Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029387.t1 | XP_013470199.1 | 96.3 | 465 | 10 | 1 | 1 | 465 | 13 | 470 | 3.40E-217 | 764.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029387.t1 | Q9SQI8 | 73.6 | 466 | 115 | 3 | 2 | 465 | 21 | 480 | 1.3e-153 | 544.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029387.t1 | A0A072VR15 | 96.3 | 465 | 10 | 1 | 1 | 465 | 13 | 470 | 2.5e-217 | 764.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene84379 | MS.gene029387 | PPI |
| MS.gene029387 | MS.gene51623 | PPI |
| MS.gene009450 | MS.gene029387 | PPI |
| MS.gene029387 | MS.gene56252 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029387.t1 | MTR_1g111140 | 95.940 | 468 | 9 | 3 | 1 | 465 | 10 | 470 | 0.0 | 889 |
| MS.gene029387.t1 | MTR_1g096240 | 63.111 | 450 | 148 | 5 | 21 | 465 | 21 | 457 | 7.93e-178 | 506 |
| MS.gene029387.t1 | MTR_8g018770 | 33.480 | 454 | 252 | 12 | 37 | 465 | 115 | 543 | 1.49e-64 | 218 |
| MS.gene029387.t1 | MTR_1g091037 | 31.591 | 440 | 267 | 11 | 41 | 465 | 205 | 625 | 4.43e-51 | 183 |
| MS.gene029387.t1 | MTR_1g091037 | 34.711 | 121 | 70 | 2 | 41 | 152 | 79 | 199 | 9.15e-13 | 70.9 |
| MS.gene029387.t1 | MTR_1g091037 | 31.591 | 440 | 267 | 11 | 41 | 465 | 213 | 633 | 4.94e-51 | 183 |
| MS.gene029387.t1 | MTR_1g091037 | 34.711 | 121 | 70 | 2 | 41 | 152 | 87 | 207 | 8.76e-13 | 70.9 |
| MS.gene029387.t1 | MTR_4g120220 | 27.546 | 432 | 296 | 7 | 48 | 465 | 89 | 517 | 5.49e-30 | 122 |
| MS.gene029387.t1 | MTR_5g093300 | 25.116 | 430 | 256 | 11 | 38 | 465 | 88 | 453 | 2.28e-28 | 117 |
| MS.gene029387.t1 | MTR_2g006820 | 24.490 | 441 | 246 | 9 | 38 | 465 | 85 | 451 | 6.62e-28 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029387.t1 | AT3G25860 | 72.103 | 466 | 122 | 3 | 2 | 465 | 21 | 480 | 0.0 | 620 |
| MS.gene029387.t1 | AT1G34430 | 59.283 | 474 | 165 | 5 | 7 | 465 | 5 | 465 | 1.62e-175 | 500 |
| MS.gene029387.t1 | AT1G54220 | 34.852 | 439 | 265 | 9 | 37 | 465 | 112 | 539 | 1.63e-65 | 220 |
| MS.gene029387.t1 | AT1G54220 | 34.852 | 439 | 265 | 9 | 37 | 465 | 112 | 539 | 1.63e-65 | 220 |
| MS.gene029387.t1 | AT3G13930 | 33.105 | 438 | 274 | 7 | 37 | 465 | 112 | 539 | 3.15e-60 | 206 |
| MS.gene029387.t1 | AT3G52200 | 32.045 | 440 | 265 | 10 | 41 | 465 | 217 | 637 | 8.89e-53 | 188 |
| MS.gene029387.t1 | AT3G52200 | 36.800 | 125 | 75 | 2 | 41 | 161 | 90 | 214 | 2.38e-15 | 79.0 |
| MS.gene029387.t1 | AT3G52200 | 32.045 | 440 | 265 | 10 | 41 | 465 | 293 | 713 | 2.12e-52 | 188 |
| MS.gene029387.t1 | AT3G52200 | 36.800 | 125 | 75 | 2 | 41 | 161 | 166 | 290 | 1.37e-15 | 79.7 |
| MS.gene029387.t1 | AT4G26910 | 25.373 | 469 | 273 | 15 | 12 | 465 | 55 | 461 | 1.18e-29 | 121 |
| MS.gene029387.t1 | AT4G26910 | 25.522 | 431 | 256 | 13 | 38 | 465 | 94 | 462 | 1.44e-29 | 120 |
| MS.gene029387.t1 | AT4G26910 | 25.412 | 425 | 252 | 13 | 44 | 465 | 1 | 363 | 1.01e-28 | 117 |
| MS.gene029387.t1 | AT3G06850 | 25.463 | 432 | 270 | 8 | 48 | 465 | 87 | 480 | 2.82e-28 | 117 |
| MS.gene029387.t1 | AT3G06850 | 25.463 | 432 | 270 | 8 | 48 | 465 | 87 | 480 | 2.82e-28 | 117 |
| MS.gene029387.t1 | AT5G55070 | 33.155 | 187 | 118 | 4 | 281 | 465 | 281 | 462 | 3.21e-21 | 96.3 |
| MS.gene029387.t1 | AT5G55070 | 33.155 | 187 | 118 | 4 | 281 | 465 | 281 | 462 | 3.21e-21 | 96.3 |
Find 134 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTTTCACGCTTTCCAATT+TGG | 0.148648 | 1.4:+84751308 | MS.gene029387:CDS |
| GCTGATCACCGAATAATTTA+TGG | 0.190235 | 1.4:+84753591 | MS.gene029387:CDS |
| TGCTGCACCAGCTGCGATTC+CGG | 0.219139 | 1.4:+84750311 | MS.gene029387:CDS |
| CAACCAAATGAGTATAATTC+AGG | 0.242664 | 1.4:+84751199 | MS.gene029387:CDS |
| GGGAGGAGCGGTGAGGGAGG+AGG | 0.245830 | 1.4:-84749651 | None:intergenic |
| TGTGACGATGACTGCTATTT+TGG | 0.262165 | 1.4:+84750882 | MS.gene029387:CDS |
| AACTCCAAACATACCCAAAT+TGG | 0.269101 | 1.4:-84751322 | None:intergenic |
| GCGGATGTGGAGGCTGCTGC+TGG | 0.275235 | 1.4:+84750213 | MS.gene029387:CDS |
| AAAGTTCTTGCCATCTTTGC+AGG | 0.290313 | 1.4:-84750953 | None:intergenic |
| ACTTTCACGCTTTCCAATTT+GGG | 0.319099 | 1.4:+84751309 | MS.gene029387:CDS |
| CTTTCCAATTTGGGTATGTT+TGG | 0.319328 | 1.4:+84751318 | MS.gene029387:CDS |
| AAACCTGAATTATACTCATT+TGG | 0.322353 | 1.4:-84751202 | None:intergenic |
| CTTGATAACTCCAGTTCTTC+AGG | 0.323849 | 1.4:+84751026 | MS.gene029387:CDS |
| GCTGCACCAGCTGCGATTCC+GGG | 0.340411 | 1.4:+84750312 | MS.gene029387:CDS |
| TGAAGAATAACTATAATGTT+AGG | 0.344401 | 1.4:-84753671 | None:intergenic |
| AACCTGGCCTGGTGGAAGTA+TGG | 0.348432 | 1.4:-84751358 | None:intergenic |
| GGAAAAGGATTTGCGGGGAG+GGG | 0.354418 | 1.4:-84749671 | None:intergenic |
| GAGGGGAGGAGCGGTGAGGG+AGG | 0.354889 | 1.4:-84749654 | None:intergenic |
| CTGTTCCTACTTTCCGTGTT+GGG | 0.363238 | 1.4:+84750400 | MS.gene029387:CDS |
| TGAATCTGATAAGGCTGATA+TGG | 0.376491 | 1.4:+84749825 | MS.gene029387:CDS |
| GCCGCCGGTGGAGGCGGTGG+TGG | 0.387927 | 1.4:-84750063 | None:intergenic |
| TCAAGAGCATCAGTGATAAC+TGG | 0.389979 | 1.4:-84750426 | None:intergenic |
| CGCCGGAGGAGGAGAGGAAG+AGG | 0.399022 | 1.4:-84750010 | None:intergenic |
| GGAGGAGAGTGGTGAATTGA+GGG | 0.399212 | 1.4:-84749633 | None:intergenic |
| AGGAGGAGAGTGGTGAATTG+AGG | 0.399224 | 1.4:-84749634 | None:intergenic |
| TTTGAAGGAAAAGGATTTGC+GGG | 0.403176 | 1.4:-84749677 | None:intergenic |
| CGGATTTGACGGATTTAGCC+TGG | 0.408800 | 1.4:-84749972 | None:intergenic |
