Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029316.t1 | XP_013470287.1 | 98.3 | 418 | 7 | 0 | 1 | 418 | 1 | 418 | 9.60E-235 | 822.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029316.t1 | F4JCU3 | 80.7 | 419 | 80 | 1 | 1 | 418 | 1 | 419 | 2.1e-198 | 693.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029316.t1 | A0A072W240 | 98.3 | 418 | 7 | 0 | 1 | 418 | 1 | 418 | 6.9e-235 | 822.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene029316 | MS.gene97105 | PPI |
| MS.gene029316 | MS.gene043206 | PPI |
| MS.gene029316 | MS.gene98348 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029316.t1 | MTR_1g112230 | 98.325 | 418 | 7 | 0 | 1 | 418 | 1 | 418 | 0.0 | 853 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029316.t1 | AT3G54250 | 80.668 | 419 | 80 | 1 | 1 | 418 | 1 | 419 | 0.0 | 697 |
| MS.gene029316.t1 | AT2G38700 | 76.372 | 419 | 91 | 2 | 1 | 418 | 1 | 412 | 0.0 | 654 |
| MS.gene029316.t1 | AT3G54250 | 84.039 | 307 | 49 | 0 | 1 | 307 | 1 | 307 | 0.0 | 530 |
Find 116 sgRNAs with CRISPR-Local
Find 420 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTTCCCATGTACCTTATT+TGG | 0.031696 | 1.4:+86204577 | None:intergenic |
| GCTCTTCTCAACAGTGAAAA+TGG | 0.180412 | 1.4:-86204605 | MS.gene029316:CDS |
| CTTCCCTCCAGTTACATTAT+TGG | 0.191653 | 1.4:-86204803 | MS.gene029316:intron |
| GGAATATTGTCTTTAATTTC+TGG | 0.195761 | 1.4:+86204713 | None:intergenic |
| GAAGATTCCAGAGCTGTTTA+AGG | 0.204279 | 1.4:-86209800 | MS.gene029316:CDS |
| AGTGCTTGTCGTAGCTTATT+TGG | 0.220437 | 1.4:-86207275 | MS.gene029316:CDS |
| GTGTAGGAAATTTCTCTTTC+CGG | 0.230107 | 1.4:-86209825 | MS.gene029316:intron |
| GGGATTTGTGAAGTGGAAAA+TGG | 0.242630 | 1.4:-86207252 | MS.gene029316:CDS |
| TGATGTTGAGGATAATAAAA+AGG | 0.260260 | 1.4:-86209757 | MS.gene029316:CDS |
| GTGCTTGTCGTAGCTTATTT+GGG | 0.264802 | 1.4:-86207274 | MS.gene029316:CDS |
| ATCATTAACAGGTAAGATTA+GGG | 0.303873 | 1.4:+86210596 | None:intergenic |
| TATCATTCATGTAAAATATA+GGG | 0.309352 | 1.4:+86205827 | None:intergenic |
| CGGTTCTAATTGCACGTAAT+AGG | 0.313651 | 1.4:-86204982 | MS.gene029316:CDS |
| GCCAAAGAGGATACTGAAAA+TGG | 0.316786 | 1.4:-86205944 | MS.gene029316:CDS |
| CTGTTGAGGTCATCTGAATT+TGG | 0.317231 | 1.4:+86204914 | None:intergenic |
| TATCATTAACAGGTAAGATT+AGG | 0.322166 | 1.4:+86210595 | None:intergenic |
| GTATCATTCATGTAAAATAT+AGG | 0.322715 | 1.4:+86205826 | None:intergenic |
| CATTGCTGTGATCAAGTATT+GGG | 0.327233 | 1.4:-86210634 | MS.gene029316:CDS |
| AACAGGTCCCCTTCCTGGTC+TGG | 0.327487 | 1.4:+86204649 | None:intergenic |
| TGTAGGAAATTTCTCTTTCC+GGG | 0.344687 | 1.4:-86209824 | MS.gene029316:intron |
| CCAGTTTCATGCAGTTTGTC+TGG | 0.349580 | 1.4:-86205860 | MS.gene029316:CDS |
| GAAAATGGGCTTCCCAAATA+AGG | 0.349886 | 1.4:-86204590 | None:intergenic |
| ATTTCCCATGTACCTTATTT+GGG | 0.363262 | 1.4:+86204578 | None:intergenic |
| CTTCCCCACTGCAGCTGGAT+TGG | 0.391119 | 1.4:-86209673 | MS.gene029316:CDS |
| CAATTTGCTCCAATCCTCCT+TGG | 0.409304 | 1.4:+86209722 | None:intergenic |
| CCAGACAAACTGCATGAAAC+TGG | 0.411135 | 1.4:+86205860 | None:intergenic |
| AACAACTTCCCCACTGCAGC+TGG | 0.415060 | 1.4:-86209678 | MS.gene029316:CDS |
| CGTGCAATTAGAACCGCGTT+TGG | 0.416780 | 1.4:+86204989 | None:intergenic |
| TGGAAATGGCGGGTGATAGT+TGG | 0.416905 | 1.4:-86210689 | None:intergenic |
| AAAGCAACTTCTGAATCAAA+AGG | 0.417167 | 1.4:+86204948 | None:intergenic |
| CTTTCATCAGTAAGCACAAC+AGG | 0.429825 | 1.4:+86204632 | None:intergenic |
| AGCACAACAGGTCCCCTTCC+TGG | 0.433113 | 1.4:+86204644 | None:intergenic |
| CTAGGTTAGCTCTCGGCAAA+AGG | 0.434194 | 1.4:-86206429 | MS.gene029316:intron |
| CAAATTCAGATGACCTCAAC+AGG | 0.435218 | 1.4:-86204913 | MS.gene029316:intron |
| GCAAAAGATGCTGGGATCAA+TGG | 0.438234 | 1.4:-86204767 | MS.gene029316:CDS |
| ACACTGATACTATCATTAAC+AGG | 0.448731 | 1.4:+86210585 | None:intergenic |
| AAGTCAATTGCAAAAGATGC+TGG | 0.449709 | 1.4:-86204776 | MS.gene029316:CDS |
| CTCTTCTCAACAGTGAAAAT+GGG | 0.455253 | 1.4:-86204604 | MS.gene029316:CDS |
| AAGATTCCAGAGCTGTTTAA+GGG | 0.458336 | 1.4:-86209799 | MS.gene029316:CDS |
| GCTGCGGGTTTCGCTTGTCT+TGG | 0.462943 | 1.4:-86209642 | MS.gene029316:intron |
| GGATTTGTGAAGTGGAAAAT+GGG | 0.468572 | 1.4:-86207251 | MS.gene029316:CDS |
| TGACATTCATTAGCTTCCCC+AGG | 0.470709 | 1.4:+86207457 | None:intergenic |
| GGAAATGGCGGGTGATAGTT+GGG | 0.471328 | 1.4:-86210688 | None:intergenic |
| CAAGATCGTATGTGGCTCAA+TGG | 0.475195 | 1.4:-86210501 | MS.gene029316:CDS |
| GGATCTCCCTTAAACAGCTC+TGG | 0.477766 | 1.4:+86209793 | None:intergenic |
| ACATTGCTGTGATCAAGTAT+TGG | 0.482733 | 1.4:-86210635 | MS.gene029316:CDS |
| GTAGCTTATACGTTTGATGC+AGG | 0.483477 | 1.4:-86205013 | MS.gene029316:CDS |
| AAGGAAACTAGCAGCACCTC+AGG | 0.484840 | 1.4:-86206410 | MS.gene029316:CDS |
| ACCTTGCAATAGCAGACAGC+TGG | 0.485298 | 1.4:+86207421 | None:intergenic |
| CCTTTCAACAAGATCGTATG+TGG | 0.485330 | 1.4:-86210509 | MS.gene029316:CDS |
| TTGTCTTTAATTTCTGGAGG+TGG | 0.485942 | 1.4:+86204719 | None:intergenic |
| TGATATTTATAGGAGGAGAA+TGG | 0.489664 | 1.4:-86207156 | MS.gene029316:intron |
| TTAAGATCACCAAGGAGGAT+TGG | 0.489853 | 1.4:-86209731 | MS.gene029316:CDS |
| AACTTGCTGATGAAAAGCAT+TGG | 0.492166 | 1.4:-86207113 | MS.gene029316:CDS |
| AAACTGGTTGCTATCGGTAC+AGG | 0.492574 | 1.4:+86205876 | None:intergenic |
| TCTTTAATTTCTGGAGGTGG+TGG | 0.493387 | 1.4:+86204722 | None:intergenic |
| ACTATATACAGGCAAGGATC+AGG | 0.494638 | 1.4:-86207299 | MS.gene029316:intron |
| TGCAAAATCACGGTTTCGAA+TGG | 0.495401 | 1.4:+86205915 | None:intergenic |
| TGCTGGGATCAATGGAATAG+AGG | 0.509843 | 1.4:-86204759 | MS.gene029316:CDS |
| TGGATTGGCTTCATCAGCTG+CGG | 0.515526 | 1.4:-86209658 | MS.gene029316:CDS |
| CCGTTCAGAAGAAGCTCCAC+AGG | 0.520575 | 1.4:-86205656 | MS.gene029316:intron |
| TACTTTATATGCACCAGACC+AGG | 0.522597 | 1.4:-86204662 | MS.gene029316:CDS |
| ACTTGCTGATGAAAAGCATT+GGG | 0.525139 | 1.4:-86207112 | MS.gene029316:CDS |
| TTGAGGTCATCTGAATTTGG+AGG | 0.527987 | 1.4:+86204917 | None:intergenic |
| TGCTTGTCGTAGCTTATTTG+GGG | 0.531557 | 1.4:-86207273 | MS.gene029316:CDS |
| TGCAGTGGGGAAGTTGTTGT+AGG | 0.531785 | 1.4:+86209683 | None:intergenic |
| ACAGCTCTGGAATCTTCCCC+CGG | 0.536812 | 1.4:+86209806 | None:intergenic |
| GGATTGGCTTCATCAGCTGC+GGG | 0.537741 | 1.4:-86209657 | MS.gene029316:CDS |
| TATTCCATCACAAAAGTACA+AGG | 0.548644 | 1.4:-86204696 | MS.gene029316:CDS |
