AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene02928

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02928.t1 MTR_2g026310 97.096 551 15 1 1 551 1 550 0.0 1109
MS.gene02928.t1 MTR_2g026380 68.539 534 110 4 19 551 18 494 0.0 727
MS.gene02928.t1 MTR_7g063290 70.522 536 88 6 19 551 18 486 0.0 700
MS.gene02928.t1 MTR_3g082790 52.518 556 226 8 18 549 20 561 0.0 543
MS.gene02928.t1 MTR_3g082790 52.642 530 215 6 42 549 6 521 0.0 530
MS.gene02928.t1 MTR_3g081360 51.789 531 231 7 19 549 5 510 0.0 525
MS.gene02928.t1 MTR_3g081420 72.115 208 57 1 344 551 2 208 7.95e-100 301
MS.gene02928.t1 MTR_3g081380 60.494 162 62 1 19 178 16 177 8.59e-67 215
MS.gene02928.t1 MTR_7g062030 82.500 80 14 0 17 96 30 109 2.51e-36 132
MS.gene02928.t1 MTR_3g081390 65.556 90 31 0 90 179 36 125 2.22e-32 121
MS.gene02928.t1 MTR_3g081410 61.607 112 38 2 377 483 1 112 8.30e-31 117
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02928.t1 AT4G16420 58.559 555 155 9 1 552 1 483 0.0 631
MS.gene02928.t1 AT4G16420 58.571 560 151 11 1 552 1 487 0.0 627
MS.gene02928.t1 AT4G16420 58.571 560 150 11 1 552 1 486 0.0 626
MS.gene02928.t1 AT3G07740 46.167 574 256 11 1 550 1 545 8.24e-159 464
MS.gene02928.t1 AT3G07740 47.212 538 233 9 35 550 16 524 2.02e-156 457
MS.gene02928.t1 AT3G07740 45.439 581 257 12 1 550 1 552 5.85e-156 457
MS.gene02928.t1 AT3G07740 47.012 502 216 8 70 550 2 474 5.57e-142 419

Find 134 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCATTTCTTGAGGAATT+TGG 0.167298 2.4:+62253570 None:intergenic
TCTCCAATGGACAGAGATTT+TGG 0.183129 2.4:-62253603 MS.gene02928:CDS
TATATTGTAGGGTCAGATTC+TGG 0.192149 2.4:-62253843 MS.gene02928:intron
ACTCGCCGAAATGGAGTTTA+AGG 0.210601 2.4:-62253466 MS.gene02928:CDS
AAATGTATGGCATGGGAAAC+TGG 0.255134 2.4:-62254754 MS.gene02928:CDS
TTGACTTCTAATATGAATTC+AGG 0.263830 2.4:-62253944 MS.gene02928:intron
AACGTTTGTGCTGCGATTTA+AGG 0.269280 2.4:-62252597 MS.gene02928:CDS
AAATCCTTCTCAAATGGATT+TGG 0.279560 2.4:+62253200 None:intergenic
TCAATACATAAGTCAAAATC+TGG 0.298397 2.4:+62255529 None:intergenic
GCATGAACATGTCATATTTC+CGG 0.301157 2.4:+62253153 None:intergenic
TCAGCATCATTATCATATTC+AGG 0.301408 2.4:+62253495 None:intergenic
GAAAAGAATTCAAGAGCTTA+AGG 0.302238 2.4:-62253066 MS.gene02928:intron
AACCAAAAGGCATCCAATAA+AGG 0.306706 2.4:-62253786 MS.gene02928:CDS
TGCTGCGCATTTATTCAAAA+AGG 0.307711 2.4:-62253404 MS.gene02928:intron
AAGAAATGAAGGCCCTTCTT+TGG 0.309899 2.4:-62253559 MS.gene02928:CDS
GCCCTTTATTGGATGCCTTT+TGG 0.311044 2.4:+62253784 None:intergenic
ACAAAAGCAATCATTCTTAC+AGG 0.313342 2.4:-62255474 MS.gene02928:CDS
TGGTCCTGGAATTGTTAAAA+TGG 0.329731 2.4:-62253751 MS.gene02928:CDS
TTTGGAACCCCGTGATTGTT+CGG 0.334438 2.4:+62252824 None:intergenic
CTCCCCGTTCTTCCCTCTTC+CGG 0.336302 2.4:-62254657 MS.gene02928:intron
TCCCTCTCATTTGCCCAGAC+TGG 0.349166 2.4:-62254949 MS.gene02928:CDS
TCTGGAGACATTAATGCATT+TGG 0.356050 2.4:+62252806 None:intergenic
TCATCATCTGCATTCCAGTC+TGG 0.356882 2.4:+62254935 None:intergenic
TTGGAACCCCGTGATTGTTC+GGG 0.365263 2.4:+62252825 None:intergenic
ATGCTCATTAAGAAGGGAAT+TGG 0.386721 2.4:-62252439 MS.gene02928:CDS
CAGCCTTACTTGACTCTAGA+TGG 0.387712 2.4:+62254074 None:intergenic
ATGGATGCAACTGGATACTA+TGG 0.389391 2.4:-62252740 MS.gene02928:CDS
CTCTTGCATCTTCAGATAAA+CGG 0.389633 2.4:+62252564 None:intergenic
GTCAAGTTCTGTCAATGAAA+TGG 0.399893 2.4:-62252759 MS.gene02928:CDS
GGTGTTAAATCCTTCTCAAA+TGG 0.404781 2.4:+62253194 None:intergenic
AGTGGAGATAATTCAGAATC+TGG 0.407331 2.4:-62256596 MS.gene02928:CDS
TACTGTAATAAAGATATTAC+AGG 0.419202 2.4:-62255580 MS.gene02928:CDS
TAGGACATGTCTCATGTTGT+TGG 0.423324 2.4:-62254547 MS.gene02928:CDS
ATACCGGAAGAGGGAAGAAC+GGG 0.423481 2.4:+62254654 None:intergenic
ATGGAAGATTCCAACAAATC+TGG 0.423508 2.4:-62253980 MS.gene02928:CDS
AATTCAGAATCTGGAGTTGC+AGG 0.426709 2.4:-62256587 MS.gene02928:intron
GCCAGTGGAACCAGATTTGT+TGG 0.430345 2.4:+62253970 None:intergenic
AGAACTTGACCCTGCAGGTC+TGG 0.440690 2.4:+62252772 None:intergenic
ATATTGTAGGGTCAGATTCT+GGG 0.444203 2.4:-62253842 MS.gene02928:intron
CTTGACTCTAGATGGAGAAA+AGG 0.444237 2.4:+62254082 None:intergenic
AAGCATGCATAGAACACTAT+AGG 0.446368 2.4:-62254694 MS.gene02928:CDS
GTCAATGAAATGGATGCAAC+TGG 0.450262 2.4:-62252749 MS.gene02928:CDS
CATCATCTGCATTCCAGTCT+GGG 0.453025 2.4:+62254936 None:intergenic
GGTCTGGTACCAGCAGAGTC+TGG 0.454618 2.4:+62252788 None:intergenic
GTTCATGCGCTTTCATACTA+AGG 0.455273 2.4:-62253138 MS.gene02928:CDS
CATGGGAGATCTTAGCATAA+AGG 0.456713 2.4:-62254114 MS.gene02928:CDS
CTATCTGTACAAATGATTGC+TGG 0.459385 2.4:-62252538 MS.gene02928:CDS
AGTGTCCTTAAACTCCATTT+CGG 0.467485 2.4:+62253461 None:intergenic
ACCAAAAGGCATCCAATAAA+GGG 0.468979 2.4:-62253785 MS.gene02928:CDS
TCTTGCCATGGCGAAAGGGC+AGG 0.472164 2.4:-62254506 MS.gene02928:CDS
ATGTGGTCCCGAACAATCAC+GGG 0.473554 2.4:-62252832 MS.gene02928:CDS
CCTCCAAAATCTCTGTCCAT+TGG 0.475110 2.4:+62253600 None:intergenic
CAGCAATCATTTGTACAGAT+AGG 0.483057 2.4:+62252539 None:intergenic
TGGATACCATCAAAATTGAC+AGG 0.484436 2.4:-62252471 MS.gene02928:CDS
