0% |
| ! | ATTAGAAAGATATAGCAAGA+AGG | - | 14484:1032-1051 | MS.gene025148:intergenic | 25.0% |
| ! | ATTCTATGTTCTTTGGATAA+TGG | + | 14484:4132-4151 | MS.gene025148:intron | 25.0% |
| ! | CTTATCAAGATTAAATACGA+TGG | + | 14484:2663-2682 | MS.gene025148:CDS | 25.0% |
| ! | CTTTAATAAATCAAAAGGCA+TGG | - | 14484:2635-2654 | MS.gene025148:intergenic | 25.0% |
| ! | GTCATTTAACAATACATATG+CGG | - | 14484:2944-2963 | MS.gene025148:intergenic | 25.0% |
| ! | TATAAAAACACGATAGTACA+AGG | + | 14484:4238-4257 | MS.gene025148:intron | 25.0% |
| ! | TATCAAGATTAAATACGATG+GGG | + | 14484:2665-2684 | MS.gene025148:CDS | 25.0% |
| ! | TATTACTTATGGAAGAAGTA+AGG | + | 14484:3550-3569 | MS.gene025148:CDS | 25.0% |
| ! | TCCATTAAATGAAATCTGTT+AGG | - | 14484:1204-1223 | MS.gene025148:intergenic | 25.0% |
| ! | TCTATGGTTCATAAAAAGAA+GGG | - | 14484:1132-1151 | MS.gene025148:intergenic | 25.0% |
| ! | TGTATTGTTAAATGACCAAT+CGG | + | 14484:2948-2967 | MS.gene025148:intron | 25.0% |
| ! | TTAGCTGTTACATAATAGTT+GGG | + | 14484:3165-3184 | MS.gene025148:intron | 25.0% |
| ! | TTATCCAAAGAACATAGAAT+TGG | - | 14484:4132-4151 | MS.gene025148:intergenic | 25.0% |
| ! | TTCTATGGTTCATAAAAAGA+AGG | - | 14484:1133-1152 | MS.gene025148:intergenic | 25.0% |
| ! | TTTAGCTGTTACATAATAGT+TGG | + | 14484:3164-3183 | MS.gene025148:intron | 25.0% |
| !! | AACAGTATATATTTTCTTGC+TGG | + | 14484:1307-1326 | MS.gene025148:intron | 25.0% |
| !! | AAGCATAGTTTTCGTAATTT+TGG | - | 14484:3650-3669 | MS.gene025148:intergenic | 25.0% |
| !! | ACAGTATATATTTTCTTGCT+GGG | + | 14484:1308-1327 | MS.gene025148:intron | 25.0% |
| !! | ATTGCTACAATTTTGAATGA+CGG | + | 14484:3512-3531 | MS.gene025148:CDS | 25.0% |
| !! | GAAAATGTTTTCAAAAAGTG+TGG | + | 14484:2166-2185 | MS.gene025148:intron | 25.0% |
| !! | TTCATTATAATTTCAGGTCT+TGG | + | 14484:1383-1402 | MS.gene025148:intron | 25.0% |
| !! | TTTTCTCTACAAATTTGTGT+AGG | + | 14484:3264-3283 | MS.gene025148:intron | 25.0% |
| !!! | TACTGTTTTTATTAGACTGT+TGG | + | 14484:2021-2040 | MS.gene025148:intron | 25.0% |
| AAAAGTAGAAAGGATTGTTG+AGG | + | 14484:1679-1698 | MS.gene025148:CDS | 30.0% | |
| AAAATGTCAGCTCTCAAATT+TGG | - | 14484:3750-3769 | MS.gene025148:intergenic | 30.0% | |
| AACAGAACTGCATTACTTAA+TGG | - | 14484:2559-2578 | MS.gene025148:intergenic | 30.0% | |
| AACTTCTGACCTGTTATTAT+AGG | + | 14484:1873-1892 | MS.gene025148:intron | 30.0% | |
| AAGATATGTACTAGTACGAT+AGG | - | 14484:2975-2994 | MS.gene025148:intergenic | 30.0% | |
| ACATATTTAGCATCTGATGT+TGG | + | 14484:3230-3249 | MS.gene025148:intron | 30.0% | |
| AGAATTGGTATTATGAACTG+TGG | - | 14484:4117-4136 | MS.gene025148:intergenic | 30.0% | |
| AGATAGAAGATAGAATGTAG+AGG | - | 14484:4057-4076 | MS.gene025148:intergenic | 30.0% | |