| AAGCAACTTCTGAATCAAAA+GGG | 0.555123 | 1.4:+86204949 | None:intergenic |
| TTTATTTCTAGGTTAGCTCT+CGG | 0.556502 | 1.4:-86206436 | MS.gene029316:intron |
| ATCATTCATGTAAAATATAG+GGG | 0.557388 | 1.4:+86205828 | None:intergenic |
| TGCATGAAACTGGTTGCTAT+CGG | 0.559504 | 1.4:+86205870 | None:intergenic |
| TAGCTTATACGTTTGATGCA+GGG | 0.567321 | 1.4:-86205012 | MS.gene029316:CDS |
| TGAAGCCAATCCAGCTGCAG+TGG | 0.570482 | 1.4:+86209668 | None:intergenic |
| AAAGGAAGGACTAACAGAAA+CGG | 0.573695 | 1.4:+86210527 | None:intergenic |
| TATATGCACCAGACCAGGAA+GGG | 0.575319 | 1.4:-86204657 | MS.gene029316:CDS |
| GACATTCATTAGCTTCCCCA+GGG | 0.579343 | 1.4:+86207458 | None:intergenic |
| AATAGGAAATAGTGCCAAAG+AGG | 0.581666 | 1.4:-86205957 | MS.gene029316:intron |
| ATATTGTCTTTAATTTCTGG+AGG | 0.581787 | 1.4:+86204716 | None:intergenic |
| GAAGCCAATCCAGCTGCAGT+GGG | 0.584983 | 1.4:+86209669 | None:intergenic |
| TTCCATCACAAAAGTACAAG+GGG | 0.586717 | 1.4:-86204694 | MS.gene029316:CDS |
| TAATCAGCATTGTTGACAAG+TGG | 0.588743 | 1.4:-86205681 | MS.gene029316:CDS |
| AGTCAATTGCAAAAGATGCT+GGG | 0.589588 | 1.4:-86204775 | MS.gene029316:CDS |
| CAACATCACACGCGCGAGCA+CGG | 0.590089 | 1.4:+86209772 | None:intergenic |
| TGCTCGCGCGTGTGATGTTG+AGG | 0.590241 | 1.4:-86209769 | MS.gene029316:CDS |
| CCTGTGGAGCTTCTTCTGAA+CGG | 0.591583 | 1.4:+86205656 | None:intergenic |
| ATACTTGATCACAGCAATGT+TGG | 0.591879 | 1.4:+86210638 | None:intergenic |
| ATTGATTTATTGGAAATGGC+GGG | 0.593123 | 1.4:-86210699 | None:intergenic |
| ATACGATCTTGTTGAAAGGA+AGG | 0.593700 | 1.4:+86210513 | None:intergenic |
| ACTTGTTATTGTTATTGCTG+TGG | 0.594012 | 1.4:-86207085 | MS.gene029316:intron |
| GGGTGATAGTTGGGTACTGA+TGG | 0.595158 | 1.4:-86210679 | MS.gene029316:CDS |
| GTTGTGGTGCAAAGATGAGC+GGG | 0.596599 | 1.4:+86210552 | None:intergenic |
| CCACATACGATCTTGTTGAA+AGG | 0.601733 | 1.4:+86210509 | None:intergenic |
| AACAGTATCACGCATTCCTG+AGG | 0.602816 | 1.4:+86206394 | None:intergenic |
| TCGTATGTGGCTCAATGGCA+AGG | 0.603313 | 1.4:-86210496 | MS.gene029316:intron |
| TGAGGTCATCTGAATTTGGA+GGG | 0.603420 | 1.4:+86204918 | None:intergenic |
| GCCAGCTGTCTGCTATTGCA+AGG | 0.603691 | 1.4:-86207422 | MS.gene029316:intron |
| GCTTGTCGTAGCTTATTTGG+GGG | 0.616141 | 1.4:-86207272 | MS.gene029316:CDS |
| GTAGGAAATTTCTCTTTCCG+GGG | 0.619131 | 1.4:-86209823 | MS.gene029316:intron |
| ATATGCACCAGACCAGGAAG+GGG | 0.629282 | 1.4:-86204656 | MS.gene029316:CDS |
| TTGATCACAGCAATGTTGGT+TGG | 0.639254 | 1.4:+86210642 | None:intergenic |
| ACATGAATGATACATCCCAT+AGG | 0.641400 | 1.4:-86205816 | MS.gene029316:intron |
| ATTCCATCACAAAAGTACAA+GGG | 0.644199 | 1.4:-86204695 | MS.gene029316:CDS |
| TCATTCATGTAAAATATAGG+GGG | 0.658384 | 1.4:+86205829 | None:intergenic |
| AGTTGTGGTGCAAAGATGAG+CGG | 0.662479 | 1.4:+86210551 | None:intergenic |
| GAATGGAAGTGATAGTCTTG+CGG | 0.663425 | 1.4:-86207139 | MS.gene029316:CDS |
| ACTAACAGAAACGGTAGTTG+TGG | 0.671981 | 1.4:+86210536 | None:intergenic |
| ATTGCTGTGATCAAGTATTG+GGG | 0.675109 | 1.4:-86210633 | MS.gene029316:CDS |
| GTTTGATGCAGGGCCAAACG+CGG | 0.678166 | 1.4:-86205002 | MS.gene029316:CDS |
| TTATATGCACCAGACCAGGA+AGG | 0.679375 | 1.4:-86204658 | MS.gene029316:CDS |
| TAGGAAATTTCTCTTTCCGG+GGG | 0.687639 | 1.4:-86209822 | MS.gene029316:CDS |
| GGGTATTAAGATCACCAAGG+AGG | 0.716838 | 1.4:-86209736 | MS.gene029316:CDS |
| AAAGGGTATTAAGATCACCA+AGG | 0.729322 | 1.4:-86209739 | MS.gene029316:CDS |
| TCCATCACAAAAGTACAAGG+GGG | 0.737564 | 1.4:-86204693 | MS.gene029316:CDS |
| AAGCCAATCCAGCTGCAGTG+GGG | 0.738884 | 1.4:+86209670 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATTATCTAATAAAATTG+TGG | + | chr1.4:86207006-86207025 | None:intergenic | 10.0% |
| !! | CAAATAAATAAAAAATTATG+TGG | + | chr1.4:86208705-86208724 | None:intergenic | 10.0% |
| !! | CATATATAGTATATATTATA+CGG | - | chr1.4:86210165-86210184 | MS.gene029316:intron | 10.0% |
| !!! | TTAAATTTTCAATTCTTAAT+GGG | - | chr1.4:86204850-86204869 | MS.gene029316:intron | 10.0% |
| !!! | TTTAAATTTTCAATTCTTAA+TGG | - | chr1.4:86204849-86204868 | MS.gene029316:intron | 10.0% |
| !!! | TTTTACTTTCAATTTTTAAT+TGG | - | chr1.4:86205406-86205425 | MS.gene029316:intron | 10.0% |
| !! | AGATTATTGAATAAAGAATA+AGG | + | chr1.4:86207582-86207601 | None:intergenic | 15.0% |
| !! | ATAACTATAATAGATTGAAT+CGG | - | chr1.4:86207056-86207075 | MS.gene029316:intron | 15.0% |
| !! | CATTAATTAATAAAAATCTG+AGG | - | chr1.4:86207183-86207202 | MS.gene029316:intron | 15.0% |
| !! | TAATTCATTAGTTACTTATT+TGG | - | chr1.4:86209840-86209859 | MS.gene029316:intron | 15.0% |
| !! | TATATAGTAACAACAATATT+CGG | + | chr1.4:86207965-86207984 | None:intergenic | 15.0% |
| !! | TATCATTCATGTAAAATATA+GGG | + | chr1.4:86209452-86209471 | None:intergenic | 15.0% |
| !! | TTATATAAATAATTATGCCA+TGG | - | chr1.4:86209245-86209264 | MS.gene029316:intron | 15.0% |
| !! | TTATTTGGAAAACAAATTAA+AGG | - | chr1.4:86209855-86209874 | MS.gene029316:intron | 15.0% |
| !! | TTCTTTATTCAATAATCTTT+AGG | - | chr1.4:86207584-86207603 | MS.gene029316:intron | 15.0% |
| !!! | ATTTCTTTAGAAATATACAT+TGG | + | chr1.4:86209022-86209041 | None:intergenic | 15.0% |
| !!! | CATTTTTTATATGTATTTGA+TGG | - | chr1.4:86205190-86205209 | MS.gene029316:intron | 15.0% |
| !!! | CTCAGATTTTTATTAATTAA+TGG | + | chr1.4:86207185-86207204 | None:intergenic | 15.0% |
| !!! | TATTTTATTTAAATCTCTGT+GGG | - | chr1.4:86208057-86208076 | MS.gene029316:intron | 15.0% |
| !!! | TGTATTCTTTTGATATTTAT+AGG | - | chr1.4:86208110-86208129 | MS.gene029316:intron | 15.0% |
| !!! | TTACTATTACTTTTATATGA+GGG | - | chr1.4:86207735-86207754 | MS.gene029316:intron | 15.0% |
| !!! | TTTCTTTAGAAATATACATT+GGG | + | chr1.4:86209021-86209040 | None:intergenic | 15.0% |
| !! | AAAGTAATATTCATCTAACA+TGG | + | chr1.4:86208979-86208998 | None:intergenic | 20.0% |
| !! | AAAGTTTAAAGAGAAAAAAG+AGG | + | chr1.4:86204815-86204834 | None:intergenic | 20.0% |
| !! | AAGTTTAAAGAGAAAAAAGA+GGG | + | chr1.4:86204814-86204833 | None:intergenic | 20.0% |
| !! | AATGATAAGAAGAAAATTAG+AGG | - | chr1.4:86206090-86206109 | MS.gene029316:intron | 20.0% |
| !! | AGAATAACCAAAATATTCAT+GGG | + | chr1.4:86206188-86206207 | None:intergenic | 20.0% |
| !! | AGATTTAGGAAAAAAACAAT+CGG | + | chr1.4:86209782-86209801 | None:intergenic | 20.0% |
| !! | ATAAAAAGAAAGAATATCGA+CGG | + | chr1.4:86206782-86206801 | None:intergenic | 20.0% |
