Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02999.t1 | XP_003591588.1 | 98.6 | 495 | 7 | 0 | 1 | 495 | 1 | 495 | 1.30E-291 | 1011.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02999.t1 | Q40153 | 67.4 | 475 | 153 | 1 | 13 | 487 | 1 | 473 | 3.5e-192 | 672.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02999.t1 | G7I2T4 | 98.6 | 495 | 7 | 0 | 1 | 495 | 1 | 495 | 9.5e-292 | 1011.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene02999 | MS.gene003186 | PPI |
| MS.gene006974 | MS.gene02999 | PPI |
| MS.gene02843 | MS.gene02999 | PPI |
| MS.gene048313 | MS.gene02999 | PPI |
| MS.gene02999 | MS.gene02160 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02999.t1 | MTR_1g089290 | 98.586 | 495 | 7 | 0 | 1 | 495 | 1 | 495 | 0.0 | 1018 |
| MS.gene02999.t1 | MTR_2g020720 | 69.954 | 436 | 127 | 2 | 49 | 484 | 32 | 463 | 0.0 | 644 |
| MS.gene02999.t1 | MTR_2g020720 | 71.588 | 359 | 98 | 2 | 49 | 407 | 32 | 386 | 0.0 | 536 |
| MS.gene02999.t1 | MTR_7g086360 | 23.297 | 279 | 143 | 7 | 224 | 465 | 96 | 340 | 2.19e-16 | 80.9 |
| MS.gene02999.t1 | MTR_4g119620 | 26.800 | 250 | 164 | 6 | 224 | 464 | 76 | 315 | 1.34e-15 | 78.2 |
| MS.gene02999.t1 | MTR_1g072140 | 25.311 | 241 | 137 | 5 | 224 | 464 | 109 | 306 | 3.01e-15 | 77.0 |
| MS.gene02999.t1 | MTR_6g004040 | 30.667 | 150 | 93 | 3 | 224 | 373 | 57 | 195 | 1.18e-12 | 70.9 |
| MS.gene02999.t1 | MTR_5g022690 | 31.933 | 119 | 77 | 1 | 224 | 342 | 361 | 475 | 5.50e-11 | 65.1 |
| MS.gene02999.t1 | MTR_8g038550 | 23.554 | 242 | 135 | 7 | 229 | 468 | 228 | 421 | 7.68e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02999.t1 | AT4G03020 | 71.753 | 485 | 132 | 3 | 10 | 491 | 10 | 492 | 0.0 | 724 |
| MS.gene02999.t1 | AT4G03020 | 71.753 | 485 | 132 | 3 | 10 | 491 | 10 | 492 | 0.0 | 724 |
| MS.gene02999.t1 | AT4G03020 | 71.753 | 485 | 132 | 3 | 10 | 491 | 10 | 492 | 0.0 | 724 |
| MS.gene02999.t1 | AT2G43770 | 23.843 | 281 | 139 | 6 | 224 | 465 | 94 | 338 | 4.44e-18 | 85.9 |
| MS.gene02999.t1 | AT3G49660 | 24.542 | 273 | 181 | 7 | 208 | 468 | 53 | 312 | 4.08e-15 | 76.6 |
| MS.gene02999.t1 | AT4G02730 | 26.141 | 241 | 125 | 7 | 224 | 459 | 126 | 318 | 7.63e-12 | 67.0 |
| MS.gene02999.t1 | AT1G11160 | 24.696 | 247 | 138 | 6 | 224 | 469 | 56 | 255 | 1.40e-11 | 67.8 |
| MS.gene02999.t1 | AT1G11160 | 24.696 | 247 | 138 | 7 | 224 | 469 | 56 | 255 | 1.40e-11 | 67.8 |
| MS.gene02999.t1 | AT1G11160 | 24.696 | 247 | 138 | 6 | 224 | 469 | 14 | 213 | 1.49e-11 | 67.4 |
| MS.gene02999.t1 | AT1G11160 | 24.696 | 247 | 138 | 6 | 224 | 469 | 56 | 255 | 1.55e-11 | 67.4 |
| MS.gene02999.t1 | AT5G08390 | 29.333 | 150 | 95 | 3 | 224 | 373 | 57 | 195 | 2.22e-11 | 67.0 |