| AGTATAATACATGCTTTCAG+CGG | - | 14484:3071-3090 | MS.gene025148:intergenic | 30.0% | |
| CAAAAACTTATGAAGAGGTA+AGG | + | 14484:2698-2717 | MS.gene025148:intron | 30.0% | |
| CAAGGACATAAATATCAAAC+TGG | - | 14484:1285-1304 | MS.gene025148:intergenic | 30.0% | |
| CATAAAGGTTAGTAGTATTC+AGG | + | 14484:4442-4461 | MS.gene025148:intron | 30.0% | |
| CTACATTCTATCTTCTATCT+TGG | + | 14484:4057-4076 | MS.gene025148:intron | 30.0% | |
| GCCTAACAGATTTCATTTAA+TGG | + | 14484:1200-1219 | MS.gene025148:intron | 30.0% | |
| GGATTAAAAGTTGGACTTAT+TGG | + | 14484:949-968 | MS.gene025148:CDS | 30.0% | |
| GTATCATCCTATATGGAAAA+TGG | - | 14484:2915-2934 | MS.gene025148:intergenic | 30.0% | |
| GTGCACTTCATTATAATTTC+AGG | + | 14484:1377-1396 | MS.gene025148:intron | 30.0% | |
| TATATCACAAGAAAGCAAAC+TGG | - | 14484:4490-4509 | MS.gene025148:intergenic | 30.0% | |
| TATGTTGTTAAAGACAAGGA+AGG | - | 14484:2262-2281 | MS.gene025148:intergenic | 30.0% | |
| TCTACAAATTTGTGTAGGAA+TGG | + | 14484:3269-3288 | MS.gene025148:intron | 30.0% | |
| ! | ACAATCCAATCATATTTTGC+AGG | - | 14484:2074-2093 | MS.gene025148:intergenic | 30.0% |
| ! | CAGAGATCTTTCTTTCTTTT+TGG | + | 14484:3869-3888 | MS.gene025148:CDS | 30.0% |
| ! | CATAGTTTTCGTAATTTTGG+AGG | - | 14484:3647-3666 | MS.gene025148:intergenic | 30.0% |
| ! | GCTATCAGTATTACATTTTG+AGG | + | 14484:2732-2751 | MS.gene025148:intron | 30.0% |
| ! | TAATATCGTTTTCGTCCAAT+AGG | + | 14484:3440-3459 | MS.gene025148:intron | 30.0% |
| !! | ACATTTTCTGATATTTGCTG+CGG | + | 14484:3009-3028 | MS.gene025148:intron | 30.0% |
| !! | ATTTTCTTTTTCGTTCAGCT+TGG | + | 14484:3816-3835 | MS.gene025148:intron | 30.0% |
| !! | GATTAACTGATTTTTATCGC+AGG | + | 14484:4581-4600 | MS.gene025148:intron | 30.0% |
| AAAAGGACAATTGGAAATCG+AGG | - | 14484:3147-3166 | MS.gene025148:intergenic | 35.0% | |
| AAAAGTTGGACTTATTGGTC+CGG | + | 14484:954-973 | MS.gene025148:CDS | 35.0% | |
| AAACAATAGAAGATCTCTCG+AGG | - | 14484:4638-4657 | MS.gene025148:intergenic | 35.0% | |
| AAACTATTGCAGTATGAGGT+TGG | + | 14484:1929-1948 | MS.gene025148:CDS | 35.0% | |
| AAAGGACAATTGGAAATCGA+GGG | - | 14484:3146-3165 | MS.gene025148:intergenic | 35.0% | |
| AACAATACCTCGTGACATAA+AGG | + | 14484:4427-4446 | MS.gene025148:intron | 35.0% | |
| AACTATTGCAGTATGAGGTT+GGG | + | 14484:1930-1949 | MS.gene025148:CDS | 35.0% | |
| AACTCAAAGAACAGCTTGAA+TGG | - | 14484:4318-4337 | MS.gene025148:intergenic | 35.0% | |
| AAGAACAGCTTGAATGGTAA+TGG | - | 14484:4312-4331 | MS.gene025148:intergenic | 35.0% | |
| AAGGTTGTATTGAGCATGTT+TGG | + | 14484:1411-1430 | MS.gene025148:CDS | 35.0% | |
| ACACCATAGTTGTTTGTGAA+AGG | - | 14484:985-1004 | MS.gene025148:intergenic | 35.0% | |
| ACTGCAATACACTTTCTAAC+AGG | + | 14484:2758-2777 | MS.gene025148:intron | 35.0% | |