| !! | ATATTGCCAAATTAGTATTA+TGG | + | chr1.4:86208616-86208635 | None:intergenic | 20.0% |
| !! | ATCATACCATAATACTAATT+TGG | - | chr1.4:86208607-86208626 | MS.gene029316:intron | 20.0% |
| !! | ATCATTCATGTAAAATATAG+GGG | + | chr1.4:86209451-86209470 | None:intergenic | 20.0% |
| !! | ATGATAAGAAGAAAATTAGA+GGG | - | chr1.4:86206091-86206110 | MS.gene029316:intron | 20.0% |
| !! | CAAAAGAATACAAATTACAA+TGG | + | chr1.4:86208102-86208121 | None:intergenic | 20.0% |
| !! | CTAGAAATAAATAATGAGAT+GGG | + | chr1.4:86208831-86208850 | None:intergenic | 20.0% |
| !! | CTTATTAATAACTCAATACT+TGG | + | chr1.4:86207424-86207443 | None:intergenic | 20.0% |
| !! | GTATCATTCATGTAAAATAT+AGG | + | chr1.4:86209453-86209472 | None:intergenic | 20.0% |
| !! | GTTGAACTAATAAATGTTAT+TGG | - | chr1.4:86206680-86206699 | MS.gene029316:intron | 20.0% |
| !! | TAATCAAACTTAAATTACCA+TGG | + | chr1.4:86209265-86209284 | None:intergenic | 20.0% |
| !! | TAGAATAACCAAAATATTCA+TGG | + | chr1.4:86206189-86206208 | None:intergenic | 20.0% |
| !! | TATATAAACATCATTCATGT+GGG | + | chr1.4:86210126-86210145 | None:intergenic | 20.0% |
| !! | TTCAAACTTTATGTTCTTTA+AGG | - | chr1.4:86207615-86207634 | MS.gene029316:intron | 20.0% |
| !! | TTGGTATTAAAAGAATGAAA+AGG | + | chr1.4:86209085-86209104 | None:intergenic | 20.0% |
| !! | TTTGACTCTATTTAATTGAA+TGG | - | chr1.4:86208227-86208246 | MS.gene029316:intron | 20.0% |
| !!! | ATACTTGATAATAATATGAG+AGG | + | chr1.4:86210036-86210055 | None:intergenic | 20.0% |
| !!! | ATATTGTTGTTACTATATAC+AGG | - | chr1.4:86207966-86207985 | MS.gene029316:intron | 20.0% |
| !!! | ATGTTTATTGTCTTATGTTT+TGG | - | chr1.4:86207544-86207563 | MS.gene029316:intron | 20.0% |
| !!! | ATTCTTTTGATATTTATAGG+AGG | - | chr1.4:86208113-86208132 | MS.gene029316:intron | 20.0% |
| !!! | GTATTTTATTTAAATCTCTG+TGG | - | chr1.4:86208056-86208075 | MS.gene029316:intron | 20.0% |
| !!! | GTTACTATTACTTTTATATG+AGG | - | chr1.4:86207734-86207753 | MS.gene029316:intron | 20.0% |
| !!! | TAAAAGAATGAAAAGGTTTT+AGG | + | chr1.4:86209078-86209097 | None:intergenic | 20.0% |
| !!! | TACTTTCAATTTTTAATTGG+TGG | - | chr1.4:86205409-86205428 | MS.gene029316:intron | 20.0% |
| ! | AAACTAAAAGAAACTTCCTA+TGG | - | chr1.4:86209743-86209762 | MS.gene029316:CDS | 25.0% |
| ! | AAGTATTAAATGGTATGTTG+TGG | - | chr1.4:86208295-86208314 | MS.gene029316:intron | 25.0% |
| ! | ACAAGATAAAAAATACTGCT+TGG | + | chr1.4:86208729-86208748 | None:intergenic | 25.0% |
| ! | ACTAAAACAACATGGAAATT+AGG | + | chr1.4:86207695-86207714 | None:intergenic | 25.0% |
| ! | AGTAAGCATGAATTTAAACA+CGG | - | chr1.4:86209175-86209194 | MS.gene029316:intron | 25.0% |
| ! | ATACTAATTTGGCAATATTG+TGG | - | chr1.4:86208618-86208637 | MS.gene029316:intron | 25.0% |
| ! | ATACTCATAACAATTACATG+TGG | + | chr1.4:86205738-86205757 | None:intergenic | 25.0% |
| ! | ATAGAAACCTATGAATTTGT+AGG | + | chr1.4:86210212-86210231 | None:intergenic | 25.0% |
| ! | ATCATTAACAGGTAAGATTA+GGG | + | chr1.4:86204683-86204702 | None:intergenic | 25.0% |
| ! | ATGTAGTAATTTGAGAAAAC+TGG | + | chr1.4:86205083-86205102 | None:intergenic | 25.0% |
| ! | ATGTTACAAGAAATAGTTTG+AGG | - | chr1.4:86206006-86206025 | MS.gene029316:intron | 25.0% |
| ! | CAAGATAAAAAATACTGCTT+GGG | + | chr1.4:86208728-86208747 | None:intergenic | 25.0% |
| ! | CAATAACCATTACAATTACA+TGG | + | chr1.4:86205777-86205796 | None:intergenic | 25.0% |
| ! | CATCTTACTATTGTTAACAT+TGG | - | chr1.4:86209123-86209142 | MS.gene029316:intron | 25.0% |
| ! | CATGTAATTGTAATGGTTAT+TGG | - | chr1.4:86205775-86205794 | MS.gene029316:intron | 25.0% |
| ! | CCTAGAAATAAATAATGAGA+TGG | + | chr1.4:86208832-86208851 | None:intergenic | 25.0% |
| ! | GAACTTAGTATGAAAGATTT+AGG | + | chr1.4:86209796-86209815 | None:intergenic | 25.0% |
| ! | GAATAACCAAAATATTCATG+GGG | + | chr1.4:86206187-86206206 | None:intergenic | 25.0% |
| ! | GATGTTGAGGATAATAAAAA+GGG | - | chr1.4:86205520-86205539 | MS.gene029316:intron | 25.0% |
| ! | GTATATAAACATCATTCATG+TGG | + | chr1.4:86210127-86210146 | None:intergenic | 25.0% |
| ! | TAATCAATGACAATCAGATT+TGG | + | chr1.4:86205927-86205946 | None:intergenic | 25.0% |
| ! | TACTATTTGAGAGAGAAAAA+TGG | + | chr1.4:86209159-86209178 | None:intergenic | 25.0% |
| ! | TATCATTAACAGGTAAGATT+AGG | + | chr1.4:86204684-86204703 | None:intergenic | 25.0% |
| ! | TCATTCATGTAAAATATAGG+GGG | + | chr1.4:86209450-86209469 | None:intergenic | 25.0% |
| ! | TGAATTACTTCTGATGTAAA+AGG | + | chr1.4:86209827-86209846 | None:intergenic | 25.0% |
| ! | TGATGTTGAGGATAATAAAA+AGG | - | chr1.4:86205519-86205538 | MS.gene029316:intron | 25.0% |
| ! | TGTGATAATAAACAATCAAG+TGG | + | chr1.4:86205172-86205191 | None:intergenic | 25.0% |
| ! | TTATTAGTTCAACTATGTTG+TGG | + | chr1.4:86206673-86206692 | None:intergenic | 25.0% |
| ! | TTTATATGAGGGTTTATACT+AGG | - | chr1.4:86207746-86207765 | MS.gene029316:intron | 25.0% |
| ! | TTTATGACTTTAAACTTGCA+AGG | - | chr1.4:86207888-86207907 | MS.gene029316:intron | 25.0% |
| ! | TTTGGAAAACAAATTAAAGG+AGG | - | chr1.4:86209858-86209877 | MS.gene029316:intron | 25.0% |
| !! | AAACTTTATGTTCTTTAAGG+CGG | - | chr1.4:86207618-86207637 | MS.gene029316:intron | 25.0% |
| !! | AATTTTCCCCATGAATATTT+TGG | - | chr1.4:86206178-86206197 | MS.gene029316:intron | 25.0% |
| !! | ATATTGTCTTTAATTTCTGG+AGG | + | chr1.4:86210563-86210582 | None:intergenic | 25.0% |
| !! | CCATCTCATTATTTATTTCT+AGG | - | chr1.4:86208829-86208848 | MS.gene029316:intron | 25.0% |
| !! | GGAATATTGTCTTTAATTTC+TGG | + | chr1.4:86210566-86210585 | None:intergenic | 25.0% |
| !! | GTTAAATTTTGTCAATTGTC+TGG | - | chr1.4:86209698-86209717 | MS.gene029316:CDS | 25.0% |
| !! | GTTTAAGATCTAAATCAAAC+AGG | - | chr1.4:86205960-86205979 | MS.gene029316:intron | 25.0% |
| !!! | ATTCTAGAGCAAATATTGAA+AGG | - | chr1.4:86206203-86206222 | MS.gene029316:intron | 25.0% |
| !!! | CACTTTTTATGTGTATTTGT+TGG | - | chr1.4:86204891-86204910 | MS.gene029316:intron | 25.0% |
| !!! | GTTTTAGAATATTGAGTGAT+TGG | + | chr1.4:86209727-86209746 | None:intergenic | 25.0% |
| AAAGCAACTTCTGAATCAAA+AGG | + | chr1.4:86210331-86210350 | None:intergenic | 30.0% | |
| AAGAAAGTAATTCAAACCTG+TGG | + | chr1.4:86209639-86209658 | None:intergenic | 30.0% | |
| AAGAAATAGTTTGAGGATCT+TGG | - | chr1.4:86206013-86206032 | MS.gene029316:intron | 30.0% | |
| AAGAAGAAAATTAGAGGGAA+GGG | - | chr1.4:86206096-86206115 | MS.gene029316:intron | 30.0% | |
