Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029071.t1 | XP_003592786.2 | 97.9 | 438 | 9 | 0 | 1 | 438 | 1 | 438 | 2.30E-247 | 864.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029071.t1 | Q9SR06 | 70.0 | 443 | 128 | 3 | 1 | 438 | 1 | 443 | 3.2e-181 | 636.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029071.t1 | G7IF21 | 97.9 | 438 | 9 | 0 | 1 | 438 | 1 | 438 | 1.7e-247 | 864.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene029071 | MS.gene042025 | PPI |
| MS.gene029071 | MS.gene42910 | PPI |
| MS.gene029071 | MS.gene81197 | PPI |
| MS.gene029071 | MS.gene73008 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029071.t1 | MTR_1g116060 | 97.945 | 438 | 9 | 0 | 1 | 438 | 1 | 438 | 0.0 | 881 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029071.t1 | AT3G04680 | 69.977 | 443 | 128 | 3 | 1 | 438 | 1 | 443 | 0.0 | 649 |
| MS.gene029071.t1 | AT3G04680 | 69.977 | 443 | 128 | 3 | 1 | 438 | 1 | 443 | 0.0 | 649 |
| MS.gene029071.t1 | AT3G04680 | 69.977 | 443 | 128 | 3 | 1 | 438 | 1 | 443 | 0.0 | 649 |
| MS.gene029071.t1 | AT5G39930 | 53.444 | 421 | 191 | 3 | 17 | 435 | 4 | 421 | 3.97e-157 | 451 |
| MS.gene029071.t1 | AT5G11010 | 29.851 | 134 | 90 | 4 | 130 | 259 | 33 | 166 | 1.18e-12 | 68.9 |
| MS.gene029071.t1 | AT5G11010 | 29.851 | 134 | 90 | 4 | 130 | 259 | 33 | 166 | 1.51e-12 | 69.3 |
| MS.gene029071.t1 | AT5G11010 | 29.851 | 134 | 90 | 4 | 130 | 259 | 33 | 166 | 1.51e-12 | 69.3 |
| MS.gene029071.t1 | AT5G11010 | 29.851 | 134 | 90 | 4 | 130 | 259 | 33 | 166 | 1.51e-12 | 69.3 |
Find 130 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAAGCAAGTATTTAATTA+TGG | 0.144919 | 1.3:-79158215 | MS.gene029071:CDS |
| CTTCGTCTTCGACTCCTTAA+TGG | 0.169227 | 1.3:-79161807 | MS.gene029071:CDS |
| TACCCTTATCCTATTACTTC+TGG | 0.205288 | 1.3:+79160049 | None:intergenic |
| GACAATTAAGCAAGTGAAAT+TGG | 0.240765 | 1.3:-79161871 | MS.gene029071:CDS |
| GTTGTTGGACCTTCAGATTC+TGG | 0.241641 | 1.3:-79161037 | MS.gene029071:CDS |
| TCCTATTACTTCTGGACTTC+TGG | 0.246775 | 1.3:+79160057 | None:intergenic |
| GGAAAATTGAGCCAGATTTC+AGG | 0.267757 | 1.3:+79161753 | None:intergenic |
| ACCTTTGTTGACTTGGATAT+TGG | 0.269551 | 1.3:-79160956 | MS.gene029071:CDS |
| GGTGCAGGTCCCGCTGTTAC+TGG | 0.269582 | 1.3:-79161909 | MS.gene029071:CDS |
| AAATCTCAGCGTTTCCATTA+AGG | 0.272061 | 1.3:+79161793 | None:intergenic |
| CCACGCTCTGCCTTGCCAAT+TGG | 0.286604 | 1.3:-79159260 | MS.gene029071:CDS |
| CCAAGCAAGTATTTAATTAT+GGG | 0.286724 | 1.3:-79158214 | MS.gene029071:CDS |
| ATTCAAGGCTGATGTTGTTT+TGG | 0.292392 | 1.3:-79160356 | MS.gene029071:CDS |
| TCCGCGGTATAACCAGTTTC+AGG | 0.300467 | 1.3:+79161582 | None:intergenic |
| CAAGGAGCTCGCGGGGATAC+TGG | 0.343687 | 1.3:-79160634 | MS.gene029071:CDS |
| GTCAAGGATGCTTCTTAGTT+GGG | 0.351155 | 1.3:-79161002 | MS.gene029071:CDS |
| TTATGGTGCAGCAATGTTGC+CGG | 0.356449 | 1.3:-79158393 | MS.gene029071:intron |
| GGCCCTAGGGTGATTGTTGT+TGG | 0.362138 | 1.3:-79161052 | MS.gene029071:CDS |
| GGATCGATGGGCATTTCAAT+TGG | 0.380336 | 1.3:+79160893 | None:intergenic |
| TGTCAAGGATGCTTCTTAGT+TGG | 0.381883 | 1.3:-79161003 | MS.gene029071:CDS |
| CCGAGCTTCCACCTGAAATC+TGG | 0.383905 | 1.3:-79161764 | MS.gene029071:CDS |
| AGTTACGGCGAACTTGAGTC+TGG | 0.395870 | 1.3:+79161728 | None:intergenic |
| AATTTCACTTGCTTAATTGT+CGG | 0.397547 | 1.3:+79161873 | None:intergenic |
| TTTGCTCAGAGACGTGCTTA+AGG | 0.408263 | 1.3:-79160150 | MS.gene029071:CDS |
| AGTCCAGAAGTAATAGGATA+AGG | 0.412890 | 1.3:-79160052 | MS.gene029071:CDS |
| CAAGGGTCTATAACAATTCC+TGG | 0.414153 | 1.3:-79160932 | MS.gene029071:CDS |
| TCAAGTTTCAAGCCATGTTA+AGG | 0.417129 | 1.3:+79158189 | None:intergenic |
| TACCTTGAAATGATCTCATC+AGG | 0.434012 | 1.3:+79159143 | None:intergenic |
| TTGCTCAGAGACGTGCTTAA+GGG | 0.434050 | 1.3:-79160149 | MS.gene029071:CDS |
| ATTTGATTGGTCAGGGCCCT+AGG | 0.434217 | 1.3:-79161066 | MS.gene029071:intron |
| TAACACCATTCCAGCAGCTC+TGG | 0.437054 | 1.3:+79160584 | None:intergenic |
| GCCAGAAGTCCAGAAGTAAT+AGG | 0.441249 | 1.3:-79160058 | MS.gene029071:CDS |
| GTCCAGAAGTAATAGGATAA+GGG | 0.451342 | 1.3:-79160051 | MS.gene029071:intron |
| CCCATAATTAAATACTTGCT+TGG | 0.452098 | 1.3:+79158214 | None:intergenic |
| AATGATCTCATCAGGTTCCT+TGG | 0.459020 | 1.3:+79159151 | None:intergenic |
| AGTTTCACAACATCTACTTT+AGG | 0.461880 | 1.3:+79160122 | None:intergenic |
| GCATGCAATCCGTACATTCA+AGG | 0.462451 | 1.3:-79160371 | MS.gene029071:CDS |
| GACTTCTGGCGGAACTTCAC+AGG | 0.465905 | 1.3:+79160071 | None:intergenic |
| GCAGCAGGTTCTGCTCCAAT+TGG | 0.466934 | 1.3:+79159245 | None:intergenic |
| AATGCCGAGTCCAGAGCTGC+TGG | 0.468900 | 1.3:-79160594 | MS.gene029071:CDS |
| CAACATCAGCCTTGAATGTA+CGG | 0.471086 | 1.3:+79160362 | None:intergenic |
| GTATGGTGCTACCATTGAAA+TGG | 0.476019 | 1.3:-79161613 | MS.gene029071:CDS |
| AATACCATGGGATGGATAGA+AGG | 0.476207 | 1.3:-79160561 | MS.gene029071:CDS |
| GAAGCCCACCTTTGTTGACT+TGG | 0.477215 | 1.3:-79160963 | MS.gene029071:CDS |
| ATGGATGGTACTCCTGAAAC+TGG | 0.480202 | 1.3:-79161594 | MS.gene029071:CDS |
| AGGAGTACCATCCATTTCAA+TGG | 0.480948 | 1.3:+79161602 | None:intergenic |
| GTTGACTTGGATATTGGCCA+AGG | 0.482675 | 1.3:-79160950 | MS.gene029071:CDS |