| MS.gene02999.t1 | AT1G61210 | 23.394 | 218 | 135 | 5 | 265 | 468 | 12 | 211 | 5.23e-11 | 65.9 |
| MS.gene02999.t1 | AT1G61210 | 23.394 | 218 | 135 | 5 | 265 | 468 | 12 | 211 | 8.06e-11 | 65.5 |
| MS.gene02999.t1 | AT1G61210 | 23.394 | 218 | 135 | 5 | 265 | 468 | 12 | 211 | 8.12e-11 | 65.5 |
| MS.gene02999.t1 | AT5G23430 | 28.105 | 153 | 93 | 4 | 224 | 373 | 57 | 195 | 9.24e-11 | 65.1 |
| MS.gene02999.t1 | AT5G23430 | 28.105 | 153 | 93 | 4 | 224 | 373 | 57 | 195 | 9.32e-11 | 65.1 |
| MS.gene02999.t1 | AT5G23430 | 28.105 | 153 | 93 | 4 | 224 | 373 | 57 | 195 | 9.32e-11 | 65.1 |
Find 106 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCTCTTACAGGTGATTTA+TGG | 0.181919 | 1.3:-62668466 | None:intergenic |
| CTATGCTCGTTAGCTCTTCT+TGG | 0.255220 | 1.3:+62668510 | MS.gene02999:CDS |
| AGCAGATATTTACCTGTAAA+TGG | 0.272385 | 1.3:+62665053 | MS.gene02999:CDS |
| ATATGATCTTGAAACAAATA+AGG | 0.306324 | 1.3:+62665844 | MS.gene02999:CDS |
| TAGCACTGGAAAATCTAAAA+AGG | 0.311940 | 1.3:+62664842 | MS.gene02999:CDS |
| GACGATGGAGGATACTCTTT+TGG | 0.318718 | 1.3:+62665749 | MS.gene02999:CDS |
| CCTTCCCCGTCCTGAACAAT+TGG | 0.339582 | 1.3:-62665000 | None:intergenic |
| AGCATCTTCACCGGGGAAAC+AGG | 0.359807 | 1.3:-62664963 | None:intergenic |
| ACGTATGTCCCAAAGTTTGA+TGG | 0.361310 | 1.3:-62666754 | None:intergenic |
| TGCACTTTACGTTGACCAAA+TGG | 0.380038 | 1.3:+62664749 | MS.gene02999:CDS |
| TGCCAACTACAATCTCTTAC+AGG | 0.382540 | 1.3:-62668476 | None:intergenic |
| TTCCAGTGCTAGAATCTTCA+AGG | 0.382938 | 1.3:-62664830 | None:intergenic |
| ATAGTTATGTACGCTATATC+TGG | 0.384746 | 1.3:+62664726 | None:intergenic |
| CTTACTAGATGGCTTTGATC+AGG | 0.388290 | 1.3:-62665332 | None:intergenic |
| GGCCAGAAGTATATCTATAC+TGG | 0.393179 | 1.3:+62667799 | MS.gene02999:CDS |
| ATCCAGTATAGATATACTTC+TGG | 0.402582 | 1.3:-62667801 | None:intergenic |
| ATAGGCCAAGGACCATTTAC+AGG | 0.415805 | 1.3:-62665065 | None:intergenic |
| GGCCGCGAATCCAATTGTTC+AGG | 0.416503 | 1.3:+62664990 | MS.gene02999:CDS |
| CGTATGCTCGACTAGGCATT+TGG | 0.426545 | 1.3:-62665091 | None:intergenic |
| TACTCATAGCATAACCCATT+TGG | 0.431168 | 1.3:-62664764 | None:intergenic |
| AGATCAGACCATCAAACTTT+GGG | 0.433353 | 1.3:+62666746 | MS.gene02999:CDS |
| GGGATGGAGATGTTGTAAAA+TGG | 0.435817 | 1.3:+62668531 | MS.gene02999:CDS |
| AAGATCAGACCATCAAACTT+TGG | 0.439366 | 1.3:+62666745 | MS.gene02999:CDS |
| TATGCTCGTTAGCTCTTCTT+GGG | 0.443104 | 1.3:+62668511 | MS.gene02999:CDS |
| GATGGGAGGGAATTAGTTGC+AGG | 0.457956 | 1.3:+62665797 | MS.gene02999:CDS |
| AATTTCAGTAACCGTGTTCG+TGG | 0.462360 | 1.3:+62667453 | MS.gene02999:intron |
| ATGTGTTTATGTATATGATT+TGG | 0.470295 | 1.3:+62667834 | MS.gene02999:CDS |