| AAGCAACTTCTGAATCAAAA+GGG | + | chr1.4:86210330-86210349 | None:intergenic | 30.0% | |
| AATTGACAAAATTTAACCCC+AGG | + | chr1.4:86209695-86209714 | None:intergenic | 30.0% | |
| ACACTGATACTATCATTAAC+AGG | + | chr1.4:86204694-86204713 | None:intergenic | 30.0% | |
| ACAGGTTTGAATTACTTTCT+TGG | - | chr1.4:86209638-86209657 | MS.gene029316:intron | 30.0% | |
| ACTAACACCTACAAATTCAT+AGG | - | chr1.4:86210202-86210221 | MS.gene029316:intron | 30.0% | |
| ACTATAATAGATTGAATCGG+TGG | - | chr1.4:86207059-86207078 | MS.gene029316:intron | 30.0% | |
| AGATTTCACAATTTGAGAAC+TGG | + | chr1.4:86205823-86205842 | None:intergenic | 30.0% | |
| ATAGTAAGATGCTTGAAAGT+AGG | + | chr1.4:86209114-86209133 | None:intergenic | 30.0% | |
| ATCTAAACCGTGTATTAGAT+TGG | - | chr1.4:86207312-86207331 | MS.gene029316:intron | 30.0% | |
| ATTCAACACATCAGATTCTA+AGG | + | chr1.4:86206976-86206995 | None:intergenic | 30.0% | |
| CAACTATTCTATTTCACTTC+AGG | - | chr1.4:86209571-86209590 | MS.gene029316:intron | 30.0% | |
| CATAAGTTTGAGCATAATGT+GGG | - | chr1.4:86205879-86205898 | MS.gene029316:CDS | 30.0% | |
| CGGATATTATAAAACACCAT+AGG | + | chr1.4:86209762-86209781 | None:intergenic | 30.0% | |
| CTACTGTAACTAAAACAACA+TGG | + | chr1.4:86207703-86207722 | None:intergenic | 30.0% | |
| CTCAATTATGGCTACAAATA+CGG | + | chr1.4:86207398-86207417 | None:intergenic | 30.0% | |
| CTTGTGTAAAAAACATGGTA+AGG | - | chr1.4:86206397-86206416 | MS.gene029316:CDS | 30.0% | |
| GATAATAAACAATCAAGTGG+TGG | + | chr1.4:86205169-86205188 | None:intergenic | 30.0% | |
| GTATTTGTAGCCATAATTGA+GGG | - | chr1.4:86207397-86207416 | MS.gene029316:intron | 30.0% | |
| GTGAAAAAGATGCAAAATCA+CGG | + | chr1.4:86209374-86209393 | None:intergenic | 30.0% | |
| TAAGAAGAAAATTAGAGGGA+AGG | - | chr1.4:86206095-86206114 | MS.gene029316:intron | 30.0% | |
| TAATTGTAATGGTTATTGGC+CGG | - | chr1.4:86205779-86205798 | MS.gene029316:intron | 30.0% | |
| TAGTAAGATGCTTGAAAGTA+GGG | + | chr1.4:86209113-86209132 | None:intergenic | 30.0% | |
| TATGTGAAGCTCATATATTC+TGG | - | chr1.4:86208325-86208344 | MS.gene029316:intron | 30.0% | |
| TGATATTTATAGGAGGAGAA+TGG | - | chr1.4:86208120-86208139 | MS.gene029316:intron | 30.0% | |
| TGGATTCCATGTAATTGTAA+TGG | - | chr1.4:86205768-86205787 | MS.gene029316:intron | 30.0% | |
| TTAAACCTTTACTCCATAAC+TGG | - | chr1.4:86210068-86210087 | MS.gene029316:intron | 30.0% | |
| TTACATGGAATCCAATTTGT+TGG | + | chr1.4:86205762-86205781 | None:intergenic | 30.0% | |
| TTATCTCATTATCCAAACTC+AGG | - | chr1.4:86206141-86206160 | MS.gene029316:intron | 30.0% | |
| TTATGAGTATGCCAACAAAT+TGG | - | chr1.4:86205748-86205767 | MS.gene029316:intron | 30.0% | |
| TTCATGAATAAACTTTGACC+AGG | - | chr1.4:86206229-86206248 | MS.gene029316:intron | 30.0% | |
| TTTCTCATTTGAACCACAAT+AGG | - | chr1.4:86209302-86209321 | MS.gene029316:intron | 30.0% | |
| TTTGCTTCCTAATGTGTTAA+TGG | - | chr1.4:86208655-86208674 | MS.gene029316:intron | 30.0% | |
| ! | ACTTGTCTTTTTATGAGTGT+TGG | + | chr1.4:86206629-86206648 | None:intergenic | 30.0% |
| ! | ATTCCATCACAAAAGTACAA+GGG | - | chr1.4:86210581-86210600 | MS.gene029316:CDS | 30.0% |
| ! | ATTTGTTTCGGGTACATAAT+CGG | - | chr1.4:86207084-86207103 | MS.gene029316:intron | 30.0% |
| ! | GGGTATTATATGCATTTTCA+GGG | + | chr1.4:86210106-86210125 | None:intergenic | 30.0% |
| ! | GTTTATATACACAGCTTGTT+TGG | - | chr1.4:86210137-86210156 | MS.gene029316:intron | 30.0% |
| ! | TATTCCATCACAAAAGTACA+AGG | - | chr1.4:86210580-86210599 | MS.gene029316:CDS | 30.0% |
| ! | TGAGTTTTTCTCGAATTCAT+TGG | - | chr1.4:86205004-86205023 | MS.gene029316:CDS | 30.0% |
| ! | TGGGTATTATATGCATTTTC+AGG | + | chr1.4:86210107-86210126 | None:intergenic | 30.0% |
| ! | TGTGTATTTGTTGGATTCAT+TGG | - | chr1.4:86204900-86204919 | MS.gene029316:intron | 30.0% |
| !! | ACTTGTTATTGTTATTGCTG+TGG | - | chr1.4:86208191-86208210 | MS.gene029316:intron | 30.0% |
| !! | ATATTGGCCTTGGATAATAA+AGG | - | chr1.4:86206300-86206319 | MS.gene029316:intron | 30.0% |
| !! | CTTATGTTTTGGATTCATAG+AGG | - | chr1.4:86207555-86207574 | MS.gene029316:intron | 30.0% |
| !! | TATTGGCCTTGGATAATAAA+GGG | - | chr1.4:86206301-86206320 | MS.gene029316:intron | 30.0% |
| !! | TTGCCTTGTTATTCTCTAAT+AGG | - | chr1.4:86208398-86208417 | MS.gene029316:intron | 30.0% |
| !! | TTTATTTCTAGGTTAGCTCT+CGG | - | chr1.4:86208840-86208859 | MS.gene029316:intron | 30.0% |
| !!! | AACAGGTGCTTTTTAAGTTT+TGG | - | chr1.4:86210380-86210399 | MS.gene029316:intron | 30.0% |
| !!! | GAAAAGGTTTTAGGAAAAGA+GGG | + | chr1.4:86209069-86209088 | None:intergenic | 30.0% |
| !!! | TGAAAAGGTTTTAGGAAAAG+AGG | + | chr1.4:86209070-86209089 | None:intergenic | 30.0% |
| !!! | TTCTTGTGGTTTTGTCTTTA+TGG | - | chr1.4:86207267-86207286 | MS.gene029316:CDS | 30.0% |
| !!! | TTGTTTTAGTTACAGTAGCA+TGG | - | chr1.4:86207705-86207724 | MS.gene029316:intron | 30.0% |
| AAAAGAAAGAATATCGACGG+CGG | + | chr1.4:86206779-86206798 | None:intergenic | 35.0% | |
| AAACCGTGTATTAGATTGGA+TGG | - | chr1.4:86207316-86207335 | MS.gene029316:intron | 35.0% | |
| AAACTCCAGTTATGGAGTAA+AGG | + | chr1.4:86210076-86210095 | None:intergenic | 35.0% | |
| AAAGGAAGGACTAACAGAAA+CGG | + | chr1.4:86204752-86204771 | None:intergenic | 35.0% | |
| AAGAGCTTGAGAGAAAGAAA+TGG | + | chr1.4:86208362-86208381 | None:intergenic | 35.0% | |
| AAGATTCCAGAGCTGTTTAA+GGG | - | chr1.4:86205477-86205496 | MS.gene029316:intron | 35.0% | |
| AAGTCAATTGCAAAAGATGC+TGG | - | chr1.4:86210500-86210519 | MS.gene029316:CDS | 35.0% | |
| AATACCATACAACGCAATTG+AGG | + | chr1.4:86206527-86206546 | None:intergenic | 35.0% | |
| AATACTTGGTCCCTCAATTA+TGG | + | chr1.4:86207410-86207429 | None:intergenic | 35.0% | |
| AATAGGAAATAGTGCCAAAG+AGG | - | chr1.4:86209319-86209338 | MS.gene029316:intron | 35.0% | |
| AATTATCAGAGCCTACCTAT+GGG | + | chr1.4:86209478-86209497 | None:intergenic | 35.0% | |
| ACATGAATGATACATCCCAT+AGG | - | chr1.4:86209460-86209479 | MS.gene029316:intron | 35.0% | |
| ACATTGCTGTGATCAAGTAT+TGG | - | chr1.4:86204641-86204660 | MS.gene029316:CDS | 35.0% | |
| AGAGCTTGAGAGAAAGAAAT+GGG | + | chr1.4:86208361-86208380 | None:intergenic | 35.0% | |
| AGGCTCTTGTGTAAAAAACA+TGG | - | chr1.4:86206392-86206411 | MS.gene029316:CDS | 35.0% | |
| AGTCAATTGCAAAAGATGCT+GGG | - | chr1.4:86210501-86210520 | MS.gene029316:CDS | 35.0% | |
| ATACGATCTTGTTGAAAGGA+AGG | + | chr1.4:86204766-86204785 | None:intergenic | 35.0% | |
| ATACTTGATCACAGCAATGT+TGG | + | chr1.4:86204641-86204660 | None:intergenic | 35.0% | |