TGTGAGTCAGGTCAAGGAGC+AGG 0.487841 2.4:-62255634 MS.gene02928:intron
AGGACATGTCTCATGTTGTT+GGG 0.493324 2.4:-62254546 MS.gene02928:CDS
TGCAGCTAGTGCTAACCAAA+AGG 0.494192 2.4:-62253799 MS.gene02928:CDS
AAGGAGCAGGTGAAGCGAAA+AGG 0.494331 2.4:-62255621 MS.gene02928:CDS
TCGCAGGAAGCTCGTGCTGC+TGG 0.496946 2.4:-62252947 MS.gene02928:intron
AACTTCTTGCCATGGCGAAA+GGG 0.496960 2.4:-62254510 MS.gene02928:CDS
GTATGATATGCTCATTAAGA+AGG 0.500449 2.4:-62252446 MS.gene02928:CDS
AGTTGAAGCAGATAGATATC+TGG 0.502448 2.4:-62252912 MS.gene02928:CDS
TGGTTATAACGCGAAAAGAC+AGG 0.504452 2.4:-62253526 MS.gene02928:CDS
GGCACATGGCACACTTGATA+CGG 0.505024 2.4:+62255551 None:intergenic
CCACTGATTTCAACCAAAGA+AGG 0.505240 2.4:+62253546 None:intergenic
TGAGCAATTACTCGCCGAAA+TGG 0.506718 2.4:-62253475 MS.gene02928:CDS
CCAAATTCCTCAAGAAATGA+AGG 0.508733 2.4:-62253570 MS.gene02928:CDS
AAAGCCTGACATACCGGAAG+AGG 0.510365 2.4:+62254644 None:intergenic
AGGAGCAGGTGAAGCGAAAA+GGG 0.511931 2.4:-62255620 MS.gene02928:CDS
TTGACTCTAGATGGAGAAAA+GGG 0.511968 2.4:+62254083 None:intergenic
TCCAACAAATCTGGTTCCAC+TGG 0.512061 2.4:-62253971 MS.gene02928:CDS
AAAGGCATCCAATAAAGGGC+GGG 0.512200 2.4:-62253781 MS.gene02928:CDS
GAACTTCTTGCCATGGCGAA+AGG 0.516288 2.4:-62254511 MS.gene02928:CDS
ATCTTCAGATAAACGGTTGG+AGG 0.520579 2.4:+62252571 None:intergenic
GGGAATAGAAATGTATGGCA+TGG 0.523916 2.4:-62254762 MS.gene02928:CDS
AGTCCTATGTTCAGAGATAA+CGG 0.524266 2.4:+62253091 None:intergenic
CTCACCCTGCCCTTTCGCCA+TGG 0.527521 2.4:+62254501 None:intergenic
TTGACAGAACTTGACCCTGC+AGG 0.529299 2.4:+62252767 None:intergenic
CTTTATGCTAAGATCTCCCA+TGG 0.535543 2.4:+62254115 None:intergenic
CTTGCCATGGCGAAAGGGCA+GGG 0.537534 2.4:-62254505 MS.gene02928:CDS
AGAAGGGCCTTCATTTCTTG+AGG 0.537872 2.4:+62253563 None:intergenic
TCTGCTGGTACCAGACCTGC+AGG 0.542235 2.4:-62252782 MS.gene02928:CDS
AATTCATATTAGAAGTCAAA+CGG 0.543584 2.4:+62253948 None:intergenic
GGAATAGAAATGTATGGCAT+GGG 0.547477 2.4:-62254761 MS.gene02928:CDS
TGCATCTTCAGATAAACGGT+TGG 0.547701 2.4:+62252568 None:intergenic
CCTTCTTTGGTTGAAATCAG+TGG 0.553653 2.4:-62253546 MS.gene02928:CDS
TTAATGTCTCCAGACTCTGC+TGG 0.560448 2.4:-62252797 MS.gene02928:CDS
AATGTATGGCATGGGAAACT+GGG 0.562064 2.4:-62254753 MS.gene02928:CDS
TTATCCAAATCCATTTGAGA+AGG 0.565094 2.4:-62253204 MS.gene02928:CDS
CATGTGGTCCCGAACAATCA+CGG 0.569260 2.4:-62252833 MS.gene02928:CDS
TCATCAAATGTTCAAGAATG+TGG 0.572296 2.4:-62252491 MS.gene02928:CDS
GCAGCATGTGTGTTGACTGA+GGG 0.575476 2.4:+62253819 None:intergenic
CAATCATTCTTACAGGGTCA+TGG 0.577318 2.4:-62255467 MS.gene02928:intron
CATGGCGAAAGGGCAGGGTG+AGG 0.578638 2.4:-62254500 MS.gene02928:CDS
TCCAGTCTGGGCAAATGAGA+GGG 0.584062 2.4:+62254948 None:intergenic
AAGGCATCCAATAAAGGGCG+GGG 0.585408 2.4:-62253780 MS.gene02928:CDS
GTCATTGACAGATTCTCCAA+TGG 0.586027 2.4:-62253616 MS.gene02928:intron
AGAAAGAAGAATGCTGCAAG+TGG 0.586362 2.4:-62256614 MS.gene02928:CDS
CATACCGGAAGAGGGAAGAA+CGG 0.589060 2.4:+62254653 None:intergenic
TTCCAGTCTGGGCAAATGAG+AGG 0.590859 2.4:+62254947 None:intergenic
TATGATATGCTCATTAAGAA+GGG 0.593230 2.4:-62252445 MS.gene02928:CDS
AGGCATCCAATAAAGGGCGG+GGG 0.596003 2.4:-62253779 MS.gene02928:CDS
CCGAGGAAAAGTCAATATGC+CGG 0.597275 2.4:-62253172 MS.gene02928:CDS
GATTGTAACAGGACTTCCCA+TGG 0.597457 2.4:-62254132 MS.gene02928:intron
CACTGATTTCAACCAAAGAA+GGG 0.597471 2.4:+62253547 None:intergenic
CAGAAAAGAACTTCTTGCCA+TGG 0.598444 2.4:-62254518 MS.gene02928:CDS
CAATACATAAGTCAAAATCT+GGG 0.604695 2.4:+62255530 None:intergenic
GGGCAGGGTGAGGACAAGAA+AGG 0.604928 2.4:-62254490 MS.gene02928:intron
TCTGGCGCATAAGAGAAGAA+AGG 0.605068 2.4:-62252894 MS.gene02928:CDS
GCAGAAGTTGCTGAGCATGT+TGG 0.605076 2.4:-62254731 MS.gene02928:CDS
GAACCGTTATCTCTGAACAT+AGG 0.607443 2.4:-62253094 MS.gene02928:CDS
TGCAGCATGTGTGTTGACTG+AGG 0.608763 2.4:+62253818 None:intergenic
CCTGGAATTGTTAAAATGGA+AGG 0.609692 2.4:-62253747 MS.gene02928:intron
AATTCAATGGGTCGTTCTCG+TGG 0.613358 2.4:-62256831 None:intergenic
ATTAGAAGTCAAACGGCCAG+TGG 0.615296 2.4:+62253955 None:intergenic
AGCGAGAGAAAGTGCTCATG+TGG 0.619340 2.4:-62252849 MS.gene02928:CDS
TAAGTCAAAATCTGGGCACA+TGG 0.621677 2.4:+62255537 None:intergenic
AAGCCTGACATACCGGAAGA+GGG 0.625173 2.4:+62254645 None:intergenic
CAAAAGCAATCATTCTTACA+GGG 0.631809 2.4:-62255473 MS.gene02928:CDS
TGAGAAGGATTTAACACCCG+AGG 0.635433 2.4:-62253189 MS.gene02928:CDS
CGTTTATCTGAAGATGCAAG+AGG 0.641805 2.4:-62252563 MS.gene02928:CDS
AAAAGGCATCCAATAAAGGG+CGG 0.652819 2.4:-62253782 MS.gene02928:CDS
GTTTAAGGACACTGACACTG+AGG 0.653964 2.4:-62253451 MS.gene02928:CDS
ATTGTAACAGGACTTCCCAT+GGG 0.663000 2.4:-62254131 MS.gene02928:intron
TAAGGACACTGACACTGAGG+AGG 0.663510 2.4:-62253448 MS.gene02928:CDS
TGATGAAAGAAAGCGCAGGA+AGG 0.670308 2.4:-62253252 MS.gene02928:CDS
ACGATGATGATCCAAGCCAA+AGG 0.670643 2.4:-62256794 MS.gene02928:intron
TTTATGCTAAGATCTCCCAT+GGG 0.680782 2.4:+62254116 None:intergenic
GGCTTGATGAAAGAAAGCGC+AGG 0.689974 2.4:-62253256 MS.gene02928:CDS
CTGCTGGTACCAGACCTGCA+GGG 0.707483 2.4:-62252781 MS.gene02928:CDS
GGATACCATCAAAATTGACA+GGG 0.710009 2.4:-62252470 MS.gene02928:CDS