| TTATCAGCATCCTGAAGAAC+TGG | 0.417467 | 1.4:-84751036 | None:intergenic |
| GCTCCGGTTGGTGCTCCAAT+TGG | 0.424384 | 1.4:+84749907 | MS.gene029387:CDS |
| GCCGGTGGAGGCGGTGGTGG+AGG | 0.425148 | 1.4:-84750060 | None:intergenic |
| ACCGCCGCCGGTGGAGGCGG+TGG | 0.426146 | 1.4:-84750066 | None:intergenic |
| AGTTCTTCAGGATGCTGATA+AGG | 0.430433 | 1.4:+84751038 | MS.gene029387:CDS |
| AGTCAGCTCCATAAATTATT+CGG | 0.431962 | 1.4:-84753599 | None:intergenic |
| CGGGGAGGGGAGGAGCGGTG+AGG | 0.432565 | 1.4:-84749658 | None:intergenic |
| TTAACCGCCGCCGGTGGAGG+CGG | 0.434204 | 1.4:-84750069 | None:intergenic |
| AAAGGATTTGCGGGGAGGGG+AGG | 0.434206 | 1.4:-84749668 | None:intergenic |
| TTGCAGGTGGCATTAACAAC+TGG | 0.437102 | 1.4:-84750937 | None:intergenic |
| GGTGGAGGCGGTGGTGGAGG+AGG | 0.439450 | 1.4:-84750057 | None:intergenic |
| GCAGTCATCGTCACACCCTT+AGG | 0.441303 | 1.4:-84750874 | None:intergenic |
| TCCTCCTCCGGCGACTCCTC+AGG | 0.441707 | 1.4:+84750020 | MS.gene029387:CDS |
| TAGGATTACTCCGGCGGATG+TGG | 0.442153 | 1.4:+84750200 | MS.gene029387:CDS |
| CCTTTAGGCGCGGTGGGAGC+AGG | 0.450725 | 1.4:-84750276 | None:intergenic |
| CCTGCTCCCACCGCGCCTAA+AGG | 0.451441 | 1.4:+84750276 | MS.gene029387:CDS |
| AGAAGAAGAAGCGGATTTGA+CGG | 0.452525 | 1.4:-84749983 | None:intergenic |
| TCTGTTCCTACTTTCCGTGT+TGG | 0.452700 | 1.4:+84750399 | MS.gene029387:CDS |
| AACAACGACACTATCACCTT+TGG | 0.458858 | 1.4:-84749800 | None:intergenic |
| GTTAATGCCACCTGCAAAGA+TGG | 0.461294 | 1.4:+84750943 | MS.gene029387:CDS |
| AGGAAAAGGATTTGCGGGGA+GGG | 0.466496 | 1.4:-84749672 | None:intergenic |
| GTCAATGGGACTGGTCCGTT+TGG | 0.467430 | 1.4:+84750177 | MS.gene029387:CDS |
| TTCCTCTTCCTCTCCTCCTC+CGG | 0.468287 | 1.4:+84750008 | MS.gene029387:CDS |
| GTTTCAGCAAGTAAACCAAT+TGG | 0.469325 | 1.4:-84749922 | None:intergenic |
| TGTATCTGTTGTCTCAAAAG+TGG | 0.473862 | 1.4:+84751140 | MS.gene029387:CDS |
| TGCCATACTTCCACCAGGCC+AGG | 0.474712 | 1.4:+84751356 | MS.gene029387:CDS |
| CGTTGTTGTTGAATCTGATA+AGG | 0.474840 | 1.4:+84749816 | MS.gene029387:CDS |
| GCAGTAGAAGAACCACCTTT+AGG | 0.475879 | 1.4:-84750291 | None:intergenic |
| TTTGGAGAGAGTGTCGCCTT+CGG | 0.478453 | 1.4:-84749782 | None:intergenic |
| CGGATGTGGAGGCTGCTGCT+GGG | 0.484662 | 1.4:+84750214 | MS.gene029387:CDS |
| TCCTGAGGAGTCGCCGGAGG+AGG | 0.486371 | 1.4:-84750021 | None:intergenic |
| ATTTGCGGGGAGGGGAGGAG+CGG | 0.486564 | 1.4:-84749663 | None:intergenic |
| GGGGAGGGGAGGAGCGGTGA+GGG | 0.488786 | 1.4:-84749657 | None:intergenic |
| GCGGTGAGGGAGGAGGAGAG+TGG | 0.492755 | 1.4:-84749644 | None:intergenic |
| GTTGACATTGCATCAGTCAA+TGG | 0.493986 | 1.4:+84750162 | MS.gene029387:CDS |
| GACTTAACCGCCGCCGGTGG+AGG | 0.494592 | 1.4:-84750072 | None:intergenic |
| AAACCAATTGGAGCACCAAC+CGG | 0.494669 | 1.4:-84749910 | None:intergenic |
| AATAATTTATGGAGCTGACT+TGG | 0.504990 | 1.4:+84753602 | MS.gene029387:CDS |
| CCGAGGGTAAAATCGTCTCT+TGG | 0.507291 | 1.4:+84749752 | MS.gene029387:CDS |
| TCCTCCACCACCGCCTCCAC+CGG | 0.509369 | 1.4:+84750059 | MS.gene029387:CDS |
| AAATAAGCACTAACCTGGCC+TGG | 0.510203 | 1.4:-84751369 | None:intergenic |
| TTTGGCGAAGGCTGTAGCTA+TGG | 0.511396 | 1.4:+84750900 | MS.gene029387:CDS |
| TTGACATTGCATCAGTCAAT+GGG | 0.511963 | 1.4:+84750163 | MS.gene029387:CDS |
| CAGAGTGAAAAGTAAAATGC+TGG | 0.512136 | 1.4:+84751551 | MS.gene029387:CDS |
| GAAGCTTGCAAAGCAGCATA+AGG | 0.516061 | 1.4:+84750140 | MS.gene029387:CDS |
| AGATTTCACGGATCTTAGCT+TGG | 0.518622 | 1.4:-84749702 | None:intergenic |
| CAAAAGTGGAAAGAACTAGT+TGG | 0.519897 | 1.4:+84751154 | MS.gene029387:CDS |
| ATGGGACTGGTCCGTTTGGT+AGG | 0.522274 | 1.4:+84750181 | MS.gene029387:CDS |
| TTTGCAAGCTTCTTCGCTTG+AGG | 0.523490 | 1.4:-84750129 | None:intergenic |
| ACCACCGCCTCCACCGGCGG+CGG | 0.527835 | 1.4:+84750065 | MS.gene029387:CDS |
| CTCGAACCCGGAATCGCAGC+TGG | 0.528731 | 1.4:-84750318 | None:intergenic |
| CAATAGTAACATTAATGTTG+CGG | 0.528854 | 1.4:+84750981 | MS.gene029387:CDS |
| TGCTGTTGCTAAGAATATGA+TGG | 0.531804 | 1.4:+84750368 | MS.gene029387:CDS |
| GCTCCCACCGCGCCTAAAGG+TGG | 0.537172 | 1.4:+84750279 | MS.gene029387:CDS |
| ACTGTTCTTGCTGATACAGA+TGG | 0.538342 | 1.4:+84751522 | MS.gene029387:CDS |
| GTGCAGGCATGAAGATTTCA+CGG | 0.539099 | 1.4:-84749714 | None:intergenic |
| AGGAGTCGCCGGAGGAGGAG+AGG | 0.540356 | 1.4:-84750016 | None:intergenic |
| GCGGTTAAGTCTGTTTCCGA+TGG | 0.542027 | 1.4:+84750084 | MS.gene029387:CDS |
| CGACGAAGGCGAAACAGCTC+CGG | 0.544268 | 1.4:+84749891 | MS.gene029387:CDS |
| AAGGAAAAGGATTTGCGGGG+AGG | 0.547486 | 1.4:-84749673 | None:intergenic |
| GTGGAAAGAACTAGTTGGAA+AGG | 0.549323 | 1.4:+84751159 | MS.gene029387:CDS |
| GCCGCTATCGTTGTCGACGA+AGG | 0.556593 | 1.4:+84749877 | MS.gene029387:CDS |
| TATCGCTGAAGCTCAAGCCC+AGG | 0.558264 | 1.4:+84749954 | MS.gene029387:CDS |
| TCTTGATGCTTTCTATGAGA+AGG | 0.560121 | 1.4:+84750443 | MS.gene029387:CDS |
| GGTGATGAGTAATGTAGCTC+CGG | 0.561935 | 1.4:+84750245 | MS.gene029387:CDS |
| GAAGTTTCCTGAGGAGTCGC+CGG | 0.562506 | 1.4:-84750027 | None:intergenic |
| GTCATAGTGGAACTGAGTGC+AGG | 0.565894 | 1.4:-84749730 | None:intergenic |
| GATTACTCCGGCGGATGTGG+AGG | 0.566437 | 1.4:+84750203 | MS.gene029387:CDS |
| GGATACCCAACACGGAAAGT+AGG | 0.566850 | 1.4:-84750405 | None:intergenic |
| GAACCACCTTTAGGCGCGGT+GGG | 0.571512 | 1.4:-84750282 | None:intergenic |