| ATATATGTCTCGTATGCAGA+AGG | - | chr1.4:86209663-86209682 | MS.gene029316:CDS | 35.0% | |
| ATCATCCGAGTCCAATAAAA+AGG | + | chr1.4:86206498-86206517 | None:intergenic | 35.0% | |
| ATCTTGGAATTGTTCGAAGT+AGG | - | chr1.4:86206029-86206048 | MS.gene029316:intron | 35.0% | |
| ATGAATAAATCTGTCTGTCC+AGG | + | chr1.4:86207518-86207537 | None:intergenic | 35.0% | |
| CACCAAGAAAACAAAATCAC+GGG | - | chr1.4:86206254-86206273 | MS.gene029316:intron | 35.0% | |
| CACTACAATTGAATCCACAA+TGG | + | chr1.4:86206742-86206761 | None:intergenic | 35.0% | |
| CACTTGATTGAAGACATTAC+TGG | + | chr1.4:86209938-86209957 | None:intergenic | 35.0% | |
| CATATCAATGTTCACAGAAC+TGG | + | chr1.4:86209895-86209914 | None:intergenic | 35.0% | |
| CATTGCTGTGATCAAGTATT+GGG | - | chr1.4:86204642-86204661 | MS.gene029316:CDS | 35.0% | |
| CATTTGGCCATTAACACATT+AGG | + | chr1.4:86208665-86208684 | None:intergenic | 35.0% | |
| CCACATTATGCTCAAACTTA+TGG | + | chr1.4:86205881-86205900 | None:intergenic | 35.0% | |
| CCACCAAGAAAACAAAATCA+CGG | - | chr1.4:86206253-86206272 | MS.gene029316:intron | 35.0% | |
| CCATAAGTTTGAGCATAATG+TGG | - | chr1.4:86205878-86205897 | MS.gene029316:CDS | 35.0% | |
| CGTATTTGTAGCCATAATTG+AGG | - | chr1.4:86207396-86207415 | MS.gene029316:intron | 35.0% | |
| CGTTGTATGGTATTTGTAGT+TGG | - | chr1.4:86206533-86206552 | MS.gene029316:intron | 35.0% | |
| CTAATGTGTTAATGGCCAAA+TGG | - | chr1.4:86208663-86208682 | MS.gene029316:intron | 35.0% | |
| CTCTTCTCAACAGTGAAAAT+GGG | - | chr1.4:86210672-86210691 | MS.gene029316:CDS | 35.0% | |
| CTTATCATTCTGTCTTAGTC+TGG | + | chr1.4:86206079-86206098 | None:intergenic | 35.0% | |
| CTTGTCACCAATAATGTAAC+TGG | + | chr1.4:86210483-86210502 | None:intergenic | 35.0% | |
| GACATTACTGGCATTCAATT+CGG | + | chr1.4:86209926-86209945 | None:intergenic | 35.0% | |
| GATAGATTTCCAGTGGATAT+TGG | - | chr1.4:86206284-86206303 | MS.gene029316:intron | 35.0% | |
| GATTATGTACCCGAAACAAA+TGG | + | chr1.4:86207085-86207104 | None:intergenic | 35.0% | |
| GGATTTGTGAAGTGGAAAAT+GGG | - | chr1.4:86208025-86208044 | MS.gene029316:intron | 35.0% | |
| GTCTACTACTTGCTTGTTTA+TGG | - | chr1.4:86205306-86205325 | MS.gene029316:intron | 35.0% | |
| GTGAAAGACTACACAAATAC+CGG | + | chr1.4:86205801-86205820 | None:intergenic | 35.0% | |
| GTGTAGGAAATTTCTCTTTC+CGG | - | chr1.4:86205451-86205470 | MS.gene029316:intron | 35.0% | |
| GTTGTTACTATATACAGGCA+AGG | - | chr1.4:86207971-86207990 | MS.gene029316:intron | 35.0% | |
| TAAAGTTGTTGTCATGTGAC+TGG | - | chr1.4:86206342-86206361 | MS.gene029316:intron | 35.0% | |
| TAATCAGCATTGTTGACAAG+TGG | - | chr1.4:86209595-86209614 | MS.gene029316:intron | 35.0% | |
| TAGCTTATACGTTTGATGCA+GGG | - | chr1.4:86210264-86210283 | MS.gene029316:intron | 35.0% | |
| TATGCAGAAGGTTTATTCCT+GGG | - | chr1.4:86209675-86209694 | MS.gene029316:CDS | 35.0% | |
| TATTGGACTCGGATGATAAT+TGG | - | chr1.4:86206501-86206520 | MS.gene029316:intron | 35.0% | |
| TCAATGACAATCAGATTTGG+TGG | + | chr1.4:86205924-86205943 | None:intergenic | 35.0% | |
| TCACCAATAATGTAACTGGA+GGG | + | chr1.4:86210479-86210498 | None:intergenic | 35.0% | |
| TCATCCGAGTCCAATAAAAA+GGG | + | chr1.4:86206497-86206516 | None:intergenic | 35.0% | |
| TCCATAGTGCTTAGATGAAA+TGG | + | chr1.4:86208765-86208784 | None:intergenic | 35.0% | |
| TCCATTTCATCTAAGCACTA+TGG | - | chr1.4:86208761-86208780 | MS.gene029316:intron | 35.0% | |
| TCGCCTATTAGAGAATAACA+AGG | + | chr1.4:86208404-86208423 | None:intergenic | 35.0% | |
| TGATGTGCCATAATAGGATT+GGG | + | chr1.4:86206055-86206074 | None:intergenic | 35.0% | |
| TGCAACTTCAAATCTAATCC+AGG | + | chr1.4:86205987-86206006 | None:intergenic | 35.0% | |
| TGTAGGAAATTTCTCTTTCC+GGG | - | chr1.4:86205452-86205471 | MS.gene029316:intron | 35.0% | |
| TTGATACACAAATTGCACGA+AGG | + | chr1.4:86208956-86208975 | None:intergenic | 35.0% | |
| TTTGGCACTATTTCCTATTG+TGG | + | chr1.4:86209318-86209337 | None:intergenic | 35.0% | |
| ! | ATTGCTGTGATCAAGTATTG+GGG | - | chr1.4:86204643-86204662 | MS.gene029316:CDS | 35.0% |
| ! | TCCATTTTCAGTATCCTCTT+TGG | + | chr1.4:86209336-86209355 | None:intergenic | 35.0% |
| ! | TTCCATCACAAAAGTACAAG+GGG | - | chr1.4:86210582-86210601 | MS.gene029316:CDS | 35.0% |
| ! | TTGGTGGAATTTCGTTTTGT+CGG | - | chr1.4:86205425-86205444 | MS.gene029316:intron | 35.0% |
| ! | TTGTCTTTAATTTCTGGAGG+TGG | + | chr1.4:86210560-86210579 | None:intergenic | 35.0% |
| ! | TTGTTATTCTCTAATAGGCG+AGG | - | chr1.4:86208403-86208422 | MS.gene029316:intron | 35.0% |
| !! | AAAGGGTATTAAGATCACCA+AGG | - | chr1.4:86205537-86205556 | MS.gene029316:intron | 35.0% |
| !! | AACAAGCACTGACAAATACA+CGG | + | chr1.4:86204982-86205001 | None:intergenic | 35.0% |
| !! | AACTTAAAAAGCACCTGTTG+AGG | + | chr1.4:86210379-86210398 | None:intergenic | 35.0% |
| !! | AACTTGCTGATGAAAAGCAT+TGG | - | chr1.4:86208163-86208182 | MS.gene029316:intron | 35.0% |
| !! | ACTTGCTGATGAAAAGCATT+GGG | - | chr1.4:86208164-86208183 | MS.gene029316:intron | 35.0% |
| !! | ATATGCATTTTCAGGGACAT+AGG | + | chr1.4:86210099-86210118 | None:intergenic | 35.0% |
| !! | ATTGGCCTTGGATAATAAAG+GGG | - | chr1.4:86206302-86206321 | MS.gene029316:intron | 35.0% |
| !!! | CTCTCAAGCTCTTTTTAAGT+TGG | - | chr1.4:86208369-86208388 | MS.gene029316:intron | 35.0% |
| !!! | TTGTGGTTTTGTCTTTATGG+AGG | - | chr1.4:86207270-86207289 | MS.gene029316:CDS | 35.0% |
| !!! | TTTGGCTTTTCACATTCTTG+TGG | - | chr1.4:86207253-86207272 | MS.gene029316:CDS | 35.0% |
| AAGTAGGCCCAATCCTATTA+TGG | - | chr1.4:86206045-86206064 | MS.gene029316:intron | 40.0% | |
| ACAACTTTACCTTTGCACCA+AGG | + | chr1.4:86206331-86206350 | None:intergenic | 40.0% | |
| ACACAAATTGCACGAAGGAA+AGG | + | chr1.4:86208951-86208970 | None:intergenic | 40.0% | |
| ACTAACAGAAACGGTAGTTG+TGG | + | chr1.4:86204743-86204762 | None:intergenic | 40.0% | |
| ACTATATACAGGCAAGGATC+AGG | - | chr1.4:86207977-86207996 | MS.gene029316:intron | 40.0% | |
| ACTTCTGGTGTCTGGAAATT+TGG | - | chr1.4:86207235-86207254 | MS.gene029316:intron | 40.0% | |
| AGTGCTTGTCGTAGCTTATT+TGG | - | chr1.4:86208001-86208020 | MS.gene029316:intron | 40.0% | |
| AGTTACAGTAGCATGGTTCT+TGG | - | chr1.4:86207712-86207731 | MS.gene029316:intron | 40.0% | |
| ATGAAGCACAGACACATACA+CGG | + | chr1.4:86205134-86205153 | None:intergenic | 40.0% | |
| ATGCACTTCATCACATTAGC+TGG | + | chr1.4:86209968-86209987 | None:intergenic | 40.0% | |