| AGGGCAAAACTGAAATCATA+AGG | - | 14484:1113-1132 | MS.gene025148:intergenic | 35.0% | |
| AGTAGCAAGCCTATAATAAC+AGG | - | 14484:1885-1904 | MS.gene025148:intergenic | 35.0% | |
| ATAAGAACGTCCAATGGAAA+TGG | - | 14484:1471-1490 | MS.gene025148:intergenic | 35.0% | |
| ATAATGAAGTGCACTTGGTA+AGG | - | 14484:1371-1390 | MS.gene025148:intergenic | 35.0% | |
| ATCTTGGCTCAAAAGTAGAA+AGG | + | 14484:1669-1688 | MS.gene025148:CDS | 35.0% | |
| ATTAAATCTCTCCTATCCCT+AGG | - | 14484:4354-4373 | MS.gene025148:intergenic | 35.0% | |
| ATTTCCATTGGACGTTCTTA+TGG | + | 14484:1470-1489 | MS.gene025148:CDS | 35.0% | |
| CACCATAGTTGTTTGTGAAA+GGG | - | 14484:984-1003 | MS.gene025148:intergenic | 35.0% | |
| CACTAAACTAAAATCCCCTT+TGG | + | 14484:4173-4192 | MS.gene025148:intron | 35.0% | |
| CATGGATAGACCAATACTTA+GGG | - | 14484:2236-2255 | MS.gene025148:intergenic | 35.0% | |
| GCAAGGGACATTATTACTTA+TGG | + | 14484:3539-3558 | MS.gene025148:CDS | 35.0% | |
| GCAATTACTGAAGCATATTG+CGG | - | 14484:3497-3516 | MS.gene025148:intergenic | 35.0% | |
| GCACTAAGTATCATCCTATA+TGG | - | 14484:2922-2941 | MS.gene025148:intergenic | 35.0% | |
| GGATTGAAATTGCTCCATAA+TGG | + | 14484:4552-4571 | MS.gene025148:intron | 35.0% | |
| GGCAAGTTAGGATTAAAAGT+TGG | + | 14484:940-959 | MS.gene025148:CDS | 35.0% | |
| GGCATTGCATAAAGAAATGT+TGG | - | 14484:2476-2495 | MS.gene025148:intergenic | 35.0% | |
| GGGCAAAACTGAAATCATAA+GGG | - | 14484:1112-1131 | MS.gene025148:intergenic | 35.0% | |
| GTAACAGCTAAAAGGACAAT+TGG | - | 14484:3156-3175 | MS.gene025148:intergenic | 35.0% | |
| GTACTAGATCTAGTCGTTAT+TGG | + | 14484:880-899 | MS.gene025148:CDS | 35.0% | |
| TAAGAACGTCCAATGGAAAT+GGG | - | 14484:1470-1489 | MS.gene025148:intergenic | 35.0% | |
| TATAGAGAAATTCCAATCGC+AGG | + | 14484:2585-2604 | MS.gene025148:intron | 35.0% | |
| TCAGACTTCTCATTGATGTA+AGG | + | 14484:3769-3788 | MS.gene025148:intron | 35.0% | |
| TGCAATTTACCCGACTTATA+AGG | - | 14484:2198-2217 | MS.gene025148:intergenic | 35.0% | |
| TTAAATCTCTCCTATCCCTA+GGG | - | 14484:4353-4372 | MS.gene025148:intergenic | 35.0% | |
| TTATACTGGAGAACATTGAC+AGG | + | 14484:3084-3103 | MS.gene025148:intron | 35.0% | |
| TTCACGAGGAATTGTTAAGA+AGG | + | 14484:1513-1532 | MS.gene025148:CDS | 35.0% | |
| TTGTATTGAGCATGTTTGGA+AGG | + | 14484:1415-1434 | MS.gene025148:CDS | 35.0% | |
| TTTATCATAGTTGACCCTGT+AGG | - | 14484:4730-4749 | MS.gene025148:intergenic | 35.0% | |
| TTTGAATGACGGTAATGCAA+GGG | + | 14484:3523-3542 | MS.gene025148:CDS | 35.0% | |
| ! | AACACTTTTGTACGAGACAT+GGG | - | 14484:2497-2516 | MS.gene025148:intergenic | 35.0% |
| ! | CCATTCAATTTTCAGCCAAT+AGG | - | 14484:2804-2823 | MS.gene025148:intergenic | 35.0% |
| ! | CCTATTGGCTGAAAATTGAA+TGG | + | 14484:2801-2820 | MS.gene025148:intron | 35.0% |
