Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028012.t1 | XP_003612703.1 | 98.6 | 839 | 12 | 0 | 1 | 839 | 1 | 839 | 0.00E+00 | 1612.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028012.t1 | Q9C516 | 72.0 | 855 | 209 | 11 | 4 | 839 | 5 | 848 | 0.0e+00 | 1154.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028012.t1 | G7K9K2 | 98.6 | 839 | 12 | 0 | 1 | 839 | 1 | 839 | 0.0e+00 | 1612.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene028012 | MS.gene041157 | PPI |
| MS.gene010419 | MS.gene028012 | PPI |
| MS.gene028012 | MS.gene047695 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028012.t1 | MTR_5g027970 | 98.570 | 839 | 12 | 0 | 1 | 839 | 1 | 839 | 0.0 | 1724 |
| MS.gene028012.t1 | MTR_5g027970 | 98.980 | 588 | 6 | 0 | 1 | 588 | 1 | 588 | 0.0 | 1210 |
| MS.gene028012.t1 | MTR_6g071360 | 57.545 | 888 | 307 | 20 | 2 | 839 | 11 | 878 | 0.0 | 1004 |
| MS.gene028012.t1 | MTR_5g018510 | 52.475 | 707 | 309 | 11 | 125 | 815 | 192 | 887 | 0.0 | 721 |
| MS.gene028012.t1 | MTR_5g018510 | 52.334 | 707 | 311 | 10 | 125 | 815 | 192 | 888 | 0.0 | 720 |
| MS.gene028012.t1 | MTR_8g079010 | 54.021 | 659 | 277 | 9 | 171 | 815 | 118 | 764 | 0.0 | 698 |
| MS.gene028012.t1 | MTR_1g034300 | 48.851 | 653 | 311 | 8 | 171 | 813 | 209 | 848 | 0.0 | 608 |
| MS.gene028012.t1 | MTR_1g034300 | 48.851 | 653 | 310 | 8 | 171 | 813 | 209 | 847 | 0.0 | 605 |
| MS.gene028012.t1 | MTR_1g015750 | 32.405 | 395 | 205 | 14 | 422 | 810 | 36 | 374 | 6.93e-52 | 186 |
| MS.gene028012.t1 | MTR_1g015750 | 32.405 | 395 | 205 | 14 | 422 | 810 | 44 | 382 | 1.25e-51 | 186 |
| MS.gene028012.t1 | MTR_1g015750 | 31.987 | 297 | 148 | 10 | 422 | 717 | 36 | 279 | 2.17e-34 | 133 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028012.t1 | AT1G31930 | 67.749 | 862 | 234 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1148 |
| MS.gene028012.t1 | AT1G31930 | 67.749 | 862 | 234 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1148 |
| MS.gene028012.t1 | AT1G31930 | 67.749 | 862 | 234 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1148 |
| MS.gene028012.t1 | AT1G31930 | 67.749 | 862 | 234 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1148 |
| MS.gene028012.t1 | AT1G31930 | 67.749 | 862 | 234 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1148 |
| MS.gene028012.t1 | AT1G31930 | 67.749 | 862 | 234 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1148 |
| MS.gene028012.t1 | AT2G23460 | 50.338 | 739 | 334 | 12 | 96 | 815 | 144 | 868 | 0.0 | 704 |
| MS.gene028012.t1 | AT4G34390 | 45.507 | 690 | 327 | 16 | 161 | 833 | 204 | 861 | 0.0 | 552 |
| MS.gene028012.t1 | AT4G34390 | 43.043 | 690 | 305 | 16 | 161 | 833 | 204 | 822 | 2.12e-166 | 503 |
| MS.gene028012.t1 | AT2G26300 | 31.159 | 414 | 218 | 14 | 408 | 810 | 16 | 373 | 1.29e-51 | 186 |
| MS.gene028012.t1 | AT2G26300 | 31.159 | 414 | 218 | 14 | 408 | 810 | 16 | 373 | 1.29e-51 | 186 |
Find 219 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCAGAAGCTTCTTCTTCT+TGG | 0.179208 | 5.3:-17397253 | MS.gene028012:CDS |
| TGCTTTGAATCATCTTGTTT+TGG | 0.199485 | 5.3:+17395287 | None:intergenic |
| GAATCCAAGCGTCTGAAATT+AGG | 0.205731 | 5.3:-17398470 | MS.gene028012:CDS |
| AGAAAATAAGAGTTTGTTAT+AGG | 0.213096 | 5.3:-17398631 | MS.gene028012:CDS |
| TTGTTAAGAACTAGTATTAA+AGG | 0.230147 | 5.3:+17395217 | None:intergenic |
| ACATAAAAGAGGTTCTTAAA+TGG | 0.262325 | 5.3:-17394964 | MS.gene028012:CDS |
| TCGACAGCTTCGGAATATTT+AGG | 0.266925 | 5.3:-17399031 | MS.gene028012:CDS |
| GGGAAATGGTTTGGCTTTCA+TGG | 0.284339 | 5.3:-17395648 | MS.gene028012:CDS |
| AGTTCAAACTTGAATTTCTC+TGG | 0.305993 | 5.3:-17397819 | MS.gene028012:CDS |
| CTGTATAAGCTTCGAACTTT+GGG | 0.314678 | 5.3:+17395603 | None:intergenic |
| CTAAACCCGGATCTTTCTTC+TGG | 0.316664 | 5.3:-17398845 | MS.gene028012:CDS |
| GTCCACGTGATACTCACTTT+TGG | 0.317550 | 5.3:-17397541 | MS.gene028012:CDS |
| TTGCCGATGTCACGTATTTC+CGG | 0.319193 | 5.3:-17398935 | MS.gene028012:CDS |
| AGGTTCCCCTGCTCACATTA+TGG | 0.319349 | 5.3:-17396843 | MS.gene028012:CDS |
| CTTCTTCTTCTTGGAATTCA+AGG | 0.319947 | 5.3:-17397244 | MS.gene028012:CDS |
| CTTCTTGGAATTCAAGGGTC+TGG | 0.324531 | 5.3:-17397238 | MS.gene028012:CDS |
| ACGACAAAGAATCTGGTCTA+TGG | 0.324545 | 5.3:-17398247 | MS.gene028012:CDS |
| GCCTTCAGCTTCACCGGCTT+CGG | 0.330535 | 5.3:-17398819 | MS.gene028012:CDS |
| AGAATATAAGAGGAAACATT+TGG | 0.337123 | 5.3:-17397481 | MS.gene028012:CDS |
| AGACGCTTGGATTCGTCAAT+AGG | 0.342855 | 5.3:+17398479 | None:intergenic |
| CAATATGCTTACTTGGTCAT+TGG | 0.347638 | 5.3:+17395557 | None:intergenic |
| GGTTGTGAAGCCGGCGTATC+CGG | 0.350381 | 5.3:-17398687 | MS.gene028012:CDS |
| ATCATAATAGAGGAGATAAT+TGG | 0.353939 | 5.3:-17399123 | MS.gene028012:CDS |
| GTTACACATTTGCGCCCTTC+AGG | 0.359236 | 5.3:+17398515 | None:intergenic |
| TCTGTATAAGCTTCGAACTT+TGG | 0.372490 | 5.3:+17395602 | None:intergenic |
| CAGCTGTGTGCTCAGGGCGA+TGG | 0.385325 | 5.3:-17398546 | MS.gene028012:CDS |
| ATAACTGATCGTAGTCGCTT+AGG | 0.393112 | 5.3:+17395347 | None:intergenic |
| AATCCAAGCGTCTGAAATTA+GGG | 0.394591 | 5.3:-17398469 | MS.gene028012:CDS |
| ACATCTAGAGGCTCAACTTT+CGG | 0.399792 | 5.3:+17398986 | None:intergenic |
| AAGAAGTACTCCGCAACATC+TGG | 0.402272 | 5.3:+17396261 | None:intergenic |
| TTTGTTATAGGTGTGGTAAA+GGG | 0.404012 | 5.3:-17398619 | MS.gene028012:CDS |
| TCACGTATTTCCGGTGTGAC+GGG | 0.404061 | 5.3:-17398926 | MS.gene028012:CDS |
| AGCTGAAGCCTGGTAGATAT+TGG | 0.404152 | 5.3:-17398271 | MS.gene028012:CDS |
| GAGAAAGATGAAAATTACTA+TGG | 0.405466 | 5.3:-17394935 | MS.gene028012:CDS |
| AATCATAGTCCAAGGGTGTC+TGG | 0.406251 | 5.3:-17398896 | MS.gene028012:CDS |
| GGTTACTCAGGGAAATGGTT+TGG | 0.408020 | 5.3:-17395657 | MS.gene028012:CDS |
| GCATATTCACGTGTCGCTGC+AGG | 0.408474 | 5.3:+17396360 | None:intergenic |
| ATCTCAGGTACCAACTCATA+AGG | 0.412874 | 5.3:-17395450 | MS.gene028012:intron |
| ATTGCAGCAGCTGTGTGCTC+AGG | 0.424032 | 5.3:-17398553 | MS.gene028012:CDS |
| TTCCTGTGATGGATGCATAA+AGG | 0.425207 | 5.3:+17395050 | None:intergenic |
| TTTCCCTAATTTCAGACGCT+TGG | 0.425388 | 5.3:+17398466 | None:intergenic |
| AGGAGATAATTGGAGGGAAG+TGG | 0.428042 | 5.3:-17399113 | MS.gene028012:CDS |