| ATGCAGAAGGTTTATTCCTG+GGG | - | chr1.4:86209676-86209695 | MS.gene029316:CDS | 40.0% | |
| CAAACACACAACACTAACAC+TGG | + | chr1.4:86205107-86205126 | None:intergenic | 40.0% | |
| CAAATTCAGATGACCTCAAC+AGG | - | chr1.4:86210363-86210382 | MS.gene029316:intron | 40.0% | |
| CAATTATCAGAGCCTACCTA+TGG | + | chr1.4:86209479-86209498 | None:intergenic | 40.0% | |
| CACAAATTGCACGAAGGAAA+GGG | + | chr1.4:86208950-86208969 | None:intergenic | 40.0% | |
| CAGGAAAAAGTTCTACATGG+CGG | + | chr1.4:86207499-86207518 | None:intergenic | 40.0% | |
| CAGTGTTAGTGTTGTGTGTT+TGG | - | chr1.4:86205105-86205124 | MS.gene029316:intron | 40.0% | |
| CCACATACGATCTTGTTGAA+AGG | + | chr1.4:86204770-86204789 | None:intergenic | 40.0% | |
| CCACCATCCAATCTAATACA+CGG | + | chr1.4:86207322-86207341 | None:intergenic | 40.0% | |
| CCTTTCAACAAGATCGTATG+TGG | - | chr1.4:86204767-86204786 | MS.gene029316:CDS | 40.0% | |
| CTGATGTGCCATAATAGGAT+TGG | + | chr1.4:86206056-86206075 | None:intergenic | 40.0% | |
| CTGTTGAGGTCATCTGAATT+TGG | + | chr1.4:86210365-86210384 | None:intergenic | 40.0% | |
| CTTCCCTCCAGTTACATTAT+TGG | - | chr1.4:86210473-86210492 | MS.gene029316:intron | 40.0% | |
| CTTTCATCAGTAAGCACAAC+AGG | + | chr1.4:86210647-86210666 | None:intergenic | 40.0% | |
| GAAGATTCCAGAGCTGTTTA+AGG | - | chr1.4:86205476-86205495 | MS.gene029316:intron | 40.0% | |
| GAATGATACATCCCATAGGT+AGG | - | chr1.4:86209464-86209483 | MS.gene029316:intron | 40.0% | |
| GACATAGGAAACTCCAGTTA+TGG | + | chr1.4:86210084-86210103 | None:intergenic | 40.0% | |
| GAGAAAGAGAAGATTGGTGA+TGG | + | chr1.4:86206837-86206856 | None:intergenic | 40.0% | |
| GAGAGTGAGAAAGAGAAGAT+TGG | + | chr1.4:86206843-86206862 | None:intergenic | 40.0% | |
| GATCTAAATCAAACAGGTCC+TGG | - | chr1.4:86205966-86205985 | MS.gene029316:intron | 40.0% | |
| GATTCACTGCAGTTAGTGAA+AGG | + | chr1.4:86207370-86207389 | None:intergenic | 40.0% | |
| GCCAAAGAGGATACTGAAAA+TGG | - | chr1.4:86209332-86209351 | MS.gene029316:intron | 40.0% | |
| GCTCTTCTCAACAGTGAAAA+TGG | - | chr1.4:86210671-86210690 | MS.gene029316:CDS | 40.0% | |
| GGGATTTGTGAAGTGGAAAA+TGG | - | chr1.4:86208024-86208043 | MS.gene029316:intron | 40.0% | |
| GTAGCTTATACGTTTGATGC+AGG | - | chr1.4:86210263-86210282 | MS.gene029316:intron | 40.0% | |
| GTAGGAAATTTCTCTTTCCG+GGG | - | chr1.4:86205453-86205472 | MS.gene029316:intron | 40.0% | |
| GTATGCAGAAGGTTTATTCC+TGG | - | chr1.4:86209674-86209693 | MS.gene029316:CDS | 40.0% | |
| GTCACCAATAATGTAACTGG+AGG | + | chr1.4:86210480-86210499 | None:intergenic | 40.0% | |
| GTCCAGGAAAAAGTTCTACA+TGG | + | chr1.4:86207502-86207521 | None:intergenic | 40.0% | |
| GTGCTTGTCGTAGCTTATTT+GGG | - | chr1.4:86208002-86208021 | MS.gene029316:intron | 40.0% | |
| TAAGATGCTTGAAAGTAGGG+AGG | + | chr1.4:86209110-86209129 | None:intergenic | 40.0% | |
| TACTTTATATGCACCAGACC+AGG | - | chr1.4:86210614-86210633 | MS.gene029316:CDS | 40.0% | |
| TAGGAAATTTCTCTTTCCGG+GGG | - | chr1.4:86205454-86205473 | MS.gene029316:intron | 40.0% | |
| TATTTGGGGGATTTGTGAAG+TGG | - | chr1.4:86208017-86208036 | MS.gene029316:intron | 40.0% | |
| TCTGGTGTCCATGTATGTTT+CGG | - | chr1.4:86205258-86205277 | MS.gene029316:intron | 40.0% | |
| TGAATCCACAATGGTGAGAA+CGG | + | chr1.4:86206733-86206752 | None:intergenic | 40.0% | |
| TGAGGTCATCTGAATTTGGA+GGG | + | chr1.4:86210361-86210380 | None:intergenic | 40.0% | |
| TGCAAAATCACGGTTTCGAA+TGG | + | chr1.4:86209364-86209383 | None:intergenic | 40.0% | |
| TGCATGAAACTGGTTGCTAT+CGG | + | chr1.4:86209409-86209428 | None:intergenic | 40.0% | |
| TGCTTGTCGTAGCTTATTTG+GGG | - | chr1.4:86208003-86208022 | MS.gene029316:intron | 40.0% | |
| TTAAGATCACCAAGGAGGAT+TGG | - | chr1.4:86205545-86205564 | MS.gene029316:intron | 40.0% | |
| TTCTATGACTGCAGCTAATC+TGG | + | chr1.4:86206561-86206580 | None:intergenic | 40.0% | |
| TTGAGGTCATCTGAATTTGG+AGG | + | chr1.4:86210362-86210381 | None:intergenic | 40.0% | |
| TTGATCACAGCAATGTTGGT+TGG | + | chr1.4:86204637-86204656 | None:intergenic | 40.0% | |
| ! | ACTTGCAAGGTGTTATGACT+TGG | - | chr1.4:86207901-86207920 | MS.gene029316:intron | 40.0% |
| ! | CGGTTCTAATTGCACGTAAT+AGG | - | chr1.4:86210294-86210313 | MS.gene029316:intron | 40.0% |
| ! | GAATGGAAGTGATAGTCTTG+CGG | - | chr1.4:86208137-86208156 | MS.gene029316:intron | 40.0% |
| ! | GAGAGTCGACTTCAAATCAA+AGG | + | chr1.4:86208453-86208472 | None:intergenic | 40.0% |
| ! | GCTTTTACAGCATAGAGCAA+AGG | - | chr1.4:86208916-86208935 | MS.gene029316:intron | 40.0% |
| ! | TCCATCACAAAAGTACAAGG+GGG | - | chr1.4:86210583-86210602 | MS.gene029316:CDS | 40.0% |
| ! | TCTTTAATTTCTGGAGGTGG+TGG | + | chr1.4:86210557-86210576 | None:intergenic | 40.0% |
| ! | TGAAGTCGATTTCCTGAGTT+TGG | + | chr1.4:86206156-86206175 | None:intergenic | 40.0% |
| ! | TGTTTTGCAGTTTATGCCCT+GGG | - | chr1.4:86207802-86207821 | MS.gene029316:intron | 40.0% |
| ! | TTACACAAGAGCCTGTTTTC+AGG | + | chr1.4:86206386-86206405 | None:intergenic | 40.0% |
| !! | AAAGAGAAGATTGGTGATGG+CGG | + | chr1.4:86206834-86206853 | None:intergenic | 40.0% |
| !! | ATGAAGCACCGAAACATACA+TGG | + | chr1.4:86205269-86205288 | None:intergenic | 40.0% |
| !! | CAAGGTGTTATGACTTGGTT+TGG | - | chr1.4:86207906-86207925 | MS.gene029316:intron | 40.0% |
| !! | TACATGGCGGAGTATTGAAT+TGG | + | chr1.4:86207486-86207505 | None:intergenic | 40.0% |
| !! | TTCGTTTTGTCGGTTAGTGT+AGG | - | chr1.4:86205435-86205454 | MS.gene029316:intron | 40.0% |
| !! | TTGGCCTTGGATAATAAAGG+GGG | - | chr1.4:86206303-86206322 | MS.gene029316:intron | 40.0% |
| !!! | AACTTCTAGTTTTGACGTGC+AGG | - | chr1.4:86210241-86210260 | MS.gene029316:intron | 40.0% |
| !!! | AAGGTTTTAGGAAAAGAGGG+AGG | + | chr1.4:86209066-86209085 | None:intergenic | 40.0% |
| !!! | AGGTTTTAGGAAAAGAGGGA+GGG | + | chr1.4:86209065-86209084 | None:intergenic | 40.0% |
| !!! | CCGTGATTTTGTTTTCTTGG+TGG | + | chr1.4:86206256-86206275 | None:intergenic | 40.0% |
| !!! | TGCCCGTGATTTTGTTTTCT+TGG | + | chr1.4:86206259-86206278 | None:intergenic | 40.0% |
| !!! | TTTTGTTTTCTTGGTGGACC+TGG | + | chr1.4:86206250-86206269 | None:intergenic | 40.0% |
| AAACTGGTTGCTATCGGTAC+AGG | + | chr1.4:86209403-86209422 | None:intergenic | 45.0% | |
| AATCGGTGGCCATTTGTTTC+GGG | - | chr1.4:86207073-86207092 | MS.gene029316:intron | 45.0% | |
| AATCTAGCACAGCTGCCATT+TGG | + | chr1.4:86208681-86208700 | None:intergenic | 45.0% | |
| AATGGTGAGAACGGTGAAGA+AGG | + | chr1.4:86206724-86206743 | None:intergenic | 45.0% | |