| GGTCGGGTGGAGTTGTATCT+AGG | 0.483284 | 1.3:-79160094 | MS.gene029071:CDS |
| CAGGAATTGTTATAGACCCT+TGG | 0.485244 | 1.3:+79160933 | None:intergenic |
| TTTGTTTATCGAGTTGGTGG+TGG | 0.488527 | 1.3:-79159293 | MS.gene029071:CDS |
| AGATGACTCTGTATTATCTC+AGG | 0.490721 | 1.3:-79161378 | MS.gene029071:intron |
| GAGGAGAAAGATCATTTGTA+AGG | 0.495205 | 1.3:+79159345 | None:intergenic |
| ACATACCTTACACCATCTGC+TGG | 0.496857 | 1.3:-79158244 | MS.gene029071:CDS |
| TTAATGGCGTATGGCGGTGC+AGG | 0.497042 | 1.3:-79161924 | MS.gene029071:CDS |
| ATACTGGAGAGACAATTTGC+TGG | 0.500426 | 1.3:-79160618 | MS.gene029071:CDS |
| CTTGGAAGTTCTCCAGCAGA+TGG | 0.504121 | 1.3:+79158232 | None:intergenic |
| AATTGAAATGCCCATCGATC+CGG | 0.504848 | 1.3:-79160891 | MS.gene029071:CDS |
| GTTCTCCAGCAGATGGTGTA+AGG | 0.505096 | 1.3:+79158239 | None:intergenic |
| GACTTGTTTGTTTATCGAGT+TGG | 0.507232 | 1.3:-79159299 | MS.gene029071:CDS |
| TAACAGACATTGACATTCAG+AGG | 0.512887 | 1.3:-79158359 | MS.gene029071:intron |
| GTTGGGCAGCAAAACAAGGT+TGG | 0.516790 | 1.3:-79160985 | MS.gene029071:CDS |
| AAGGCAGAGCGTGGAGCTTG+TGG | 0.519634 | 1.3:+79159269 | None:intergenic |
| CCCTAGTCTTTAATGGCGTA+TGG | 0.520280 | 1.3:-79161933 | None:intergenic |
| AATTCCCTCCACCGGATCGA+TGG | 0.521049 | 1.3:+79160880 | None:intergenic |
| CTTAGTTGGGCAGCAAAACA+AGG | 0.522514 | 1.3:-79160989 | MS.gene029071:CDS |
| GTTGTGAAACTTCAGAGGTC+GGG | 0.523003 | 1.3:-79160110 | MS.gene029071:CDS |
| AAATTTGAAATATTAGAATG+AGG | 0.541936 | 1.3:+79159326 | None:intergenic |
| AACTGGTTATACCGCGGATG+AGG | 0.542046 | 1.3:-79161577 | MS.gene029071:intron |
| TCAAGAGGAATTCCCTCCAC+CGG | 0.542450 | 1.3:+79160872 | None:intergenic |
| TTGTTTGTTTATCGAGTTGG+TGG | 0.550368 | 1.3:-79159296 | MS.gene029071:CDS |
| ACATTTACATAACTAACCAT+TGG | 0.551977 | 1.3:+79161449 | None:intergenic |
| ATTCCCTCCACCGGATCGAT+GGG | 0.554654 | 1.3:+79160881 | None:intergenic |
| GTCTGTTACATAGATAAAGC+CGG | 0.555833 | 1.3:+79158374 | None:intergenic |
| TTGACTTGGATATTGGCCAA+GGG | 0.556103 | 1.3:-79160949 | MS.gene029071:CDS |
| CCAATTGGCAAGGCAGAGCG+TGG | 0.557049 | 1.3:+79159260 | None:intergenic |
| GTGCTTGTCAAGGAGCTCGC+GGG | 0.558666 | 1.3:-79160642 | MS.gene029071:CDS |
| ACTCTCGTTGGATCTGCAGC+AGG | 0.559383 | 1.3:+79159230 | None:intergenic |
| CGAGTCCAGAGCTGCTGGAA+TGG | 0.560247 | 1.3:-79160589 | MS.gene029071:CDS |
| AATGCCCATCGATCCGGTGG+AGG | 0.563074 | 1.3:-79160885 | MS.gene029071:CDS |
| CCTTGCTGTCTCATTTGCCA+AGG | 0.564042 | 1.3:-79159168 | MS.gene029071:CDS |
| TTCACAGCTACAACTCTCGT+TGG | 0.566936 | 1.3:+79159218 | None:intergenic |
| CACTCCTTCTATCCATCCCA+TGG | 0.569058 | 1.3:+79160557 | None:intergenic |
| GGAGTGGCAGCAATGCATCC+AGG | 0.569729 | 1.3:+79160914 | None:intergenic |
| TTTGATTGGTCAGGGCCCTA+GGG | 0.570927 | 1.3:-79161065 | MS.gene029071:intron |
| CCAGATTTCAGGTGGAAGCT+CGG | 0.573098 | 1.3:+79161764 | None:intergenic |
| TGTCCATAAAAGTAAACAAG+AGG | 0.573566 | 1.3:+79160845 | None:intergenic |
| TGTTGTGAAACTTCAGAGGT+CGG | 0.573910 | 1.3:-79160111 | MS.gene029071:CDS |
| AACCTGATGAGATCATTTCA+AGG | 0.575187 | 1.3:-79159145 | MS.gene029071:intron |
| TAATTATGGGAACCTTAACA+TGG | 0.575215 | 1.3:-79158201 | MS.gene029071:CDS |
| TTGTTTATCGAGTTGGTGGT+GGG | 0.575272 | 1.3:-79159292 | MS.gene029071:CDS |
| TCGAAGACGAAGAGGTGAGT+CGG | 0.575469 | 1.3:+79161818 | None:intergenic |
| GGTCCAACAACAATCACCCT+AGG | 0.575548 | 1.3:+79161049 | None:intergenic |
| ATGCCCATCGATCCGGTGGA+GGG | 0.575608 | 1.3:-79160884 | MS.gene029071:CDS |
| GCCAATATCCAAGTCAACAA+AGG | 0.588558 | 1.3:+79160955 | None:intergenic |
| TGGTGTTAAATACCATGGGA+TGG | 0.592447 | 1.3:-79160569 | MS.gene029071:CDS |
| AATATCCAAGTCAACAAAGG+TGG | 0.592672 | 1.3:+79160958 | None:intergenic |
| TGAAATGCCCATCGATCCGG+TGG | 0.592811 | 1.3:-79160888 | MS.gene029071:CDS |
| GAATTTGAACCAGTAACAGC+GGG | 0.608811 | 1.3:+79161900 | None:intergenic |
| CTGGAAAGACTACCTTGTCA+AGG | 0.612870 | 1.3:-79161018 | MS.gene029071:CDS |
| ATATCCAAGTCAACAAAGGT+GGG | 0.613831 | 1.3:+79160959 | None:intergenic |
| GTAGTCTTTCCAGAATCTGA+AGG | 0.614463 | 1.3:+79161028 | None:intergenic |
| AAATTGAGCCAGATTTCAGG+TGG | 0.615483 | 1.3:+79161756 | None:intergenic |
| ATTGTATAAAGTGCTTGTCA+AGG | 0.615803 | 1.3:-79160652 | MS.gene029071:CDS |
| GATAATACAGAGTCATCTGA+AGG | 0.618694 | 1.3:+79161383 | None:intergenic |
| GATGGGCATTTCAATTGGAG+TGG | 0.619367 | 1.3:+79160898 | None:intergenic |
| TAAACAAGAGGCATTTCAAG+AGG | 0.619620 | 1.3:+79160857 | None:intergenic |
| CATTCCAGCAGCTCTGGACT+CGG | 0.622880 | 1.3:+79160590 | None:intergenic |
| AGGTTCTGCTCCAATTGGCA+AGG | 0.623138 | 1.3:+79159250 | None:intergenic |
| GTTACGGCGAACTTGAGTCT+GGG | 0.624730 | 1.3:+79161729 | None:intergenic |
| TGCTTGTCAAGGAGCTCGCG+GGG | 0.630947 | 1.3:-79160641 | MS.gene029071:CDS |
| TATTACTTCTGGACTTCTGG+CGG | 0.638427 | 1.3:+79160060 | None:intergenic |
| GTGAAACTTCAGAGGTCGGG+TGG | 0.639286 | 1.3:-79160107 | MS.gene029071:CDS |
| CCTTGGCAAATGAGACAGCA+AGG | 0.641711 | 1.3:+79159168 | None:intergenic |
| ACTAAGAAGCATCCTTGACA+AGG | 0.644015 | 1.3:+79161006 | None:intergenic |
| TGGAATGGTGTTAAATACCA+TGG | 0.644511 | 1.3:-79160574 | MS.gene029071:CDS |
| CATGGGATGGATAGAAGGAG+TGG | 0.650431 | 1.3:-79160556 | MS.gene029071:CDS |