| ATCGTACACATTGTAAATGT+TGG | 0.472091 | 1.3:+62665473 | MS.gene02999:CDS |
| ATTTACCTGTAAATGGTCCT+TGG | 0.479935 | 1.3:+62665060 | MS.gene02999:CDS |
| CGGCCTGCCAGCATCTTCAC+CGG | 0.481898 | 1.3:-62664972 | None:intergenic |
| GATTGTCCATCTCAAACTCT+TGG | 0.482576 | 1.3:-62665291 | None:intergenic |
| CAGTCAGTGGCTACGTATAG+AGG | 0.482615 | 1.3:+62667552 | MS.gene02999:CDS |
| GCACTTTACGTTGACCAAAT+GGG | 0.482739 | 1.3:+62664750 | MS.gene02999:CDS |
| CGAATCCAATTGTTCAGGAC+GGG | 0.482995 | 1.3:+62664995 | MS.gene02999:CDS |
| ATCCTTGAAGATTCTAGCAC+TGG | 0.486362 | 1.3:+62664828 | MS.gene02999:CDS |
| TCCCCGGTGAAGATGCTGGC+AGG | 0.486810 | 1.3:+62664969 | MS.gene02999:CDS |
| CTCGTTAGCTCTTCTTGGGA+TGG | 0.489305 | 1.3:+62668515 | MS.gene02999:CDS |
| TGAATGGGATTACAGGTGGA+TGG | 0.490487 | 1.3:+62667488 | MS.gene02999:CDS |
| GTCCTGAACAATTGGATTCG+CGG | 0.491213 | 1.3:-62664992 | None:intergenic |
| ACTGGCCATCTTATTTACTC+TGG | 0.494750 | 1.3:+62666262 | MS.gene02999:CDS |
| CTCTGATGTGGCAGCCTCGT+CGG | 0.495084 | 1.3:+62668568 | MS.gene02999:CDS |
| GAAAGAGTTGCCTGTTTCCC+CGG | 0.495375 | 1.3:+62664953 | MS.gene02999:CDS |
| TATACAATGTGGACAAAGGT+TGG | 0.499477 | 1.3:+62665246 | MS.gene02999:CDS |
| CTGCTAGTACATGATGGGTC+TGG | 0.500073 | 1.3:+62664927 | MS.gene02999:CDS |
| TTACTAGATGGCTTTGATCA+GGG | 0.501289 | 1.3:-62665331 | None:intergenic |
| GGACGCTATTTCATTTCAAA+CGG | 0.501559 | 1.3:+62666720 | MS.gene02999:CDS |
| CATCAACTGCTAGTACATGA+TGG | 0.505267 | 1.3:+62664921 | MS.gene02999:CDS |
| CAAGAAGAGCTAACGAGCAT+AGG | 0.505730 | 1.3:-62668509 | None:intergenic |
| CACCTGTAAGAGATTGTAGT+TGG | 0.509483 | 1.3:+62668474 | MS.gene02999:CDS |
| TGTCCCATCAAAACCCCTGC+CGG | 0.512728 | 1.3:-62666660 | None:intergenic |
| GTAACCGTGTTCGTGGATAT+AGG | 0.517492 | 1.3:+62667460 | MS.gene02999:intron |
| CCAATTGTTCAGGACGGGGA+AGG | 0.517976 | 1.3:+62665000 | MS.gene02999:CDS |
| TGTTTCCCCGGTGAAGATGC+TGG | 0.519063 | 1.3:+62664965 | MS.gene02999:CDS |
| AATGCTAAAGACAAGCCGGC+AGG | 0.520946 | 1.3:+62666645 | MS.gene02999:CDS |
| TTTATTGATACCCGTGGAGA+TGG | 0.521044 | 1.3:+62666699 | MS.gene02999:CDS |
| TTTAGTGGTCACCTAAAAGC+TGG | 0.522377 | 1.3:-62667615 | None:intergenic |
| CAATAAATGTAATGCCCTCA+AGG | 0.532155 | 1.3:-62666683 | None:intergenic |
| AAGAGCATACCTGGTAACAT+TGG | 0.534358 | 1.3:-62666787 | None:intergenic |
| GTTGTAAAATGGCAATCTGC+TGG | 0.535124 | 1.3:+62668542 | MS.gene02999:CDS |
| TGCTAAAGACAAGCCGGCAG+GGG | 0.535291 | 1.3:+62666647 | MS.gene02999:CDS |
| GACTCTAGTGATACTGAAGA+TGG | 0.540581 | 1.3:+62664798 | MS.gene02999:CDS |
| CAAGAGTGCGTAAGACTGAA+TGG | 0.543044 | 1.3:-62667575 | None:intergenic |
| GATGATTCATTACAGGTGAG+TGG | 0.544157 | 1.3:+62668419 | MS.gene02999:intron |