| TTTAGAGAATGTCTGAAGGA+AGG | 0.571872 | 1.4:-84753628 | None:intergenic |
| GCAGCAGCCTCCACATCCGC+CGG | 0.578668 | 1.4:-84750210 | None:intergenic |
| TCTGTATCAGCAAGAACAGT+GGG | 0.580486 | 1.4:-84751519 | None:intergenic |
| GTGGGAGCAGGAGTCGCCAC+CGG | 0.583580 | 1.4:-84750264 | None:intergenic |
| ATTGCATCAGTCAATGGGAC+TGG | 0.584574 | 1.4:+84750168 | MS.gene029387:CDS |
| GGATTTGACGGATTTAGCCT+GGG | 0.588827 | 1.4:-84749971 | None:intergenic |
| GAGGAGAGTGGTGAATTGAG+GGG | 0.588927 | 1.4:-84749632 | None:intergenic |
| GCCGGAGTAATCCTACCAAA+CGG | 0.596459 | 1.4:-84750192 | None:intergenic |
| GTTCTTGCCATCTTTGCAGG+TGG | 0.598180 | 1.4:-84750950 | None:intergenic |
| CATTAATGTTGCGGTTGCTG+TGG | 0.599216 | 1.4:+84750990 | MS.gene029387:CDS |
| GCGGTTGCTGTGGCAATCAA+CGG | 0.599221 | 1.4:+84751000 | MS.gene029387:CDS |
| TCCACCACCGCCTCCACCGG+CGG | 0.601506 | 1.4:+84750062 | MS.gene029387:CDS |
| TCCGTTTGGTAGGATTACTC+CGG | 0.603724 | 1.4:+84750191 | MS.gene029387:CDS |
| AGAACCACCTTTAGGCGCGG+TGG | 0.612275 | 1.4:-84750283 | None:intergenic |
| GAAACAGACTTAACCGCCGC+CGG | 0.613417 | 1.4:-84750078 | None:intergenic |
| ACAGACTTAACCGCCGCCGG+TGG | 0.613983 | 1.4:-84750075 | None:intergenic |
| CTCAGTTCCACTATGACCGA+GGG | 0.618720 | 1.4:+84749736 | MS.gene029387:CDS |
| GCCTTCGTCGACAACGATAG+CGG | 0.619826 | 1.4:-84749878 | None:intergenic |
| GGAGCTACATTACTCATCAC+CGG | 0.621644 | 1.4:-84750243 | None:intergenic |
| GTCTCTTGGATCAAATCCGA+AGG | 0.623986 | 1.4:+84749766 | MS.gene029387:CDS |
| TTGAAGGAAAAGGATTTGCG+GGG | 0.626517 | 1.4:-84749676 | None:intergenic |
| GACGTTGAAACTTTCTACGA+CGG | 0.630695 | 1.4:+84749847 | MS.gene029387:CDS |
| GTTTCCTGAGGAGTCGCCGG+AGG | 0.633462 | 1.4:-84750024 | None:intergenic |
| ACTCAGTTCCACTATGACCG+AGG | 0.633716 | 1.4:+84749735 | MS.gene029387:CDS |
| GATGAGTAATGTAGCTCCGG+TGG | 0.634350 | 1.4:+84750248 | MS.gene029387:CDS |
| TTTGATGCCATACTTCCACC+AGG | 0.635423 | 1.4:+84751351 | MS.gene029387:CDS |
| GTTTGGTAGGATTACTCCGG+CGG | 0.637694 | 1.4:+84750194 | MS.gene029387:CDS |
| GGCTGCTGCTGGGATTACAC+CGG | 0.642960 | 1.4:+84750224 | MS.gene029387:CDS |
| GAAGGCGACACTCTCTCCAA+AGG | 0.645069 | 1.4:+84749784 | MS.gene029387:CDS |
| GAAGGCGAAACAGCTCCGGT+TGG | 0.650328 | 1.4:+84749895 | MS.gene029387:CDS |
| TAAGCACTAACCTGGCCTGG+TGG | 0.654901 | 1.4:-84751366 | None:intergenic |
| ATCTGTATCAGCAAGAACAG+TGG | 0.662950 | 1.4:-84751520 | None:intergenic |
| AAAGCAACATTACTCGAACC+CGG | 0.665722 | 1.4:-84750330 | None:intergenic |
| GGAGACTGAGAAGTTTCCTG+AGG | 0.667713 | 1.4:-84750036 | None:intergenic |
| GTTGCTGTGGCAATCAACGG+TGG | 0.689072 | 1.4:+84751003 | MS.gene029387:CDS |
| AGAAGAACCACCTTTAGGCG+CGG | 0.690205 | 1.4:-84750286 | None:intergenic |
| TGATAACTGGATACCCAACA+CGG | 0.715114 | 1.4:-84750413 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTAAATATTATTATTGTAT+TGG | + | chr1.4:84750554-84750573 | MS.gene029387:intron | 10.0% |
| !! | TAATTTATAAAATTTGAACA+CGG | - | chr1.4:84753297-84753316 | None:intergenic | 10.0% |
| !!! | ATTGTTTAATTTGAAAATTT+AGG | + | chr1.4:84750768-84750787 | MS.gene029387:intron | 10.0% |
| !!! | ATTGTTTGATTTTTAAATTT+TGG | + | chr1.4:84750516-84750535 | MS.gene029387:intron | 10.0% |
| !! | ATTGAATATTATTGTTGTAT+TGG | + | chr1.4:84750810-84750829 | MS.gene029387:intron | 15.0% |
| !!! | AACATTTTCTTAATAGAATA+AGG | + | chr1.4:84751660-84751679 | MS.gene029387:intron | 15.0% |
| !!! | AATTTTAAATTATATCTGAG+TGG | + | chr1.4:84751796-84751815 | MS.gene029387:intron | 15.0% |
| !!! | TCAGATATAATTTAAAATTC+AGG | - | chr1.4:84751795-84751814 | None:intergenic | 15.0% |
| !! | AAAATCTTATAACTATGCAA+TGG | - | chr1.4:84753012-84753031 | None:intergenic | 20.0% |
| !! | AACATACTATATTATATGCA+TGG | + | chr1.4:84752352-84752371 | MS.gene029387:intron | 20.0% |
| !! | AAGACTTTATTATACAATAG+AGG | - | chr1.4:84752130-84752149 | None:intergenic | 20.0% |
| !! | ATATCAATCACAATCAAAAT+AGG | + | chr1.4:84752928-84752947 | MS.gene029387:intron | 20.0% |
| !! | ATCATGATAGATGTATTATT+TGG | + | chr1.4:84753406-84753425 | MS.gene029387:intron | 20.0% |
| !! | ATCTTAAAATTCATAAAGTG+CGG | + | chr1.4:84751991-84752010 | MS.gene029387:intron | 20.0% |
| !! | CATAGTAAAGAAATAGTATA+TGG | + | chr1.4:84752794-84752813 | MS.gene029387:intron | 20.0% |
| !! | TAAGAACAAATGATTTCATA+TGG | - | chr1.4:84753510-84753529 | None:intergenic | 20.0% |
| !! | TAATTTGAAAATTTAGGTGA+TGG | + | chr1.4:84750774-84750793 | MS.gene029387:intron | 20.0% |
| !! | TTGAGAAATAGAAAATTCAT+AGG | - | chr1.4:84752017-84752036 | None:intergenic | 20.0% |
| !!! | AAGATTAGAAAAAAGCATTA+TGG | - | chr1.4:84751976-84751995 | None:intergenic | 20.0% |
| !!! | CATATACTATTTCTTTACTA+TGG | - | chr1.4:84752796-84752815 | None:intergenic | 20.0% |
| !!! | TAAACTTGTCATTTATTTCA+GGG | + | chr1.4:84751468-84751487 | MS.gene029387:intron | 20.0% |
| !!! | TGATTTTTAAATTTTGGTGA+TGG | + | chr1.4:84750522-84750541 | MS.gene029387:intron | 20.0% |
| !!! | TTAAACTTGTCATTTATTTC+AGG | + | chr1.4:84751467-84751486 | MS.gene029387:intron | 20.0% |
| !!! | TTTCTGAAATGTTAACTATA+GGG | + | chr1.4:84751763-84751782 | MS.gene029387:intron | 20.0% |
| !!! | TTTTCTGAAATGTTAACTAT+AGG | + | chr1.4:84751762-84751781 | MS.gene029387:intron | 20.0% |
| ! | AAACCTGAATTATACTCATT+TGG | - | chr1.4:84751205-84751224 | None:intergenic | 25.0% |
| ! | AAGTGTATAGATTCTTCAAA+AGG | - | chr1.4:84752429-84752448 | None:intergenic | 25.0% |