TATCTGCTTCAACTGAACTG+CGG 0.712712 2.4:+62252921 None:intergenic
TACCGGAAGAGGGAAGAACG+GGG 0.721077 2.4:+62254655 None:intergenic
TGTGGTCCCGAACAATCACG+GGG 0.753110 2.4:-62252831 MS.gene02928:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATAAATAATATTTAAAGA+TGG + chr2.4:62252925-62252944 None:intergenic 10.0%
!! TATATTGTTTATATATTGTA+GGG - chr2.4:62255400-62255419 MS.gene02928:intron 10.0%
!! ATTGAAAGGAAATTATAATT+GGG + chr2.4:62255377-62255396 None:intergenic 15.0%
!! CTATATTGTTTATATATTGT+AGG - chr2.4:62255399-62255418 MS.gene02928:intron 15.0%
!! GAAAAATATAAACTTTAACT+TGG + chr2.4:62252903-62252922 None:intergenic 15.0%
!! TATCATATTCGTTTATATAA+AGG - chr2.4:62254655-62254674 MS.gene02928:intron 15.0%
!! TATTATAATCTATGATTCTA+TGG - chr2.4:62255002-62255021 MS.gene02928:intron 15.0%
!!! ATATGATAAAGCATTATATT+TGG - chr2.4:62254409-62254428 MS.gene02928:intron 15.0%
!!! CTTTTCTTATTATTGTAATT+GGG - chr2.4:62252499-62252518 MS.gene02928:CDS 15.0%
!!! GATATTAAGAATTTTGTATT+CGG + chr2.4:62253391-62253410 None:intergenic 15.0%
!!! TCTATATCAGTTTTTTAATA+CGG - chr2.4:62254255-62254274 MS.gene02928:intron 15.0%
!!! TCTTTTCTTATTATTGTAAT+TGG - chr2.4:62252498-62252517 MS.gene02928:CDS 15.0%
!! AATTCATATTAGAAGTCAAA+CGG + chr2.4:62255309-62255328 None:intergenic 20.0%
!! ACATTCTTCTTTATAAATAC+TGG - chr2.4:62255091-62255110 MS.gene02928:intron 20.0%
!! ACTAAAGTTAAAGACTTATA+TGG + chr2.4:62253051-62253070 None:intergenic 20.0%
!! AGAAACCTATAAAACTAAAA+TGG + chr2.4:62255883-62255902 None:intergenic 20.0%
!! AGGCATTATTATTTATTGTT+TGG + chr2.4:62254935-62254954 None:intergenic 20.0%
!! ATAACTGCTAAAATATGTTT+CGG - chr2.4:62254969-62254988 MS.gene02928:intron 20.0%
!! ATGAATAAAAATCAAACCTT+TGG + chr2.4:62252479-62252498 None:intergenic 20.0%
!! CTCAAAATCATAAACAATAA+TGG - chr2.4:62255921-62255940 MS.gene02928:intron 20.0%
!! GATTGAAAGGAAATTATAAT+TGG + chr2.4:62255378-62255397 None:intergenic 20.0%
!! TAAACAATATAGAGATTGAA+AGG + chr2.4:62255391-62255410 None:intergenic 20.0%
!! TACTGTAATAAAGATATTAC+AGG - chr2.4:62253674-62253693 MS.gene02928:intron 20.0%
!! TAGATGACAATGTAATTTAA+GGG + chr2.4:62253368-62253387 None:intergenic 20.0%
!! TATCTATAAGAGAAACTATT+TGG - chr2.4:62254101-62254120 MS.gene02928:CDS 20.0%
!! TATGTTTAATAAGACATCAA+AGG + chr2.4:62253840-62253859 None:intergenic 20.0%
!!! AATATAAACTTTAACTTGGA+TGG + chr2.4:62252899-62252918 None:intergenic 20.0%
!!! ACGTTTTTCAATTTAAAGAT+AGG + chr2.4:62255974-62255993 None:intergenic 20.0%
!!! ATGTTTGATAATAATTTTCC+TGG - chr2.4:62253592-62253611 MS.gene02928:CDS 20.0%
! AACTATTTGGAAAGATTTAG+AGG - chr2.4:62254114-62254133 MS.gene02928:CDS 25.0%
! AATGTAATTTAAGGGATGTT+TGG + chr2.4:62253360-62253379 None:intergenic 25.0%
! AGGAAAACATTTGAAAGTAA+TGG + chr2.4:62253820-62253839 None:intergenic 25.0%
! ATACAATTAACCAAGTACAA+TGG + chr2.4:62252714-62252733 None:intergenic 25.0%
! ATAGCATACTGTTATAAATC+AGG - chr2.4:62254856-62254875 MS.gene02928:intron 25.0%
! CAATACATAAGTCAAAATCT+GGG + chr2.4:62253727-62253746 None:intergenic 25.0%
! CATCAACTTATTCAGTTATA+CGG + chr2.4:62253417-62253436 None:intergenic 25.0%
! GAATGTCGATAAGAATTTAA+TGG + chr2.4:62256229-62256248 None:intergenic 25.0%
! GTAGATGACAATGTAATTTA+AGG + chr2.4:62253369-62253388 None:intergenic 25.0%
! TATGATATGCTCATTAAGAA+GGG - chr2.4:62256809-62256828 MS.gene02928:CDS 25.0%
! TCAATACATAAGTCAAAATC+TGG + chr2.4:62253728-62253747 None:intergenic 25.0%
! TTCCAAGTAGAGAAAAAAAA+AGG + chr2.4:62256251-62256270 None:intergenic 25.0%
! TTGACTTCTAATATGAATTC+AGG - chr2.4:62255310-62255329 MS.gene02928:intron 25.0%
! TTGGTTTAAATTAATTGCCT+AGG - chr2.4:62254362-62254381 MS.gene02928:intron 25.0%
! TTTAAATTGAAAAACGTTGC+AGG - chr2.4:62255977-62255996 MS.gene02928:intron 25.0%
! TTTCATTCTTTAGCGAAAAA+TGG + chr2.4:62253494-62253513 None:intergenic 25.0%
!! TAATGCAATTTTCATAACAG+CGG + chr2.4:62254037-62254056 None:intergenic 25.0%
!!! AACAGCCATTTTAGTTTTAT+AGG - chr2.4:62255875-62255894 MS.gene02928:intron 25.0%
!!! AGCAACAAATTTTTGGTTTT+AGG - chr2.4:62254471-62254490 MS.gene02928:intron 25.0%
!!! ATTAGTTTCTGTAGTTTTTG+GGG - chr2.4:62254814-62254833 MS.gene02928:intron 25.0%
!!! ATTGTTTATGATTTTGAGTG+TGG + chr2.4:62255919-62255938 None:intergenic 25.0%
!!! ATTTTGTTTTCTGAAACCAT+CGG - chr2.4:62256614-62256633 MS.gene02928:CDS 25.0%
!!! CATTAGTTTCTGTAGTTTTT+GGG - chr2.4:62254813-62254832 MS.gene02928:intron 25.0%
!!! CTTTTCTAGCAACAAATTTT+TGG - chr2.4:62254464-62254483 MS.gene02928:intron 25.0%
!!! GCAACAAATTTTTGGTTTTA+GGG - chr2.4:62254472-62254491 MS.gene02928:intron 25.0%
!!! TCATTAGTTTCTGTAGTTTT+TGG - chr2.4:62254812-62254831 MS.gene02928:intron 25.0%
!!! TTCCTTTTTTTTTCTCTACT+TGG - chr2.4:62256246-62256265 MS.gene02928:intron 25.0%
!!! TTCTAAATGTTGATTCAGAA+TGG - chr2.4:62255255-62255274 MS.gene02928:intron 25.0%
!!! TTTTAGGGAATAGAAATGTA+TGG - chr2.4:62254487-62254506 MS.gene02928:intron 25.0%
ACAAAAGCAATCATTCTTAC+AGG - chr2.4:62253780-62253799 MS.gene02928:CDS 30.0%
AGCAATGATAACAACAATGT+CGG + chr2.4:62254072-62254091 None:intergenic 30.0%