| CGACTAGGCATTTGGTCGAT+AGG | 0.547791 | 1.3:-62665083 | None:intergenic |
| TACTAGATGGCTTTGATCAG+GGG | 0.548826 | 1.3:-62665330 | None:intergenic |
| GCAGGAGATCCACGATGGGT+TGG | 0.550911 | 1.3:+62665712 | MS.gene02999:intron |
| ATCTGCTGGGAGCTCTGATG+TGG | 0.552704 | 1.3:+62668556 | MS.gene02999:CDS |
| GGCCTGCCAGCATCTTCACC+GGG | 0.553632 | 1.3:-62664971 | None:intergenic |
| AAGAAGAGCTAACGAGCATA+GGG | 0.554781 | 1.3:-62668508 | None:intergenic |
| ATGCTAAAGACAAGCCGGCA+GGG | 0.560101 | 1.3:+62666646 | MS.gene02999:CDS |
| CACTTCCAGAGTAAATAAGA+TGG | 0.565103 | 1.3:-62666267 | None:intergenic |
| CTTAAATGCTAAAGACAAGC+CGG | 0.577168 | 1.3:+62666641 | MS.gene02999:CDS |
| ACATTTACAATGTGTACGAT+AGG | 0.581114 | 1.3:-62665470 | None:intergenic |
| ATCAACTGCTAGTACATGAT+GGG | 0.581257 | 1.3:+62664922 | MS.gene02999:CDS |
| TTGTAAAATGGCAATCTGCT+GGG | 0.586915 | 1.3:+62668543 | MS.gene02999:CDS |
| TTCTAACCAAGAGTTTGAGA+TGG | 0.588266 | 1.3:+62665285 | MS.gene02999:CDS |
| GAAATAGCGTCCATCTCCAC+GGG | 0.592069 | 1.3:-62666709 | None:intergenic |
| TGAAATAGCGTCCATCTCCA+CGG | 0.592795 | 1.3:-62666710 | None:intergenic |
| ATGAGGTGTTGATTTCAACT+TGG | 0.593854 | 1.3:-62664901 | None:intergenic |
| AAATGTCATCCAATGTTACC+AGG | 0.595793 | 1.3:+62666778 | MS.gene02999:CDS |
| AAAATATACAATGTGGACAA+AGG | 0.599948 | 1.3:+62665242 | MS.gene02999:CDS |
| AGCCTCGTCGGTTAAGAAGA+GGG | 0.600390 | 1.3:+62668580 | MS.gene02999:CDS |
| CAGCCTCGTCGGTTAAGAAG+AGG | 0.601348 | 1.3:+62668579 | MS.gene02999:CDS |
| GAATTAGTTGCAGGAACTAG+TGG | 0.606878 | 1.3:+62665806 | MS.gene02999:CDS |
| CTAACGAGCATAGGGTGGAA+AGG | 0.614104 | 1.3:-62668500 | None:intergenic |
| TAGTACATGATGGGTCTGGA+AGG | 0.615748 | 1.3:+62664931 | MS.gene02999:CDS |
| GCGAATCCAATTGTTCAGGA+CGG | 0.617169 | 1.3:+62664994 | MS.gene02999:CDS |
| TGAGACACGTATGCTCGACT+AGG | 0.624491 | 1.3:-62665098 | None:intergenic |
| AACTCCTATATCCACGAACA+CGG | 0.626589 | 1.3:-62667464 | None:intergenic |
| GGCATTTGGTCGATAGGCCA+AGG | 0.629750 | 1.3:-62665077 | None:intergenic |
| GAATCCAATTGTTCAGGACG+GGG | 0.630776 | 1.3:+62664996 | MS.gene02999:CDS |
| AGTTTCATCAGCAAAACATA+CGG | 0.631088 | 1.3:-62666242 | None:intergenic |
| GTGTACGATAGGTGACATGC+TGG | 0.632627 | 1.3:-62665459 | None:intergenic |
| TGCTATGAGTAGATTAGACG+TGG | 0.632706 | 1.3:+62664776 | MS.gene02999:CDS |
| AAGAGCTAACGAGCATAGGG+TGG | 0.635204 | 1.3:-62668505 | None:intergenic |
| TCATGTACTAGCAGTTGATG+AGG | 0.637096 | 1.3:-62664918 | None:intergenic |
| ATTACATTTATTGATACCCG+TGG | 0.637357 | 1.3:+62666693 | MS.gene02999:CDS |
| CAAAAGATGACAGCGATCAG+CGG | 0.644029 | 1.3:-62665030 | None:intergenic |