| CTTCAGCTTGCGTGGAGGTA+AGG | 0.430576 | 5.3:+17398286 | None:intergenic |
| CTCCTGGACATTATAGCCAC+TGG | 0.433165 | 5.3:-17396402 | MS.gene028012:CDS |
| CATAAAAGAGGTTCTTAAAT+GGG | 0.433650 | 5.3:-17394963 | MS.gene028012:CDS |
| TTGTTGTCGTGTGCGCGAAC+GGG | 0.436899 | 5.3:+17395124 | None:intergenic |
| GAAGGTCAAAAGAATATAAG+AGG | 0.437475 | 5.3:-17397491 | MS.gene028012:CDS |
| TATTGGTACGACAAAGAATC+TGG | 0.439746 | 5.3:-17398254 | MS.gene028012:CDS |
| AGCTGTGTGCTCAGGGCGAT+GGG | 0.439917 | 5.3:-17398545 | MS.gene028012:CDS |
| AGTAAGTCTTCCATCTCATC+AGG | 0.442958 | 5.3:+17398317 | None:intergenic |
| CTTCCATCTCATCAGGTTTG+AGG | 0.443955 | 5.3:+17398324 | None:intergenic |
| GAATATAAGAGGAAACATTT+GGG | 0.444612 | 5.3:-17397480 | MS.gene028012:CDS |
| GTTCCGCTGCCATTGCTGTC+TGG | 0.451485 | 5.3:+17395316 | None:intergenic |
| TAACAAATACGACGTCTTCG+AGG | 0.451533 | 5.3:-17395200 | MS.gene028012:CDS |
| TTGAAGGTCACTTGTATCGC+TGG | 0.452762 | 5.3:+17396309 | None:intergenic |
| GAAGGGGTTACTCAGGGAAA+TGG | 0.456344 | 5.3:-17395662 | MS.gene028012:CDS |
| GTTTGTTATAGGTGTGGTAA+AGG | 0.458659 | 5.3:-17398620 | MS.gene028012:CDS |
| ATCCCGACTGTTGAGTCCTC+TGG | 0.461629 | 5.3:-17398429 | MS.gene028012:CDS |
| ACGGTATTAAAAGTTACAAC+AGG | 0.462099 | 5.3:+17398740 | None:intergenic |
| GGTGGTGGAGGTTGTGAAGC+CGG | 0.462707 | 5.3:-17398696 | MS.gene028012:CDS |
| TTTGAACTAATGATTCTGTC+AGG | 0.463062 | 5.3:+17397834 | None:intergenic |
| TTCGGTACTTCATAAGAAAC+CGG | 0.463768 | 5.3:+17399004 | None:intergenic |
| TAACTGATCGTAGTCGCTTA+GGG | 0.465956 | 5.3:+17395348 | None:intergenic |
| AACTCGAATTGAGGGTACTC+AGG | 0.466428 | 5.3:-17397731 | MS.gene028012:CDS |
| GCAACCTTCGCTCATGCCCT+TGG | 0.468837 | 5.3:+17395420 | None:intergenic |
| GTTGTTGTCGTGTGCGCGAA+CGG | 0.469425 | 5.3:+17395123 | None:intergenic |
| TGGCATTCACCCTTATGAGT+TGG | 0.476657 | 5.3:+17395440 | None:intergenic |
| TCTTGATTACTCGACAGCTT+CGG | 0.477356 | 5.3:-17399041 | MS.gene028012:CDS |
| GTTCAAACTTGAATTTCTCT+GGG | 0.480058 | 5.3:-17397818 | MS.gene028012:CDS |
| TCTGAACTTCCAGACACCCT+TGG | 0.482123 | 5.3:+17398887 | None:intergenic |
| CGACAAAGAATCTGGTCTAT+GGG | 0.487042 | 5.3:-17398246 | MS.gene028012:CDS |
| GGCGAACCAGAAGAAAGATC+CGG | 0.487194 | 5.3:+17398839 | None:intergenic |
| GACACCCTTGGACTATGATT+AGG | 0.488171 | 5.3:+17398899 | None:intergenic |
| GATGAGATGGAAGACTTACT+TGG | 0.489124 | 5.3:-17398314 | MS.gene028012:CDS |
| TTCTCTCTACCCTATCCTCA+TGG | 0.490716 | 5.3:-17397346 | MS.gene028012:CDS |
| GACTCAGAGGAAAGAGGTGG+TGG | 0.491543 | 5.3:-17398711 | MS.gene028012:CDS |
| AAGCTTGATGTGCTAGTGAT+TGG | 0.491832 | 5.3:+17395101 | None:intergenic |
| TCCTGGACATTATAGCCACT+GGG | 0.495286 | 5.3:-17396401 | MS.gene028012:CDS |
| GAGGCTGTTTCTAGAATGAA+TGG | 0.497615 | 5.3:-17396869 | MS.gene028012:CDS |
| TTCACAACTCCAACGTACTC+CGG | 0.498553 | 5.3:+17398668 | None:intergenic |
| GTCACGTATTTCCGGTGTGA+CGG | 0.499022 | 5.3:-17398927 | MS.gene028012:CDS |
| AACACTGAGGTTTACATCAA+TGG | 0.499687 | 5.3:-17397768 | MS.gene028012:CDS |
| TTCGGAATATTTAGGTCCAC+CGG | 0.500662 | 5.3:-17399023 | MS.gene028012:CDS |
| GAACCATTCACAAGCGTTGA+GGG | 0.500930 | 5.3:+17395159 | None:intergenic |
| AAAGATATGGATCATAATAG+AGG | 0.501836 | 5.3:-17399133 | None:intergenic |
| TTGCGGAGTACTTCTTAAGC+CGG | 0.502186 | 5.3:-17396254 | MS.gene028012:CDS |
| TCAAGATTAGAAGCGTCATC+AGG | 0.502867 | 5.3:+17399058 | None:intergenic |
| CCAGCTTCCATAATGTGAGC+AGG | 0.503562 | 5.3:+17396836 | None:intergenic |
| ATATGCAGAAGGGGTTACTC+AGG | 0.507616 | 5.3:-17395669 | MS.gene028012:CDS |
| GAAAGCGGAGAAAGAATGTT+CGG | 0.508911 | 5.3:-17398390 | MS.gene028012:CDS |
| CCGTTGACACTCAACTGCTC+TGG | 0.510346 | 5.3:+17398353 | None:intergenic |
| TTCAGCTTGCGTGGAGGTAA+GGG | 0.513690 | 5.3:+17398287 | None:intergenic |
| TTCGAATGTTGCTTCTAAGC+CGG | 0.514313 | 5.3:-17398786 | MS.gene028012:CDS |
| TTCTTCTTCTTGGAATTCAA+GGG | 0.514846 | 5.3:-17397243 | MS.gene028012:CDS |
| GACCTTTATGCATCCATCAC+AGG | 0.514967 | 5.3:-17395052 | MS.gene028012:CDS |
| ATGAGGCTGTCCATGAGGAT+AGG | 0.516805 | 5.3:+17397336 | None:intergenic |
| CCTGCTCACATTATGGAAGC+TGG | 0.518201 | 5.3:-17396836 | MS.gene028012:intron |
| TCACTTCCTTCCAGATGTTG+CGG | 0.521515 | 5.3:-17396271 | MS.gene028012:CDS |
| CGCAAATGTGTAACATGCAT+CGG | 0.521554 | 5.3:-17398506 | MS.gene028012:CDS |
| TGGTTCGCCTTCAGCTTCAC+CGG | 0.523608 | 5.3:-17398825 | MS.gene028012:CDS |
| TATCCCTCAACGCTTGTGAA+TGG | 0.523776 | 5.3:-17395162 | MS.gene028012:CDS |
| ATATCTGTAATTGAATCCTC+AGG | 0.524085 | 5.3:+17394908 | None:intergenic |
| CCTCCACGCAAGCTGAAGCC+TGG | 0.524656 | 5.3:-17398281 | MS.gene028012:CDS |
| TTAGCACTGATGCTAGTAAC+GGG | 0.524938 | 5.3:-17397791 | MS.gene028012:CDS |
| GAAGGATTATGAACCGAAGC+CGG | 0.527127 | 5.3:+17398806 | None:intergenic |
| CTCTTCGCCTCATTAATCAC+CGG | 0.527445 | 5.3:+17398767 | None:intergenic |
| TGAAATTAGGGAAATATTCG+AGG | 0.529424 | 5.3:-17398457 | MS.gene028012:CDS |
| TCTCAGGTACCAACTCATAA+GGG | 0.529434 | 5.3:-17395449 | MS.gene028012:intron |
| CCCCAGTGGCTATAATGTCC+AGG | 0.529739 | 5.3:+17396400 | None:intergenic |
| GAAATACGTGACATCGGCAA+AGG | 0.530158 | 5.3:+17398938 | None:intergenic |
| GTCTGGAAGTTCAGAATCTG+TGG | 0.530261 | 5.3:-17398879 | MS.gene028012:CDS |
| ATAGGTGTGGTAAAGGGAAG+TGG | 0.530493 | 5.3:-17398613 | MS.gene028012:CDS |
| TTCCACACTTCTTCGACTAG+TGG | 0.534470 | 5.3:+17396336 | None:intergenic |
| AAATACGTGACATCGGCAAA+GGG | 0.535014 | 5.3:+17398939 | None:intergenic |
| CGACTATGAACCTTCTGAAA+GGG | 0.535573 | 5.3:-17395699 | MS.gene028012:CDS |
| ATAATTTGCTTAACTTCCAG+AGG | 0.535842 | 5.3:+17398413 | None:intergenic |
| TGAGGCTGTCCATGAGGATA+GGG | 0.536471 | 5.3:+17397337 | None:intergenic |
| AATCTTTATTCAGGTAGCAA+TGG | 0.537742 | 5.3:-17396492 | MS.gene028012:intron |
| TTGTTGCACAAGTTAGGGCA+AGG | 0.539883 | 5.3:-17395018 | MS.gene028012:CDS |
| AGCATTCAAGTACATAAAAG+AGG | 0.541232 | 5.3:-17394975 | MS.gene028012:CDS |
| CAAATTTACTGATCAAGAGC+TGG | 0.541738 | 5.3:-17396972 | MS.gene028012:CDS |
| AGGATAGGGTAGAGAGAAGA+GGG | 0.541964 | 5.3:+17397351 | None:intergenic |
| TATAATGTCCAGGAGCCAAT+CGG | 0.542069 | 5.3:+17396410 | None:intergenic |
| GATTACAAAACTCGAATTGA+GGG | 0.543174 | 5.3:-17397739 | MS.gene028012:CDS |