| ! | GATGCATCCATTTTCCATAT+AGG | + | 14484:2905-2924 | MS.gene025148:intron | 35.0% |
| ! | GCTGAAAGCATGTATTATAC+TGG | + | 14484:3070-3089 | MS.gene025148:intron | 35.0% |
| ! | TTTTGAATGACGGTAATGCA+AGG | + | 14484:3522-3541 | MS.gene025148:CDS | 35.0% |
| !! | AGTTTTAATGAAAGCTCCCT+AGG | + | 14484:4334-4353 | MS.gene025148:intron | 35.0% |
| !! | CTCTAAGATCACTGTTTCTA+TGG | - | 14484:1148-1167 | MS.gene025148:intergenic | 35.0% |
| !! | GTTTTAATGAAAGCTCCCTA+GGG | + | 14484:4335-4354 | MS.gene025148:intron | 35.0% |
| !! | TATGTCACGAGGTATTGTTA+TGG | - | 14484:4426-4445 | MS.gene025148:intergenic | 35.0% |
| !! | TCGTACAAAAGTGTTCTTTG+AGG | + | 14484:2502-2521 | MS.gene025148:CDS | 35.0% |
| !! | TTTCGTAATTTTGGAGGAAC+TGG | - | 14484:3641-3660 | MS.gene025148:intergenic | 35.0% |
| AAAAACAGTGCTTCCCTTGA+TGG | + | 14484:3110-3129 | MS.gene025148:intron | 40.0% | |
| AAAATCCCCTTTGGTATGCA+TGG | + | 14484:4182-4201 | MS.gene025148:intron | 40.0% | |
| AACTTCCCTAAACCTTGCTA+TGG | + | 14484:1809-1828 | MS.gene025148:intron | 40.0% | |
| AAGAACCATTTCCAAAGTCC+CGG | - | 14484:2829-2848 | MS.gene025148:intergenic | 40.0% | |
| AAGGGAGTTGTAGCATGTAA+AGG | - | 14484:4392-4411 | MS.gene025148:intergenic | 40.0% | |
| ACCATCACGTTTGGATCATA+AGG | - | 14484:2395-2414 | MS.gene025148:intergenic | 40.0% | |
| ACTATTGCAGTATGAGGTTG+GGG | + | 14484:1931-1950 | MS.gene025148:CDS | 40.0% | |
| ACTCCATCTCCAATAGAGAT+AGG | - | 14484:862-881 | MS.gene025148:intergenic | 40.0% | |
| ACTTGATTACCTCGCATTGA+TGG | - | 14484:3581-3600 | MS.gene025148:intergenic | 40.0% | |
| AGCTTATGGTGTAGAAGTTG+AGG | + | 14484:1976-1995 | MS.gene025148:CDS | 40.0% | |
| AGGGAAACTATTGCAGTATG+AGG | + | 14484:1925-1944 | MS.gene025148:CDS | 40.0% | |
| AGGTTCTTCTGTTCTGTGTT+TGG | - | 14484:3322-3341 | MS.gene025148:intergenic | 40.0% | |
| ATACACTTTGGCCACAAGAA+AGG | + | 14484:3840-3859 | MS.gene025148:CDS | 40.0% | |
| ATCCTACCATGCATACCAAA+GGG | - | 14484:4191-4210 | MS.gene025148:intergenic | 40.0% | |
| ATCTGCTTTCAGATCCTACA+GGG | + | 14484:4713-4732 | MS.gene025148:CDS | 40.0% | |
| ATCTTCTATCTTGGCTTCAG+TGG | + | 14484:4066-4085 | MS.gene025148:intron | 40.0% | |
| ATGGTGTAGAAGTTGAGGTA+GGG | + | 14484:1981-2000 | MS.gene025148:intron | 40.0% | |
| ATTAGCACTAATTGTGCAGC+TGG | + | 14484:3892-3911 | MS.gene025148:CDS | 40.0% | |
| CACAAACAACTATGGTGTGT+GGG | + | 14484:987-1006 | MS.gene025148:CDS | 40.0% | |
| CAGGTAAGCAGAAGAAAGTA+CGG | - | 14484:3943-3962 | MS.gene025148:intergenic | 40.0% | |
| CCAGATAGTAGAACTGTTTG+AGG | - | 14484:3685-3704 | MS.gene025148:intergenic | 40.0% | |
| CCTCAAACAGTTCTACTATC+TGG | + | 14484:3682-3701 | MS.gene025148:intron | 40.0% | |
| CCTGTCCTGCAAAATATGAT+TGG | + | 14484:2066-2085 | MS.gene025148:intron | 40.0% | |
| CTACTAACCTTTATGTCACG+AGG | - | 14484:4437-4456 | MS.gene025148:intergenic | 40.0% | |