| TAGATGTTGTGAAACTTCAG+AGG | 0.652011 | 1.3:-79160115 | MS.gene029071:CDS |
| ATGAGACAGCAAGGACTGCG+TGG | 0.652105 | 1.3:+79159177 | None:intergenic |
| GGAATGGTGTTAAATACCAT+GGG | 0.654726 | 1.3:-79160573 | MS.gene029071:CDS |
| TTAAGGAGTCGAAGACGAAG+AGG | 0.656307 | 1.3:+79161810 | None:intergenic |
| GTCCAACAACAATCACCCTA+GGG | 0.657175 | 1.3:+79161050 | None:intergenic |
| GGTGCTACCATTGAAATGGA+TGG | 0.657214 | 1.3:-79161609 | MS.gene029071:CDS |
| AGTGCTTGTCAAGGAGCTCG+CGG | 0.657958 | 1.3:-79160643 | MS.gene029071:CDS |
| ATGGGATGGATAGAAGGAGT+GGG | 0.661981 | 1.3:-79160555 | MS.gene029071:CDS |
| TCCTGAAACTGGTTATACCG+CGG | 0.672527 | 1.3:-79161583 | MS.gene029071:CDS |
| CGAATTTGAACCAGTAACAG+CGG | 0.691935 | 1.3:+79161899 | None:intergenic |
| TAGTCTTTAATGGCGTATGG+CGG | 0.711686 | 1.3:-79161930 | None:intergenic |
| ACGGCGAACTTGAGTCTGGG+AGG | 0.717660 | 1.3:+79161732 | None:intergenic |
| TTTATGGACACACATCTCCG+AGG | 0.722635 | 1.3:-79160832 | MS.gene029071:intron |
| AAAGTGATTTACCTCATCCG+CGG | 0.723753 | 1.3:+79161566 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATAAAAATAATATAACTA+AGG | - | chr1.3:79161525-79161544 | MS.gene029071:intron | 10.0% |
| !! | CATCATTATTATTATTATTA+AGG | - | chr1.3:79158908-79158927 | MS.gene029071:intron | 10.0% |
| !!! | ATTTTTAAATGTTAGTTAAA+TGG | - | chr1.3:79160165-79160184 | MS.gene029071:CDS | 10.0% |
| !!! | TATTATAATTTTTGTAAACT+TGG | - | chr1.3:79159893-79159912 | MS.gene029071:intron | 10.0% |
| !!! | TTTTTAAATGTTAGTTAAAT+GGG | - | chr1.3:79160166-79160185 | MS.gene029071:CDS | 10.0% |
| !! | ACTGAAAAAAAAGAATTATT+TGG | + | chr1.3:79159427-79159446 | None:intergenic | 15.0% |
| !! | TAAATAGTTGAAAATATGAT+AGG | + | chr1.3:79159321-79159340 | None:intergenic | 15.0% |
| !! | TTAATTAGTTAAAAACAGTT+GGG | - | chr1.3:79161182-79161201 | MS.gene029071:intron | 15.0% |
| !!! | AAATTTGAAATATTAGAATG+AGG | + | chr1.3:79160787-79160806 | None:intergenic | 15.0% |
| !!! | TCATATTTTCAACTATTTAT+TGG | - | chr1.3:79159322-79159341 | MS.gene029071:CDS | 15.0% |
| !!! | TCTTATTTTTTTCATTTTAG+AGG | - | chr1.3:79160136-79160155 | MS.gene029071:CDS | 15.0% |
| !!! | TGTTTTTAACTAATTAACAT+AGG | + | chr1.3:79161179-79161198 | None:intergenic | 15.0% |
| !! | AAAACATAAAATTTGAGTGA+AGG | - | chr1.3:79160457-79160476 | MS.gene029071:intron | 20.0% |
| !! | AAAATAAATGAATCTTCCTT+GGG | - | chr1.3:79159853-79159872 | MS.gene029071:intron | 20.0% |
| !! | AAACATAAAATTTGAGTGAA+GGG | - | chr1.3:79160458-79160477 | MS.gene029071:intron | 20.0% |
| !! | AAATAGGTAGAATTAAGTAT+TGG | - | chr1.3:79160407-79160426 | MS.gene029071:intron | 20.0% |
| !! | AAGCAACAACAAATAATATA+GGG | + | chr1.3:79161082-79161101 | None:intergenic | 20.0% |
| !! | ACATAATTTATTTGTGTGTT+AGG | - | chr1.3:79158464-79158483 | MS.gene029071:intron | 20.0% |
| !! | ATTGAAAATTGGTATAAAAG+AGG | + | chr1.3:79158425-79158444 | None:intergenic | 20.0% |
| !! | GTTAATTAGTTAAAAACAGT+TGG | - | chr1.3:79161181-79161200 | MS.gene029071:intron | 20.0% |
| !! | TAAGTATCAAATGATTTGAT+TGG | - | chr1.3:79159031-79159050 | MS.gene029071:intron | 20.0% |
| !! | TAAGTTCAAAATAACCAAAA+TGG | + | chr1.3:79161363-79161382 | None:intergenic | 20.0% |
| !! | TTCAATTCAACAATAATGTA+AGG | + | chr1.3:79159604-79159623 | None:intergenic | 20.0% |
| !!! | AAAAATCAAGGTATTAGTTA+TGG | + | chr1.3:79159828-79159847 | None:intergenic | 20.0% |
| !!! | AAAATCAAGGTATTAGTTAT+GGG | + | chr1.3:79159827-79159846 | None:intergenic | 20.0% |
| !!! | AGAAAAGAATGATTTTTATG+TGG | - | chr1.3:79160383-79160402 | MS.gene029071:intron | 20.0% |
| !!! | AGATTTTGTTATGTTGTTTA+TGG | - | chr1.3:79161782-79161801 | MS.gene029071:CDS | 20.0% |
| !!! | ATAGTTCTTTTGAAAATAGT+AGG | - | chr1.3:79160483-79160502 | MS.gene029071:intron | 20.0% |
| !!! | GAAAAGAATGATTTTTATGT+GGG | - | chr1.3:79160384-79160403 | MS.gene029071:intron | 20.0% |
| !!! | TATATTATTTGTTGTTGCTT+CGG | - | chr1.3:79161082-79161101 | MS.gene029071:intron | 20.0% |
| !!! | TTATTTTGAGTGAAAAATCA+AGG | + | chr1.3:79159840-79159859 | None:intergenic | 20.0% |
| !!! | TTTTTTGTTTGTTTTGTGTA+TGG | - | chr1.3:79158833-79158852 | MS.gene029071:intron | 20.0% |
| ! | AAAATTGGTATAAAAGAGGA+TGG | + | chr1.3:79158421-79158440 | None:intergenic | 25.0% |
| ! | AACAATAATGTAAGGTTCAA+AGG | + | chr1.3:79159596-79159615 | None:intergenic | 25.0% |
| ! | AAGATACAATGTAGGAAATT+GGG | + | chr1.3:79161682-79161701 | None:intergenic | 25.0% |
| ! | AATTTCACTTGCTTAATTGT+CGG | + | chr1.3:79158240-79158259 | None:intergenic | 25.0% |
| ! | ACATTTACATAACTAACCAT+TGG | + | chr1.3:79158664-79158683 | None:intergenic | 25.0% |
| ! | AGAAATAAAAGTGACAGAAA+TGG | - | chr1.3:79161305-79161324 | MS.gene029071:intron | 25.0% |
| ! | ATATTGAAAAGTGGAAAAGT+AGG | + | chr1.3:79160089-79160108 | None:intergenic | 25.0% |
| ! | ATGCAGAAAATATTGAAAAG+TGG | + | chr1.3:79160098-79160117 | None:intergenic | 25.0% |
| ! | ATTTCAAGGTAACTATGATT+TGG | - | chr1.3:79160979-79160998 | MS.gene029071:CDS | 25.0% |
| ! | CAAAATAAATGAATCTTCCT+TGG | - | chr1.3:79159852-79159871 | MS.gene029071:intron | 25.0% |
| ! | CCAAGCAAGTATTTAATTAT+GGG | - | chr1.3:79161896-79161915 | MS.gene029071:CDS | 25.0% |
| ! | CTAGCAGAAAAATTGAAAAT+TGG | + | chr1.3:79158436-79158455 | None:intergenic | 25.0% |