| TCTCCTCAAACCTGATGAGA+TGG | 0.546849 | 5.3:-17398327 | MS.gene028012:CDS |
| TATCCTCATGGACAGCCTCA+TGG | 0.548421 | 5.3:-17397334 | MS.gene028012:CDS |
| AACTAGCACCATGTTTAAGC+AGG | 0.548505 | 5.3:-17397215 | MS.gene028012:intron |
| AAACAAGATGATTCAAAGCA+AGG | 0.551964 | 5.3:-17395284 | MS.gene028012:CDS |
| ATAATAGAGGAGATAATTGG+AGG | 0.553110 | 5.3:-17399120 | MS.gene028012:CDS |
| TTGCAGCAGCTGTGTGCTCA+GGG | 0.553376 | 5.3:-17398552 | MS.gene028012:CDS |
| TTGTCGTACCAATATCTACC+AGG | 0.553776 | 5.3:+17398263 | None:intergenic |
| TTCTAAGCCGGTGATTAATG+AGG | 0.555132 | 5.3:-17398774 | MS.gene028012:CDS |
| AAGAGGAAACATTTGGGAGA+AGG | 0.555224 | 5.3:-17397474 | MS.gene028012:intron |
| CTACCAGGCTTCAGCTTGCG+TGG | 0.558966 | 5.3:+17398278 | None:intergenic |
| TGCGGAGTACTTCTTAAGCC+GGG | 0.559400 | 5.3:-17396253 | MS.gene028012:intron |
| CCAGAGCAGTTGAGTGTCAA+CGG | 0.559543 | 5.3:-17398353 | MS.gene028012:CDS |
| GGTCTCCTAATCATAGTCCA+AGG | 0.562082 | 5.3:-17398904 | MS.gene028012:CDS |
| GTGAAGAAGATGCTTCCGCC+GGG | 0.565713 | 5.3:-17399091 | MS.gene028012:CDS |
| TTGGTTGCAACTGAGCATCA+AGG | 0.566584 | 5.3:+17395576 | None:intergenic |
| CGATGGGATCAATGCCTGAA+GGG | 0.567041 | 5.3:-17398529 | MS.gene028012:CDS |
| AAAGGAGTGTCTTTGAAACA+AGG | 0.567459 | 5.3:+17395235 | None:intergenic |
| GCTTGGATTCGTCAATAGGC+TGG | 0.567856 | 5.3:+17398483 | None:intergenic |
| ATAAGAGTTTGTTATAGGTG+TGG | 0.569468 | 5.3:-17398626 | MS.gene028012:CDS |
| TAGGTGTGGTAAAGGGAAGT+GGG | 0.572746 | 5.3:-17398612 | MS.gene028012:CDS |
| CTTCCAGAGGACTCAACAGT+CGG | 0.574189 | 5.3:+17398426 | None:intergenic |
| TCAGAGGAAAGAGGTGGTGG+AGG | 0.574303 | 5.3:-17398708 | MS.gene028012:CDS |
| ACTCATAAGGGTGAATGCCA+AGG | 0.574599 | 5.3:-17395437 | MS.gene028012:CDS |
| AGATTACAAAACTCGAATTG+AGG | 0.575057 | 5.3:-17397740 | MS.gene028012:CDS |
| GGTGAAGAAGATGCTTCCGC+CGG | 0.575635 | 5.3:-17399092 | MS.gene028012:CDS |
| GGTTTCTGTGTTACTAAACC+CGG | 0.577540 | 5.3:-17398858 | MS.gene028012:CDS |
| CCTCTGAACTTCACATCTAG+AGG | 0.577758 | 5.3:+17398974 | None:intergenic |
| GCGAACCAGAAGAAAGATCC+GGG | 0.578672 | 5.3:+17398840 | None:intergenic |
| TTCCAGAGGACTCAACAGTC+GGG | 0.579300 | 5.3:+17398427 | None:intergenic |
| CAGCTTCCATAATGTGAGCA+GGG | 0.579486 | 5.3:+17396837 | None:intergenic |
| TGAACCATTCACAAGCGTTG+AGG | 0.581430 | 5.3:+17395158 | None:intergenic |
| TATAGTATGTCCCTTTCAGA+AGG | 0.581848 | 5.3:+17395689 | None:intergenic |
| TGTTGCACAAGTTAGGGCAA+GGG | 0.583819 | 5.3:-17395017 | MS.gene028012:CDS |
| TAATAGAGGAGATAATTGGA+GGG | 0.587246 | 5.3:-17399119 | MS.gene028012:CDS |
| ACTCGAATTGAGGGTACTCA+GGG | 0.588057 | 5.3:-17397730 | MS.gene028012:intron |
| GCGATGGGATCAATGCCTGA+AGG | 0.590546 | 5.3:-17398530 | MS.gene028012:CDS |
| TTCAAGATATTTAGGAACTG+TGG | 0.591645 | 5.3:+17397285 | None:intergenic |
| AGAATCTGGTCTATGGGGAA+AGG | 0.592126 | 5.3:-17398240 | MS.gene028012:intron |
| GGCTTAGAAGCAACATTCGA+AGG | 0.592724 | 5.3:+17398788 | None:intergenic |
| CATATTCACGTGTCGCTGCA+GGG | 0.596003 | 5.3:+17396361 | None:intergenic |
| GAGGATAGGGTAGAGAGAAG+AGG | 0.598813 | 5.3:+17397350 | None:intergenic |
| TGAAAGGACTCAGAGGAAAG+AGG | 0.599318 | 5.3:-17398717 | MS.gene028012:CDS |
| CACCACTAGTCGAAGAAGTG+TGG | 0.599546 | 5.3:-17396338 | MS.gene028012:CDS |
| AAGGAGTGTCTTTGAAACAA+GGG | 0.599710 | 5.3:+17395236 | None:intergenic |
| CCTCTAGATGTGAAGTTCAG+AGG | 0.601302 | 5.3:-17398974 | MS.gene028012:CDS |
| CACGTATTTCCGGTGTGACG+GGG | 0.601482 | 5.3:-17398925 | MS.gene028012:CDS |
| CTTAGCACTGATGCTAGTAA+CGG | 0.601560 | 5.3:-17397792 | MS.gene028012:CDS |
| ACGACTATGAACCTTCTGAA+AGG | 0.605948 | 5.3:-17395700 | MS.gene028012:CDS |
| GTTTGAAGATGTTAGAGCAG+TGG | 0.606106 | 5.3:-17395383 | MS.gene028012:CDS |
| GCATGAGCGAAGGTTGCAAG+TGG | 0.608881 | 5.3:-17395414 | MS.gene028012:CDS |
| CTCATAAGGGTGAATGCCAA+GGG | 0.609756 | 5.3:-17395436 | MS.gene028012:CDS |
| GCATCTATTCTCTCAACCCA+AGG | 0.609797 | 5.3:-17396446 | MS.gene028012:CDS |
| AAGCCATACCTGCTTAAACA+TGG | 0.609945 | 5.3:+17397207 | None:intergenic |
| AATGCCAAGGGCATGAGCGA+AGG | 0.610410 | 5.3:-17395424 | MS.gene028012:CDS |
| TTTCCTCTGAGTCCTTTCAA+CGG | 0.611134 | 5.3:+17398721 | None:intergenic |
| GGGACATACTATATGCAGAA+GGG | 0.611389 | 5.3:-17395679 | MS.gene028012:CDS |
| ACCGAAGCCGGTGAAGCTGA+AGG | 0.614449 | 5.3:+17398818 | None:intergenic |
| GGACATACTATATGCAGAAG+GGG | 0.618757 | 5.3:-17395678 | MS.gene028012:CDS |
| TTATTCAGGTAGCAATGGTG+AGG | 0.619701 | 5.3:-17396487 | MS.gene028012:intron |
| GTCTCCTAATCATAGTCCAA+GGG | 0.620517 | 5.3:-17398903 | MS.gene028012:CDS |
| AGTTAAGCAAATTATGAAAG+CGG | 0.624149 | 5.3:-17398405 | MS.gene028012:CDS |
| AGTACTCCGCAACATCTGGA+AGG | 0.629530 | 5.3:+17396265 | None:intergenic |
| GCACCAGACAGCAATGGCAG+CGG | 0.631434 | 5.3:-17395319 | MS.gene028012:CDS |
| GAAATTAGGGAAATATTCGA+GGG | 0.635307 | 5.3:-17398456 | MS.gene028012:CDS |
| AGGGACATACTATATGCAGA+AGG | 0.636022 | 5.3:-17395680 | MS.gene028012:CDS |
| GACAAAGAATCTGGTCTATG+GGG | 0.638895 | 5.3:-17398245 | MS.gene028012:CDS |
| ATTTACTGATCAAGAGCTGG+AGG | 0.639867 | 5.3:-17396969 | MS.gene028012:CDS |
| TTATGATGATGGTCGTTACG+AGG | 0.640902 | 5.3:-17397516 | MS.gene028012:CDS |
| GTTTCTAGAATGAATGGACA+AGG | 0.641804 | 5.3:-17396863 | MS.gene028012:CDS |
| TATCTTGCACCAGACAGCAA+TGG | 0.641825 | 5.3:-17395325 | MS.gene028012:CDS |
| GATGGTCGTTACGAGGAGGA+AGG | 0.643902 | 5.3:-17397509 | MS.gene028012:CDS |
| AGCTTCCATAATGTGAGCAG+GGG | 0.649962 | 5.3:+17396838 | None:intergenic |
| TCTGTAATTGAATCCTCAGG+TGG | 0.650948 | 5.3:+17394911 | None:intergenic |
| CGGTGATTAATGAGGCGAAG+AGG | 0.653038 | 5.3:-17398766 | MS.gene028012:CDS |
| TCATCAGGAACAGAAGCACC+CGG | 0.654089 | 5.3:+17399073 | None:intergenic |
| TGATGATGGTCGTTACGAGG+AGG | 0.655963 | 5.3:-17397513 | MS.gene028012:CDS |
| ATTAGGAGACCCCGTCACAC+CGG | 0.657996 | 5.3:+17398916 | None:intergenic |
| CCGGCGTATCCGGAGTACGT+TGG | 0.658309 | 5.3:-17398677 | MS.gene028012:CDS |
| TATGCAGAAGGGGTTACTCA+GGG | 0.660136 | 5.3:-17395668 | MS.gene028012:CDS |
| CCAGGCTTCAGCTTGCGTGG+AGG | 0.664286 | 5.3:+17398281 | None:intergenic |
| GGTACTTCATAAGAAACCGG+TGG | 0.665395 | 5.3:+17399007 | None:intergenic |