| AAGTGATGATAGTTTCTGCA+AGG | 0.652431 | 1.3:+62666285 | MS.gene02999:CDS |
| AATATGCAGGAGATCCACGA+TGG | 0.665955 | 1.3:+62665707 | MS.gene02999:intron |
| TCATCCTTGTGATCAGTCAG+TGG | 0.674274 | 1.3:+62667539 | MS.gene02999:CDS |
| GTAGCCACTGACTGATCACA+AGG | 0.680555 | 1.3:-62667543 | None:intergenic |
| ATATGCAGGAGATCCACGAT+GGG | 0.686383 | 1.3:+62665708 | MS.gene02999:intron |
| AGAGTCACTAGCAAATGTGA+CGG | 0.704087 | 1.3:+62665508 | MS.gene02999:CDS |
| TACCCTCTTCTTAACCGACG+AGG | 0.713771 | 1.3:-62668582 | None:intergenic |
| GCCTGCCAGCATCTTCACCG+GGG | 0.715871 | 1.3:-62664970 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAATTATAAAACTTG+AGG | - | chr1.3:62667975-62667994 | None:intergenic | 10.0% |
| !! | AAATAAATTATAAAACTTGA+GGG | - | chr1.3:62667974-62667993 | None:intergenic | 10.0% |
| !! | AAGAAAAATAATTGATTAAA+AGG | - | chr1.3:62665383-62665402 | None:intergenic | 10.0% |
| !!! | CTAAATTAATTTATTTTTCA+GGG | + | chr1.3:62665209-62665228 | MS.gene02999:intron | 10.0% |
| !!! | TCTAAATTAATTTATTTTTC+AGG | + | chr1.3:62665208-62665227 | MS.gene02999:intron | 10.0% |
| !! | AAATAGTATAATCTATAACT+AGG | + | chr1.3:62667916-62667935 | MS.gene02999:intron | 15.0% |
| !! | AATAAATTATAAAACTTGAG+GGG | - | chr1.3:62667973-62667992 | None:intergenic | 15.0% |
| !! | AATAGTATAATCTATAACTA+GGG | + | chr1.3:62667917-62667936 | MS.gene02999:intron | 15.0% |
| !! | CTAAATAGATGTAATATTTA+TGG | - | chr1.3:62665909-62665928 | None:intergenic | 15.0% |
| !! | TTGATAAATTATTCAATCAT+TGG | - | chr1.3:62668027-62668046 | None:intergenic | 15.0% |
| !!! | AAAAGATGAAATTTAAGATT+TGG | + | chr1.3:62668081-62668100 | MS.gene02999:intron | 15.0% |
| !!! | AGATTTTATGTTTTTATCAT+CGG | + | chr1.3:62667882-62667901 | MS.gene02999:intron | 15.0% |
| !!! | TGTAATGTATTATTTTTAAG+CGG | + | chr1.3:62668321-62668340 | MS.gene02999:intron | 15.0% |
| !! | AATTATGTTGTAAAATTGTG+AGG | + | chr1.3:62667147-62667166 | MS.gene02999:intron | 20.0% |
| !! | ACTGAAATTTAGAGAAAAAT+CGG | - | chr1.3:62667442-62667461 | None:intergenic | 20.0% |
| !! | ATAGTATAATCTATAACTAG+GGG | + | chr1.3:62667918-62667937 | MS.gene02999:intron | 20.0% |
| !! | ATATGATCTTGAAACAAATA+AGG | + | chr1.3:62665844-62665863 | MS.gene02999:CDS | 20.0% |
| !! | ATGTGTTTATGTATATGATT+TGG | + | chr1.3:62667834-62667853 | MS.gene02999:CDS | 20.0% |
| !! | CTTGAGCATATTAAAATTAT+TGG | + | chr1.3:62667719-62667738 | MS.gene02999:intron | 20.0% |
| !! | TAAATTATAGATTCAGACAA+TGG | - | chr1.3:62665948-62665967 | None:intergenic | 20.0% |
| !! | TCTAATGTACAAAATTGTTT+AGG | + | chr1.3:62666602-62666621 | MS.gene02999:intron | 20.0% |
| !! | TTCATATAATTCAACAGATA+TGG | - | chr1.3:62666828-62666847 | None:intergenic | 20.0% |