| CTCAACATACTCTCTCCTAT+TGG | + | 14484:2786-2805 | MS.gene025148:intron | 40.0% | |
| CTCCCTTTCACAAACAACTA+TGG | + | 14484:979-998 | MS.gene025148:CDS | 40.0% | |
| CTTCTGTTCTGTGTTTGGTA+AGG | - | 14484:3317-3336 | MS.gene025148:intergenic | 40.0% | |
| GAAAATAGACCATACCACTC+AGG | - | 14484:3962-3981 | MS.gene025148:intergenic | 40.0% | |
| GAACAGAAGAACCTTGCATT+TGG | + | 14484:3328-3347 | MS.gene025148:CDS | 40.0% | |
| GCATGGATAGACCAATACTT+AGG | - | 14484:2237-2256 | MS.gene025148:intergenic | 40.0% | |
| GCTGAAAATTGAATGGTTCC+GGG | + | 14484:2808-2827 | MS.gene025148:intron | 40.0% | |
| GGAGGAACTGGTAACATTTA+GGG | - | 14484:3629-3648 | MS.gene025148:intergenic | 40.0% | |
| GGCTGAAAATTGAATGGTTC+CGG | + | 14484:2807-2826 | MS.gene025148:intron | 40.0% | |
| GGGCTCATCTTGTCAAAAAA+AGG | + | 14484:2883-2902 | MS.gene025148:intron | 40.0% | |
| GGTTCCGCATAAATTTAGCA+CGG | + | 14484:2862-2881 | MS.gene025148:intron | 40.0% | |
| GTGTGTGTACAAACAGCTTA+TGG | + | 14484:1962-1981 | MS.gene025148:CDS | 40.0% | |
| GTTCAGCTTGGAATACACTT+TGG | + | 14484:3828-3847 | MS.gene025148:intron | 40.0% | |
| GTTCCGCATAAATTTAGCAC+GGG | + | 14484:2863-2882 | MS.gene025148:intron | 40.0% | |
| TAAAGACAAGGAAGGAAGCA+TGG | - | 14484:2254-2273 | MS.gene025148:intergenic | 40.0% | |
| TATCCTACCATGCATACCAA+AGG | - | 14484:4192-4211 | MS.gene025148:intergenic | 40.0% | |
| TATGCATGGTAGGATAGCAT+AGG | + | 14484:4196-4215 | MS.gene025148:intron | 40.0% | |
| TATGGTGTAGAAGTTGAGGT+AGG | + | 14484:1980-1999 | MS.gene025148:intron | 40.0% | |
| TCACAAACAACTATGGTGTG+TGG | + | 14484:986-1005 | MS.gene025148:CDS | 40.0% | |
| TCCATGAAAACCATCACGTT+TGG | - | 14484:2404-2423 | MS.gene025148:intergenic | 40.0% | |
| TCCTTATGATCCAAACGTGA+TGG | + | 14484:2391-2410 | MS.gene025148:CDS | 40.0% | |
| TGGAGGAACTGGTAACATTT+AGG | - | 14484:3630-3649 | MS.gene025148:intergenic | 40.0% | |
| TGGATTGTTGTACTGTACAG+TGG | + | 14484:2086-2105 | MS.gene025148:intron | 40.0% | |
| TTGTTTGTGAAAGGGAGATC+CGG | - | 14484:976-995 | MS.gene025148:intergenic | 40.0% | |
| ! | ATTTCAGGTCTTGGACTTGA+AGG | + | 14484:1392-1411 | MS.gene025148:intron | 40.0% |
| ! | CCAATCATATTTTGCAGGAC+AGG | - | 14484:2069-2088 | MS.gene025148:intergenic | 40.0% |
| ! | CTGATTTTTATCGCAGGATG+TGG | + | 14484:4587-4606 | MS.gene025148:intron | 40.0% |
| ! | CTGGTAACATTTAGGGTCTA+AGG | - | 14484:3622-3641 | MS.gene025148:intergenic | 40.0% |
| ! | GAACACTTTTGTACGAGACA+TGG | - | 14484:2498-2517 | MS.gene025148:intergenic | 40.0% |
| ! | GATCTAGTCGTTATTGGTTG+TGG | + | 14484:886-905 | MS.gene025148:CDS | 40.0% |
| ! | TCCAAACGTGATGGTTTTCA+TGG | + | 14484:2400-2419 | MS.gene025148:CDS | 40.0% |
| ! | TTATGAAGAGGTAAGGGCAT+TGG | + | 14484:2705-2724 | MS.gene025148:intron | 40.0% |