| ! | GAAGCAACAACAAATAATAT+AGG | + | chr1.3:79161083-79161102 | None:intergenic | 25.0% |
| ! | TAACATTTGATATGTTGAAG+TGG | + | chr1.3:79160324-79160343 | None:intergenic | 25.0% |
| ! | TAAGATACAATGTAGGAAAT+TGG | + | chr1.3:79161683-79161702 | None:intergenic | 25.0% |
| ! | TATTGAAAAGTGGAAAAGTA+GGG | + | chr1.3:79160088-79160107 | None:intergenic | 25.0% |
| ! | TCCAAGCAAGTATTTAATTA+TGG | - | chr1.3:79161895-79161914 | MS.gene029071:CDS | 25.0% |
| ! | TGATTACTACATCTTGATTA+TGG | - | chr1.3:79159656-79159675 | MS.gene029071:intron | 25.0% |
| !! | AAATCAAGGTATTAGTTATG+GGG | + | chr1.3:79159826-79159845 | None:intergenic | 25.0% |
| !! | AAGACTTAGTTTAACCATTT+TGG | - | chr1.3:79161346-79161365 | MS.gene029071:intron | 25.0% |
| !! | AATTACAGCTTTAATTACCT+CGG | + | chr1.3:79159298-79159317 | None:intergenic | 25.0% |
| !! | ACAATTGTTCTTTTCTTTGT+TGG | + | chr1.3:79161139-79161158 | None:intergenic | 25.0% |
| !! | ATGATTTTTATGTGGGAAAT+AGG | - | chr1.3:79160391-79160410 | MS.gene029071:intron | 25.0% |
| !! | GATTGTATTTTCATTTCCTT+GGG | + | chr1.3:79159403-79159422 | None:intergenic | 25.0% |
| !! | TGATTGTATTTTCATTTCCT+TGG | + | chr1.3:79159404-79159423 | None:intergenic | 25.0% |
| !! | TTAATGTGTCACATCTTTTA+TGG | - | chr1.3:79161700-79161719 | MS.gene029071:intron | 25.0% |
| !! | TTTTAAATTTCAGACACCAA+TGG | - | chr1.3:79158645-79158664 | MS.gene029071:intron | 25.0% |
| !! | TTTTACAATAGAACCTCAAT+GGG | + | chr1.3:79160231-79160250 | None:intergenic | 25.0% |
| !! | TTTTTACAATAGAACCTCAA+TGG | + | chr1.3:79160232-79160251 | None:intergenic | 25.0% |
| !!! | TTTTGTTATGTTGTTTATGG+AGG | - | chr1.3:79161785-79161804 | MS.gene029071:CDS | 25.0% |
| AAAATACCAAAACTGTGTTG+TGG | - | chr1.3:79161488-79161507 | MS.gene029071:intron | 30.0% | |
| AAATATCCAGAAGCAATCTT+TGG | + | chr1.3:79160587-79160606 | None:intergenic | 30.0% | |
| AAATTTCGTTCTTCCAAACA+CGG | + | chr1.3:79158965-79158984 | None:intergenic | 30.0% | |
| AACAATTGTATTAGTCCATG+AGG | - | chr1.3:79161150-79161169 | MS.gene029071:intron | 30.0% | |
| AATATCCAGAAGCAATCTTT+GGG | + | chr1.3:79160586-79160605 | None:intergenic | 30.0% | |
| AATTAACATAGGTTACCTCA+TGG | + | chr1.3:79161168-79161187 | None:intergenic | 30.0% | |
| ACTTACATAGCATTTGCAAA+AGG | - | chr1.3:79160255-79160274 | MS.gene029071:intron | 30.0% | |
| AGATACAATGTAGGAAATTG+GGG | + | chr1.3:79161681-79161700 | None:intergenic | 30.0% | |
| AGTGTGATGCATAATAGATA+AGG | + | chr1.3:79159802-79159821 | None:intergenic | 30.0% | |
| AGTTTCACAACATCTACTTT+AGG | + | chr1.3:79159991-79160010 | None:intergenic | 30.0% | |
| ATATGTTGAAGTGGAATCAT+GGG | + | chr1.3:79160315-79160334 | None:intergenic | 30.0% | |
| CAAGAAAAAAACTAACCCAA+AGG | + | chr1.3:79160626-79160645 | None:intergenic | 30.0% | |
| CACTTCATAATATCAAGTGT+AGG | - | chr1.3:79161113-79161132 | MS.gene029071:intron | 30.0% | |
| CCCATAATTAAATACTTGCT+TGG | + | chr1.3:79161899-79161918 | None:intergenic | 30.0% | |
| CTTGAACGAGTATTAAGATT+TGG | + | chr1.3:79161022-79161041 | None:intergenic | 30.0% | |
| CTTGTAAGCACATATTTGTT+TGG | - | chr1.3:79160544-79160563 | MS.gene029071:intron | 30.0% | |
| GACAATTAAGCAAGTGAAAT+TGG | - | chr1.3:79158239-79158258 | MS.gene029071:CDS | 30.0% | |
| GACACATTAAGATACAATGT+AGG | + | chr1.3:79161690-79161709 | None:intergenic | 30.0% | |
| GAGTTACAAAATAGTTGAAC+AGG | + | chr1.3:79160697-79160716 | None:intergenic | 30.0% | |
| GTTATAGATTTGACGTGTAA+TGG | - | chr1.3:79161452-79161471 | MS.gene029071:CDS | 30.0% | |
| TAATTATGGGAACCTTAACA+TGG | - | chr1.3:79161909-79161928 | MS.gene029071:CDS | 30.0% | |
| TGTCCATAAAAGTAAACAAG+AGG | + | chr1.3:79159268-79159287 | None:intergenic | 30.0% | |
| TTACTACATCTTGATTATGG+TGG | - | chr1.3:79159659-79159678 | MS.gene029071:intron | 30.0% | |
| TTATTATAGATTGCCGTGTT+TGG | - | chr1.3:79158949-79158968 | MS.gene029071:intron | 30.0% | |
| TTTCCTATAAGGAGTTCAAA+CGG | + | chr1.3:79159930-79159949 | None:intergenic | 30.0% | |
| ! | AAAATTCCACAACACAGTTT+TGG | + | chr1.3:79161497-79161516 | None:intergenic | 30.0% |
| ! | ATCAAATGATTTGATTGGTC+AGG | - | chr1.3:79159036-79159055 | MS.gene029071:intron | 30.0% |
| ! | ATTGTATAAAGTGCTTGTCA+AGG | - | chr1.3:79159458-79159477 | MS.gene029071:intron | 30.0% |
| ! | ATTTTTGTAAACTTGGTCTC+AGG | - | chr1.3:79159900-79159919 | MS.gene029071:intron | 30.0% |
| ! | GATATTTTGCTTAGTAGCTT+TGG | - | chr1.3:79160600-79160619 | MS.gene029071:CDS | 30.0% |
| ! | TCAAATGATTTGATTGGTCA+GGG | - | chr1.3:79159037-79159056 | MS.gene029071:intron | 30.0% |
| ! | TGTTAGGTTTTTACTTGGTA+TGG | - | chr1.3:79158480-79158499 | MS.gene029071:intron | 30.0% |
| ! | TTGATGCAGGAATACTTTTA+TGG | - | chr1.3:79160742-79160761 | MS.gene029071:intron | 30.0% |
| ! | TTGTGTGTTAGGTTTTTACT+TGG | - | chr1.3:79158475-79158494 | MS.gene029071:intron | 30.0% |
| ! | TTTTATTGTGTCTCGTGATT+AGG | - | chr1.3:79158763-79158782 | MS.gene029071:intron | 30.0% |
| !! | ATGCCTCTTGTTTACTTTTA+TGG | - | chr1.3:79159262-79159281 | MS.gene029071:CDS | 30.0% |
| !! | GATTTTCTTTTGAAGGACAA+AGG | + | chr1.3:79161389-79161408 | None:intergenic | 30.0% |
| !!! | AATGTGCATGCTATTTTAGA+AGG | - | chr1.3:79158679-79158698 | MS.gene029071:intron | 30.0% |