| GATCCATGAGGCTGTCCATG+AGG | 0.673737 | 5.3:+17397331 | None:intergenic |
| GCCTCGTCTCTTGATCCATG+AGG | 0.673748 | 5.3:+17397319 | None:intergenic |
| CATGAGCGAAGGTTGCAAGT+GGG | 0.675143 | 5.3:-17395413 | MS.gene028012:CDS |
| CCAACGTACTCCGGATACGC+CGG | 0.685156 | 5.3:+17398677 | None:intergenic |
| ACCCAAAAGTGAGTATCACG+TGG | 0.685386 | 5.3:+17397539 | None:intergenic |
| ACACCGGAAATACGTGACAT+CGG | 0.696010 | 5.3:+17398932 | None:intergenic |
| GCCTCATGGATCAAGAGACG+AGG | 0.704715 | 5.3:-17397320 | MS.gene028012:CDS |
| AAATTACTATGGTCCACCTG+AGG | 0.707677 | 5.3:-17394924 | MS.gene028012:CDS |
| AAGGACTCAGAGGAAAGAGG+TGG | 0.708006 | 5.3:-17398714 | MS.gene028012:CDS |
| ATACCGTTGAAAGGACTCAG+AGG | 0.712232 | 5.3:-17398724 | MS.gene028012:CDS |
| CCTGGACATTATAGCCACTG+GGG | 0.716191 | 5.3:-17396400 | MS.gene028012:CDS |
| TGCTAGTAACGGGAACACTG+AGG | 0.725800 | 5.3:-17397781 | MS.gene028012:CDS |
| GAATGCATCTAAATCCCCAG+TGG | 0.756546 | 5.3:+17396386 | None:intergenic |
| TCAGGAACAGAAGCACCCGG+CGG | 0.793880 | 5.3:+17399076 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGTTAATATGTACTTAAT+GGG | + | chr5.3:17398523-17398542 | None:intergenic | 15.0% |
| !! | TATTGTTAATATGTACTTAA+TGG | + | chr5.3:17398524-17398543 | None:intergenic | 15.0% |
| !! | AACTGAAAATTCAAAGAAAA+AGG | + | chr5.3:17396429-17396448 | None:intergenic | 20.0% |
| !! | AATTTACAGATGCTATAATT+AGG | - | chr5.3:17397870-17397889 | MS.gene028012:intron | 20.0% |
| !! | ATTTACAGATGCTATAATTA+GGG | - | chr5.3:17397871-17397890 | MS.gene028012:intron | 20.0% |
| !! | TAATCCGAATATTAAAATAG+TGG | + | chr5.3:17396360-17396379 | None:intergenic | 20.0% |
| !! | TCCTTATCATTATCATATTT+CGG | - | chr5.3:17396380-17396399 | MS.gene028012:CDS | 20.0% |
| !! | TTAATGTTCAGAATGAATAA+TGG | + | chr5.3:17397850-17397869 | None:intergenic | 20.0% |
| !! | TTGTTAAGAACTAGTATTAA+AGG | + | chr5.3:17398790-17398809 | None:intergenic | 20.0% |
| !!! | AGAAAATAAGAGTTTGTTAT+AGG | - | chr5.3:17395373-17395392 | MS.gene028012:CDS | 20.0% |
| !!! | ATAAGTCAAACTTATGATTT+TGG | + | chr5.3:17395895-17395914 | None:intergenic | 20.0% |
| !!! | TATGATTTTGGAGATAAAAT+TGG | + | chr5.3:17395883-17395902 | None:intergenic | 20.0% |
| !!! | TTTGCCACTATTTTAATATT+CGG | - | chr5.3:17396353-17396372 | MS.gene028012:CDS | 20.0% |
| !!! | TTTTTCTGTTCAAGATATTT+AGG | + | chr5.3:17396730-17396749 | None:intergenic | 20.0% |
| !!! | TTTTTCTTTGAATTTTCAGT+TGG | - | chr5.3:17396428-17396447 | MS.gene028012:CDS | 20.0% |
| ! | AATGAAAGCAGAAATATTCT+CGG | + | chr5.3:17395811-17395830 | None:intergenic | 25.0% |
| ! | ACATAAAAGAGGTTCTTAAA+TGG | - | chr5.3:17399040-17399059 | MS.gene028012:CDS | 25.0% |
| ! | ACCTGAATAAAGATTGAAAT+AGG | + | chr5.3:17397507-17397526 | None:intergenic | 25.0% |
| ! | AGAATATAAGAGGAAACATT+TGG | - | chr5.3:17396523-17396542 | MS.gene028012:intron | 25.0% |
| ! | AGATATTCAATATGCTTACT+TGG | + | chr5.3:17398457-17398476 | None:intergenic | 25.0% |
| ! | AGTAAGCATATTGAATATCT+AGG | - | chr5.3:17398457-17398476 | MS.gene028012:CDS | 25.0% |
| ! | AGTTAAGCAAATTATGAAAG+CGG | - | chr5.3:17395599-17395618 | MS.gene028012:CDS | 25.0% |
| ! | ATACAATCTATAAGCTATAC+TGG | + | chr5.3:17398025-17398044 | None:intergenic | 25.0% |
| ! | ATCATAATAGAGGAGATAAT+TGG | - | chr5.3:17394881-17394900 | MS.gene028012:CDS | 25.0% |
| ! | ATGTACTTAATGGGAAAAAA+TGG | + | chr5.3:17398514-17398533 | None:intergenic | 25.0% |
| ! | CAATATTTCTTTGATATCTC+AGG | - | chr5.3:17398539-17398558 | MS.gene028012:CDS | 25.0% |
| ! | CATAAAAGAGGTTCTTAAAT+GGG | - | chr5.3:17399041-17399060 | MS.gene028012:CDS | 25.0% |
| ! | CCTGAATAAAGATTGAAATA+GGG | + | chr5.3:17397506-17397525 | None:intergenic | 25.0% |
| ! | GAATATAAGAGGAAACATTT+GGG | - | chr5.3:17396524-17396543 | MS.gene028012:intron | 25.0% |
| ! | GAGAAAGATGAAAATTACTA+TGG | - | chr5.3:17399069-17399088 | MS.gene028012:CDS | 25.0% |
| ! | GTATTCACTTAAATACTTGT+AGG | - | chr5.3:17396552-17396571 | MS.gene028012:intron | 25.0% |
| ! | TCTGACTATGAATATAGATT+CGG | - | chr5.3:17397402-17397421 | MS.gene028012:intron | 25.0% |
| !! | GGAATATTATGTTTTCAGTT+GGG | - | chr5.3:17395842-17395861 | MS.gene028012:intron | 25.0% |
| !! | TAACTTTTAATACCGTTGAA+AGG | - | chr5.3:17395271-17395290 | MS.gene028012:CDS | 25.0% |
| !! | TAATGATATCAGAAACCTTT+TGG | - | chr5.3:17397473-17397492 | MS.gene028012:intron | 25.0% |
| !! | TATCTTAGCATTTTACTTGA+TGG | - | chr5.3:17397093-17397112 | MS.gene028012:intron | 25.0% |
| !! | TGGAATATTATGTTTTCAGT+TGG | - | chr5.3:17395841-17395860 | MS.gene028012:intron | 25.0% |
| AAAAAGTTTCTTTCCTGTGA+TGG | + | chr5.3:17398968-17398987 | None:intergenic | 30.0% | |
| AAACAAGATGATTCAAAGCA+AGG | - | chr5.3:17398720-17398739 | MS.gene028012:CDS | 30.0% | |
| AAATAGGGTAAAACACCAAA+AGG | + | chr5.3:17397491-17397510 | None:intergenic | 30.0% | |
| AAGCATATTGAATATCTAGG+AGG | - | chr5.3:17398460-17398479 | MS.gene028012:CDS | 30.0% | |
| AATCTTTATTCAGGTAGCAA+TGG | - | chr5.3:17397512-17397531 | MS.gene028012:CDS | 30.0% | |
| ACGGTATTAAAAGTTACAAC+AGG | + | chr5.3:17395267-17395286 | None:intergenic | 30.0% | |
| AGATTACAAAACTCGAATTG+AGG | - | chr5.3:17396264-17396283 | MS.gene028012:CDS | 30.0% | |
| AGCATTCAAGTACATAAAAG+AGG | - | chr5.3:17399029-17399048 | MS.gene028012:CDS | 30.0% | |
| AGGTGTTAATGTTAATTCTG+CGG | - | chr5.3:17397426-17397445 | MS.gene028012:intron | 30.0% | |
| AGTTCAAACTTGAATTTCTC+TGG | - | chr5.3:17396185-17396204 | MS.gene028012:intron | 30.0% | |
| ATAATAGAGGAGATAATTGG+AGG | - | chr5.3:17394884-17394903 | MS.gene028012:CDS | 30.0% | |
| ATATCTGTAATTGAATCCTC+AGG | + | chr5.3:17399099-17399118 | None:intergenic | 30.0% | |
| ATGTTTCGAATGCATGTTTA+GGG | + | chr5.3:17397326-17397345 | None:intergenic | 30.0% | |
| CAAACATGACCTAAGTTTAT+TGG | - | chr5.3:17398147-17398166 | MS.gene028012:intron | 30.0% | |
| CAATAAACTTAGGTCATGTT+TGG | + | chr5.3:17398149-17398168 | None:intergenic | 30.0% | |
| CCCTATTTCAATCTTTATTC+AGG | - | chr5.3:17397503-17397522 | MS.gene028012:CDS | 30.0% | |
| CGTTATTCATTTGATAGGAA+GGG | - | chr5.3:17396141-17396160 | MS.gene028012:intron | 30.0% | |
| GAAATTAGGGAAATATTCGA+GGG | - | chr5.3:17395548-17395567 | MS.gene028012:intron | 30.0% | |