| ACTAAAGCTCCTGCATAAGC+AGG | + | chr1.4:86206463-86206482 | None:intergenic | 45.0% | |
| AGTTGTGGTGCAAAGATGAG+CGG | + | chr1.4:86204728-86204747 | None:intergenic | 45.0% | |
| ATGTGTCTGTGCTTCATTGC+TGG | - | chr1.4:86205137-86205156 | MS.gene029316:intron | 45.0% | |
| ATTTCCAGACACCAGAAGTC+TGG | + | chr1.4:86207234-86207253 | None:intergenic | 45.0% | |
| CAAGATCGTATGTGGCTCAA+TGG | - | chr1.4:86204775-86204794 | MS.gene029316:CDS | 45.0% | |
| CAGGTTCAAGTCCTGAAAAC+AGG | - | chr1.4:86206372-86206391 | MS.gene029316:CDS | 45.0% | |
| CAGTGACGATAGATTTCCAG+TGG | - | chr1.4:86206277-86206296 | MS.gene029316:intron | 45.0% | |
| CCAGACAAACTGCATGAAAC+TGG | + | chr1.4:86209419-86209438 | None:intergenic | 45.0% | |
| CCAGTTTCATGCAGTTTGTC+TGG | - | chr1.4:86209416-86209435 | MS.gene029316:intron | 45.0% | |
| CCGTGTATTAGATTGGATGG+TGG | - | chr1.4:86207319-86207338 | MS.gene029316:intron | 45.0% | |
| CGTACAATTCACCAATTGGC+GGG | - | chr1.4:86206423-86206442 | MS.gene029316:CDS | 45.0% | |
| CTAAAGCTCCTGCATAAGCA+GGG | + | chr1.4:86206462-86206481 | None:intergenic | 45.0% | |
| GAATCGGTGGCCATTTGTTT+CGG | - | chr1.4:86207072-86207091 | MS.gene029316:intron | 45.0% | |
| GCAAAAGATGCTGGGATCAA+TGG | - | chr1.4:86210509-86210528 | MS.gene029316:CDS | 45.0% | |
| GCGTACAATTCACCAATTGG+CGG | - | chr1.4:86206422-86206441 | MS.gene029316:CDS | 45.0% | |
| GCTGCGTACAATTCACCAAT+TGG | - | chr1.4:86206419-86206438 | MS.gene029316:CDS | 45.0% | |
| GCTTGTCGTAGCTTATTTGG+GGG | - | chr1.4:86208004-86208023 | MS.gene029316:intron | 45.0% | |
| GGGTATTAAGATCACCAAGG+AGG | - | chr1.4:86205540-86205559 | MS.gene029316:intron | 45.0% | |
| GTCAGTATTAGTGTCGTGTC+TGG | - | chr1.4:86205240-86205259 | MS.gene029316:intron | 45.0% | |
| GTTAGTGTCAATGTCCTGTC+TGG | - | chr1.4:86204953-86204972 | MS.gene029316:CDS | 45.0% | |
| GTTGTTGTCATGTGACTGGA+AGG | - | chr1.4:86206346-86206365 | MS.gene029316:intron | 45.0% | |
| TATATGCACCAGACCAGGAA+GGG | - | chr1.4:86210619-86210638 | MS.gene029316:CDS | 45.0% | |
| TATCCAAGGCCAATATCCAC+TGG | + | chr1.4:86206296-86206315 | None:intergenic | 45.0% | |
| TCACAGAACTGGAGATCACA+TGG | + | chr1.4:86209884-86209903 | None:intergenic | 45.0% | |
| TCTGGCTGATGTGCCATAAT+AGG | + | chr1.4:86206061-86206080 | None:intergenic | 45.0% | |
| TGCTGGGATCAATGGAATAG+AGG | - | chr1.4:86210517-86210536 | MS.gene029316:CDS | 45.0% | |
| TTATATGCACCAGACCAGGA+AGG | - | chr1.4:86210618-86210637 | MS.gene029316:CDS | 45.0% | |
| TTGGCCTCAATTGCGTTGTA+TGG | - | chr1.4:86206520-86206539 | MS.gene029316:intron | 45.0% | |
| ! | ATAATGTGGGCTGCATTGCA+TGG | - | chr1.4:86205892-86205911 | MS.gene029316:CDS | 45.0% |
| ! | CAATTTGCTCCAATCCTCCT+TGG | + | chr1.4:86205557-86205576 | None:intergenic | 45.0% |
| ! | CTGTTTTGCAGTTTATGCCC+TGG | - | chr1.4:86207801-86207820 | MS.gene029316:intron | 45.0% |
| ! | GACACTAACACTAGCACTGA+TGG | + | chr1.4:86204942-86204961 | None:intergenic | 45.0% |
| ! | GACATTCATTAGCTTCCCCA+GGG | + | chr1.4:86207821-86207840 | None:intergenic | 45.0% |
| ! | GCTGCCCTTTTTATTGGACT+CGG | - | chr1.4:86206490-86206509 | MS.gene029316:intron | 45.0% |
| ! | GTTTTGCAGTTTATGCCCTG+GGG | - | chr1.4:86207803-86207822 | MS.gene029316:intron | 45.0% |
| ! | TAATGTGGGCTGCATTGCAT+GGG | - | chr1.4:86205893-86205912 | MS.gene029316:CDS | 45.0% |
| ! | TCCCCCTTGTACTTTTGTGA+TGG | + | chr1.4:86210587-86210606 | None:intergenic | 45.0% |
| ! | TGACATTCATTAGCTTCCCC+AGG | + | chr1.4:86207822-86207841 | None:intergenic | 45.0% |
| ! | TGGCCTTGGATAATAAAGGG+GGG | - | chr1.4:86206304-86206323 | MS.gene029316:intron | 45.0% |
| ! | TGTTTCGGGTACATAATCGG+TGG | - | chr1.4:86207087-86207106 | MS.gene029316:CDS | 45.0% |
| ! | TTTCCAGTGGATATTGGCCT+TGG | - | chr1.4:86206290-86206309 | MS.gene029316:intron | 45.0% |
| ! | TTTGAAGTCGACTCTCTCAC+TGG | - | chr1.4:86208457-86208476 | MS.gene029316:intron | 45.0% |
| !! | CGCCATGTAGAACTTTTTCC+TGG | - | chr1.4:86207497-86207516 | MS.gene029316:intron | 45.0% |
| !!! | GGTTTTAGGAAAAGAGGGAG+GGG | + | chr1.4:86209064-86209083 | None:intergenic | 45.0% |
| !!! | GTTTTAGGAAAAGAGGGAGG+GGG | + | chr1.4:86209063-86209082 | None:intergenic | 45.0% |
| !! | TAATATATTTAAGTATTAAA+TGG | - | chr1.4:86208285-86208304 | MS.gene029316:intron | 5.0% |
| AACCCTACAGTCACTGCAGT+TGG | - | chr1.4:86206579-86206598 | MS.gene029316:intron | 50.0% | |
| AAGAAGGTCAGGGGAAAACG+TGG | + | chr1.4:86206708-86206727 | None:intergenic | 50.0% | |
| AAGGAAACTAGCAGCACCTC+AGG | - | chr1.4:86208866-86208885 | MS.gene029316:intron | 50.0% | |
| ACCTTGCAATAGCAGACAGC+TGG | + | chr1.4:86207858-86207877 | None:intergenic | 50.0% | |
| AGAACGGTGAAGAAGGTCAG+GGG | + | chr1.4:86206717-86206736 | None:intergenic | 50.0% | |
| AGAAGGTCAGGGGAAAACGT+GGG | + | chr1.4:86206707-86206726 | None:intergenic | 50.0% | |
| AGTTCCAGACTTCTGGTGTC+TGG | - | chr1.4:86207227-86207246 | MS.gene029316:intron | 50.0% | |
| ATATGCACCAGACCAGGAAG+GGG | - | chr1.4:86210620-86210639 | MS.gene029316:CDS | 50.0% | |
| CAAATACACGGACACCAGAC+AGG | + | chr1.4:86204970-86204989 | None:intergenic | 50.0% | |
| CCTGTGGAGCTTCTTCTGAA+CGG | + | chr1.4:86209623-86209642 | None:intergenic | 50.0% | |
| CGTGCAATTAGAACCGCGTT+TGG | + | chr1.4:86210290-86210309 | None:intergenic | 50.0% | |
| CTTCACCGTTCTCACCATTG+TGG | - | chr1.4:86206725-86206744 | MS.gene029316:intron | 50.0% | |
| GAGAACGGTGAAGAAGGTCA+GGG | + | chr1.4:86206718-86206737 | None:intergenic | 50.0% | |
| GAGTAGCAGTTCCAGACTTC+TGG | - | chr1.4:86207220-86207239 | MS.gene029316:intron | 50.0% | |
| GCGCAGAGAGACATATTTCG+TGG | + | chr1.4:86205361-86205380 | None:intergenic | 50.0% | |
| GCTTGAAAGTAGGGAGGTCT+TGG | + | chr1.4:86209104-86209123 | None:intergenic | 50.0% | |
| GGATCTCCCTTAAACAGCTC+TGG | + | chr1.4:86205486-86205505 | None:intergenic | 50.0% | |
| GGCCTTGGATAATAAAGGGG+GGG | - | chr1.4:86206305-86206324 | MS.gene029316:intron | 50.0% | |
| GTCCAACTGCAGTGACTGTA+GGG | + | chr1.4:86206584-86206603 | None:intergenic | 50.0% | |
| GTCCAATAAAAAGGGCAGCC+TGG | + | chr1.4:86206489-86206508 | None:intergenic | 50.0% | |
| GTTGTGGTGCAAAGATGAGC+GGG | + | chr1.4:86204727-86204746 | None:intergenic | 50.0% | |
| TCATGTGACTGGAAGGTCAC+AGG | - | chr1.4:86206353-86206372 | MS.gene029316:intron | 50.0% | |
| TCGTATGTGGCTCAATGGCA+AGG | - | chr1.4:86204780-86204799 | MS.gene029316:CDS | 50.0% | |