| AAAGCCACCTAAATAAGGTT+AGG | + | chr1.3:79161598-79161617 | None:intergenic | 35.0% | |
| AAATCTCAGCGTTTCCATTA+AGG | + | chr1.3:79158320-79158339 | None:intergenic | 35.0% | |
| AACCTGATGAGATCATTTCA+AGG | - | chr1.3:79160965-79160984 | MS.gene029071:CDS | 35.0% | |
| AAGCCACCTAAATAAGGTTA+GGG | + | chr1.3:79161597-79161616 | None:intergenic | 35.0% | |
| AATATCCAAGTCAACAAAGG+TGG | + | chr1.3:79159155-79159174 | None:intergenic | 35.0% | |
| ACCAAAAGAACAAGTAAGAG+AGG | + | chr1.3:79159696-79159715 | None:intergenic | 35.0% | |
| AGATGACTCTGTATTATCTC+AGG | - | chr1.3:79158732-79158751 | MS.gene029071:intron | 35.0% | |
| AGTCCAGAAGTAATAGGATA+AGG | - | chr1.3:79160058-79160077 | MS.gene029071:CDS | 35.0% | |
| ATAAATGAATCTTCCTTGGG+AGG | - | chr1.3:79159856-79159875 | MS.gene029071:intron | 35.0% | |
| ATAGCATCACATCTCACAAA+CGG | + | chr1.3:79161426-79161445 | None:intergenic | 35.0% | |
| ATATCCAAGTCAACAAAGGT+GGG | + | chr1.3:79159154-79159173 | None:intergenic | 35.0% | |
| ATTAACTGCAATTAGCAGCT+TGG | + | chr1.3:79160362-79160381 | None:intergenic | 35.0% | |
| CAAAAGAACAAGTAAGAGAG+GGG | + | chr1.3:79159694-79159713 | None:intergenic | 35.0% | |
| CCAAAAGAACAAGTAAGAGA+GGG | + | chr1.3:79159695-79159714 | None:intergenic | 35.0% | |
| GAGGAGAAAGATCATTTGTA+AGG | + | chr1.3:79160768-79160787 | None:intergenic | 35.0% | |
| GATAATACAGAGTCATCTGA+AGG | + | chr1.3:79158730-79158749 | None:intergenic | 35.0% | |
| GATATGTTGAAGTGGAATCA+TGG | + | chr1.3:79160316-79160335 | None:intergenic | 35.0% | |
| GGAAGAACGAAATTTGTGAT+TGG | - | chr1.3:79158970-79158989 | MS.gene029071:intron | 35.0% | |
| GTCCAGAAGTAATAGGATAA+GGG | - | chr1.3:79160059-79160078 | MS.gene029071:CDS | 35.0% | |
| GTCTGTTACATAGATAAAGC+CGG | + | chr1.3:79161739-79161758 | None:intergenic | 35.0% | |
| TAACAGACATTGACATTCAG+AGG | - | chr1.3:79161751-79161770 | MS.gene029071:CDS | 35.0% | |
| TACAAAATAGTTGAACAGGC+AGG | + | chr1.3:79160693-79160712 | None:intergenic | 35.0% | |
| TACCCTTATCCTATTACTTC+TGG | + | chr1.3:79160064-79160083 | None:intergenic | 35.0% | |
| TACCTTGAAATGATCTCATC+AGG | + | chr1.3:79160970-79160989 | None:intergenic | 35.0% | |
| TAGATGTTGTGAAACTTCAG+AGG | - | chr1.3:79159995-79160014 | MS.gene029071:intron | 35.0% | |
| TAGGGATCAAACACTATCAT+CGG | + | chr1.3:79161064-79161083 | None:intergenic | 35.0% | |
| TAGTTAAAAACAGTTGGGCA+GGG | - | chr1.3:79161187-79161206 | MS.gene029071:intron | 35.0% | |
| TCAACAAAGCCACCTAAATA+AGG | + | chr1.3:79161603-79161622 | None:intergenic | 35.0% | |
| TCAAGTTTCAAGCCATGTTA+AGG | + | chr1.3:79161924-79161943 | None:intergenic | 35.0% | |
| TGAGATGTGATGCTATATCA+AGG | - | chr1.3:79161430-79161449 | MS.gene029071:CDS | 35.0% | |
| TGGTATAAAAGAGGATGGAA+GGG | + | chr1.3:79158416-79158435 | None:intergenic | 35.0% | |
| TTAGTTAAAAACAGTTGGGC+AGG | - | chr1.3:79161186-79161205 | MS.gene029071:intron | 35.0% | |
| TTGGTATAAAAGAGGATGGA+AGG | + | chr1.3:79158417-79158436 | None:intergenic | 35.0% | |
| TTTCCGTTTGAACTCCTTAT+AGG | - | chr1.3:79159924-79159943 | MS.gene029071:intron | 35.0% | |
| ! | AACGAAATTTGTGATTGGTC+AGG | - | chr1.3:79158975-79158994 | MS.gene029071:intron | 35.0% |
| ! | AATGGAAACGCTGAGATTTT+TGG | - | chr1.3:79158321-79158340 | MS.gene029071:intron | 35.0% |
| ! | ACTGCACAGTTTTTCCTATA+AGG | + | chr1.3:79159941-79159960 | None:intergenic | 35.0% |
| ! | GACTTGTTTGTTTATCGAGT+TGG | - | chr1.3:79160811-79160830 | MS.gene029071:intron | 35.0% |
| ! | GGAATGGTGTTAAATACCAT+GGG | - | chr1.3:79159537-79159556 | MS.gene029071:intron | 35.0% |
| ! | TGCACAGGATTTTCTTTTGA+AGG | + | chr1.3:79161396-79161415 | None:intergenic | 35.0% |
| ! | TGGAATGGTGTTAAATACCA+TGG | - | chr1.3:79159536-79159555 | MS.gene029071:intron | 35.0% |
| !! | AACAGTGCTGATAAATGCAA+AGG | + | chr1.3:79160511-79160530 | None:intergenic | 35.0% |
| !! | ACCTTTGTTGACTTGGATAT+TGG | - | chr1.3:79159154-79159173 | MS.gene029071:CDS | 35.0% |
| !! | ATTCAAGGCTGATGTTGTTT+TGG | - | chr1.3:79159754-79159773 | MS.gene029071:intron | 35.0% |
| !! | CTGCTATTTGATTTTGATGC+AGG | - | chr1.3:79160729-79160748 | MS.gene029071:intron | 35.0% |
| !! | CTTTCTTTGAAACTCACTCA+TGG | - | chr1.3:79158589-79158608 | MS.gene029071:intron | 35.0% |
| !! | TAAACAAGAGGCATTTCAAG+AGG | + | chr1.3:79159256-79159275 | None:intergenic | 35.0% |
| !! | TTGTTTGTTTATCGAGTTGG+TGG | - | chr1.3:79160814-79160833 | MS.gene029071:intron | 35.0% |
| !! | TTTCTTTTGAAGGACAAAGG+AGG | + | chr1.3:79161386-79161405 | None:intergenic | 35.0% |
| !!! | GCTGATGTTGTTTTGGTTTT+GGG | - | chr1.3:79159761-79159780 | MS.gene029071:intron | 35.0% |
| AAAGTGATTTACCTCATCCG+CGG | + | chr1.3:79158547-79158566 | None:intergenic | 40.0% | |
| AAATTGAGCCAGATTTCAGG+TGG | + | chr1.3:79158357-79158376 | None:intergenic | 40.0% | |
| AAGAAAATCCTGTGCAAACG+AGG | - | chr1.3:79161400-79161419 | MS.gene029071:CDS | 40.0% | |
| AATACCATGGGATGGATAGA+AGG | - | chr1.3:79159549-79159568 | MS.gene029071:intron | 40.0% | |
| AATCATTAACAGCACACCCA+AGG | - | chr1.3:79159384-79159403 | MS.gene029071:intron | 40.0% | |
| AATGATCTCATCAGGTTCCT+TGG | + | chr1.3:79160962-79160981 | None:intergenic | 40.0% | |
| AATTGAAATGCCCATCGATC+CGG | - | chr1.3:79159219-79159238 | MS.gene029071:CDS | 40.0% | |