AGCATTGTGTAATGTCAATT+GGG + chr2.4:62255559-62255578 None:intergenic 30.0%
AGTTATCAGCAACATAAATG+AGG + chr2.4:62254955-62254974 None:intergenic 30.0%
ATAGATACAGTAAAATGCTG+TGG - chr2.4:62252573-62252592 MS.gene02928:CDS 30.0%
ATCACTCTGAGTTTAATTAC+AGG - chr2.4:62253915-62253934 MS.gene02928:intron 30.0%
ATGCTTTCAACTATATGTGT+AGG - chr2.4:62252611-62252630 MS.gene02928:intron 30.0%
CAAAAGCAATCATTCTTACA+GGG - chr2.4:62253781-62253800 MS.gene02928:CDS 30.0%
CATGTCCTAGTAAATAAGAA+TGG + chr2.4:62254696-62254715 None:intergenic 30.0%
CATTTAGAAGTCAATCAACA+TGG + chr2.4:62255244-62255263 None:intergenic 30.0%
CGGTTTATGATAGAACATTA+TGG - chr2.4:62254158-62254177 MS.gene02928:intron 30.0%
GAAAAGAATTCAAGAGCTTA+AGG - chr2.4:62256188-62256207 MS.gene02928:intron 30.0%
GATTTCTAAGCTACAAATTG+TGG + chr2.4:62253117-62253136 None:intergenic 30.0%
GTATGATATGCTCATTAAGA+AGG - chr2.4:62256808-62256827 MS.gene02928:CDS 30.0%
GTTCTATCATAAACCGTATT+TGG + chr2.4:62254154-62254173 None:intergenic 30.0%
TAAAAATCAAACCTTTGGCT+TGG + chr2.4:62252474-62252493 None:intergenic 30.0%
TAACCTTTCGATTGATCAAA+AGG + chr2.4:62253864-62253883 None:intergenic 30.0%
TCAGCATCATTATCATATTC+AGG + chr2.4:62255762-62255781 None:intergenic 30.0%
TCATCAAATGTTCAAGAATG+TGG - chr2.4:62256763-62256782 MS.gene02928:intron 30.0%
TCCAAAAGAAGTGATAAATG+AGG + chr2.4:62254886-62254905 None:intergenic 30.0%
TTATCCAAATCCATTTGAGA+AGG - chr2.4:62256050-62256069 MS.gene02928:intron 30.0%
! AAATCCTTCTCAAATGGATT+TGG + chr2.4:62256057-62256076 None:intergenic 30.0%
! AATCAACATGGTATTGAACA+TGG + chr2.4:62255232-62255251 None:intergenic 30.0%
! TAACCTTTTGATCAATCGAA+AGG - chr2.4:62253858-62253877 MS.gene02928:intron 30.0%
! TGATGAAATTTTGCTTCTAG+AGG - chr2.4:62254336-62254355 MS.gene02928:intron 30.0%
!! GAAGGTGTGCATTTTATATT+TGG - chr2.4:62255525-62255544 MS.gene02928:CDS 30.0%
!! GTAAGAATGATTGCTTTTGT+GGG + chr2.4:62253780-62253799 None:intergenic 30.0%
!! TAAGAATGATTGCTTTTGTG+GGG + chr2.4:62253779-62253798 None:intergenic 30.0%
!! TGTAAGAATGATTGCTTTTG+TGG + chr2.4:62253781-62253800 None:intergenic 30.0%
!!! ACAGTTTTAGAATGCAAACT+TGG + chr2.4:62256582-62256601 None:intergenic 30.0%
!!! TGATTGGTTGGTTTTTGTTT+TGG - chr2.4:62255040-62255059 MS.gene02928:intron 30.0%
AAAATCGATGAATGCAAAGG+TGG + chr2.4:62252972-62252991 None:intergenic 35.0%
AAGCATGCATAGAACACTAT+AGG - chr2.4:62254560-62254579 MS.gene02928:intron 35.0%
AATTAATTGCCTAGGAGTAG+CGG - chr2.4:62254370-62254389 MS.gene02928:intron 35.0%
AGAAACTGTAACCGTATGTT+TGG - chr2.4:62253307-62253326 MS.gene02928:intron 35.0%
AGATTTAGAGGTTAACGAGT+TGG - chr2.4:62254126-62254145 MS.gene02928:intron 35.0%
AGTCCTATGTTCAGAGATAA+CGG + chr2.4:62256166-62256185 None:intergenic 35.0%
AGTGGAGATAATTCAGAATC+TGG - chr2.4:62252658-62252677 MS.gene02928:intron 35.0%
AGTGTCCTTAAACTCCATTT+CGG + chr2.4:62255796-62255815 None:intergenic 35.0%
AGTTGAAGCAGATAGATATC+TGG - chr2.4:62256342-62256361 MS.gene02928:intron 35.0%
ATATTGTAGGGTCAGATTCT+GGG - chr2.4:62255412-62255431 MS.gene02928:intron 35.0%
ATCGAAGTGTAGGTTTGAAA+CGG - chr2.4:62253330-62253349 MS.gene02928:intron 35.0%
ATGCTCATTAAGAAGGGAAT+TGG - chr2.4:62256815-62256834 MS.gene02928:CDS 35.0%
ATGGAAGATTCCAACAAATC+TGG - chr2.4:62255274-62255293 MS.gene02928:intron 35.0%
CACAAAATCGATGAATGCAA+AGG + chr2.4:62252975-62252994 None:intergenic 35.0%
CAGCAATCATTTGTACAGAT+AGG + chr2.4:62256718-62256737 None:intergenic 35.0%
CAGCATTGTGTAATGTCAAT+TGG + chr2.4:62255560-62255579 None:intergenic 35.0%
CCAAATTCCTCAAGAAATGA+AGG - chr2.4:62255684-62255703 MS.gene02928:intron 35.0%
CCTGGAATTGTTAAAATGGA+AGG - chr2.4:62255507-62255526 MS.gene02928:CDS 35.0%
CCTTCATTTCTTGAGGAATT+TGG + chr2.4:62255687-62255706 None:intergenic 35.0%
CTATCATGTACCATTGTACT+TGG - chr2.4:62252701-62252720 MS.gene02928:intron 35.0%
CTATCTGTACAAATGATTGC+TGG - chr2.4:62256716-62256735 MS.gene02928:intron 35.0%
CTCTTGCATCTTCAGATAAA+CGG + chr2.4:62256693-62256712 None:intergenic 35.0%
CTGTCAATGACAAAAGAACT+AGG + chr2.4:62255629-62255648 None:intergenic 35.0%
GACAAATTATCCTGACAACA+AGG + chr2.4:62254283-62254302 None:intergenic 35.0%
GCATGAACATGTCATATTTC+CGG + chr2.4:62256104-62256123 None:intergenic 35.0%
GGAATAGAAATGTATGGCAT+GGG - chr2.4:62254493-62254512 MS.gene02928:CDS 35.0%
GGATACCATCAAAATTGACA+GGG - chr2.4:62256784-62256803 MS.gene02928:intron 35.0%
GGTGTTAAATCCTTCTCAAA+TGG + chr2.4:62256063-62256082 None:intergenic 35.0%
GTCAAGTTCTGTCAATGAAA+TGG - chr2.4:62256495-62256514 MS.gene02928:intron 35.0%
GTTGATGTTGACAGTTGTAA+TGG - chr2.4:62253430-62253449 MS.gene02928:CDS 35.0%
TACACTTCGATCCAAACATA+CGG + chr2.4:62253321-62253340 None:intergenic 35.0%
TATATTGTAGGGTCAGATTC+TGG - chr2.4:62255411-62255430 MS.gene02928:intron 35.0%
TATTCAAACAAACACTCCAC+AGG + chr2.4:62253460-62253479 None:intergenic 35.0%
TCAACTATATGTGTAGGTCA+AGG - chr2.4:62252617-62252636 MS.gene02928:intron 35.0%
TCTGGAGACATTAATGCATT+TGG + chr2.4:62256451-62256470 None:intergenic 35.0%
TGCTGCGCATTTATTCAAAA+AGG - chr2.4:62255850-62255869 MS.gene02928:intron 35.0%