| ! | ACACTAATTAGAGAAAAAGT+TGG | + | chr1.4:84753149-84753168 | MS.gene029387:intron | 25.0% |
| ! | ACATCTAGAAACCATAAAAT+GGG | + | chr1.4:84752489-84752508 | MS.gene029387:intron | 25.0% |
| ! | ATATGGTTCTTATCAAAAAC+TGG | - | chr1.4:84753493-84753512 | None:intergenic | 25.0% |
| ! | ATCATAGATCTATCATACAA+AGG | + | chr1.4:84752886-84752905 | MS.gene029387:intron | 25.0% |
| ! | CAATAGTAACATTAATGTTG+CGG | + | chr1.4:84750981-84751000 | MS.gene029387:CDS | 25.0% |
| ! | CACTAATTAGAGAAAAAGTT+GGG | + | chr1.4:84753150-84753169 | MS.gene029387:intron | 25.0% |
| ! | TACATCTAGAAACCATAAAA+TGG | + | chr1.4:84752488-84752507 | MS.gene029387:intron | 25.0% |
| ! | TATGGTTCTTATCAAAAACT+GGG | - | chr1.4:84753492-84753511 | None:intergenic | 25.0% |
| ! | TGCATTTGAATAGGATAAAA+AGG | - | chr1.4:84753263-84753282 | None:intergenic | 25.0% |
| !! | AAACTTGTCATTTATTTCAG+GGG | + | chr1.4:84751469-84751488 | MS.gene029387:intron | 25.0% |
| !! | AAATTTGAAATCTAGCAAAC+TGG | - | chr1.4:84752610-84752629 | None:intergenic | 25.0% |
| !! | CAAAACAAATTTTATCAGAG+AGG | + | chr1.4:84752821-84752840 | MS.gene029387:intron | 25.0% |
| !! | GATGTTGAATTTTTCTTTTC+AGG | + | chr1.4:84750846-84750865 | MS.gene029387:intron | 25.0% |
| !! | TTTTATTCTTTATGGTTGAG+TGG | - | chr1.4:84752988-84753007 | None:intergenic | 25.0% |
| !!! | ATTGCTTTTATAGTCACAAT+GGG | + | chr1.4:84752546-84752565 | MS.gene029387:intron | 25.0% |
| !!! | GCAATGGATTTTATTCTTTA+TGG | - | chr1.4:84752996-84753015 | None:intergenic | 25.0% |
| !!! | TAGATGTATTATTTGGCTTT+TGG | + | chr1.4:84753413-84753432 | MS.gene029387:intron | 25.0% |
| !!! | TATTGCTTTTATAGTCACAA+TGG | + | chr1.4:84752545-84752564 | MS.gene029387:intron | 25.0% |
| !!! | TCATTTTTTCAAATTACCTC+CGG | + | chr1.4:84750691-84750710 | MS.gene029387:intron | 25.0% |
| AAACAGGCACAATTAATATC+CGG | - | chr1.4:84751279-84751298 | None:intergenic | 30.0% | |
| AACCGAAAATTCGGAAAAAA+CGG | + | chr1.4:84753232-84753251 | MS.gene029387:intron | 30.0% | |
| AATGTCCTAAATGACTCTAA+TGG | - | chr1.4:84753183-84753202 | None:intergenic | 30.0% | |
| ACATCCAAGATCAAAAGATA+CGG | - | chr1.4:84752661-84752680 | None:intergenic | 30.0% | |
| ATTAGAAATAAGCACTAACC+TGG | - | chr1.4:84751377-84751396 | None:intergenic | 30.0% | |
| CAACCAAATGAGTATAATTC+AGG | + | chr1.4:84751199-84751218 | MS.gene029387:CDS | 30.0% | |
| CAATCACAATCAAAATAGGA+TGG | + | chr1.4:84752932-84752951 | MS.gene029387:intron | 30.0% | |
| CCTATCTCTATAAAGAATAC+AGG | - | chr1.4:84752175-84752194 | None:intergenic | 30.0% | |
| CCTGTATTCTTTATAGAGAT+AGG | + | chr1.4:84752172-84752191 | MS.gene029387:intron | 30.0% | |
| CTTCTGAACATTGAAAACTT+TGG | - | chr1.4:84752072-84752091 | None:intergenic | 30.0% | |
| GAGAATATTGTGATCATGAT+TGG | + | chr1.4:84753100-84753119 | MS.gene029387:intron | 30.0% | |
| TACTGGACATATCCAATAAA+CGG | + | chr1.4:84752690-84752709 | MS.gene029387:intron | 30.0% | |
| TCAATCGAACTATCCAAATA+AGG | - | chr1.4:84752209-84752228 | None:intergenic | 30.0% | |
| TGATCACAATATTCTCATCT+AGG | - | chr1.4:84753096-84753115 | None:intergenic | 30.0% | |
| TGCATCTTAATATACCACAT+AGG | + | chr1.4:84752245-84752264 | MS.gene029387:intron | 30.0% | |
| TGTCATCATCTATAAAGCAT+TGG | - | chr1.4:84750749-84750768 | None:intergenic | 30.0% | |
| TTGAGAAAAATGTACTCATG+TGG | - | chr1.4:84751829-84751848 | None:intergenic | 30.0% | |
| TTGGATGTTGAAATACTTAC+TGG | + | chr1.4:84752673-84752692 | MS.gene029387:intron | 30.0% | |
| TTTATAGAGATAGGTTTCAC+CGG | + | chr1.4:84752181-84752200 | MS.gene029387:intron | 30.0% | |
| ! | AACTTGTCATTTATTTCAGG+GGG | + | chr1.4:84751470-84751489 | MS.gene029387:intron | 30.0% |
| ! | ACATGAGTACATTTTTCTCA+AGG | + | chr1.4:84751828-84751847 | MS.gene029387:intron | 30.0% |
| ! | ATTGAAAACTTTGGTTCATC+AGG | - | chr1.4:84752063-84752082 | None:intergenic | 30.0% |
| ! | CAAAGTTTTCAATGTTCAGA+AGG | + | chr1.4:84752070-84752089 | MS.gene029387:intron | 30.0% |
| ! | CATGAGTACATTTTTCTCAA+GGG | + | chr1.4:84751829-84751848 | MS.gene029387:intron | 30.0% |
| ! | CTATTTCTTTACTATGGCTT+AGG | - | chr1.4:84752790-84752809 | None:intergenic | 30.0% |
| ! | GGTTTGTTTATTGTTGTTGT+TGG | + | chr1.4:84751220-84751239 | MS.gene029387:intron | 30.0% |
| ! | TATGGTGAATATTTGAGACA+GGG | - | chr1.4:84751958-84751977 | None:intergenic | 30.0% |
| ! | TGTTAGTTTGAGAGATTATC+TGG | + | chr1.4:84751406-84751425 | MS.gene029387:intron | 30.0% |
| ! | TTATGGTGAATATTTGAGAC+AGG | - | chr1.4:84751959-84751978 | None:intergenic | 30.0% |
| ! | TTTCTGCAGAGTTAATTTTC+TGG | + | chr1.4:84751932-84751951 | MS.gene029387:intron | 30.0% |
| ! | TTTTTCCACAACCGAAAATT+CGG | + | chr1.4:84753223-84753242 | MS.gene029387:intron | 30.0% |
| !! | TGATTTTAGAGAATGTCTGA+AGG | - | chr1.4:84753635-84753654 | None:intergenic | 30.0% |
| !! | TGGCTTATTTTCTAGCAATT+TGG | + | chr1.4:84751426-84751445 | MS.gene029387:intron | 30.0% |
| !! | TGTTACTTGAACGTTTTAAC+CGG | + | chr1.4:84751257-84751276 | MS.gene029387:intron | 30.0% |
| !! | TTGAAAATTTAGGTGATGGA+TGG | + | chr1.4:84750778-84750797 | MS.gene029387:intron | 30.0% |
| !! | TTTTGAAGGAAAAGGATTTG+CGG | - | chr1.4:84749681-84749700 | None:intergenic | 30.0% |
| !!! | AGCAATTTGGACCTTTTTTT+GGG | + | chr1.4:84751439-84751458 | MS.gene029387:intron | 30.0% |
| !!! | ATTTTTTTATCACACCTGCA+AGG | + | chr1.4:84751867-84751886 | MS.gene029387:intron | 30.0% |