| ACAATGTAGGAAATTGGGGA+TGG | + | chr1.3:79161677-79161696 | None:intergenic | 40.0% | |
| AGGGATCAAACACTATCATC+GGG | + | chr1.3:79161063-79161082 | None:intergenic | 40.0% | |
| AGTGGAATCATGGGAATATG+AGG | + | chr1.3:79160306-79160325 | None:intergenic | 40.0% | |
| ATACTGGAGAGACAATTTGC+TGG | - | chr1.3:79159492-79159511 | MS.gene029071:intron | 40.0% | |
| ATCATGGGAATATGAGGTCA+CGG | + | chr1.3:79160300-79160319 | None:intergenic | 40.0% | |
| CAAACGAATGTGTGTTCATG+TGG | + | chr1.3:79159353-79159372 | None:intergenic | 40.0% | |
| CAACATCAGCCTTGAATGTA+CGG | + | chr1.3:79159751-79159770 | None:intergenic | 40.0% | |
| CAAGGGTCTATAACAATTCC+TGG | - | chr1.3:79159178-79159197 | MS.gene029071:CDS | 40.0% | |
| CAATGTAGGAAATTGGGGAT+GGG | + | chr1.3:79161676-79161695 | None:intergenic | 40.0% | |
| CAGGAATTGTTATAGACCCT+TGG | + | chr1.3:79159180-79159199 | None:intergenic | 40.0% | |
| CGAATTTGAACCAGTAACAG+CGG | + | chr1.3:79158214-79158233 | None:intergenic | 40.0% | |
| GAATTTGAACCAGTAACAGC+GGG | + | chr1.3:79158213-79158232 | None:intergenic | 40.0% | |
| GCCAATATCCAAGTCAACAA+AGG | + | chr1.3:79159158-79159177 | None:intergenic | 40.0% | |
| GGAAAATTGAGCCAGATTTC+AGG | + | chr1.3:79158360-79158379 | None:intergenic | 40.0% | |
| GGAAGGGAATAGAAGAGTTA+CGG | + | chr1.3:79158400-79158419 | None:intergenic | 40.0% | |
| GTAGTCTTTCCAGAATCTGA+AGG | + | chr1.3:79159085-79159104 | None:intergenic | 40.0% | |
| GTCAAGGATGCTTCTTAGTT+GGG | - | chr1.3:79159108-79159127 | MS.gene029071:intron | 40.0% | |
| TATCAACCTACTTGCAACAG+CGG | + | chr1.3:79161235-79161254 | None:intergenic | 40.0% | |
| TATTACTTCTGGACTTCTGG+CGG | + | chr1.3:79160053-79160072 | None:intergenic | 40.0% | |
| TCCTATTACTTCTGGACTTC+TGG | + | chr1.3:79160056-79160075 | None:intergenic | 40.0% | |
| TCTCGTGATTAGGAGAAGAT+TGG | - | chr1.3:79158773-79158792 | MS.gene029071:intron | 40.0% | |
| TGGATGCTTCATGTATCTGT+TGG | - | chr1.3:79158793-79158812 | MS.gene029071:intron | 40.0% | |
| TGTCAAGGATGCTTCTTAGT+TGG | - | chr1.3:79159107-79159126 | MS.gene029071:intron | 40.0% | |
| TGTTGTGAAACTTCAGAGGT+CGG | - | chr1.3:79159999-79160018 | MS.gene029071:intron | 40.0% | |
| ! | CCCTCTCTTACTTGTTCTTT+TGG | - | chr1.3:79159692-79159711 | MS.gene029071:intron | 40.0% |
| ! | GCTTGACCCTAACCTTATTT+AGG | - | chr1.3:79161588-79161607 | MS.gene029071:CDS | 40.0% |
| ! | TGACCCTAACCTTATTTAGG+TGG | - | chr1.3:79161591-79161610 | MS.gene029071:CDS | 40.0% |
| ! | TGGTGTTAAATACCATGGGA+TGG | - | chr1.3:79159541-79159560 | MS.gene029071:intron | 40.0% |
| !! | ACTAAGAAGCATCCTTGACA+AGG | + | chr1.3:79159107-79159126 | None:intergenic | 40.0% |
| !! | AGGAGTACCATCCATTTCAA+TGG | + | chr1.3:79158511-79158530 | None:intergenic | 40.0% |
| !! | CTGTTGCAAGTAGGTTGATA+TGG | - | chr1.3:79161235-79161254 | MS.gene029071:intron | 40.0% |
| !! | GTATGGTGCTACCATTGAAA+TGG | - | chr1.3:79158497-79158516 | MS.gene029071:intron | 40.0% |
| !! | TGCAAGTAGGTTGATATGGA+AGG | - | chr1.3:79161239-79161258 | MS.gene029071:intron | 40.0% |
| !! | TTGACTTGGATATTGGCCAA+GGG | - | chr1.3:79159161-79159180 | MS.gene029071:CDS | 40.0% |
| !! | TTGTTTATCGAGTTGGTGGT+GGG | - | chr1.3:79160818-79160837 | MS.gene029071:intron | 40.0% |
| !! | TTTGTTTATCGAGTTGGTGG+TGG | - | chr1.3:79160817-79160836 | MS.gene029071:intron | 40.0% |
| !!! | GGCTGATGTTGTTTTGGTTT+TGG | - | chr1.3:79159760-79159779 | MS.gene029071:intron | 40.0% |
| ACATACCTTACACCATCTGC+TGG | - | chr1.3:79161866-79161885 | MS.gene029071:CDS | 45.0% | |
| AGATAAGGCTACCATCTACC+TGG | + | chr1.3:79159787-79159806 | None:intergenic | 45.0% | |
| AGGAAATTGGGGATGGGAAA+GGG | + | chr1.3:79161670-79161689 | None:intergenic | 45.0% | |
| ATGGATGGTACTCCTGAAAC+TGG | - | chr1.3:79158516-79158535 | MS.gene029071:intron | 45.0% | |
| ATGGGATGGATAGAAGGAGT+GGG | - | chr1.3:79159555-79159574 | MS.gene029071:intron | 45.0% | |
| CAAAAGGCCTATTACACGAC+TGG | - | chr1.3:79160271-79160290 | MS.gene029071:intron | 45.0% | |
| CAATTTCCGCTGTTGCAAGT+AGG | - | chr1.3:79161226-79161245 | MS.gene029071:intron | 45.0% | |
| CATTGCCCAAAGATTGCTTC+TGG | - | chr1.3:79160578-79160597 | MS.gene029071:CDS | 45.0% | |
| CTGGAAAGACTACCTTGTCA+AGG | - | chr1.3:79159092-79159111 | MS.gene029071:intron | 45.0% | |
| CTTAGTTGGGCAGCAAAACA+AGG | - | chr1.3:79159121-79159140 | MS.gene029071:intron | 45.0% | |
| CTTCGTCTTCGACTCCTTAA+TGG | - | chr1.3:79158303-79158322 | MS.gene029071:intron | 45.0% | |
| GATGGGCATTTCAATTGGAG+TGG | + | chr1.3:79159215-79159234 | None:intergenic | 45.0% | |
| GCATGCAATCCGTACATTCA+AGG | - | chr1.3:79159739-79159758 | MS.gene029071:intron | 45.0% | |
| GCCAGAAGTCCAGAAGTAAT+AGG | - | chr1.3:79160052-79160071 | MS.gene029071:CDS | 45.0% | |
| GGATCGATGGGCATTTCAAT+TGG | + | chr1.3:79159220-79159239 | None:intergenic | 45.0% | |
| GTCCAACAACAATCACCCTA+GGG | + | chr1.3:79159063-79159082 | None:intergenic | 45.0% | |
| GTGAATGTTACGAATGCCCA+AGG | + | chr1.3:79160662-79160681 | None:intergenic | 45.0% | |
| GTTGTGAAACTTCAGAGGTC+GGG | - | chr1.3:79160000-79160019 | MS.gene029071:intron | 45.0% | |
| GTTGTTGGACCTTCAGATTC+TGG | - | chr1.3:79159073-79159092 | MS.gene029071:intron | 45.0% | |