TGGATACCATCAAAATTGAC+AGG - chr2.4:62256783-62256802 MS.gene02928:intron 35.0%
TGGTCCTGGAATTGTTAAAA+TGG - chr2.4:62255503-62255522 MS.gene02928:CDS 35.0%
TGGTTACTTGTGATTGTAAC+AGG - chr2.4:62255111-62255130 MS.gene02928:intron 35.0%
TTGACTCTAGATGGAGAAAA+GGG + chr2.4:62255174-62255193 None:intergenic 35.0%
TTTATGCTAAGATCTCCCAT+GGG + chr2.4:62255141-62255160 None:intergenic 35.0%
! ATACACCCTGTCAATTTTGA+TGG + chr2.4:62256792-62256811 None:intergenic 35.0%
! CAATTTTCATAACAGCGGTT+TGG + chr2.4:62254032-62254051 None:intergenic 35.0%
! GCCTCATTTATCACTTCTTT+TGG - chr2.4:62254882-62254901 MS.gene02928:intron 35.0%
! GCTGACCATTCTTATTTACT+AGG - chr2.4:62254688-62254707 MS.gene02928:CDS 35.0%
! GTATTGAGTGCTTTTCTGTT+GGG - chr2.4:62253741-62253760 MS.gene02928:intron 35.0%
! TAACGAGTTGGATCCAAATA+CGG - chr2.4:62254138-62254157 MS.gene02928:intron 35.0%
! TATTGAGTGCTTTTCTGTTG+GGG - chr2.4:62253742-62253761 MS.gene02928:intron 35.0%
! TGTATTGAGTGCTTTTCTGT+TGG - chr2.4:62253740-62253759 MS.gene02928:intron 35.0%
!! AACCAAAAGGCATCCAATAA+AGG - chr2.4:62255468-62255487 MS.gene02928:CDS 35.0%
!! ACCAAAAGGCATCCAATAAA+GGG - chr2.4:62255469-62255488 MS.gene02928:CDS 35.0%
!! CACTGATTTCAACCAAAGAA+GGG + chr2.4:62255710-62255729 None:intergenic 35.0%
!! CCTTCCATTTTAACAATTCC+AGG + chr2.4:62255510-62255529 None:intergenic 35.0%
!! TACACAATGCTGATTCTTTG+AGG - chr2.4:62255568-62255587 MS.gene02928:CDS 35.0%
!!! ATTTTGCTTCTAGAGGTACT+TGG - chr2.4:62254343-62254362 MS.gene02928:intron 35.0%
AAATGTATGGCATGGGAAAC+TGG - chr2.4:62254500-62254519 MS.gene02928:CDS 40.0%
AACGTTTGTGCTGCGATTTA+AGG - chr2.4:62256657-62256676 MS.gene02928:intron 40.0%
AAGAAATGAAGGCCCTTCTT+TGG - chr2.4:62255695-62255714 MS.gene02928:intron 40.0%
AATGTATGGCATGGGAAACT+GGG - chr2.4:62254501-62254520 MS.gene02928:CDS 40.0%
AATTGTGGACAATTCCAACG+TGG + chr2.4:62253102-62253121 None:intergenic 40.0%
ACTAAGTGGAGTTAGCTACA+TGG + chr2.4:62254195-62254214 None:intergenic 40.0%
AGAAAGAAGAATGCTGCAAG+TGG - chr2.4:62252640-62252659 MS.gene02928:intron 40.0%
AGCTTCGAAATTATCACCGT+GGG - chr2.4:62253269-62253288 MS.gene02928:intron 40.0%
AGGACATGTCTCATGTTGTT+GGG - chr2.4:62254708-62254727 MS.gene02928:CDS 40.0%
ATCTTCAGATAAACGGTTGG+AGG + chr2.4:62256686-62256705 None:intergenic 40.0%
ATGGATGCAACTGGATACTA+TGG - chr2.4:62256514-62256533 MS.gene02928:intron 40.0%
ATGTAGCTAACTCCACTTAG+TGG - chr2.4:62254194-62254213 MS.gene02928:intron 40.0%
ATGTTGACAGTTGTAATGGC+AGG - chr2.4:62253434-62253453 MS.gene02928:CDS 40.0%
ATTGTAACAGGACTTCCCAT+GGG - chr2.4:62255123-62255142 MS.gene02928:intron 40.0%
CAATCATTCTTACAGGGTCA+TGG - chr2.4:62253787-62253806 MS.gene02928:CDS 40.0%
CAGAAAAGAACTTCTTGCCA+TGG - chr2.4:62254736-62254755 MS.gene02928:CDS 40.0%
CATGGGAGATCTTAGCATAA+AGG - chr2.4:62255140-62255159 MS.gene02928:intron 40.0%
CCTTCTTTGGTTGAAATCAG+TGG - chr2.4:62255708-62255727 MS.gene02928:intron 40.0%
CGTTTATCTGAAGATGCAAG+AGG - chr2.4:62256691-62256710 MS.gene02928:intron 40.0%
CTTCATGTGTACATGTTCAG+TGG - chr2.4:62253199-62253218 MS.gene02928:CDS 40.0%
CTTGACTCTAGATGGAGAAA+AGG + chr2.4:62255175-62255194 None:intergenic 40.0%
CTTTATGCTAAGATCTCCCA+TGG + chr2.4:62255142-62255161 None:intergenic 40.0%
GAACCGTTATCTCTGAACAT+AGG - chr2.4:62256160-62256179 MS.gene02928:intron 40.0%
GGGAATAGAAATGTATGGCA+TGG - chr2.4:62254492-62254511 MS.gene02928:CDS 40.0%
GTATGTTTGGATCGAAGTGT+AGG - chr2.4:62253320-62253339 MS.gene02928:intron 40.0%
GTCAATGAAATGGATGCAAC+TGG - chr2.4:62256505-62256524 MS.gene02928:intron 40.0%
GTCATTGACAGATTCTCCAA+TGG - chr2.4:62255638-62255657 MS.gene02928:intron 40.0%
GTTCATGCGCTTTCATACTA+AGG - chr2.4:62256116-62256135 MS.gene02928:intron 40.0%
TAACTCCACTTAGTGGGATA+AGG - chr2.4:62254201-62254220 MS.gene02928:intron 40.0%
TAAGTCAAAATCTGGGCACA+TGG + chr2.4:62253720-62253739 None:intergenic 40.0%
TAATTATCCTGCTAGACTGC+AGG - chr2.4:62253889-62253908 MS.gene02928:intron 40.0%
TAGCTTAGAAATCATCACCG+TGG - chr2.4:62253124-62253143 MS.gene02928:CDS 40.0%
TAGCTTCGAAATTATCACCG+TGG - chr2.4:62253268-62253287 MS.gene02928:intron 40.0%
TAGGACATGTCTCATGTTGT+TGG - chr2.4:62254707-62254726 MS.gene02928:CDS 40.0%
TATCTGCTTCAACTGAACTG+CGG + chr2.4:62256336-62256355 None:intergenic 40.0%
TATTTCGAATGCGAAACACG+TGG - chr2.4:62252857-62252876 MS.gene02928:CDS 40.0%
TCATTCAAAGCCTGACATAC+CGG + chr2.4:62254619-62254638 None:intergenic 40.0%
TGCATCTTCAGATAAACGGT+TGG + chr2.4:62256689-62256708 None:intergenic 40.0%
TGGTTATAACGCGAAAAGAC+AGG - chr2.4:62255728-62255747 MS.gene02928:intron 40.0%
TGTACTGTGTAACTGCACTA+TGG - chr2.4:62252749-62252768 MS.gene02928:CDS 40.0%
TGTAGCTAACTCCACTTAGT+GGG - chr2.4:62254195-62254214 MS.gene02928:intron 40.0%
TTAAATTCACCGCTACTCCT+AGG + chr2.4:62254382-62254401 None:intergenic 40.0%
! AATTCAGAATCTGGAGTTGC+AGG - chr2.4:62252667-62252686 MS.gene02928:intron 40.0%
! AGAGCTTAAGGTTTGAGACA+TGG - chr2.4:62256200-62256219 MS.gene02928:intron 40.0%
! CATTTGTTGAACATGATCGC+AGG - chr2.4:62256291-62256310 MS.gene02928:intron 40.0%
! GCTTCTGATTTTTCGCTGAT+TGG - chr2.4:62255024-62255043 MS.gene02928:intron 40.0%