| !!! | CATTTTTTCAAATTACCTCC+GGG | + | chr1.4:84750692-84750711 | MS.gene029387:intron | 30.0% |
| !!! | TAGCAATTTGGACCTTTTTT+TGG | + | chr1.4:84751438-84751457 | MS.gene029387:intron | 30.0% |
| !!! | TATTTGGCTTTTGGTTAATG+TGG | + | chr1.4:84753422-84753441 | MS.gene029387:intron | 30.0% |
| !!! | TGTTCTTATTTTTATTCCGC+AGG | + | chr1.4:84753522-84753541 | MS.gene029387:intron | 30.0% |
| AACAAATTGCAAGACTCTGT+TGG | + | chr1.4:84752460-84752479 | MS.gene029387:intron | 35.0% | |
| AACTACAAAATGAGCCTATG+TGG | - | chr1.4:84752262-84752281 | None:intergenic | 35.0% | |
| AACTCCAAACATACCCAAAT+TGG | - | chr1.4:84751325-84751344 | None:intergenic | 35.0% | |
| AACTTTCACGCTTTCCAATT+TGG | + | chr1.4:84751308-84751327 | MS.gene029387:CDS | 35.0% | |
| ACAAAGGAACATAGAGATAG+AGG | + | chr1.4:84752902-84752921 | MS.gene029387:intron | 35.0% | |
| ACTTTCACGCTTTCCAATTT+GGG | + | chr1.4:84751309-84751328 | MS.gene029387:CDS | 35.0% | |
| AGAGGAATAATGTATGATCC+AGG | - | chr1.4:84752112-84752131 | None:intergenic | 35.0% | |
| ATCTGAACCAGTATTTGACA+TGG | - | chr1.4:84753460-84753479 | None:intergenic | 35.0% | |
| ATTGGCACATACATAGACAT+CGG | - | chr1.4:84750731-84750750 | None:intergenic | 35.0% | |
| CAAAACACTAGAGAAAACTG+TGG | - | chr1.4:84752395-84752414 | None:intergenic | 35.0% | |
| CAAAAGTGGAAAGAACTAGT+TGG | + | chr1.4:84751154-84751173 | MS.gene029387:CDS | 35.0% | |
| CAGAGTGAAAAGTAAAATGC+TGG | + | chr1.4:84751551-84751570 | MS.gene029387:CDS | 35.0% | |
| CATCCAAGATCAAAAGATAC+GGG | - | chr1.4:84752660-84752679 | None:intergenic | 35.0% | |
| CATGATGCAAATGCAATCTA+AGG | - | chr1.4:84751725-84751744 | None:intergenic | 35.0% | |
| CTAGAGAAAACTGTGGTTAT+AGG | - | chr1.4:84752388-84752407 | None:intergenic | 35.0% | |
| CTTTCCAATTTGGGTATGTT+TGG | + | chr1.4:84751318-84751337 | MS.gene029387:CDS | 35.0% | |
| GAACTATCCAAATAAGGTTC+CGG | - | chr1.4:84752203-84752222 | None:intergenic | 35.0% | |
| GAGAGGTGAACATTTAATAC+AGG | + | chr1.4:84752838-84752857 | MS.gene029387:intron | 35.0% | |
| GTGAAACTGTGCATTTGAAT+AGG | - | chr1.4:84753272-84753291 | None:intergenic | 35.0% | |
| GTTTAACACCTCCCAAAAAA+AGG | - | chr1.4:84751453-84751472 | None:intergenic | 35.0% | |
| GTTTCAGCAAGTAAACCAAT+TGG | - | chr1.4:84749925-84749944 | None:intergenic | 35.0% | |
| TACCCTTATATTTCAGAGTG+AGG | - | chr1.4:84753340-84753359 | None:intergenic | 35.0% | |
| TATTATATGCATGGACGCAT+AGG | + | chr1.4:84752361-84752380 | MS.gene029387:intron | 35.0% | |
| TCCGCAGGATCAAATTAATT+GGG | + | chr1.4:84753537-84753556 | MS.gene029387:intron | 35.0% | |
| TCTTGATGCTTTCTATGAGA+AGG | + | chr1.4:84750443-84750462 | MS.gene029387:CDS | 35.0% | |
| TGAATCTGATAAGGCTGATA+TGG | + | chr1.4:84749825-84749844 | MS.gene029387:CDS | 35.0% | |
| TGCTGTTGCTAAGAATATGA+TGG | + | chr1.4:84750368-84750387 | MS.gene029387:CDS | 35.0% | |
| TGTATCTGTTGTCTCAAAAG+TGG | + | chr1.4:84751140-84751159 | MS.gene029387:CDS | 35.0% | |
| TGTGTATGCAACTGAATGTT+TGG | + | chr1.4:84753038-84753057 | MS.gene029387:intron | 35.0% | |
| TGTTCGTTTATGTTCTCACT+CGG | - | chr1.4:84751644-84751663 | None:intergenic | 35.0% | |
| TTCCGCAGGATCAAATTAAT+TGG | + | chr1.4:84753536-84753555 | MS.gene029387:intron | 35.0% | |
| TTGACATTGCATCAGTCAAT+GGG | + | chr1.4:84750163-84750182 | MS.gene029387:CDS | 35.0% | |
| TTTAGAGAATGTCTGAAGGA+AGG | - | chr1.4:84753631-84753650 | None:intergenic | 35.0% | |
| TTTGAAGGAAAAGGATTTGC+GGG | - | chr1.4:84749680-84749699 | None:intergenic | 35.0% | |
| ! | ACCCAATTAATTTGATCCTG+CGG | - | chr1.4:84753541-84753560 | None:intergenic | 35.0% |
| ! | ATAGTTCGATTGATTCCTAG+TGG | + | chr1.4:84752216-84752235 | MS.gene029387:intron | 35.0% |
| ! | CGTTGTTGTTGAATCTGATA+AGG | + | chr1.4:84749816-84749835 | MS.gene029387:CDS | 35.0% |
| ! | TATTGTTGTTGTTGGCTATC+TGG | + | chr1.4:84751228-84751247 | MS.gene029387:intron | 35.0% |
| ! | TTGCAGACATTCCCATTTTA+TGG | - | chr1.4:84752503-84752522 | None:intergenic | 35.0% |
| ! | TTTTTCCGAATTTTCGGTTG+TGG | - | chr1.4:84753231-84753250 | None:intergenic | 35.0% |
| !! | AAATTTAGGTGATGGATGGA+TGG | + | chr1.4:84750782-84750801 | MS.gene029387:intron | 35.0% |
| !! | AGCTTGGATTTTGAAGGAAA+AGG | - | chr1.4:84749689-84749708 | None:intergenic | 35.0% |
| !! | ATGCCTCACTCTGAAATATA+AGG | + | chr1.4:84753334-84753353 | MS.gene029387:intron | 35.0% |
| !! | GATCTTAGCTTGGATTTTGA+AGG | - | chr1.4:84749695-84749714 | None:intergenic | 35.0% |
| !! | TGCCTCACTCTGAAATATAA+GGG | + | chr1.4:84753335-84753354 | MS.gene029387:intron | 35.0% |
| !! | TTAGGTTGAAATTGTCTCAC+AGG | - | chr1.4:84752772-84752791 | None:intergenic | 35.0% |
| !!! | AATTTGGACCTTTTTTTGGG+AGG | + | chr1.4:84751442-84751461 | MS.gene029387:intron | 35.0% |
| !!! | CACCGTTTTTTCCGAATTTT+CGG | - | chr1.4:84753237-84753256 | None:intergenic | 35.0% |
| !!! | TCTTTTCAGGTGAAACCTAA+GGG | + | chr1.4:84750859-84750878 | MS.gene029387:intron | 35.0% |
| !!! | TTCTTTTCAGGTGAAACCTA+AGG | + | chr1.4:84750858-84750877 | MS.gene029387:intron | 35.0% |
| AAAGCAACATTACTCGAACC+CGG | - | chr1.4:84750333-84750352 | None:intergenic | 40.0% | |
| AAAGTTCTTGCCATCTTTGC+AGG | - | chr1.4:84750956-84750975 | None:intergenic | 40.0% | |
| AAATTGCAAGACTCTGTTGG+AGG | + | chr1.4:84752463-84752482 | MS.gene029387:intron | 40.0% | |
| AACAACGACACTATCACCTT+TGG | - | chr1.4:84749803-84749822 | None:intergenic | 40.0% | |