| !! | GAATGGTCTTATATCCCAGT+TGG | + | 14484:3286-3305 | MS.gene025148:CDS | 40.0% |
| !! | GGTCTAAGGTTCTAAGCTTA+CGG | - | 14484:3608-3627 | MS.gene025148:intergenic | 40.0% |
| AAACAACTATGGTGTGTGGG+AGG | + | 14484:990-1009 | MS.gene025148:CDS | 45.0% | |
| AAGGAGAATCCATCAATGCG+AGG | + | 14484:3569-3588 | MS.gene025148:CDS | 45.0% | |
| AATGAAAGCTCCCTAGGGAT+AGG | + | 14484:4340-4359 | MS.gene025148:intron | 45.0% | |
| ACTAGTACGATAGGACCGAT+TGG | - | 14484:2966-2985 | MS.gene025148:intergenic | 45.0% | |
| AGGATGTGGCAAGGATTTCT+TGG | + | 14484:4601-4620 | MS.gene025148:intron | 45.0% | |
| AGGATTGTTGAGGCTAGCAA+TGG | + | 14484:1689-1708 | MS.gene025148:CDS | 45.0% | |
| AGGGTAAAAGACTGCCATCA+AGG | - | 14484:3127-3146 | MS.gene025148:intergenic | 45.0% | |
| ATGTGACAATGTCATGCCTG+TGG | - | 14484:3380-3399 | MS.gene025148:intergenic | 45.0% | |
| ATTGAATGGTTCCGGGACTT+TGG | + | 14484:2815-2834 | MS.gene025148:intron | 45.0% | |
| ATTGTGCAGCTGGACATTGA+AGG | + | 14484:3902-3921 | MS.gene025148:CDS | 45.0% | |
| CATCTGCTTTCAGATCCTAC+AGG | + | 14484:4712-4731 | MS.gene025148:CDS | 45.0% | |
| CCAAACATGTTTCCTGCGAT+TGG | - | 14484:2600-2619 | MS.gene025148:intergenic | 45.0% | |
| CCAATCGCAGGAAACATGTT+TGG | + | 14484:2597-2616 | MS.gene025148:intron | 45.0% | |
| CCACCTATCTCTATTGGAGA+TGG | + | 14484:856-875 | MS.gene025148:CDS | 45.0% | |
| CCATCTCCAATAGAGATAGG+TGG | - | 14484:859-878 | MS.gene025148:intergenic | 45.0% | |
| CTATTGCAGTATGAGGTTGG+GGG | + | 14484:1932-1951 | MS.gene025148:CDS | 45.0% | |
| CTCACAACAGAGTAGCCTAT+TGG | - | 14484:3458-3477 | MS.gene025148:intergenic | 45.0% | |
| CTTTCTTCTGCTTACCTGAG+TGG | + | 14484:3945-3964 | MS.gene025148:CDS | 45.0% | |
| GAGCCCGTGCTAAATTTATG+CGG | - | 14484:2869-2888 | MS.gene025148:intergenic | 45.0% | |
| GCTGTTTGTACACACACCTT+TGG | - | 14484:1959-1978 | MS.gene025148:intergenic | 45.0% | |
| GGATAGCATAGGACACGATA+AGG | + | 14484:4207-4226 | MS.gene025148:intron | 45.0% | |
| GGGTAAAAGACTGCCATCAA+GGG | - | 14484:3126-3145 | MS.gene025148:intergenic | 45.0% | |
| GGGTAAATTGCACCAAGTCT+GGG | + | 14484:2206-2225 | MS.gene025148:intron | 45.0% | |
| GTGTGGGAGGACGAATTTAA+AGG | + | 14484:1003-1022 | MS.gene025148:CDS | 45.0% | |
| TAGCGCCATAGCAAGGTTTA+GGG | - | 14484:1817-1836 | MS.gene025148:intergenic | 45.0% | |
| TCAAAACTAGCGCCATAGCA+AGG | - | 14484:1824-1843 | MS.gene025148:intergenic | 45.0% | |
| TCCTACCATGCATACCAAAG+GGG | - | 14484:4190-4209 | MS.gene025148:intergenic | 45.0% | |
| TCTGGGAAGTCCCTAAGTAT+TGG | + | 14484:2223-2242 | MS.gene025148:intron | 45.0% | |
| TTCTGCTTACCTGAGTGGTA+TGG | + | 14484:3950-3969 | MS.gene025148:intron | 45.0% | |
| TTGGTAAGGATCCACCAACT+GGG | - | 14484:3303-3322 | MS.gene025148:intergenic | 45.0% | |