! TAATACGGTTCCTTGTTGTC+AGG - chr2.4:62254270-62254289 MS.gene02928:intron 40.0%
! TCTCCAATGGACAGAGATTT+TGG - chr2.4:62255651-62255670 MS.gene02928:intron 40.0%
! TCTCCATCTAGAGTCAAGTA+AGG - chr2.4:62255177-62255196 MS.gene02928:intron 40.0%
!! AAAAGGCATCCAATAAAGGG+CGG - chr2.4:62255472-62255491 MS.gene02928:CDS 40.0%
!! ATTTTGAGTGTGGATGACTC+AGG + chr2.4:62255909-62255928 None:intergenic 40.0%
!! CCACTGATTTCAACCAAAGA+AGG + chr2.4:62255711-62255730 None:intergenic 40.0%
!! CTGATTTTTCGCTGATTGGT+TGG - chr2.4:62255028-62255047 MS.gene02928:intron 40.0%
!!! GTTTTTTGTGAGTCAGGTCA+AGG - chr2.4:62253614-62253633 MS.gene02928:intron 40.0%
!!! TTCCTGGTTTTTTGTGAGTC+AGG - chr2.4:62253608-62253627 MS.gene02928:CDS 40.0%
AACAATGTCGGCGAAACTAG+TGG + chr2.4:62254060-62254079 None:intergenic 45.0%
AACTTCTTGCCATGGCGAAA+GGG - chr2.4:62254744-62254763 MS.gene02928:CDS 45.0%
ACGATGATGATCCAAGCCAA+AGG - chr2.4:62252460-62252479 MS.gene02928:CDS 45.0%
ACTCGCCGAAATGGAGTTTA+AGG - chr2.4:62255788-62255807 MS.gene02928:intron 45.0%
AGAAGGGCCTTCATTTCTTG+AGG + chr2.4:62255694-62255713 None:intergenic 45.0%
ATTAGAAGTCAAACGGCCAG+TGG + chr2.4:62255302-62255321 None:intergenic 45.0%
CAGCCTTACTTGACTCTAGA+TGG + chr2.4:62255183-62255202 None:intergenic 45.0%
CATCATCTGCATTCCAGTCT+GGG + chr2.4:62254321-62254340 None:intergenic 45.0%
CCGAGGAAAAGTCAATATGC+CGG - chr2.4:62256082-62256101 MS.gene02928:intron 45.0%
CCTCCAAAATCTCTGTCCAT+TGG + chr2.4:62255657-62255676 None:intergenic 45.0%
GACCTGACTCACAAAAAACC+AGG + chr2.4:62253613-62253632 None:intergenic 45.0%
GATTGTAACAGGACTTCCCA+TGG - chr2.4:62255122-62255141 MS.gene02928:intron 45.0%
GTTTAAGGACACTGACACTG+AGG - chr2.4:62255803-62255822 MS.gene02928:intron 45.0%
TCATCATCTGCATTCCAGTC+TGG + chr2.4:62254322-62254341 None:intergenic 45.0%
TCCAACGTGGAAACAAACAC+AGG + chr2.4:62253089-62253108 None:intergenic 45.0%
TCTGGCGCATAAGAGAAGAA+AGG - chr2.4:62256360-62256379 MS.gene02928:intron 45.0%
TGAGAAGGATTTAACACCCG+AGG - chr2.4:62256065-62256084 MS.gene02928:intron 45.0%
TGAGCAATTACTCGCCGAAA+TGG - chr2.4:62255779-62255798 MS.gene02928:intron 45.0%
TGCAGCTAGTGCTAACCAAA+AGG - chr2.4:62255455-62255474 MS.gene02928:intron 45.0%
TGGATGGAAATCACCGTGTT+CGG + chr2.4:62252883-62252902 None:intergenic 45.0%
TTAATGTCTCCAGACTCTGC+TGG - chr2.4:62256457-62256476 MS.gene02928:intron 45.0%
! ATTATCACCGTGGGAAGTGT+CGG - chr2.4:62253278-62253297 MS.gene02928:intron 45.0%
! CCAATGGACAGAGATTTTGG+AGG - chr2.4:62255654-62255673 MS.gene02928:intron 45.0%
! GCAACAATTTTCTCGCATCC+TGG + chr2.4:62253158-62253177 None:intergenic 45.0%
! GCCCTTTATTGGATGCCTTT+TGG + chr2.4:62255473-62255492 None:intergenic 45.0%
! GTACACATGAAGTGCTTGTC+TGG + chr2.4:62253191-62253210 None:intergenic 45.0%
! TCCAACAAATCTGGTTCCAC+TGG - chr2.4:62255283-62255302 MS.gene02928:intron 45.0%
! TGATGAAAGAAAGCGCAGGA+AGG - chr2.4:62256002-62256021 MS.gene02928:intron 45.0%
! TTTGGAACCCCGTGATTGTT+CGG + chr2.4:62256433-62256452 None:intergenic 45.0%
!! AAAGGCATCCAATAAAGGGC+GGG - chr2.4:62255473-62255492 MS.gene02928:CDS 45.0%
!! TGTGTTGCTTGCTCTTCGTA+AGG - chr2.4:62252991-62253010 MS.gene02928:intron 45.0%
!!! CCGGCATATTGACTTTTCCT+CGG + chr2.4:62256085-62256104 None:intergenic 45.0%
!!! CGGCATATTGACTTTTCCTC+GGG + chr2.4:62256084-62256103 None:intergenic 45.0%
!!! CATTTTTATTTTATAAATAT+TGG - chr2.4:62255066-62255085 MS.gene02928:intron 5.0%
AAAGCCTGACATACCGGAAG+AGG + chr2.4:62254613-62254632 None:intergenic 50.0%
AAGCCTGACATACCGGAAGA+GGG + chr2.4:62254612-62254631 None:intergenic 50.0%
AAGGAGCAGGTGAAGCGAAA+AGG - chr2.4:62253633-62253652 MS.gene02928:intron 50.0%
AGGAGCAGGTGAAGCGAAAA+GGG - chr2.4:62253634-62253653 MS.gene02928:intron 50.0%
ATACCGGAAGAGGGAAGAAC+GGG + chr2.4:62254603-62254622 None:intergenic 50.0%
CAAAGGTGGCGACATGCAAT+TGG + chr2.4:62252958-62252977 None:intergenic 50.0%
CATACCGGAAGAGGGAAGAA+CGG + chr2.4:62254604-62254623 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCA+TGG - chr2.4:62254206-62254225 MS.gene02928:intron 50.0%
CCATGCCTTATCCCACTAAG+TGG + chr2.4:62254209-62254228 None:intergenic 50.0%
CTGGCAGAATTTACAGCCGA+TGG + chr2.4:62256633-62256652 None:intergenic 50.0%
GAACTTCTTGCCATGGCGAA+AGG - chr2.4:62254743-62254762 MS.gene02928:CDS 50.0%
GCAGAAGTTGCTGAGCATGT+TGG - chr2.4:62254523-62254542 MS.gene02928:CDS 50.0%
GCCAGTGGAACCAGATTTGT+TGG + chr2.4:62255287-62255306 None:intergenic 50.0%
GCCTGTGTTTGTTTCCACGT+TGG - chr2.4:62253085-62253104 MS.gene02928:CDS 50.0%
GGCACATGGCACACTTGATA+CGG + chr2.4:62253706-62253725 None:intergenic 50.0%
TAAGGACACTGACACTGAGG+AGG - chr2.4:62255806-62255825 MS.gene02928:intron 50.0%
TCCAGTCTGGGCAAATGAGA+GGG + chr2.4:62254309-62254328 None:intergenic 50.0%
TGATCAACCTGCAGTCTAGC+AGG + chr2.4:62253899-62253918 None:intergenic 50.0%
TTCCAGTCTGGGCAAATGAG+AGG + chr2.4:62254310-62254329 None:intergenic 50.0%
TTGACAGAACTTGACCCTGC+AGG + chr2.4:62256490-62256509 None:intergenic 50.0%
TTGGAACCCCGTGATTGTTC+GGG + chr2.4:62256432-62256451 None:intergenic 50.0%
! AAGGCATCCAATAAAGGGCG+GGG - chr2.4:62255474-62255493 MS.gene02928:CDS 50.0%