| AAGGAACATAGAGATAGAGG+AGG | + | chr1.4:84752905-84752924 | MS.gene029387:intron | 40.0% | |
| ACTGTTCTTGCTGATACAGA+TGG | + | chr1.4:84751522-84751541 | MS.gene029387:CDS | 40.0% | |
| AGAGGAAGAAGAAGAAGAAG+CGG | - | chr1.4:84749995-84750014 | None:intergenic | 40.0% | |
| AGATTTCACGGATCTTAGCT+TGG | - | chr1.4:84749705-84749724 | None:intergenic | 40.0% | |
| AGCCTCCATTAGAGTCATTT+AGG | + | chr1.4:84753175-84753194 | MS.gene029387:intron | 40.0% | |
| AGTTCTTCAGGATGCTGATA+AGG | + | chr1.4:84751038-84751057 | MS.gene029387:CDS | 40.0% | |
| ATCTGTATCAGCAAGAACAG+TGG | - | chr1.4:84751523-84751542 | None:intergenic | 40.0% | |
| CGAAAATTCGGAAAAAACGG+TGG | + | chr1.4:84753235-84753254 | MS.gene029387:intron | 40.0% | |
| GACGTTGAAACTTTCTACGA+CGG | + | chr1.4:84749847-84749866 | MS.gene029387:CDS | 40.0% | |
| GCATGAATGCATAAACAGCA+AGG | - | chr1.4:84751597-84751616 | None:intergenic | 40.0% | |
| GCTGTTACATTCACCTGAAA+AGG | - | chr1.4:84753573-84753592 | None:intergenic | 40.0% | |
| GTATGCAACTGAATGTTTGG+TGG | + | chr1.4:84753041-84753060 | MS.gene029387:intron | 40.0% | |
| GTCCTAAATGACTCTAATGG+AGG | - | chr1.4:84753180-84753199 | None:intergenic | 40.0% | |
| GTGGAAAGAACTAGTTGGAA+AGG | + | chr1.4:84751159-84751178 | MS.gene029387:CDS | 40.0% | |
| GTTCATCAGGTAAGAAGAGA+AGG | - | chr1.4:84752050-84752069 | None:intergenic | 40.0% | |
| GTTCGTTTATGTTCTCACTC+GGG | - | chr1.4:84751643-84751662 | None:intergenic | 40.0% | |
| GTTGACATTGCATCAGTCAA+TGG | + | chr1.4:84750162-84750181 | MS.gene029387:CDS | 40.0% | |
| TAAGGTTCTACCTCATACGA+TGG | - | chr1.4:84751707-84751726 | None:intergenic | 40.0% | |
| TCCAATCGTTTACTGTGTCA+AGG | - | chr1.4:84752308-84752327 | None:intergenic | 40.0% | |
| TCCTGAACATTACTGAAGCA+CGG | - | chr1.4:84751895-84751914 | None:intergenic | 40.0% | |
| TCCTTGACACAGTAAACGAT+TGG | + | chr1.4:84752304-84752323 | MS.gene029387:intron | 40.0% | |
| TCTGTATCAGCAAGAACAGT+GGG | - | chr1.4:84751522-84751541 | None:intergenic | 40.0% | |
| TGATAACTGGATACCCAACA+CGG | - | chr1.4:84750416-84750435 | None:intergenic | 40.0% | |
| TGTGCTACGATACCGTTTAT+TGG | - | chr1.4:84752705-84752724 | None:intergenic | 40.0% | |
| TTATCAGCATCCTGAAGAAC+TGG | - | chr1.4:84751039-84751058 | None:intergenic | 40.0% | |
| TTCGTTTATGTTCTCACTCG+GGG | - | chr1.4:84751642-84751661 | None:intergenic | 40.0% | |
| TTGAAGGAAAAGGATTTGCG+GGG | - | chr1.4:84749679-84749698 | None:intergenic | 40.0% | |
| TTGGTTACACGAGGCAAAAT+AGG | + | chr1.4:84753119-84753138 | MS.gene029387:intron | 40.0% | |
| TTTATTTCAGGGGGCTATCA+TGG | + | chr1.4:84751479-84751498 | MS.gene029387:intron | 40.0% | |
| ! | AGAAGAAGAAGCGGATTTGA+CGG | - | chr1.4:84749986-84750005 | None:intergenic | 40.0% |
| ! | CTTCTAATTTGAGGCGTGTT+TGG | + | chr1.4:84750631-84750650 | MS.gene029387:intron | 40.0% |
| ! | CTTGATAACTCCAGTTCTTC+AGG | + | chr1.4:84751026-84751045 | MS.gene029387:CDS | 40.0% |
| ! | GGGTCTAAACTTTCCTTTTC+AGG | + | chr1.4:84753557-84753576 | MS.gene029387:intron | 40.0% |
| ! | GTTTGTTGCTGTGTTGTAGT+TGG | + | chr1.4:84751114-84751133 | MS.gene029387:intron | 40.0% |
| ! | TGATCATGATTGGTTACACG+AGG | + | chr1.4:84753110-84753129 | MS.gene029387:intron | 40.0% |
| ! | TGTCCCGTATCTTTTGATCT+TGG | + | chr1.4:84752654-84752673 | MS.gene029387:intron | 40.0% |
| ! | TGTGATTTTCTTGGGACCAT+CGG | - | chr1.4:84750103-84750122 | None:intergenic | 40.0% |
| !! | AGAAGCACCATGTCAAATAC+TGG | + | chr1.4:84753450-84753469 | MS.gene029387:intron | 40.0% |
| !! | GCCTCAAATTAGAAGTGTCA+GGG | - | chr1.4:84750626-84750645 | None:intergenic | 40.0% |
| !! | TCAAGAGCATCAGTGATAAC+TGG | - | chr1.4:84750429-84750448 | None:intergenic | 40.0% |
| !! | TGTGACGATGACTGCTATTT+TGG | + | chr1.4:84750882-84750901 | MS.gene029387:CDS | 40.0% |
| AAATAAGCACTAACCTGGCC+TGG | - | chr1.4:84751372-84751391 | None:intergenic | 45.0% | |
| ATTGCATCAGTCAATGGGAC+TGG | + | chr1.4:84750168-84750187 | MS.gene029387:CDS | 45.0% | |
| CAGAAGGCTTCTTTCGTAAC+TGG | + | chr1.4:84752086-84752105 | MS.gene029387:intron | 45.0% | |
| CATTAATGTTGCGGTTGCTG+TGG | + | chr1.4:84750990-84751009 | MS.gene029387:CDS | 45.0% | |
| CTGTTCCTACTTTCCGTGTT+GGG | + | chr1.4:84750400-84750419 | MS.gene029387:CDS | 45.0% | |
| GAAGCTTGCAAAGCAGCATA+AGG | + | chr1.4:84750140-84750159 | MS.gene029387:CDS | 45.0% | |
| GCAGTAGAAGAACCACCTTT+AGG | - | chr1.4:84750294-84750313 | None:intergenic | 45.0% | |
| GCCCTGACACTTCTAATTTG+AGG | + | chr1.4:84750622-84750641 | MS.gene029387:intron | 45.0% | |
| GGAGCTACATTACTCATCAC+CGG | - | chr1.4:84750246-84750265 | None:intergenic | 45.0% | |
| GGTGATGAGTAATGTAGCTC+CGG | + | chr1.4:84750245-84750264 | MS.gene029387:CDS | 45.0% | |
| GGTTTCACCGGAACCTTATT+TGG | + | chr1.4:84752193-84752212 | MS.gene029387:intron | 45.0% | |
| GTCTCTTGGATCAAATCCGA+AGG | + | chr1.4:84749766-84749785 | MS.gene029387:CDS | 45.0% | |
| GTGCAGGCATGAAGATTTCA+CGG | - | chr1.4:84749717-84749736 | None:intergenic | 45.0% | |
| GTTAATGCCACCTGCAAAGA+TGG | + | chr1.4:84750943-84750962 | MS.gene029387:CDS | 45.0% | |
| TAAGATGCACCTTAGCCACT+AGG | - | chr1.4:84752234-84752253 | None:intergenic | 45.0% | |
| TCCGTTTGGTAGGATTACTC+CGG | + | chr1.4:84750191-84750210 | MS.gene029387:CDS | 45.0% | |
| TCTGTTCCTACTTTCCGTGT+TGG | + | chr1.4:84750399-84750418 | MS.gene029387:CDS | 45.0% | |
| TTGCAGGTGGCATTAACAAC+TGG | - | chr1.4:84750940-84750959 | None:intergenic | 45.0% | |