| TAGGAAATTGGGGATGGGAA+AGG | + | chr1.3:79161671-79161690 | None:intergenic | 45.0% | |
| TCATGGGAATATGAGGTCAC+GGG | + | chr1.3:79160299-79160318 | None:intergenic | 45.0% | |
| TCCTGAAACTGGTTATACCG+CGG | - | chr1.3:79158527-79158546 | MS.gene029071:intron | 45.0% | |
| TTAAGGAGTCGAAGACGAAG+AGG | + | chr1.3:79158303-79158322 | None:intergenic | 45.0% | |
| TTATGGTGCAGCAATGTTGC+CGG | - | chr1.3:79161717-79161736 | MS.gene029071:intron | 45.0% | |
| TTCACAGCTACAACTCTCGT+TGG | + | chr1.3:79160895-79160914 | None:intergenic | 45.0% | |
| TTGCTCAGAGACGTGCTTAA+GGG | - | chr1.3:79159961-79159980 | MS.gene029071:intron | 45.0% | |
| TTTATGGACACACATCTCCG+AGG | - | chr1.3:79159278-79159297 | MS.gene029071:CDS | 45.0% | |
| TTTGCTCAGAGACGTGCTTA+AGG | - | chr1.3:79159960-79159979 | MS.gene029071:intron | 45.0% | |
| ! | AATATACAGAGCACCTCCCA+AGG | + | chr1.3:79159872-79159891 | None:intergenic | 45.0% |
| ! | GGTGCTACCATTGAAATGGA+TGG | - | chr1.3:79158501-79158520 | MS.gene029071:intron | 45.0% |
| ! | TTGTTTTCTCCCTGCTCCTT+GGG | - | chr1.3:79160643-79160662 | MS.gene029071:CDS | 45.0% |
| !! | CTTTGAAACTCACTCATGGC+TGG | - | chr1.3:79158593-79158612 | MS.gene029071:intron | 45.0% |
| !! | GCTTAGTAGCTTTGGCCTTT+GGG | - | chr1.3:79160608-79160627 | MS.gene029071:CDS | 45.0% |
| !! | GTTGACTTGGATATTGGCCA+AGG | - | chr1.3:79159160-79159179 | MS.gene029071:CDS | 45.0% |
| !! | TGCTTAGTAGCTTTGGCCTT+TGG | - | chr1.3:79160607-79160626 | MS.gene029071:CDS | 45.0% |
| !!! | TGTTGTTTTGGTTTTGGGCC+AGG | - | chr1.3:79159766-79159785 | MS.gene029071:intron | 45.0% |
| !! | ATCATTATTATTATTATTAA+GGG | - | chr1.3:79158909-79158928 | MS.gene029071:intron | 5.0% |
| AACTGGTTATACCGCGGATG+AGG | - | chr1.3:79158533-79158552 | MS.gene029071:intron | 50.0% | |
| ACGGGTTCCAGTCGTGTAAT+AGG | + | chr1.3:79160281-79160300 | None:intergenic | 50.0% | |
| AGGTTCTGCTCCAATTGGCA+AGG | + | chr1.3:79160863-79160882 | None:intergenic | 50.0% | |
| AGTTACGGCGAACTTGAGTC+TGG | + | chr1.3:79158385-79158404 | None:intergenic | 50.0% | |
| CACTCCTTCTATCCATCCCA+TGG | + | chr1.3:79159556-79159575 | None:intergenic | 50.0% | |
| CATGGGATGGATAGAAGGAG+TGG | - | chr1.3:79159554-79159573 | MS.gene029071:intron | 50.0% | |
| CCTTGGCAAATGAGACAGCA+AGG | + | chr1.3:79160945-79160964 | None:intergenic | 50.0% | |
| CTTGGAAGTTCTCCAGCAGA+TGG | + | chr1.3:79161881-79161900 | None:intergenic | 50.0% | |
| GCAAGTTGTAACCACAGTGG+GGG | - | chr1.3:79160188-79160207 | MS.gene029071:intron | 50.0% | |
| GGCAAGTTGTAACCACAGTG+GGG | - | chr1.3:79160187-79160206 | MS.gene029071:intron | 50.0% | |
| GGGCAAGTTGTAACCACAGT+GGG | - | chr1.3:79160186-79160205 | MS.gene029071:intron | 50.0% | |
| GGTCCAACAACAATCACCCT+AGG | + | chr1.3:79159064-79159083 | None:intergenic | 50.0% | |
| GTAACCACAGTGGGGGTTTA+GGG | - | chr1.3:79160195-79160214 | MS.gene029071:intron | 50.0% | |
| GTTACGGCGAACTTGAGTCT+GGG | + | chr1.3:79158384-79158403 | None:intergenic | 50.0% | |
| GTTCTCCAGCAGATGGTGTA+AGG | + | chr1.3:79161874-79161893 | None:intergenic | 50.0% | |
| GTTGGGCAGCAAAACAAGGT+TGG | - | chr1.3:79159125-79159144 | MS.gene029071:intron | 50.0% | |
| TAACACCATTCCAGCAGCTC+TGG | + | chr1.3:79159529-79159548 | None:intergenic | 50.0% | |
| TCAAGAGGAATTCCCTCCAC+CGG | + | chr1.3:79159241-79159260 | None:intergenic | 50.0% | |
| TCCGCGGTATAACCAGTTTC+AGG | + | chr1.3:79158531-79158550 | None:intergenic | 50.0% | |
| TCGAAGACGAAGAGGTGAGT+CGG | + | chr1.3:79158295-79158314 | None:intergenic | 50.0% | |
| TGAAACTCACTCATGGCTGG+CGG | - | chr1.3:79158596-79158615 | MS.gene029071:intron | 50.0% | |
| TGGGCAAGTTGTAACCACAG+TGG | - | chr1.3:79160185-79160204 | MS.gene029071:intron | 50.0% | |
| TGTAACCACAGTGGGGGTTT+AGG | - | chr1.3:79160194-79160213 | MS.gene029071:intron | 50.0% | |
| TTACGAATGCCCAAGGAGCA+GGG | + | chr1.3:79160655-79160674 | None:intergenic | 50.0% | |
| ! | ATTTGATTGGTCAGGGCCCT+AGG | - | chr1.3:79159044-79159063 | MS.gene029071:intron | 50.0% |
| ! | CCAGATTTCAGGTGGAAGCT+CGG | + | chr1.3:79158349-79158368 | None:intergenic | 50.0% |
| ! | CCTTGCTGTCTCATTTGCCA+AGG | - | chr1.3:79160942-79160961 | MS.gene029071:CDS | 50.0% |
| ! | GAAGCCCACCTTTGTTGACT+TGG | - | chr1.3:79159147-79159166 | MS.gene029071:CDS | 50.0% |
| ! | TTTGATTGGTCAGGGCCCTA+GGG | - | chr1.3:79159045-79159064 | MS.gene029071:intron | 50.0% |
| !! | CTTGTTTTCTCCCTGCTCCT+TGG | - | chr1.3:79160642-79160661 | MS.gene029071:CDS | 50.0% |
| !!! | TTGGTTTTGGGCCAGGTAGA+TGG | - | chr1.3:79159773-79159792 | MS.gene029071:intron | 50.0% |
| AAAACAGTTGGGCAGGGAGC+TGG | - | chr1.3:79161193-79161212 | MS.gene029071:intron | 55.0% | |
| AAACAGTTGGGCAGGGAGCT+GGG | - | chr1.3:79161194-79161213 | MS.gene029071:intron | 55.0% | |
| AATTCCCTCCACCGGATCGA+TGG | + | chr1.3:79159233-79159252 | None:intergenic | 55.0% | |
| ACAAACGGCCTCGTTTGCAC+AGG | + | chr1.3:79161411-79161430 | None:intergenic | 55.0% | |
| ACTCTCGTTGGATCTGCAGC+AGG | + | chr1.3:79160883-79160902 | None:intergenic | 55.0% | |
| AGTGCTTGTCAAGGAGCTCG+CGG | - | chr1.3:79159467-79159486 | MS.gene029071:intron | 55.0% | |
| ATGAGACAGCAAGGACTGCG+TGG | + | chr1.3:79160936-79160955 | None:intergenic | 55.0% | |
| ATTCCCTCCACCGGATCGAT+GGG | + | chr1.3:79159232-79159251 | None:intergenic | 55.0% | |