! CATCGGCTGTAAATTCTGCC+AGG - chr2.4:62256631-62256650 MS.gene02928:intron 50.0%
! GGCTTGATGAAAGAAAGCGC+AGG - chr2.4:62255998-62256017 MS.gene02928:intron 50.0%
!! AGCGAGAGAAAGTGCTCATG+TGG - chr2.4:62256405-62256424 MS.gene02928:intron 50.0%
!! GCAGCATGTGTGTTGACTGA+GGG + chr2.4:62255438-62255457 None:intergenic 50.0%
!! TGCAGCATGTGTGTTGACTG+AGG + chr2.4:62255439-62255458 None:intergenic 50.0%
!! TTATCACCGTGGGAAGTGTC+GGG - chr2.4:62253279-62253298 MS.gene02928:intron 50.0%
AATAAAGGGCGGGGGAAAGG+TGG - chr2.4:62255483-62255502 MS.gene02928:CDS 55.0%
ACCTTTCCCCCGCCCTTTAT+TGG + chr2.4:62255484-62255503 None:intergenic 55.0%
AGAACTTGACCCTGCAGGTC+TGG + chr2.4:62256485-62256504 None:intergenic 55.0%
AGGCATCCAATAAAGGGCGG+GGG - chr2.4:62255475-62255494 MS.gene02928:CDS 55.0%
ATCACCGTGGAATGTGTGCC+AGG - chr2.4:62253137-62253156 MS.gene02928:CDS 55.0%
CAGTTGTAATGGCAGGCCTG+TGG - chr2.4:62253441-62253460 MS.gene02928:CDS 55.0%
CGCAGCACAAACGTTTCTCC+TGG + chr2.4:62256652-62256671 None:intergenic 55.0%
CTTCCCTCTTCCGGTATGTC+AGG - chr2.4:62254606-62254625 MS.gene02928:intron 55.0%
GCATCCTGGCACACATTCCA+CGG + chr2.4:62253144-62253163 None:intergenic 55.0%
TACCGGAAGAGGGAAGAACG+GGG + chr2.4:62254602-62254621 None:intergenic 55.0%
TCCAATAAAGGGCGGGGGAA+AGG - chr2.4:62255480-62255499 MS.gene02928:CDS 55.0%
TCCCTCTCATTTGCCCAGAC+TGG - chr2.4:62254305-62254324 MS.gene02928:intron 55.0%
TGTGAGTCAGGTCAAGGAGC+AGG - chr2.4:62253620-62253639 MS.gene02928:intron 55.0%
! GTGCTTTTCTGTTGGGGCTG+AGG - chr2.4:62253748-62253767 MS.gene02928:CDS 55.0%
CTCCCCGTTCTTCCCTCTTC+CGG - chr2.4:62254597-62254616 MS.gene02928:intron 60.0%
CTGCTGGTACCAGACCTGCA+GGG - chr2.4:62256473-62256492 MS.gene02928:intron 60.0%
CTTGCCATGGCGAAAGGGCA+GGG - chr2.4:62254749-62254768 MS.gene02928:CDS 60.0%
GCGAAACACGTGGCCGAACA+CGG - chr2.4:62252867-62252886 MS.gene02928:CDS 60.0%
GGGCAGGGTGAGGACAAGAA+AGG - chr2.4:62254764-62254783 MS.gene02928:CDS 60.0%
GGTCTGGTACCAGCAGAGTC+TGG + chr2.4:62256469-62256488 None:intergenic 60.0%
TCGCATCCCGACACTTCCCA+CGG + chr2.4:62253288-62253307 None:intergenic 60.0%
TCTGCTGGTACCAGACCTGC+AGG - chr2.4:62256472-62256491 MS.gene02928:intron 60.0%
TCTTGCCATGGCGAAAGGGC+AGG - chr2.4:62254748-62254767 MS.gene02928:CDS 60.0%
CATGGCGAAAGGGCAGGGTG+AGG - chr2.4:62254754-62254773 MS.gene02928:CDS 65.0%
CTCACCCTGCCCTTTCGCCA+TGG + chr2.4:62254756-62254775 None:intergenic 65.0%
TCGCAGGAAGCTCGTGCTGC+TGG - chr2.4:62256307-62256326 MS.gene02928:intron 65.0%
GGGCGGGGGAAAGGTGGTCC+TGG - chr2.4:62255489-62255508 MS.gene02928:CDS 75.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 62252429 62256847 62252429 ID=MS.gene02928
chr2.4 mRNA 62252429 62256847 62252429 ID=MS.gene02928.t1;Parent=MS.gene02928
chr2.4 exon 62256795 62256847 62256795 ID=MS.gene02928.t1.exon1;Parent=MS.gene02928.t1
chr2.4 CDS 62256795 62256847 62256795 ID=cds.MS.gene02928.t1;Parent=MS.gene02928.t1
chr2.4 exon 62256588 62256643 62256588 ID=MS.gene02928.t1.exon2;Parent=MS.gene02928.t1
chr2.4 CDS 62256588 62256643 62256588 ID=cds.MS.gene02928.t1;Parent=MS.gene02928.t1
chr2.4 exon 62255468 62255646 62255468 ID=MS.gene02928.t1.exon3;Parent=MS.gene02928.t1
chr2.4 CDS 62255468 62255646 62255468 ID=cds.MS.gene02928.t1;Parent=MS.gene02928.t1
chr2.4 exon 62254919 62254984 62254919 ID=MS.gene02928.t1.exon4;Parent=MS.gene02928.t1
chr2.4 CDS 62254919 62254984 62254919 ID=cds.MS.gene02928.t1;Parent=MS.gene02928.t1
chr2.4 exon 62254658 62254783 62254658 ID=MS.gene02928.t1.exon5;Parent=MS.gene02928.t1
chr2.4 CDS 62254658 62254783 62254658 ID=cds.MS.gene02928.t1;Parent=MS.gene02928.t1
chr2.4 exon 62254491 62254566 62254491 ID=MS.gene02928.t1.exon6;Parent=MS.gene02928.t1
chr2.4 CDS 62254491 62254566 62254491 ID=cds.MS.gene02928.t1;Parent=MS.gene02928.t1
chr2.4 exon 62254083 62254143 62254083 ID=MS.gene02928.t1.exon7;Parent=MS.gene02928.t1
chr2.4 CDS 62254083 62254143 62254083 ID=cds.MS.gene02928.t1;Parent=MS.gene02928.t1
chr2.4 exon 62253945 62254003 62253945 ID=MS.gene02928.t1.exon8;Parent=MS.gene02928.t1
chr2.4 CDS 62253945 62254003 62253945 ID=cds.MS.gene02928.t1;Parent=MS.gene02928.t1
chr2.4 exon 62253748 62253855 62253748 ID=MS.gene02928.t1.exon9;Parent=MS.gene02928.t1
chr2.4 CDS 62253748 62253855 62253748 ID=cds.MS.gene02928.t1;Parent=MS.gene02928.t1
chr2.4 exon 62253405 62253627 62253405 ID=MS.gene02928.t1.exon10;Parent=MS.gene02928.t1
chr2.4 CDS 62253405 62253627 62253405 ID=cds.MS.gene02928.t1;Parent=MS.gene02928.t1
chr2.4 exon 62253067 62253277 62253067 ID=MS.gene02928.t1.exon11;Parent=MS.gene02928.t1
chr2.4 CDS 62253067 62253277 62253067 ID=cds.MS.gene02928.t1;Parent=MS.gene02928.t1
chr2.4 exon 62252718 62252963 62252718 ID=MS.gene02928.t1.exon12;Parent=MS.gene02928.t1
chr2.4 CDS 62252718 62252963 62252718 ID=cds.MS.gene02928.t1;Parent=MS.gene02928.t1
chr2.4 exon 62252429 62252623 62252429 ID=MS.gene02928.t1.exon13;Parent=MS.gene02928.t1
chr2.4 CDS 62252429 62252623 62252429 ID=cds.MS.gene02928.t1;Parent=MS.gene02928.t1
Gene Sequence

>MS.gene02928