| GAAGGTCAAAAGAATATAAG+AGG | - | chr5.3:17396513-17396532 | MS.gene028012:intron | 30.0% | |
| GATTACAAAACTCGAATTGA+GGG | - | chr5.3:17396265-17396284 | MS.gene028012:CDS | 30.0% | |
| GCTATGCATCATAATAGAAA+CGG | - | chr5.3:17398169-17398188 | MS.gene028012:intron | 30.0% | |
| GTTATTCATTTGATAGGAAG+GGG | - | chr5.3:17396142-17396161 | MS.gene028012:intron | 30.0% | |
| GTTCAAACTTGAATTTCTCT+GGG | - | chr5.3:17396186-17396205 | MS.gene028012:intron | 30.0% | |
| TAATAGAGGAGATAATTGGA+GGG | - | chr5.3:17394885-17394904 | MS.gene028012:CDS | 30.0% | |
| TAATTAGGGATGGTTTAGAT+TGG | - | chr5.3:17397885-17397904 | MS.gene028012:intron | 30.0% | |
| TAGTGGCAAAAAAACTCTAT+TGG | + | chr5.3:17396343-17396362 | None:intergenic | 30.0% | |
| TATAACATGATTCTCTTCTG+CGG | - | chr5.3:17396967-17396986 | MS.gene028012:CDS | 30.0% | |
| TCGTTATTCATTTGATAGGA+AGG | - | chr5.3:17396140-17396159 | MS.gene028012:intron | 30.0% | |
| TCTGTCGTTATTCATTTGAT+AGG | - | chr5.3:17396136-17396155 | MS.gene028012:intron | 30.0% | |
| TGAAATTAGGGAAATATTCG+AGG | - | chr5.3:17395547-17395566 | MS.gene028012:intron | 30.0% | |
| TGATTAGATAAGCAATTACC+CGG | + | chr5.3:17397772-17397791 | None:intergenic | 30.0% | |
| TTCAAGATATTTAGGAACTG+TGG | + | chr5.3:17396722-17396741 | None:intergenic | 30.0% | |
| TTCTTCTTCTTGGAATTCAA+GGG | - | chr5.3:17396761-17396780 | MS.gene028012:intron | 30.0% | |
| TTTATTTGTAATCAGAGAGC+AGG | - | chr5.3:17396105-17396124 | MS.gene028012:intron | 30.0% | |
| TTTGAACTAATGATTCTGTC+AGG | + | chr5.3:17396173-17396192 | None:intergenic | 30.0% | |
| TTTGTTCCCGTACAAAAATT+TGG | + | chr5.3:17397016-17397035 | None:intergenic | 30.0% | |
| ! | AACTTTTTGTTGCACAAGTT+AGG | - | chr5.3:17398980-17398999 | MS.gene028012:CDS | 30.0% |
| ! | AAGCTCATCTTTTCTTTTGA+AGG | + | chr5.3:17397714-17397733 | None:intergenic | 30.0% |
| ! | AATGTTTTCATTTTCAGCCT+TGG | - | chr5.3:17398208-17398227 | MS.gene028012:intron | 30.0% |
| ! | ACTATGAATATAGATTCGGT+AGG | - | chr5.3:17397406-17397425 | MS.gene028012:intron | 30.0% |
| ! | ACTTTTTGTTGCACAAGTTA+GGG | - | chr5.3:17398981-17399000 | MS.gene028012:CDS | 30.0% |
| ! | ATGTTTTCATTTTCAGCCTT+GGG | - | chr5.3:17398209-17398228 | MS.gene028012:intron | 30.0% |
| ! | GCCGAAATATGATAATGATA+AGG | + | chr5.3:17396384-17396403 | None:intergenic | 30.0% |
| ! | TTACGAATTTTTCTCATGAC+AGG | - | chr5.3:17396609-17396628 | MS.gene028012:intron | 30.0% |
| ! | TTTGTTATAGGTGTGGTAAA+GGG | - | chr5.3:17395385-17395404 | MS.gene028012:CDS | 30.0% |
| !! | ATAAGAGTTTGTTATAGGTG+TGG | - | chr5.3:17395378-17395397 | MS.gene028012:CDS | 30.0% |
| !! | ATAATTTGCTTAACTTCCAG+AGG | + | chr5.3:17395594-17395613 | None:intergenic | 30.0% |
| !! | CTGTAATTTTAAGAAGACTC+CGG | + | chr5.3:17397804-17397823 | None:intergenic | 30.0% |
| !! | TGCTTTGAATCATCTTGTTT+TGG | + | chr5.3:17398720-17398739 | None:intergenic | 30.0% |
| AACACTGAGGTTTACATCAA+TGG | - | chr5.3:17396236-17396255 | MS.gene028012:intron | 35.0% | |
| ACAGATGCTATAATTAGGGA+TGG | - | chr5.3:17397875-17397894 | MS.gene028012:intron | 35.0% | |
| AGTTCTGCTATAGTCTCTAT+TGG | + | chr5.3:17396011-17396030 | None:intergenic | 35.0% | |
| CAAATTTACTGATCAAGAGC+TGG | - | chr5.3:17397032-17397051 | MS.gene028012:intron | 35.0% | |
| CAATATGCTTACTTGGTCAT+TGG | + | chr5.3:17398450-17398469 | None:intergenic | 35.0% | |
| CATGTTTCGAATGCATGTTT+AGG | + | chr5.3:17397327-17397346 | None:intergenic | 35.0% | |
| CTGTATAAGCTTCGAACTTT+GGG | + | chr5.3:17398404-17398423 | None:intergenic | 35.0% | |
| CTTAATGGGAAAAAATGGTG+CGG | + | chr5.3:17398509-17398528 | None:intergenic | 35.0% | |
| CTTCTTCTTCTTGGAATTCA+AGG | - | chr5.3:17396760-17396779 | MS.gene028012:intron | 35.0% | |
| GATGCATAGCCAATAAACTT+AGG | + | chr5.3:17398159-17398178 | None:intergenic | 35.0% | |
| GGTGTTAATGTTAATTCTGC+GGG | - | chr5.3:17397427-17397446 | MS.gene028012:intron | 35.0% | |
| TATAGTATGTCCCTTTCAGA+AGG | + | chr5.3:17398318-17398337 | None:intergenic | 35.0% | |
| TATCTAATCATCCTCGAAAC+CGG | - | chr5.3:17397782-17397801 | MS.gene028012:CDS | 35.0% | |
| TATTGGTACGACAAAGAATC+TGG | - | chr5.3:17395750-17395769 | MS.gene028012:intron | 35.0% | |
| TCTGTATAAGCTTCGAACTT+TGG | + | chr5.3:17398405-17398424 | None:intergenic | 35.0% | |
| TCTTCGAGGAAAAAATGAGA+AGG | - | chr5.3:17398818-17398837 | MS.gene028012:CDS | 35.0% | |
| TTCGGTACTTCATAAGAAAC+CGG | + | chr5.3:17395003-17395022 | None:intergenic | 35.0% | |
| ! | AATCCAAGCGTCTGAAATTA+GGG | - | chr5.3:17395535-17395554 | MS.gene028012:intron | 35.0% |
| ! | TGCTTTCATTTTCGCATGTA+TGG | - | chr5.3:17395821-17395840 | MS.gene028012:intron | 35.0% |
| ! | TGTTTTCATTTTCAGCCTTG+GGG | - | chr5.3:17398210-17398229 | MS.gene028012:intron | 35.0% |
| !! | AAAGGAGTGTCTTTGAAACA+AGG | + | chr5.3:17398772-17398791 | None:intergenic | 35.0% |
| !! | AAGGAGTGTCTTTGAAACAA+GGG | + | chr5.3:17398771-17398790 | None:intergenic | 35.0% |
| !! | GTTTCTAGAATGAATGGACA+AGG | - | chr5.3:17397141-17397160 | MS.gene028012:intron | 35.0% |
| !! | GTTTGTTATAGGTGTGGTAA+AGG | - | chr5.3:17395384-17395403 | MS.gene028012:CDS | 35.0% |
| !!! | AATGTGCTCGCTTTTTTTTC+AGG | - | chr5.3:17398263-17398282 | MS.gene028012:CDS | 35.0% |
| !!! | CACTTTTGGGTTTATGATGA+TGG | - | chr5.3:17396477-17396496 | MS.gene028012:CDS | 35.0% |
| AAATACGTGACATCGGCAAA+GGG | + | chr5.3:17395068-17395087 | None:intergenic | 40.0% | |
| AAATTACTATGGTCCACCTG+AGG | - | chr5.3:17399080-17399099 | MS.gene028012:CDS | 40.0% | |
| AACTAGCACCATGTTTAAGC+AGG | - | chr5.3:17396789-17396808 | MS.gene028012:intron | 40.0% | |
| AAGAGGAAACATTTGGGAGA+AGG | - | chr5.3:17396530-17396549 | MS.gene028012:intron | 40.0% | |
| AAGCCATACCTGCTTAAACA+TGG | + | chr5.3:17396800-17396819 | None:intergenic | 40.0% | |
| AAGCTTGATGTGCTAGTGAT+TGG | + | chr5.3:17398906-17398925 | None:intergenic | 40.0% | |
| ACATCTAGAGGCTCAACTTT+CGG | + | chr5.3:17395021-17395040 | None:intergenic | 40.0% | |
| ACGACAAAGAATCTGGTCTA+TGG | - | chr5.3:17395757-17395776 | MS.gene028012:intron | 40.0% | |
| ACGACTATGAACCTTCTGAA+AGG | - | chr5.3:17398304-17398323 | MS.gene028012:CDS | 40.0% | |
| ACTCAGAAGCTTCTTCTTCT+TGG | - | chr5.3:17396751-17396770 | MS.gene028012:intron | 40.0% | |
| AGGGACATACTATATGCAGA+AGG | - | chr5.3:17398324-17398343 | MS.gene028012:CDS | 40.0% | |