| TTTGATGCCATACTTCCACC+AGG | + | chr1.4:84751351-84751370 | MS.gene029387:CDS | 45.0% | |
| TTTGCAAGCTTCTTCGCTTG+AGG | - | chr1.4:84750132-84750151 | None:intergenic | 45.0% | |
| ! | AAACCAATTGGAGCACCAAC+CGG | - | chr1.4:84749913-84749932 | None:intergenic | 45.0% |
| ! | CCAAGAGACGATTTTACCCT+CGG | - | chr1.4:84749755-84749774 | None:intergenic | 45.0% |
| ! | CGATTGATTCCTAGTGGCTA+AGG | + | chr1.4:84752222-84752241 | MS.gene029387:intron | 45.0% |
| ! | GATTTTACCCTCGGTCATAG+TGG | - | chr1.4:84749746-84749765 | None:intergenic | 45.0% |
| !! | CGCCTCAAATTAGAAGTGTC+AGG | - | chr1.4:84750627-84750646 | None:intergenic | 45.0% |
| !! | GGATTTGACGGATTTAGCCT+GGG | - | chr1.4:84749974-84749993 | None:intergenic | 45.0% |
| !!! | AGGTGTCGCTGTGATTTTCT+TGG | - | chr1.4:84750112-84750131 | None:intergenic | 45.0% |
| !!! | GATGACTGCTATTTTGGCGA+AGG | + | chr1.4:84750888-84750907 | MS.gene029387:CDS | 45.0% |
| !!! | GGTGTCGCTGTGATTTTCTT+GGG | - | chr1.4:84750111-84750130 | None:intergenic | 45.0% |
| AAGGAAAAGGATTTGCGGGG+AGG | - | chr1.4:84749676-84749695 | None:intergenic | 50.0% | |
| AATTGTGCCTGTTTGCCTGC+AGG | + | chr1.4:84751285-84751304 | MS.gene029387:intron | 50.0% | |
| ACTCAGTTCCACTATGACCG+AGG | + | chr1.4:84749735-84749754 | MS.gene029387:CDS | 50.0% | |
| AGAAGAACCACCTTTAGGCG+CGG | - | chr1.4:84750289-84750308 | None:intergenic | 50.0% | |
| AGGAAAAGGATTTGCGGGGA+GGG | - | chr1.4:84749675-84749694 | None:intergenic | 50.0% | |
| AGGAGGAGAGTGGTGAATTG+AGG | - | chr1.4:84749637-84749656 | None:intergenic | 50.0% | |
| CCGAGGGTAAAATCGTCTCT+TGG | + | chr1.4:84749752-84749771 | MS.gene029387:CDS | 50.0% | |
| CTCAGTTCCACTATGACCGA+GGG | + | chr1.4:84749736-84749755 | MS.gene029387:CDS | 50.0% | |
| GAAAGTTCCTGCAGGCAAAC+AGG | - | chr1.4:84751295-84751314 | None:intergenic | 50.0% | |
| GAGGAGAGTGGTGAATTGAG+GGG | - | chr1.4:84749635-84749654 | None:intergenic | 50.0% | |
| GATGAGTAATGTAGCTCCGG+TGG | + | chr1.4:84750248-84750267 | MS.gene029387:CDS | 50.0% | |
| GCCGGAGTAATCCTACCAAA+CGG | - | chr1.4:84750195-84750214 | None:intergenic | 50.0% | |
| GCCGTGCTTCAGTAATGTTC+AGG | + | chr1.4:84751891-84751910 | MS.gene029387:intron | 50.0% | |
| GCGGTTAAGTCTGTTTCCGA+TGG | + | chr1.4:84750084-84750103 | MS.gene029387:CDS | 50.0% | |
| GGAGACTGAGAAGTTTCCTG+AGG | - | chr1.4:84750039-84750058 | None:intergenic | 50.0% | |
| GGAGGAGAGTGGTGAATTGA+GGG | - | chr1.4:84749636-84749655 | None:intergenic | 50.0% | |
| GGATACCCAACACGGAAAGT+AGG | - | chr1.4:84750408-84750427 | None:intergenic | 50.0% | |
| GGCCTTCTATCATAACCCTG+CGG | + | chr1.4:84751681-84751700 | MS.gene029387:intron | 50.0% | |
| GTTCTTGCCATCTTTGCAGG+TGG | - | chr1.4:84750953-84750972 | None:intergenic | 50.0% | |
| GTTTGGTAGGATTACTCCGG+CGG | + | chr1.4:84750194-84750213 | MS.gene029387:CDS | 50.0% | |
| TTTGGCGAAGGCTGTAGCTA+TGG | + | chr1.4:84750900-84750919 | MS.gene029387:CDS | 50.0% | |
| ! | AGTGAGGCATCATGCATGTG+AGG | - | chr1.4:84753324-84753343 | None:intergenic | 50.0% |
| ! | GAAAGCGTGAAAGTTCCTGC+AGG | - | chr1.4:84751303-84751322 | None:intergenic | 50.0% |
| ! | GTCATAGTGGAACTGAGTGC+AGG | - | chr1.4:84749733-84749752 | None:intergenic | 50.0% |
| !! | CGGATTTGACGGATTTAGCC+TGG | - | chr1.4:84749975-84749994 | None:intergenic | 50.0% |
| !! | TTTGGAGAGAGTGTCGCCTT+CGG | - | chr1.4:84749785-84749804 | None:intergenic | 50.0% |
| AACCTGGCCTGGTGGAAGTA+TGG | - | chr1.4:84751361-84751380 | None:intergenic | 55.0% | |
| ATCGGACACACGTCAACACC+CGG | - | chr1.4:84750713-84750732 | None:intergenic | 55.0% | |
| GAAACAGACTTAACCGCCGC+CGG | - | chr1.4:84750081-84750100 | None:intergenic | 55.0% | |
| GAAGGCGACACTCTCTCCAA+AGG | + | chr1.4:84749784-84749803 | MS.gene029387:CDS | 55.0% | |
| GAAGTTTCCTGAGGAGTCGC+CGG | - | chr1.4:84750030-84750049 | None:intergenic | 55.0% | |
| GCAGTCATCGTCACACCCTT+AGG | - | chr1.4:84750877-84750896 | None:intergenic | 55.0% | |
| GCCTTCGTCGACAACGATAG+CGG | - | chr1.4:84749881-84749900 | None:intergenic | 55.0% | |
| GCGGTTGCTGTGGCAATCAA+CGG | + | chr1.4:84751000-84751019 | MS.gene029387:CDS | 55.0% | |
| GGAAAAGGATTTGCGGGGAG+GGG | - | chr1.4:84749674-84749693 | None:intergenic | 55.0% | |
| GGCCGCAGGGTTATGATAGA+AGG | - | chr1.4:84751686-84751705 | None:intergenic | 55.0% | |
| GGCTTCTTTCGTAACTGGCC+TGG | + | chr1.4:84752091-84752110 | MS.gene029387:intron | 55.0% | |
| GTTGCTGTGGCAATCAACGG+TGG | + | chr1.4:84751003-84751022 | MS.gene029387:CDS | 55.0% | |
| TAAGCACTAACCTGGCCTGG+TGG | - | chr1.4:84751369-84751388 | None:intergenic | 55.0% | |
| TACCTCATACGATGGCCGCA+GGG | - | chr1.4:84751699-84751718 | None:intergenic | 55.0% | |
| TAGGATTACTCCGGCGGATG+TGG | + | chr1.4:84750200-84750219 | MS.gene029387:CDS | 55.0% | |
| TATCGCTGAAGCTCAAGCCC+AGG | + | chr1.4:84749954-84749973 | MS.gene029387:CDS | 55.0% | |
| TTCCTCTTCCTCTCCTCCTC+CGG | + | chr1.4:84750008-84750027 | MS.gene029387:CDS | 55.0% | |
| !! | ATGGGACTGGTCCGTTTGGT+AGG | + | chr1.4:84750181-84750200 | MS.gene029387:CDS | 55.0% |
| !! | GTCAATGGGACTGGTCCGTT+TGG | + | chr1.4:84750177-84750196 | MS.gene029387:CDS | 55.0% |
| AAAGGATTTGCGGGGAGGGG+AGG | - | chr1.4:84749671-84749690 | None:intergenic | 60.0% | |
| AACCCTGCGGCCATCGTATG+AGG | + | chr1.4:84751694-84751713 | MS.gene029387:intron | 60.0% | |
| ACTGAAGCACGGCACCTTGC+AGG | - | chr1.4:84751884-84751903 | None:intergenic | 60.0% | |