| TTTGGTAAGGATCCACCAAC+TGG | - | 14484:3304-3323 | MS.gene025148:intergenic | 45.0% | |
| ! | AAACAGTGTGCTGACAAGCT+TGG | + | 14484:2109-2128 | MS.gene025148:intron | 45.0% |
| ! | AACAGTGTGCTGACAAGCTT+GGG | + | 14484:2110-2129 | MS.gene025148:intron | 45.0% |
| ! | CTCTGTCGTTTCCTTTCTTG+TGG | - | 14484:3854-3873 | MS.gene025148:intergenic | 45.0% |
| ! | CTGATATTTGCTGCGGTCAT+TGG | + | 14484:3016-3035 | MS.gene025148:intron | 45.0% |
| ! | TTTTATCGCAGGATGTGGCA+AGG | + | 14484:4592-4611 | MS.gene025148:intron | 45.0% |
| !! | GTTTTCAAAAAGTGTGGGCG+TGG | + | 14484:2172-2191 | MS.gene025148:intron | 45.0% |
| !! | TGGTCTTATATCCCAGTTGG+TGG | + | 14484:3289-3308 | MS.gene025148:CDS | 45.0% |
| ACGGCCATAAGAACGTCCAA+TGG | - | 14484:1477-1496 | MS.gene025148:intergenic | 50.0% | |
| ACTTAGGGACTTCCCAGACT+TGG | - | 14484:2221-2240 | MS.gene025148:intergenic | 50.0% | |
| AGCATGCAAATCGTACCTGC+AGG | - | 14484:1753-1772 | MS.gene025148:intergenic | 50.0% | |
| ATGATACTGTAGTGCCCTGC+AGG | + | 14484:1735-1754 | MS.gene025148:CDS | 50.0% | |
| CGGGTAAATTGCACCAAGTC+TGG | + | 14484:2205-2224 | MS.gene025148:intron | 50.0% | |
| CTAGCGCCATAGCAAGGTTT+AGG | - | 14484:1818-1837 | MS.gene025148:intergenic | 50.0% | |
| CTTGCTCTAGCTGCTGAATC+TGG | + | 14484:919-938 | MS.gene025148:CDS | 50.0% | |
| GAGTCAGGTGTCTCGTATCT+TGG | + | 14484:1653-1672 | MS.gene025148:CDS | 50.0% | |
| GCATGCAAATCGTACCTGCA+GGG | - | 14484:1752-1771 | MS.gene025148:intergenic | 50.0% | |
| GCTGCTGAATCTGGCAAGTT+AGG | + | 14484:928-947 | MS.gene025148:CDS | 50.0% | |
| GTTCTTATGGCCGTGTCAGT+CGG | + | 14484:1483-1502 | MS.gene025148:CDS | 50.0% | |
| TCCCCTTTGGTATGCATGGT+AGG | + | 14484:4186-4205 | MS.gene025148:intron | 50.0% | |
| TTGCATCAGGAGCAGCTTCA+GGG | + | 14484:1906-1925 | MS.gene025148:CDS | 50.0% | |
| ! | GAAGCAAATGCCGACTGACA+CGG | - | 14484:1496-1515 | MS.gene025148:intergenic | 50.0% |
| ! | GTTATTGGTTGTGGTCCTGC+TGG | + | 14484:895-914 | MS.gene025148:CDS | 50.0% |
| ! | TGGTTCCGGGACTTTGGAAA+TGG | + | 14484:2821-2840 | MS.gene025148:intron | 50.0% |
| !! | AGGCTTGCTACTGTTGCATC+AGG | + | 14484:1893-1912 | MS.gene025148:intron | 50.0% |
| CAGTCGGCATTTGCTTCACG+AGG | + | 14484:1499-1518 | MS.gene025148:CDS | 55.0% | |
| GACAATGTCATGCCTGTGGC+TGG | - | 14484:3376-3395 | MS.gene025148:intergenic | 55.0% | |
| GTATGAGGTTGGGGGTCCAA+AGG | + | 14484:1940-1959 | MS.gene025148:CDS | 55.0% | |
| GTTGCATCAGGAGCAGCTTC+AGG | + | 14484:1905-1924 | MS.gene025148:CDS | 55.0% | |
| TAGAAGTTGAGGTAGGGCGC+TGG | + | 14484:1987-2006 | MS.gene025148:intron | 55.0% | |
| TGGCAGCTGCACCAAATGCA+AGG | - | 14484:3342-3361 | MS.gene025148:intergenic | 55.0% | |
| TTCCCTAGGTGTGTCGAGTC+AGG | + | 14484:1638-1657 | MS.gene025148:intron | 55.0% | |