| AGTAAGTCTTCCATCTCATC+AGG | + | chr5.3:17395690-17395709 | None:intergenic | 40.0% | |
| ATAACTGATCGTAGTCGCTT+AGG | + | chr5.3:17398660-17398679 | None:intergenic | 40.0% | |
| ATCTCAGGTACCAACTCATA+AGG | - | chr5.3:17398554-17398573 | MS.gene028012:CDS | 40.0% | |
| ATTTACTGATCAAGAGCTGG+AGG | - | chr5.3:17397035-17397054 | MS.gene028012:intron | 40.0% | |
| CGACAAAGAATCTGGTCTAT+GGG | - | chr5.3:17395758-17395777 | MS.gene028012:intron | 40.0% | |
| CGCAAATGTGTAACATGCAT+CGG | - | chr5.3:17395498-17395517 | MS.gene028012:intron | 40.0% | |
| GAAAGCGGAGAAAGAATGTT+CGG | - | chr5.3:17395614-17395633 | MS.gene028012:CDS | 40.0% | |
| GACAAAGAATCTGGTCTATG+GGG | - | chr5.3:17395759-17395778 | MS.gene028012:intron | 40.0% | |
| GATGAGATGGAAGACTTACT+TGG | - | chr5.3:17395690-17395709 | MS.gene028012:CDS | 40.0% | |
| GGACATACTATATGCAGAAG+GGG | - | chr5.3:17398326-17398345 | MS.gene028012:CDS | 40.0% | |
| GGGACATACTATATGCAGAA+GGG | - | chr5.3:17398325-17398344 | MS.gene028012:CDS | 40.0% | |
| GTCTCCTAATCATAGTCCAA+GGG | - | chr5.3:17395101-17395120 | MS.gene028012:CDS | 40.0% | |
| GTTTGAAGATGTTAGAGCAG+TGG | - | chr5.3:17398621-17398640 | MS.gene028012:CDS | 40.0% | |
| TAACAAATACGACGTCTTCG+AGG | - | chr5.3:17398804-17398823 | MS.gene028012:CDS | 40.0% | |
| TAACTGATCGTAGTCGCTTA+GGG | + | chr5.3:17398659-17398678 | None:intergenic | 40.0% | |
| TATAATGTCCAGGAGCCAAT+CGG | + | chr5.3:17397597-17397616 | None:intergenic | 40.0% | |
| TCAATACCTTAATCTCCCCA+AGG | + | chr5.3:17398228-17398247 | None:intergenic | 40.0% | |
| TCGACAGCTTCGGAATATTT+AGG | - | chr5.3:17394973-17394992 | MS.gene028012:CDS | 40.0% | |
| TCTATAAGCTATACTGGAGC+TGG | + | chr5.3:17398019-17398038 | None:intergenic | 40.0% | |
| TCTCAGGTACCAACTCATAA+GGG | - | chr5.3:17398555-17398574 | MS.gene028012:CDS | 40.0% | |
| TCTGTAATTGAATCCTCAGG+TGG | + | chr5.3:17399096-17399115 | None:intergenic | 40.0% | |
| TCTTGATTACTCGACAGCTT+CGG | - | chr5.3:17394963-17394982 | MS.gene028012:CDS | 40.0% | |
| TGATCTTATGATTGCTGAGC+AGG | - | chr5.3:17396990-17397009 | MS.gene028012:CDS | 40.0% | |
| TTATTCAGGTAGCAATGGTG+AGG | - | chr5.3:17397517-17397536 | MS.gene028012:CDS | 40.0% | |
| TTCGGAATATTTAGGTCCAC+CGG | - | chr5.3:17394981-17395000 | MS.gene028012:CDS | 40.0% | |
| TTCGGCATCATTGAACTCAA+TGG | - | chr5.3:17396398-17396417 | MS.gene028012:CDS | 40.0% | |
| TTCTAAGCCGGTGATTAATG+AGG | - | chr5.3:17395230-17395249 | MS.gene028012:CDS | 40.0% | |
| TTGTCGTACCAATATCTACC+AGG | + | chr5.3:17395744-17395763 | None:intergenic | 40.0% | |
| TTTCCCTAATTTCAGACGCT+TGG | + | chr5.3:17395541-17395560 | None:intergenic | 40.0% | |
| TTTCCTCTGAGTCCTTTCAA+CGG | + | chr5.3:17395286-17395305 | None:intergenic | 40.0% | |
| ! | AGCAGGCCAAATTTTTGTAC+GGG | - | chr5.3:17397007-17397026 | MS.gene028012:intron | 40.0% |
| ! | CAAGGAGCTTTTCGAAACAA+TGG | - | chr5.3:17398738-17398757 | MS.gene028012:CDS | 40.0% |
| ! | CGACTATGAACCTTCTGAAA+GGG | - | chr5.3:17398305-17398324 | MS.gene028012:CDS | 40.0% |
| ! | GAATCCAAGCGTCTGAAATT+AGG | - | chr5.3:17395534-17395553 | MS.gene028012:intron | 40.0% |
| ! | GAGCAGGCCAAATTTTTGTA+CGG | - | chr5.3:17397006-17397025 | MS.gene028012:intron | 40.0% |
| ! | GGTTTCTGTGTTACTAAACC+CGG | - | chr5.3:17395146-17395165 | MS.gene028012:CDS | 40.0% |
| ! | TCGAATGCATGTTTAGGGTT+AGG | + | chr5.3:17397321-17397340 | None:intergenic | 40.0% |
| ! | TTCGAATGTTGCTTCTAAGC+CGG | - | chr5.3:17395218-17395237 | MS.gene028012:CDS | 40.0% |
| !! | CTTAGCACTGATGCTAGTAA+CGG | - | chr5.3:17396212-17396231 | MS.gene028012:intron | 40.0% |
| !! | GAGGCTGTTTCTAGAATGAA+TGG | - | chr5.3:17397135-17397154 | MS.gene028012:intron | 40.0% |
| !! | TCAAGATTAGAAGCGTCATC+AGG | + | chr5.3:17394949-17394968 | None:intergenic | 40.0% |
| !! | TCCACGTGATACTCACTTTT+GGG | - | chr5.3:17396464-17396483 | MS.gene028012:CDS | 40.0% |
| !! | TTAGCACTGATGCTAGTAAC+GGG | - | chr5.3:17396213-17396232 | MS.gene028012:intron | 40.0% |
| !! | TTATGATGATGGTCGTTACG+AGG | - | chr5.3:17396488-17396507 | MS.gene028012:intron | 40.0% |
| !! | TTCCTGTGATGGATGCATAA+AGG | + | chr5.3:17398957-17398976 | None:intergenic | 40.0% |
| ACACCGGAAATACGTGACAT+CGG | + | chr5.3:17395075-17395094 | None:intergenic | 45.0% | |
| ACCCAAAAGTGAGTATCACG+TGG | + | chr5.3:17396468-17396487 | None:intergenic | 45.0% | |
| ACTCATAAGGGTGAATGCCA+AGG | - | chr5.3:17398567-17398586 | MS.gene028012:CDS | 45.0% | |
| AGAATCTGGTCTATGGGGAA+AGG | - | chr5.3:17395764-17395783 | MS.gene028012:intron | 45.0% | |
| AGACGCTTGGATTCGTCAAT+AGG | + | chr5.3:17395528-17395547 | None:intergenic | 45.0% | |
| AGCTGAAGCCTGGTAGATAT+TGG | - | chr5.3:17395733-17395752 | MS.gene028012:intron | 45.0% | |
| AGCTTCCATAATGTGAGCAG+GGG | + | chr5.3:17397169-17397188 | None:intergenic | 45.0% | |
| AGGAGATAATTGGAGGGAAG+TGG | - | chr5.3:17394891-17394910 | MS.gene028012:CDS | 45.0% | |
| AGGATAGGGTAGAGAGAAGA+GGG | + | chr5.3:17396656-17396675 | None:intergenic | 45.0% | |
| ATACCGTTGAAAGGACTCAG+AGG | - | chr5.3:17395280-17395299 | MS.gene028012:CDS | 45.0% | |
| ATAGGTGTGGTAAAGGGAAG+TGG | - | chr5.3:17395391-17395410 | MS.gene028012:CDS | 45.0% | |
| ATATGCAGAAGGGGTTACTC+AGG | - | chr5.3:17398335-17398354 | MS.gene028012:CDS | 45.0% | |
| CAGCTTCCATAATGTGAGCA+GGG | + | chr5.3:17397170-17397189 | None:intergenic | 45.0% | |
| CCTCTAGATGTGAAGTTCAG+AGG | - | chr5.3:17395030-17395049 | MS.gene028012:CDS | 45.0% | |
| CCTCTGAACTTCACATCTAG+AGG | + | chr5.3:17395033-17395052 | None:intergenic | 45.0% | |
| CGGAAAAATGCTTCAGCCTT+GGG | + | chr5.3:17397577-17397596 | None:intergenic | 45.0% | |
| CTAAACCCGGATCTTTCTTC+TGG | - | chr5.3:17395159-17395178 | MS.gene028012:CDS | 45.0% | |
| CTCATAAGGGTGAATGCCAA+GGG | - | chr5.3:17398568-17398587 | MS.gene028012:CDS | 45.0% | |
| CTCTTCGCCTCATTAATCAC+CGG | + | chr5.3:17395240-17395259 | None:intergenic | 45.0% | |
| CTTCCATCTCATCAGGTTTG+AGG | + | chr5.3:17395683-17395702 | None:intergenic | 45.0% | |
| CTTCTTGGAATTCAAGGGTC+TGG | - | chr5.3:17396766-17396785 | MS.gene028012:intron | 45.0% | |
| GAAATACGTGACATCGGCAA+AGG | + | chr5.3:17395069-17395088 | None:intergenic | 45.0% | |
| GAAGGATTATGAACCGAAGC+CGG | + | chr5.3:17395201-17395220 | None:intergenic | 45.0% | |