ATGGGTCGTTCTCGTGGTAATTTTCATCATAACGATGATGATCCAAGCCAAAGGTTTGATTTTTATTCATCTTTTCTTATTATTGTAATTGGGTCATAATGTAATTGAATTTTGCACAATTTGTTTATCTAAATTTGATTGATCATAGATACAGTAAAATGCTGTGGTAATTTTGCTAAATGATGCTTTCAACTATATGTGTAGGTCAAGGAGAAAGAAGAATGCTGCAAGTGGAGATAATTCAGAATCTGGAGTTGCAGGTACTTTTTCAACTATCATGTACCATTGTACTTGGTTAATTGTATAATGCACTATGAAATTGTACTGTGTAACTGCACTATGGAGATATTGTTTCTAAAATTTAAATTTACTATGTTTACAAATCAAATAAAAAGTGAATAGATATAAGTATAATGAGAAATGTTGTATATTTCGAATGCGAAACACGTGGCCGAACACGGTGATTTCCATCCAAGTTAAAGTTTATATTTTTCCATCTTTAAATATTATTTATGTTGTTTAAAAACCAATTGCATGTCGCCACCTTTGCATTCATCGATTTTGTGTTGCTTGCTCTTCGTAAGGAGTAGCATAGCTCTTAGTATAATATATATTCGTACCATATAAGTCTTTAACTTTAGTGTATTATAAAATTAGCCTGTGTTTGTTTCCACGTTGGAATTGTCCACAATTTGTAGCTTAGAAATCATCACCGTGGAATGTGTGCCAGGATGCGAGAAAATTGTTGCTGACACGTTACCAGACAAGCACTTCATGTGTACATGTTCAGTGGAGTATATGTTTGTAGATGTTGTTTTACGCTTCACTTTGACAATTTGTAGCTTCGAAATTATCACCGTGGGAAGTGTCGGGATGCGAGAAACTGTAACCGTATGTTTGGATCGAAGTGTAGGTTTGAAACGGAAATCCAAACATCCCTTAAATTACATTGTCATCTACCGAATACAAAATTCTTAATATCTTTCCGTATAACTGAATAAGTTGATGTTGACAGTTGTAATGGCAGGCCTGTGGAGTGTTTGTTTGAATAAAGATAGTGAACCATTTTTCGCTAAAGAATGAAATATACTATAACAGTGATTGTTATTTAGAGCTTCAATTGTCTATTTATTGATTTATTTAAGATTCATTGATATTGTTGAATGTTTGATAATAATTTTCCTGGTTTTTTGTGAGTCAGGTCAAGGAGCAGGTGAAGCGAAAAGGGCTTTGTATCATTGCAATTACTGTAATAAAGATATTACAGGAAAAATCCGTATCAAGTGTGCCATGTGCCCAGATTTTGACTTATGTATTGAGTGCTTTTCTGTTGGGGCTGAGGTGACACCCCACAAAAGCAATCATTCTTACAGGGTCATGGTGAGTAACCATTACTTTCAAATGTTTTCCTTTGATGTCTTATTAAACATAACCTTTTGATCAATCGAAAGGTTATACAGTAATTATCCTGCTAGACTGCAGGTTGATCACTCTGAGTTTAATTACAGGATTAATCATTTAAGTTAGATTCGAAATTATCTGATACTGTTTTTTTTATCACGTTGAGTATAAATCATATTTAAAATAATTTATGTATCTGCCAAACCGCTGTTATGAAAATTGCATTACCACTAGTTTCGCCGACATTGTTGTTATCATTGCTTTGTTTCTCTATCTATAAGAGAAACTATTTGGAAAGATTTAGAGGTTAACGAGTTGGATCCAAATACGGTTTATGATAGAACATTATGGCGTAATTTGATCCATGTAGCTAACTCCACTTAGTGGGATAAGGCATGGTTGTTGTTGTTGTATTGCTTTGTTTCTCTATATCAGTTTTTTAATACGGTTCCTTGTTGTCAGGATAATTTGTCTTTCCCTCTCATTTGCCCAGACTGGAATGCAGATGATGAAATTTTGCTTCTAGAGGTACTTGGTTTAAATTAATTGCCTAGGAGTAGCGGTGAATTTAATATGATAATATGATAAAGCATTATATTTGGTGTTGAAGAAGAAATCTACTATTAATATCTGACTTTTCTAGCAACAAATTTTTGGTTTTAGGGAATAGAAATGTATGGCATGGGAAACTGGGCAGAAGTTGCTGAGCATGTTGGAACAAAGAACAAAGAAGCATGCATAGAACACTATAGGAATGTGTACTTAAACTCCCCGTTCTTCCCTCTTCCGGTATGTCAGGCTTTGAATGAAGCTGCAATCAGTGCTTATCATATTCGTTTATATAAAGGTATTTTAAATGCTGACCATTCTTATTTACTAGGACATGTCTCATGTTGTTGGGAAAAACAGAAAAGAACTTCTTGCCATGGCGAAAGGGCAGGGTGAGGACAAGAAAGGTTTGTCTCAATACACAACATCACATTCATTAGTTTCTGTAGTTTTTGGGGAAAAAATGATTTCACTTACATAGCATACTGTTATAAATCAGGAATGCCTCATTTATCACTTCTTTTGGATAGATTTATATTGATATACTGTATCTCCAAACAATAAATAATAATGCCTCATTTATGTTGCTGATAACTGCTAAAATATGTTTCGGAGAATAAATTTATTATAATCTATGATTCTATGGCTTCTGATTTTTCGCTGATTGGTTGGTTTTTGTTTTGGTCACATTTTTATTTTATAAATATTGGTCACATTCTTCTTTATAAATACTGGTTACTTGTGATTGTAACAGGACTTCCCATGGGAGATCTTAGCATAAAGGAAGAATCACCCTTTTCTCCATCTAGAGTCAAGTAAGGCTGTCTTTTTTTGTACGCATTAACTCTTTCCATGTTCAATACCATGTTGATTGACTTCTAAATGTTGATTCAGAATGGAAGATTCCAACAAATCTGGTTCCACTGGCCGTTTGACTTCTAATATGAATTCAGGTAAGCTAAATAAGTCAATAGCTAAGATGTATACAACAATTTCCCAATTATAATTTCCTTTCAATCTCTATATTGTTTATATATTGTAGGGTCAGATTCTGGGCCCTCAGTCAACACACATGCTGCAGCTAGTGCTAACCAAAAGGCATCCAATAAAGGGCGGGGGAAAGGTGGTCCTGGAATTGTTAAAATGGAAGGTGTGCATTTTATATTTGGTCATAAATCCCAATTGACATTACACAATGCTGATTCTTTGAGGAAATTCATCTCATGACTTTACATTCTGTATTTTATCCTAGTTCTTTTGTCATTGACAGATTCTCCAATGGACAGAGATTTTGGAGGAAATAAGCCAAATTCCTCAAGAAATGAAGGCCCTTCTTTGGTTGAAATCAGTGGTTATAACGCGAAAAGACAGGAATTCGATCCTGAATATGATAATGATGCTGAGCAATTACTCGCCGAAATGGAGTTTAAGGACACTGACACTGAGGAGGAGCGAGAGATCAAACTTCGTGTGCTGCGCATTTATTCAAAAAGGTAAACAGCCATTTTAGTTTTATAGGTTTCTTTTCCTGAGTCATCCACACTCAAAATCATAAACAATAATGGTATTTGTTGCATAGTATTGCTCACGTTCCTATCTTTAAATTGAAAAACGTTGCAGGCTTGATGAAAGAAAGCGCAGGAAGGAATTCATACTTGAAAGAAATTTGCTTTATCCAAATCCATTTGAGAAGGATTTAACACCCGAGGAAAAGTCAATATGCCGGAAATATGACATGTTCATGCGCTTTCATACTAAGGAAGAGCACGATGAATTACTCAGAACCGTTATCTCTGAACATAGGACTCTGAAAAGAATTCAAGAGCTTAAGGTTTGAGACATGGATGCCATTAAATTCTTATCGACATTCCTTTTTTTTTCTCTACTTGGAAAATTGAACAGTCATCTCTGACATTTGTTGAACATGATCGCAGGAAGCTCGTGCTGCTGGTTGCCGCAGTTCAGTTGAAGCAGATAGATATCTGGCGCATAAGAGAAGAAAGGAATCTGAAGAAAGTGCTTGTAGAGCGAGAGAAAGTGCTCATGTGGTCCCGAACAATCACGGGGTTCCAAATGCATTAATGTCTCCAGACTCTGCTGGTACCAGACCTGCAGGGTCAAGTTCTGTCAATGAAATGGATGCAACTGGATACTATGGAGCAGATTTACTTTCTGAAGCTGTAAGAATAATTTTCTTCTGCCAAGTTTGCATTCTAAAACTGTACATTGCTTCTTATTTTGTTTTCTGAAACCATCGGCTGTAAATTCTGCCAGGAGAAACGTTTGTGCTGCGATTTAAGGTTGCCTCCAACCGTTTATCTGAAGATGCAAGAGGACCTATCTGTACAAATGATTGCTGGCAACGTCTCTTCAAAATCTGATGCTCATCAAATGTTCAAGAATGTGGATACCATCAAAATTGACAGGGTGTATGATATGCTCATTAAGAAGGGAATTGGTTCATTCTGA
Protein sequence

>MS.gene02928.t1

MGRSRGNFHHNDDDPSQRSRRKKNAASGDNSESGVAGQGAGEAKRALYHCNYCNKDITGKIRIKCAMCPDFDLCIECFSVGAEVTPHKSNHSYRVMDNLSFPLICPDWNADDEILLLEGIEMYGMGNWAEVAEHVGTKNKEACIEHYRNVYLNSPFFPLPDMSHVVGKNRKELLAMAKGQGEDKKGLPMGDLSIKEESPFSPSRVKMEDSNKSGSTGRLTSNMNSGSDSGPSVNTHAAASANQKASNKGRGKGGPGIVKMEDSPMDRDFGGNKPNSSRNEGPSLVEISGYNAKRQEFDPEYDNDAEQLLAEMEFKDTDTEEEREIKLRVLRIYSKRLDERKRRKEFILERNLLYPNPFEKDLTPEEKSICRKYDMFMRFHTKEEHDELLRTVISEHRTLKRIQELKEARAAGCRSSVEADRYLAHKRRKESEESACRARESAHVVPNNHGVPNALMSPDSAGTRPAGSSSVNEMDATGYYGADLLSEAEKRLCCDLRLPPTVYLKMQEDLSVQMIAGNVSSKSDAHQMFKNVDTIKIDRVYDMLIKKGIGSF