| ! | ACACCTGACTCGACACACCT+AGG | - | 14484:1644-1663 | MS.gene025148:intergenic | 55.0% |
| ! | CACCTGACTCGACACACCTA+GGG | - | 14484:1643-1662 | MS.gene025148:intergenic | 55.0% |
| !! | ATTTGGTGCAGCTGCCAGCA+TGG | + | 14484:3345-3364 | MS.gene025148:CDS | 55.0% |
| !! | GTGGGCGTGGCCTTATAAGT+CGG | + | 14484:2185-2204 | MS.gene025148:intron | 55.0% |
| !! | TGGGCGTGGCCTTATAAGTC+GGG | + | 14484:2186-2205 | MS.gene025148:intron | 55.0% |
| AGCATGGTGCATCCAGCCAC+AGG | + | 14484:3361-3380 | MS.gene025148:CDS | 60.0% | |
| GCAGCTAGAGCAAGACCAGC+AGG | - | 14484:913-932 | MS.gene025148:intergenic | 60.0% | |
| TGTGGCTGGATGCACCATGC+TGG | - | 14484:3362-3381 | MS.gene025148:intergenic | 60.0% | |
| !! | GAGGTAGGGCGCTGGCTCTT+TGG | + | 14484:1995-2014 | MS.gene025148:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 14484 | gene | 853 | 4768 | 853 | ID=MS.gene025148 |
| 14484 | mRNA | 853 | 4768 | 853 | ID=MS.gene025148.t1;Parent=MS.gene025148 |
| 14484 | exon | 853 | 1024 | 853 | ID=MS.gene025148.t1.exon1;Parent=MS.gene025148.t1 |
| 14484 | CDS | 853 | 1024 | 853 | ID=cds.MS.gene025148.t1;Parent=MS.gene025148.t1 |
| 14484 | exon | 1399 | 1534 | 1399 | ID=MS.gene025148.t1.exon2;Parent=MS.gene025148.t1 |
| 14484 | CDS | 1399 | 1534 | 1399 | ID=cds.MS.gene025148.t1;Parent=MS.gene025148.t1 |
| 14484 | exon | 1646 | 1756 | 1646 | ID=MS.gene025148.t1.exon3;Parent=MS.gene025148.t1 |
| 14484 | CDS | 1646 | 1756 | 1646 | ID=cds.MS.gene025148.t1;Parent=MS.gene025148.t1 |
| 14484 | exon | 1895 | 1997 | 1895 | ID=MS.gene025148.t1.exon4;Parent=MS.gene025148.t1 |
| 14484 | CDS | 1895 | 1997 | 1895 | ID=cds.MS.gene025148.t1;Parent=MS.gene025148.t1 |
| 14484 | exon | 2380 | 2523 | 2380 | ID=MS.gene025148.t1.exon5;Parent=MS.gene025148.t1 |
| 14484 | CDS | 2380 | 2523 | 2380 | ID=cds.MS.gene025148.t1;Parent=MS.gene025148.t1 |
| 14484 | exon | 2607 | 2714 | 2607 | ID=MS.gene025148.t1.exon6;Parent=MS.gene025148.t1 |
| 14484 | CDS | 2607 | 2714 | 2607 | ID=cds.MS.gene025148.t1;Parent=MS.gene025148.t1 |
| 14484 | exon | 3286 | 3382 | 3286 | ID=MS.gene025148.t1.exon7;Parent=MS.gene025148.t1 |
| 14484 | CDS | 3286 | 3382 | 3286 | ID=cds.MS.gene025148.t1;Parent=MS.gene025148.t1 |
| 14484 | exon | 3462 | 3590 | 3462 | ID=MS.gene025148.t1.exon8;Parent=MS.gene025148.t1 |
| 14484 | CDS | 3462 | 3590 | 3462 | ID=cds.MS.gene025148.t1;Parent=MS.gene025148.t1 |
| 14484 | exon | 3834 | 3966 | 3834 | ID=MS.gene025148.t1.exon9;Parent=MS.gene025148.t1 |
| 14484 | CDS | 3834 | 3966 | 3834 | ID=cds.MS.gene025148.t1;Parent=MS.gene025148.t1 |
| 14484 | exon | 4603 | 4768 | 4603 | ID=MS.gene025148.t1.exon10;Parent=MS.gene025148.t1 |
| 14484 | CDS | 4603 | 4768 | 4603 | ID=cds.MS.gene025148.t1;Parent=MS.gene025148.t1 |
| Gene Sequence |
| Protein sequence |