| CCGAGCTTCCACCTGAAATC+TGG | - | chr1.3:79158346-79158365 | MS.gene029071:intron | 55.0% | |
| GACTTCTGGCGGAACTTCAC+AGG | + | chr1.3:79160042-79160061 | None:intergenic | 55.0% | |
| GCAGCAGGTTCTGCTCCAAT+TGG | + | chr1.3:79160868-79160887 | None:intergenic | 55.0% | |
| GGCCCTAGGGTGATTGTTGT+TGG | - | chr1.3:79159058-79159077 | MS.gene029071:intron | 55.0% | |
| GGGAAGGTTTGAGCCCATTG+AGG | - | chr1.3:79160215-79160234 | MS.gene029071:intron | 55.0% | |
| GGTCGGGTGGAGTTGTATCT+AGG | - | chr1.3:79160016-79160035 | MS.gene029071:intron | 55.0% | |
| GTGAAACTTCAGAGGTCGGG+TGG | - | chr1.3:79160003-79160022 | MS.gene029071:intron | 55.0% | |
| GTTACGAATGCCCAAGGAGC+AGG | + | chr1.3:79160656-79160675 | None:intergenic | 55.0% | |
| TAACAAGTGCGAGTGCCCCT+CGG | - | chr1.3:79161555-79161574 | MS.gene029071:intron | 55.0% | |
| TCAAGCTAACCAGTGCCCGA+GGG | + | chr1.3:79161574-79161593 | None:intergenic | 55.0% | |
| TGAAATGCCCATCGATCCGG+TGG | - | chr1.3:79159222-79159241 | MS.gene029071:CDS | 55.0% | |
| !! | CATTCCAGCAGCTCTGGACT+CGG | + | chr1.3:79159523-79159542 | None:intergenic | 55.0% |
| AACAAGTGCGAGTGCCCCTC+GGG | - | chr1.3:79161556-79161575 | MS.gene029071:intron | 60.0% | |
| AAGGCAGAGCGTGGAGCTTG+TGG | + | chr1.3:79160844-79160863 | None:intergenic | 60.0% | |
| AATGCCCATCGATCCGGTGG+AGG | - | chr1.3:79159225-79159244 | MS.gene029071:CDS | 60.0% | |
| AATGCCGAGTCCAGAGCTGC+TGG | - | chr1.3:79159516-79159535 | MS.gene029071:intron | 60.0% | |
| ACGGCGAACTTGAGTCTGGG+AGG | + | chr1.3:79158381-79158400 | None:intergenic | 60.0% | |
| ATGCCCATCGATCCGGTGGA+GGG | - | chr1.3:79159226-79159245 | MS.gene029071:CDS | 60.0% | |
| CAAGCTAACCAGTGCCCGAG+GGG | + | chr1.3:79161573-79161592 | None:intergenic | 60.0% | |
| CCAATTGGCAAGGCAGAGCG+TGG | + | chr1.3:79160853-79160872 | None:intergenic | 60.0% | |
| CCACAGTGGGGGTTTAGGGA+AGG | - | chr1.3:79160199-79160218 | MS.gene029071:intron | 60.0% | |
| CCACGCTCTGCCTTGCCAAT+TGG | - | chr1.3:79160850-79160869 | MS.gene029071:CDS | 60.0% | |
| CCTTCCCTAAACCCCCACTG+TGG | + | chr1.3:79160202-79160221 | None:intergenic | 60.0% | |
| CGAGTCCAGAGCTGCTGGAA+TGG | - | chr1.3:79159521-79159540 | MS.gene029071:intron | 60.0% | |
| GGAGTGGCAGCAATGCATCC+AGG | + | chr1.3:79159199-79159218 | None:intergenic | 60.0% | |
| GTCAAGCTAACCAGTGCCCG+AGG | + | chr1.3:79161575-79161594 | None:intergenic | 60.0% | |
| GTGCTTGTCAAGGAGCTCGC+GGG | - | chr1.3:79159468-79159487 | MS.gene029071:intron | 60.0% | |
| TGCTTGTCAAGGAGCTCGCG+GGG | - | chr1.3:79159469-79159488 | MS.gene029071:intron | 60.0% | |
| CAAGGAGCTCGCGGGGATAC+TGG | - | chr1.3:79159476-79159495 | MS.gene029071:intron | 65.0% | |
| CTCACTCATGGCTGGCGGAG+AGG | - | chr1.3:79158601-79158620 | MS.gene029071:intron | 65.0% | |
| GGTGCAGGTCCCGCTGTTAC+TGG | - | chr1.3:79158201-79158220 | MS.gene029071:CDS | 65.0% | |
| TGCGAGTGCCCCTCGGGCAC+TGG | - | chr1.3:79161562-79161581 | MS.gene029071:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 79158189 | 79161943 | 79158189 | ID=MS.gene029071 |
| chr1.3 | mRNA | 79158189 | 79161943 | 79158189 | ID=MS.gene029071.t1;Parent=MS.gene029071 |
| chr1.3 | exon | 79161734 | 79161943 | 79161734 | ID=MS.gene029071.t1.exon1;Parent=MS.gene029071.t1 |
| chr1.3 | CDS | 79161734 | 79161943 | 79161734 | ID=cds.MS.gene029071.t1;Parent=MS.gene029071.t1 |
| chr1.3 | exon | 79161578 | 79161646 | 79161578 | ID=MS.gene029071.t1.exon2;Parent=MS.gene029071.t1 |
| chr1.3 | CDS | 79161578 | 79161646 | 79161578 | ID=cds.MS.gene029071.t1;Parent=MS.gene029071.t1 |
| chr1.3 | exon | 79161379 | 79161474 | 79161379 | ID=MS.gene029071.t1.exon3;Parent=MS.gene029071.t1 |
| chr1.3 | CDS | 79161379 | 79161474 | 79161379 | ID=cds.MS.gene029071.t1;Parent=MS.gene029071.t1 |
| chr1.3 | exon | 79160833 | 79161074 | 79160833 | ID=MS.gene029071.t1.exon4;Parent=MS.gene029071.t1 |
| chr1.3 | CDS | 79160833 | 79161074 | 79160833 | ID=cds.MS.gene029071.t1;Parent=MS.gene029071.t1 |
| chr1.3 | exon | 79160548 | 79160686 | 79160548 | ID=MS.gene029071.t1.exon5;Parent=MS.gene029071.t1 |
| chr1.3 | CDS | 79160548 | 79160686 | 79160548 | ID=cds.MS.gene029071.t1;Parent=MS.gene029071.t1 |
| chr1.3 | exon | 79160345 | 79160401 | 79160345 | ID=MS.gene029071.t1.exon6;Parent=MS.gene029071.t1 |
| chr1.3 | CDS | 79160345 | 79160401 | 79160345 | ID=cds.MS.gene029071.t1;Parent=MS.gene029071.t1 |
| chr1.3 | exon | 79160052 | 79160186 | 79160052 | ID=MS.gene029071.t1.exon7;Parent=MS.gene029071.t1 |
| chr1.3 | CDS | 79160052 | 79160186 | 79160052 | ID=cds.MS.gene029071.t1;Parent=MS.gene029071.t1 |
| chr1.3 | exon | 79159146 | 79159381 | 79159146 | ID=MS.gene029071.t1.exon8;Parent=MS.gene029071.t1 |
| chr1.3 | CDS | 79159146 | 79159381 | 79159146 | ID=cds.MS.gene029071.t1;Parent=MS.gene029071.t1 |
| chr1.3 | exon | 79158360 | 79158404 | 79158360 | ID=MS.gene029071.t1.exon9;Parent=MS.gene029071.t1 |
| chr1.3 | CDS | 79158360 | 79158404 | 79158360 | ID=cds.MS.gene029071.t1;Parent=MS.gene029071.t1 |
| chr1.3 | exon | 79158189 | 79158276 | 79158189 | ID=MS.gene029071.t1.exon10;Parent=MS.gene029071.t1 |
| chr1.3 | CDS | 79158189 | 79158276 | 79158189 | ID=cds.MS.gene029071.t1;Parent=MS.gene029071.t1 |
| Gene Sequence |
| Protein sequence |