| TGAGAACGGTGAAGAAGGTC+AGG | + | chr1.4:86206719-86206738 | None:intergenic | 50.0% | |
| TGCAGTGGGGAAGTTGTTGT+AGG | + | chr1.4:86205596-86205615 | None:intergenic | 50.0% | |
| TGTCCAACTGCAGTGACTGT+AGG | + | chr1.4:86206585-86206604 | None:intergenic | 50.0% | |
| ! | CACCAGGCTGCCCTTTTTAT+TGG | - | chr1.4:86206484-86206503 | MS.gene029316:intron | 50.0% |
| ! | CTAGGTTAGCTCTCGGCAAA+AGG | - | chr1.4:86208847-86208866 | MS.gene029316:intron | 50.0% |
| ! | TGGAGGGAAGAGAGTTTTGC+AGG | + | chr1.4:86210463-86210482 | None:intergenic | 50.0% |
| !! | GGGTGATAGTTGGGTACTGA+TGG | - | chr1.4:86204597-86204616 | MS.gene029316:CDS | 50.0% |
| !! | TGGATTGGCTTCATCAGCTG+CGG | - | chr1.4:86205618-86205637 | MS.gene029316:intron | 50.0% |
| AACAACTTCCCCACTGCAGC+TGG | - | chr1.4:86205598-86205617 | MS.gene029316:intron | 55.0% | |
| AAGCCAATCCAGCTGCAGTG+GGG | + | chr1.4:86205609-86205628 | None:intergenic | 55.0% | |
| AGCCAACGCCAGACAGATGA+CGG | + | chr1.4:86206876-86206895 | None:intergenic | 55.0% | |
| CATAAGCAGGGTTCGGGAAG+GGG | + | chr1.4:86206450-86206469 | None:intergenic | 55.0% | |
| CCGTTCAGAAGAAGCTCCAC+AGG | - | chr1.4:86209620-86209639 | MS.gene029316:intron | 55.0% | |
| CGACTCTCTCACTGGAAGTG+CGG | - | chr1.4:86208465-86208484 | MS.gene029316:intron | 55.0% | |
| CTCCTGCATAAGCAGGGTTC+GGG | + | chr1.4:86206456-86206475 | None:intergenic | 55.0% | |
| CTGGAACTGCTACTCTGTGC+TGG | + | chr1.4:86207215-86207234 | None:intergenic | 55.0% | |
| GAAGCCAATCCAGCTGCAGT+GGG | + | chr1.4:86205610-86205629 | None:intergenic | 55.0% | |
| GCATAAGCAGGGTTCGGGAA+GGG | + | chr1.4:86206451-86206470 | None:intergenic | 55.0% | |
| GCCAGCTGTCTGCTATTGCA+AGG | - | chr1.4:86207854-86207873 | MS.gene029316:intron | 55.0% | |
| GCTCCTGCATAAGCAGGGTT+CGG | + | chr1.4:86206457-86206476 | None:intergenic | 55.0% | |
| GGATAATAAAGGGGGGGCCT+TGG | - | chr1.4:86206311-86206330 | MS.gene029316:intron | 55.0% | |
| GGCCCCCCCTTTATTATCCA+AGG | + | chr1.4:86206310-86206329 | None:intergenic | 55.0% | |
| GTTTGATGCAGGGCCAAACG+CGG | - | chr1.4:86210274-86210293 | MS.gene029316:intron | 55.0% | |
| TGAAGCCAATCCAGCTGCAG+TGG | + | chr1.4:86205611-86205630 | None:intergenic | 55.0% | |
| TGCATAAGCAGGGTTCGGGA+AGG | + | chr1.4:86206452-86206471 | None:intergenic | 55.0% | |
| TTCCCGAACCCTGCTTATGC+AGG | - | chr1.4:86206451-86206470 | MS.gene029316:intron | 55.0% | |
| ! | TGCAGGAGCTTTAGTGCACC+AGG | - | chr1.4:86206468-86206487 | MS.gene029316:intron | 55.0% |
| !! | ACAGCTCTGGAATCTTCCCC+CGG | + | chr1.4:86205473-86205492 | None:intergenic | 55.0% |
| !! | GGATTGGCTTCATCAGCTGC+GGG | - | chr1.4:86205619-86205638 | MS.gene029316:intron | 55.0% |
| AAAAGAGGGAGGGGGAGAGG+TGG | + | chr1.4:86209055-86209074 | None:intergenic | 60.0% | |
| AACAGGTCCCCTTCCTGGTC+TGG | + | chr1.4:86210630-86210649 | None:intergenic | 60.0% | |
| AGCACAACAGGTCCCCTTCC+TGG | + | chr1.4:86210635-86210654 | None:intergenic | 60.0% | |
| AGGAAAAGAGGGAGGGGGAG+AGG | + | chr1.4:86209058-86209077 | None:intergenic | 60.0% | |
| CAACATCACACGCGCGAGCA+CGG | + | chr1.4:86205507-86205526 | None:intergenic | 60.0% | |
| CTTCCCCACTGCAGCTGGAT+TGG | - | chr1.4:86205603-86205622 | MS.gene029316:intron | 60.0% | |
| GCTGCGGGTTTCGCTTGTCT+TGG | - | chr1.4:86205634-86205653 | MS.gene029316:intron | 60.0% | |
| TCTCCCTGCCGTCATCTGTC+TGG | - | chr1.4:86206865-86206884 | MS.gene029316:intron | 60.0% | |
| TGCCGTCATCTGTCTGGCGT+TGG | - | chr1.4:86206871-86206890 | MS.gene029316:intron | 60.0% | |
| TGCTCGCGCGTGTGATGTTG+AGG | - | chr1.4:86205507-86205526 | MS.gene029316:intron | 60.0% | |
| ! | AACGCCAGACAGATGACGGC+AGG | + | chr1.4:86206872-86206891 | None:intergenic | 60.0% |
| ! | ACGCCAGACAGATGACGGCA+GGG | + | chr1.4:86206871-86206890 | None:intergenic | 60.0% |
| !! | CATCTGTCTGGCGTTGGCTG+CGG | - | chr1.4:86206877-86206896 | MS.gene029316:intron | 60.0% |
| ! | AAGGGGGGGCCTTGGTGCAA+AGG | - | chr1.4:86206319-86206338 | MS.gene029316:intron | 65.0% |
| !! | CTGGCGTTGGCTGCGGACAT+CGG | - | chr1.4:86206884-86206903 | MS.gene029316:intron | 65.0% |
| CGGGAAGGGGTCCCGCCAAT+TGG | + | chr1.4:86206437-86206456 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 86204592 | 86210706 | 86204592 | ID=MS.gene029316 |
| chr1.4 | mRNA | 86204592 | 86210706 | 86204592 | ID=MS.gene029316.t1;Parent=MS.gene029316 |
| chr1.4 | exon | 86210497 | 86210706 | 86210497 | ID=MS.gene029316.t1.exon1;Parent=MS.gene029316.t1 |
| chr1.4 | CDS | 86210497 | 86210706 | 86210497 | ID=cds.MS.gene029316.t1;Parent=MS.gene029316.t1 |
| chr1.4 | exon | 86209643 | 86209841 | 86209643 | ID=MS.gene029316.t1.exon2;Parent=MS.gene029316.t1 |
| chr1.4 | CDS | 86209643 | 86209841 | 86209643 | ID=cds.MS.gene029316.t1;Parent=MS.gene029316.t1 |
| chr1.4 | exon | 86207423 | 86207486 | 86207423 | ID=MS.gene029316.t1.exon3;Parent=MS.gene029316.t1 |
| chr1.4 | CDS | 86207423 | 86207486 | 86207423 | ID=cds.MS.gene029316.t1;Parent=MS.gene029316.t1 |
| chr1.4 | exon | 86207247 | 86207310 | 86207247 | ID=MS.gene029316.t1.exon4;Parent=MS.gene029316.t1 |
| chr1.4 | CDS | 86207247 | 86207310 | 86207247 | ID=cds.MS.gene029316.t1;Parent=MS.gene029316.t1 |
| chr1.4 | exon | 86207086 | 86207166 | 86207086 | ID=MS.gene029316.t1.exon5;Parent=MS.gene029316.t1 |
| chr1.4 | CDS | 86207086 | 86207166 | 86207086 | ID=cds.MS.gene029316.t1;Parent=MS.gene029316.t1 |
| chr1.4 | exon | 86206361 | 86206447 | 86206361 | ID=MS.gene029316.t1.exon6;Parent=MS.gene029316.t1 |
| chr1.4 | CDS | 86206361 | 86206447 | 86206361 | ID=cds.MS.gene029316.t1;Parent=MS.gene029316.t1 |
| chr1.4 | exon | 86205817 | 86205974 | 86205817 | ID=MS.gene029316.t1.exon7;Parent=MS.gene029316.t1 |
| chr1.4 | CDS | 86205817 | 86205974 | 86205817 | ID=cds.MS.gene029316.t1;Parent=MS.gene029316.t1 |
| chr1.4 | exon | 86205657 | 86205705 | 86205657 | ID=MS.gene029316.t1.exon8;Parent=MS.gene029316.t1 |
| chr1.4 | CDS | 86205657 | 86205705 | 86205657 | ID=cds.MS.gene029316.t1;Parent=MS.gene029316.t1 |
| chr1.4 | exon | 86204914 | 86205035 | 86204914 | ID=MS.gene029316.t1.exon9;Parent=MS.gene029316.t1 |
| chr1.4 | CDS | 86204914 | 86205035 | 86204914 | ID=cds.MS.gene029316.t1;Parent=MS.gene029316.t1 |
| chr1.4 | exon | 86204592 | 86204814 | 86204592 | ID=MS.gene029316.t1.exon10;Parent=MS.gene029316.t1 |
| chr1.4 | CDS | 86204592 | 86204814 | 86204592 | ID=cds.MS.gene029316.t1;Parent=MS.gene029316.t1 |
| Gene Sequence |
| Protein sequence |