| GAATGCATCTAAATCCCCAG+TGG | + | chr5.3:17397621-17397640 | None:intergenic | 45.0% | |
| GACACCCTTGGACTATGATT+AGG | + | chr5.3:17395108-17395127 | None:intergenic | 45.0% | |
| GACCTTTATGCATCCATCAC+AGG | - | chr5.3:17398952-17398971 | MS.gene028012:CDS | 45.0% | |
| GCACCATGTTTAAGCAGGTA+TGG | - | chr5.3:17396794-17396813 | MS.gene028012:intron | 45.0% | |
| GCATCTATTCTCTCAACCCA+AGG | - | chr5.3:17397558-17397577 | MS.gene028012:CDS | 45.0% | |
| GGCTTAGAAGCAACATTCGA+AGG | + | chr5.3:17395219-17395238 | None:intergenic | 45.0% | |
| GGTACTTCATAAGAAACCGG+TGG | + | chr5.3:17395000-17395019 | None:intergenic | 45.0% | |
| GGTCTCCTAATCATAGTCCA+AGG | - | chr5.3:17395100-17395119 | MS.gene028012:CDS | 45.0% | |
| GGTTACTCAGGGAAATGGTT+TGG | - | chr5.3:17398347-17398366 | MS.gene028012:CDS | 45.0% | |
| GTCTGGAAGTTCAGAATCTG+TGG | - | chr5.3:17395125-17395144 | MS.gene028012:CDS | 45.0% | |
| TAGGTGTGGTAAAGGGAAGT+GGG | - | chr5.3:17395392-17395411 | MS.gene028012:CDS | 45.0% | |
| TATCCCTCAACGCTTGTGAA+TGG | - | chr5.3:17398842-17398861 | MS.gene028012:CDS | 45.0% | |
| TATCTTGCACCAGACAGCAA+TGG | - | chr5.3:17398679-17398698 | MS.gene028012:CDS | 45.0% | |
| TATGCAGAAGGGGTTACTCA+GGG | - | chr5.3:17398336-17398355 | MS.gene028012:CDS | 45.0% | |
| TCACTTCCTTCCAGATGTTG+CGG | - | chr5.3:17397733-17397752 | MS.gene028012:CDS | 45.0% | |
| TCCTGGACATTATAGCCACT+GGG | - | chr5.3:17397603-17397622 | MS.gene028012:intron | 45.0% | |
| TCGAAACATGCATGCGTACA+TGG | - | chr5.3:17397337-17397356 | MS.gene028012:CDS | 45.0% | |
| TCGGAAAAATGCTTCAGCCT+TGG | + | chr5.3:17397578-17397597 | None:intergenic | 45.0% | |
| TCTCCTCAAACCTGATGAGA+TGG | - | chr5.3:17395677-17395696 | MS.gene028012:CDS | 45.0% | |
| TGAAAGGACTCAGAGGAAAG+AGG | - | chr5.3:17395287-17395306 | MS.gene028012:CDS | 45.0% | |
| TGGCATTCACCCTTATGAGT+TGG | + | chr5.3:17398567-17398586 | None:intergenic | 45.0% | |
| TGTTGCACAAGTTAGGGCAA+GGG | - | chr5.3:17398987-17399006 | MS.gene028012:CDS | 45.0% | |
| TTAAGAAGACTCCGGTTTCG+AGG | + | chr5.3:17397796-17397815 | None:intergenic | 45.0% | |
| TTCACAACTCCAACGTACTC+CGG | + | chr5.3:17395339-17395358 | None:intergenic | 45.0% | |
| TTCCACACTTCTTCGACTAG+TGG | + | chr5.3:17397671-17397690 | None:intergenic | 45.0% | |
| TTCTCTCTACCCTATCCTCA+TGG | - | chr5.3:17396658-17396677 | MS.gene028012:intron | 45.0% | |
| TTGAAGGTCACTTGTATCGC+TGG | + | chr5.3:17397698-17397717 | None:intergenic | 45.0% | |
| TTGCCGATGTCACGTATTTC+CGG | - | chr5.3:17395069-17395088 | MS.gene028012:CDS | 45.0% | |
| TTGGTTGCAACTGAGCATCA+AGG | + | chr5.3:17398431-17398450 | None:intergenic | 45.0% | |
| TTGTTGCACAAGTTAGGGCA+AGG | - | chr5.3:17398986-17399005 | MS.gene028012:CDS | 45.0% | |
| TTTCAGCCTTGGGGAGATTA+AGG | - | chr5.3:17398219-17398238 | MS.gene028012:intron | 45.0% | |
| ! | GTCCACGTGATACTCACTTT+TGG | - | chr5.3:17396463-17396482 | MS.gene028012:CDS | 45.0% |
| ! | TGAACCATTCACAAGCGTTG+AGG | + | chr5.3:17398849-17398868 | None:intergenic | 45.0% |
| ! | TTGCGGAGTACTTCTTAAGC+CGG | - | chr5.3:17397750-17397769 | MS.gene028012:CDS | 45.0% |
| !! | AACTCGAATTGAGGGTACTC+AGG | - | chr5.3:17396273-17396292 | MS.gene028012:CDS | 45.0% |
| !! | AAGAAGTACTCCGCAACATC+TGG | + | chr5.3:17397746-17397765 | None:intergenic | 45.0% |
| !! | AATCATAGTCCAAGGGTGTC+TGG | - | chr5.3:17395108-17395127 | MS.gene028012:CDS | 45.0% |
| !! | ACTCGAATTGAGGGTACTCA+GGG | - | chr5.3:17396274-17396293 | MS.gene028012:CDS | 45.0% |
| !! | GAACCATTCACAAGCGTTGA+GGG | + | chr5.3:17398848-17398867 | None:intergenic | 45.0% |
| !! | GGCTGAAGCATTTTTCCGAT+TGG | - | chr5.3:17397579-17397598 | MS.gene028012:intron | 45.0% |
| !! | GGGAAATGGTTTGGCTTTCA+TGG | - | chr5.3:17398356-17398375 | MS.gene028012:CDS | 45.0% |
| !!! | AAGAGAGCGTTTTGAAGAGG+AGG | - | chr5.3:17397116-17397135 | MS.gene028012:intron | 45.0% |
| !!! | TGGAAGAGAGCGTTTTGAAG+AGG | - | chr5.3:17397113-17397132 | MS.gene028012:intron | 45.0% |
| AAGGACTCAGAGGAAAGAGG+TGG | - | chr5.3:17395290-17395309 | MS.gene028012:CDS | 50.0% | |
| AGGTTCCCCTGCTCACATTA+TGG | - | chr5.3:17397161-17397180 | MS.gene028012:intron | 50.0% | |
| AGTACTCCGCAACATCTGGA+AGG | + | chr5.3:17397742-17397761 | None:intergenic | 50.0% | |
| ATGAGGCTGTCCATGAGGAT+AGG | + | chr5.3:17396671-17396690 | None:intergenic | 50.0% | |
| CACCACTAGTCGAAGAAGTG+TGG | - | chr5.3:17397666-17397685 | MS.gene028012:intron | 50.0% | |
| CATGAGCGAAGGTTGCAAGT+GGG | - | chr5.3:17398591-17398610 | MS.gene028012:CDS | 50.0% | |
| CCAGAGCAGTTGAGTGTCAA+CGG | - | chr5.3:17395651-17395670 | MS.gene028012:CDS | 50.0% | |
| CCAGCTTCCATAATGTGAGC+AGG | + | chr5.3:17397171-17397190 | None:intergenic | 50.0% | |
| CCTGCTCACATTATGGAAGC+TGG | - | chr5.3:17397168-17397187 | MS.gene028012:intron | 50.0% | |
| CCTGGACATTATAGCCACTG+GGG | - | chr5.3:17397604-17397623 | MS.gene028012:intron | 50.0% | |
| CGATGGGATCAATGCCTGAA+GGG | - | chr5.3:17395475-17395494 | MS.gene028012:intron | 50.0% | |
| CGGTGATTAATGAGGCGAAG+AGG | - | chr5.3:17395238-17395257 | MS.gene028012:CDS | 50.0% | |
| CTCCTGGACATTATAGCCAC+TGG | - | chr5.3:17397602-17397621 | MS.gene028012:intron | 50.0% | |
| CTTCCAGAGGACTCAACAGT+CGG | + | chr5.3:17395581-17395600 | None:intergenic | 50.0% | |
| GAAGGGGTTACTCAGGGAAA+TGG | - | chr5.3:17398342-17398361 | MS.gene028012:CDS | 50.0% | |
| GAGGATAGGGTAGAGAGAAG+AGG | + | chr5.3:17396657-17396676 | None:intergenic | 50.0% | |
| GCGAACCAGAAGAAAGATCC+GGG | + | chr5.3:17395167-17395186 | None:intergenic | 50.0% | |
| GCTTGGATTCGTCAATAGGC+TGG | + | chr5.3:17395524-17395543 | None:intergenic | 50.0% | |
| GGCGAACCAGAAGAAAGATC+CGG | + | chr5.3:17395168-17395187 | None:intergenic | 50.0% | |
| GTCACGTATTTCCGGTGTGA+CGG | - | chr5.3:17395077-17395096 | MS.gene028012:CDS | 50.0% | |
| GTTACACATTTGCGCCCTTC+AGG | + | chr5.3:17395492-17395511 | None:intergenic | 50.0% | |
| TATCCTCATGGACAGCCTCA+TGG | - | chr5.3:17396670-17396689 | MS.gene028012:intron | 50.0% | |
| TCACGTATTTCCGGTGTGAC+GGG | - | chr5.3:17395078-17395097 | MS.gene028012:CDS | 50.0% | |
| TCTGAACTTCCAGACACCCT+TGG | + | chr5.3:17395120-17395139 | None:intergenic | 50.0% | |