| AGAACCACCTTTAGGCGCGG+TGG | - | chr1.4:84750286-84750305 | None:intergenic | 60.0% | |
| CAGGGGGCTATCATGGCTGT+TGG | + | chr1.4:84751486-84751505 | MS.gene029387:intron | 60.0% | |
| CGACGAAGGCGAAACAGCTC+CGG | + | chr1.4:84749891-84749910 | MS.gene029387:CDS | 60.0% | |
| CTACCTCATACGATGGCCGC+AGG | - | chr1.4:84751700-84751719 | None:intergenic | 60.0% | |
| GAACCACCTTTAGGCGCGGT+GGG | - | chr1.4:84750285-84750304 | None:intergenic | 60.0% | |
| GAAGGCGAAACAGCTCCGGT+TGG | + | chr1.4:84749895-84749914 | MS.gene029387:CDS | 60.0% | |
| GATTACTCCGGCGGATGTGG+AGG | + | chr1.4:84750203-84750222 | MS.gene029387:CDS | 60.0% | |
| GCCGCTATCGTTGTCGACGA+AGG | + | chr1.4:84749877-84749896 | MS.gene029387:CDS | 60.0% | |
| GGCTGCTGCTGGGATTACAC+CGG | + | chr1.4:84750224-84750243 | MS.gene029387:CDS | 60.0% | |
| TGCCATACTTCCACCAGGCC+AGG | + | chr1.4:84751356-84751375 | MS.gene029387:CDS | 60.0% | |
| TGCTGCACCAGCTGCGATTC+CGG | + | chr1.4:84750311-84750330 | MS.gene029387:CDS | 60.0% | |
| ! | GCTCCGGTTGGTGCTCCAAT+TGG | + | chr1.4:84749907-84749926 | MS.gene029387:CDS | 60.0% |
| ACAGACTTAACCGCCGCCGG+TGG | - | chr1.4:84750078-84750097 | None:intergenic | 65.0% | |
| ATTTGCGGGGAGGGGAGGAG+CGG | - | chr1.4:84749666-84749685 | None:intergenic | 65.0% | |
| CGGATGTGGAGGCTGCTGCT+GGG | + | chr1.4:84750214-84750233 | MS.gene029387:CDS | 65.0% | |
| CTCGAACCCGGAATCGCAGC+TGG | - | chr1.4:84750321-84750340 | None:intergenic | 65.0% | |
| GCTGCACCAGCTGCGATTCC+GGG | + | chr1.4:84750312-84750331 | MS.gene029387:CDS | 65.0% | |
| GGACACACGTCAACACCCGG+AGG | - | chr1.4:84750710-84750729 | None:intergenic | 65.0% | |
| GTTTCCTGAGGAGTCGCCGG+AGG | - | chr1.4:84750027-84750046 | None:intergenic | 65.0% | |
| AGGAGTCGCCGGAGGAGGAG+AGG | - | chr1.4:84750019-84750038 | None:intergenic | 70.0% | |
| CCTGCTCCCACCGCGCCTAA+AGG | + | chr1.4:84750276-84750295 | MS.gene029387:CDS | 70.0% | |
| CCTTTAGGCGCGGTGGGAGC+AGG | - | chr1.4:84750279-84750298 | None:intergenic | 70.0% | |
| CGCCGGAGGAGGAGAGGAAG+AGG | - | chr1.4:84750013-84750032 | None:intergenic | 70.0% | |
| GACTTAACCGCCGCCGGTGG+AGG | - | chr1.4:84750075-84750094 | None:intergenic | 70.0% | |
| GCAGCAGCCTCCACATCCGC+CGG | - | chr1.4:84750213-84750232 | None:intergenic | 70.0% | |
| GCGGATGTGGAGGCTGCTGC+TGG | + | chr1.4:84750213-84750232 | MS.gene029387:CDS | 70.0% | |
| GCGGTGAGGGAGGAGGAGAG+TGG | - | chr1.4:84749647-84749666 | None:intergenic | 70.0% | |
| GCTCCCACCGCGCCTAAAGG+TGG | + | chr1.4:84750279-84750298 | MS.gene029387:CDS | 70.0% | |
| GTGGGAGCAGGAGTCGCCAC+CGG | - | chr1.4:84750267-84750286 | None:intergenic | 70.0% | |
| TCCTCCACCACCGCCTCCAC+CGG | + | chr1.4:84750059-84750078 | MS.gene029387:CDS | 70.0% | |
| TCCTCCTCCGGCGACTCCTC+AGG | + | chr1.4:84750020-84750039 | MS.gene029387:CDS | 70.0% | |
| TCCTGAGGAGTCGCCGGAGG+AGG | - | chr1.4:84750024-84750043 | None:intergenic | 70.0% | |
| TTAACCGCCGCCGGTGGAGG+CGG | - | chr1.4:84750072-84750091 | None:intergenic | 70.0% | |
| GAGGGGAGGAGCGGTGAGGG+AGG | - | chr1.4:84749657-84749676 | None:intergenic | 75.0% | |
| GGGAGGAGCGGTGAGGGAGG+AGG | - | chr1.4:84749654-84749673 | None:intergenic | 75.0% | |
| GGGGAGGGGAGGAGCGGTGA+GGG | - | chr1.4:84749660-84749679 | None:intergenic | 75.0% | |
| TCCACCACCGCCTCCACCGG+CGG | + | chr1.4:84750062-84750081 | MS.gene029387:CDS | 75.0% | |
| !! | GGTGGAGGCGGTGGTGGAGG+AGG | - | chr1.4:84750060-84750079 | None:intergenic | 75.0% |
| ! | ACCACCGCCTCCACCGGCGG+CGG | + | chr1.4:84750065-84750084 | MS.gene029387:CDS | 80.0% |
| ! | CGGGGAGGGGAGGAGCGGTG+AGG | - | chr1.4:84749661-84749680 | None:intergenic | 80.0% |
| !! | GCCGGTGGAGGCGGTGGTGG+AGG | - | chr1.4:84750063-84750082 | None:intergenic | 80.0% |
| ! | ACCGCCGCCGGTGGAGGCGG+TGG | - | chr1.4:84750069-84750088 | None:intergenic | 85.0% |
| ! | GCCGCCGGTGGAGGCGGTGG+TGG | - | chr1.4:84750066-84750085 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 84749607 | 84753683 | 84749607 | ID=MS.gene029387 |
| chr1.4 | mRNA | 84749607 | 84753683 | 84749607 | ID=MS.gene029387.t1;Parent=MS.gene029387 |
| chr1.4 | exon | 84749607 | 84750464 | 84749607 | ID=MS.gene029387.t1.exon1;Parent=MS.gene029387.t1 |
| chr1.4 | CDS | 84749607 | 84750464 | 84749607 | ID=cds.MS.gene029387.t1;Parent=MS.gene029387.t1 |
| chr1.4 | exon | 84750868 | 84751059 | 84750868 | ID=MS.gene029387.t1.exon2;Parent=MS.gene029387.t1 |
| chr1.4 | CDS | 84750868 | 84751059 | 84750868 | ID=cds.MS.gene029387.t1;Parent=MS.gene029387.t1 |
| chr1.4 | exon | 84751133 | 84751220 | 84751133 | ID=MS.gene029387.t1.exon3;Parent=MS.gene029387.t1 |
| chr1.4 | CDS | 84751133 | 84751220 | 84751133 | ID=cds.MS.gene029387.t1;Parent=MS.gene029387.t1 |
| chr1.4 | exon | 84751307 | 84751377 | 84751307 | ID=MS.gene029387.t1.exon4;Parent=MS.gene029387.t1 |
| chr1.4 | CDS | 84751307 | 84751377 | 84751307 | ID=cds.MS.gene029387.t1;Parent=MS.gene029387.t1 |
| chr1.4 | exon | 84751489 | 84751572 | 84751489 | ID=MS.gene029387.t1.exon5;Parent=MS.gene029387.t1 |
| chr1.4 | CDS | 84751489 | 84751572 | 84751489 | ID=cds.MS.gene029387.t1;Parent=MS.gene029387.t1 |
| chr1.4 | exon | 84753579 | 84753683 | 84753579 | ID=MS.gene029387.t1.exon6;Parent=MS.gene029387.t1 |
| chr1.4 | CDS | 84753579 | 84753683 | 84753579 | ID=cds.MS.gene029387.t1;Parent=MS.gene029387.t1 |
| Gene Sequence |
| Protein sequence |