| TGAGGCTGTCCATGAGGATA+GGG | + | chr5.3:17396670-17396689 | None:intergenic | 50.0% | |
| TTCAGCTTGCGTGGAGGTAA+GGG | + | chr5.3:17395720-17395739 | None:intergenic | 50.0% | |
| TTCCAGAGGACTCAACAGTC+GGG | + | chr5.3:17395580-17395599 | None:intergenic | 50.0% | |
| ! | CATATTCACGTGTCGCTGCA+GGG | + | chr5.3:17397646-17397665 | None:intergenic | 50.0% |
| ! | TGCGGAGTACTTCTTAAGCC+GGG | - | chr5.3:17397751-17397770 | MS.gene028012:CDS | 50.0% |
| ! | TGCTAGTAACGGGAACACTG+AGG | - | chr5.3:17396223-17396242 | MS.gene028012:intron | 50.0% |
| !! | GCATTTTTCCGATTGGCTCC+TGG | - | chr5.3:17397586-17397605 | MS.gene028012:intron | 50.0% |
| !! | TCATCAGGAACAGAAGCACC+CGG | + | chr5.3:17394934-17394953 | None:intergenic | 50.0% |
| !! | TGATGATGGTCGTTACGAGG+AGG | - | chr5.3:17396491-17396510 | MS.gene028012:intron | 50.0% |
| ATACTGGAGCTGGCGAGCTT+AGG | + | chr5.3:17398009-17398028 | None:intergenic | 55.0% | |
| ATCCCGACTGTTGAGTCCTC+TGG | - | chr5.3:17395575-17395594 | MS.gene028012:CDS | 55.0% | |
| ATTAGGAGACCCCGTCACAC+CGG | + | chr5.3:17395091-17395110 | None:intergenic | 55.0% | |
| ATTGCAGCAGCTGTGTGCTC+AGG | - | chr5.3:17395451-17395470 | MS.gene028012:intron | 55.0% | |
| CACGTATTTCCGGTGTGACG+GGG | - | chr5.3:17395079-17395098 | MS.gene028012:CDS | 55.0% | |
| CCCCAGTGGCTATAATGTCC+AGG | + | chr5.3:17397607-17397626 | None:intergenic | 55.0% | |
| CCGTTGACACTCAACTGCTC+TGG | + | chr5.3:17395654-17395673 | None:intergenic | 55.0% | |
| CTTCAGCTTGCGTGGAGGTA+AGG | + | chr5.3:17395721-17395740 | None:intergenic | 55.0% | |
| GACTCAGAGGAAAGAGGTGG+TGG | - | chr5.3:17395293-17395312 | MS.gene028012:CDS | 55.0% | |
| GATCCATGAGGCTGTCCATG+AGG | + | chr5.3:17396676-17396695 | None:intergenic | 55.0% | |
| GATGGTCGTTACGAGGAGGA+AGG | - | chr5.3:17396495-17396514 | MS.gene028012:intron | 55.0% | |
| GCATGAGCGAAGGTTGCAAG+TGG | - | chr5.3:17398590-17398609 | MS.gene028012:CDS | 55.0% | |
| GCCTCATGGATCAAGAGACG+AGG | - | chr5.3:17396684-17396703 | MS.gene028012:intron | 55.0% | |
| GCCTCGTCTCTTGATCCATG+AGG | + | chr5.3:17396688-17396707 | None:intergenic | 55.0% | |
| GCGATGGGATCAATGCCTGA+AGG | - | chr5.3:17395474-17395493 | MS.gene028012:intron | 55.0% | |
| GGTGAAGAAGATGCTTCCGC+CGG | - | chr5.3:17394912-17394931 | MS.gene028012:CDS | 55.0% | |
| GTGAAGAAGATGCTTCCGCC+GGG | - | chr5.3:17394913-17394932 | MS.gene028012:CDS | 55.0% | |
| GTTGTTGTCGTGTGCGCGAA+CGG | + | chr5.3:17398884-17398903 | None:intergenic | 55.0% | |
| TGGTTCGCCTTCAGCTTCAC+CGG | - | chr5.3:17395179-17395198 | MS.gene028012:CDS | 55.0% | |
| TTGCAGCAGCTGTGTGCTCA+GGG | - | chr5.3:17395452-17395471 | MS.gene028012:intron | 55.0% | |
| TTGTTGTCGTGTGCGCGAAC+GGG | + | chr5.3:17398883-17398902 | None:intergenic | 55.0% | |
| ! | AATGCCAAGGGCATGAGCGA+AGG | - | chr5.3:17398580-17398599 | MS.gene028012:CDS | 55.0% |
| ! | GCATATTCACGTGTCGCTGC+AGG | + | chr5.3:17397647-17397666 | None:intergenic | 55.0% |
| ! | TCAGAGGAAAGAGGTGGTGG+AGG | - | chr5.3:17395296-17395315 | MS.gene028012:CDS | 55.0% |
| ACCGAAGCCGGTGAAGCTGA+AGG | + | chr5.3:17395189-17395208 | None:intergenic | 60.0% | |
| AGCTGTGTGCTCAGGGCGAT+GGG | - | chr5.3:17395459-17395478 | MS.gene028012:intron | 60.0% | |
| CCAACGTACTCCGGATACGC+CGG | + | chr5.3:17395330-17395349 | None:intergenic | 60.0% | |
| CTACCAGGCTTCAGCTTGCG+TGG | + | chr5.3:17395729-17395748 | None:intergenic | 60.0% | |
| GCAACCTTCGCTCATGCCCT+TGG | + | chr5.3:17398587-17398606 | None:intergenic | 60.0% | |
| GCACCAGACAGCAATGGCAG+CGG | - | chr5.3:17398685-17398704 | MS.gene028012:CDS | 60.0% | |
| GGTTGTGAAGCCGGCGTATC+CGG | - | chr5.3:17395317-17395336 | MS.gene028012:CDS | 60.0% | |
| GTTCCGCTGCCATTGCTGTC+TGG | + | chr5.3:17398691-17398710 | None:intergenic | 60.0% | |
| !! | GCCTTCAGCTTCACCGGCTT+CGG | - | chr5.3:17395185-17395204 | MS.gene028012:CDS | 60.0% |
| !! | GGTGGTGGAGGTTGTGAAGC+CGG | - | chr5.3:17395308-17395327 | MS.gene028012:CDS | 60.0% |
| !! | TCAGGAACAGAAGCACCCGG+CGG | + | chr5.3:17394931-17394950 | None:intergenic | 60.0% |
| CAGCTGTGTGCTCAGGGCGA+TGG | - | chr5.3:17395458-17395477 | MS.gene028012:intron | 65.0% | |
| CCAGGCTTCAGCTTGCGTGG+AGG | + | chr5.3:17395726-17395745 | None:intergenic | 65.0% | |
| CCGGCGTATCCGGAGTACGT+TGG | - | chr5.3:17395327-17395346 | MS.gene028012:CDS | 65.0% | |
| CCTCCACGCAAGCTGAAGCC+TGG | - | chr5.3:17395723-17395742 | MS.gene028012:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 17394877 | 17399149 | 17394877 | ID=MS.gene028012 |
| chr5.3 | mRNA | 17394877 | 17399149 | 17394877 | ID=MS.gene028012.t1;Parent=MS.gene028012 |
| chr5.3 | exon | 17398241 | 17399149 | 17398241 | ID=MS.gene028012.t1.exon1;Parent=MS.gene028012.t1 |
| chr5.3 | CDS | 17398241 | 17399149 | 17398241 | ID=cds.MS.gene028012.t1;Parent=MS.gene028012.t1 |
| chr5.3 | exon | 17397731 | 17397868 | 17397731 | ID=MS.gene028012.t1.exon2;Parent=MS.gene028012.t1 |
| chr5.3 | CDS | 17397731 | 17397868 | 17397731 | ID=cds.MS.gene028012.t1;Parent=MS.gene028012.t1 |
| chr5.3 | exon | 17397475 | 17397579 | 17397475 | ID=MS.gene028012.t1.exon3;Parent=MS.gene028012.t1 |
| chr5.3 | CDS | 17397475 | 17397579 | 17397475 | ID=cds.MS.gene028012.t1;Parent=MS.gene028012.t1 |
| chr5.3 | exon | 17397216 | 17397395 | 17397216 | ID=MS.gene028012.t1.exon4;Parent=MS.gene028012.t1 |
| chr5.3 | CDS | 17397216 | 17397395 | 17397216 | ID=cds.MS.gene028012.t1;Parent=MS.gene028012.t1 |
| chr5.3 | exon | 17396837 | 17397014 | 17396837 | ID=MS.gene028012.t1.exon5;Parent=MS.gene028012.t1 |
| chr5.3 | CDS | 17396837 | 17397014 | 17396837 | ID=cds.MS.gene028012.t1;Parent=MS.gene028012.t1 |
| chr5.3 | exon | 17396254 | 17396501 | 17396254 | ID=MS.gene028012.t1.exon6;Parent=MS.gene028012.t1 |
| chr5.3 | CDS | 17396254 | 17396501 | 17396254 | ID=cds.MS.gene028012.t1;Parent=MS.gene028012.t1 |
| chr5.3 | exon | 17395569 | 17395741 | 17395569 | ID=MS.gene028012.t1.exon7;Parent=MS.gene028012.t1 |
| chr5.3 | CDS | 17395569 | 17395741 | 17395569 | ID=cds.MS.gene028012.t1;Parent=MS.gene028012.t1 |
| chr5.3 | exon | 17394877 | 17395465 | 17394877 | ID=MS.gene028012.t1.exon8;Parent=MS.gene028012.t1 |
| chr5.3 | CDS | 17394877 | 17395465 | 17394877 | ID=cds.MS.gene028012.t1;Parent=MS.gene028012.t1 |
| Gene Sequence |
| Protein sequence |