| !! | TTGTCTGAATCTATAATTTA+TGG | + | chr1.3:62665948-62665967 | MS.gene02999:intron | 20.0% |
| !!! | AAACTCTGTATTTTTCATTT+TGG | - | chr1.3:62667231-62667250 | None:intergenic | 20.0% |
| ! | AAAACTATAGATGCATACAT+AGG | - | chr1.3:62665185-62665204 | None:intergenic | 25.0% |
| ! | AAAATATACAATGTGGACAA+AGG | + | chr1.3:62665242-62665261 | MS.gene02999:CDS | 25.0% |
| ! | AAACTATAGATGCATACATA+GGG | - | chr1.3:62665184-62665203 | None:intergenic | 25.0% |
| ! | AATTTGAAGAAAACAACATC+AGG | - | chr1.3:62667770-62667789 | None:intergenic | 25.0% |
| ! | ACCAAAATTTAGAAAACCTA+TGG | - | chr1.3:62666192-62666211 | None:intergenic | 25.0% |
| ! | CAGAAAGTTTATATTGTAGT+TGG | + | chr1.3:62666535-62666554 | MS.gene02999:intron | 25.0% |
| ! | CCACATAAAAATATACAATG+TGG | + | chr1.3:62665235-62665254 | MS.gene02999:CDS | 25.0% |
| ! | GAAAATGAAGAATGATGAAA+AGG | - | chr1.3:62667650-62667669 | None:intergenic | 25.0% |
| ! | GAGATACTGCTTATAAAATT+TGG | - | chr1.3:62668290-62668309 | None:intergenic | 25.0% |
| ! | GTATACTTGTGAATTATCTA+TGG | + | chr1.3:62667174-62667193 | MS.gene02999:intron | 25.0% |
| ! | GTCCAAATATGAAAATCAAA+GGG | - | chr1.3:62667685-62667704 | None:intergenic | 25.0% |
| ! | TAAAATTTGGTTATGAACAG+CGG | - | chr1.3:62668277-62668296 | None:intergenic | 25.0% |
| ! | TAAACTAGACGACTTATATT+AGG | + | chr1.3:62667032-62667051 | MS.gene02999:intron | 25.0% |
| ! | TAGTATAATCTATAACTAGG+GGG | + | chr1.3:62667919-62667938 | MS.gene02999:intron | 25.0% |
| ! | TCCAAATATGAAAATCAAAG+GGG | - | chr1.3:62667684-62667703 | None:intergenic | 25.0% |
| ! | TCTATGTGAAATCAAAAGTT+GGG | - | chr1.3:62666380-62666399 | None:intergenic | 25.0% |
| ! | TGTCCAAATATGAAAATCAA+AGG | - | chr1.3:62667686-62667705 | None:intergenic | 25.0% |
| ! | TTCTATGTGAAATCAAAAGT+TGG | - | chr1.3:62666381-62666400 | None:intergenic | 25.0% |
| ! | TTTCAGTTCTTATAATATGC+AGG | + | chr1.3:62665694-62665713 | MS.gene02999:intron | 25.0% |
| !! | AAACTTTGATGATTCATTAC+AGG | + | chr1.3:62668412-62668431 | MS.gene02999:intron | 25.0% |
| !! | AAAGTATTTACACATACCAT+AGG | + | chr1.3:62666173-62666192 | MS.gene02999:intron | 25.0% |
| !! | AAATCATTTTCATATTGGGA+TGG | + | chr1.3:62666136-62666155 | MS.gene02999:intron | 25.0% |
| !! | AACTGTCATAGTTTTTCTTA+TGG | + | chr1.3:62665407-62665426 | MS.gene02999:intron | 25.0% |
| !! | ACCATAGGTTTTCTAAATTT+TGG | + | chr1.3:62666188-62666207 | MS.gene02999:intron | 25.0% |
| !! | ATATAGAATTAGCTTAGTCT+CGG | - | chr1.3:62667387-62667406 | None:intergenic | 25.0% |
| !! | ATGAAATTTAAGATTTGGAG+TGG | + | chr1.3:62668086-62668105 | MS.gene02999:intron | 25.0% |
| !! | CTAATATTTTCATGCAGAAA+TGG | - | chr1.3:62668051-62668070 | None:intergenic | 25.0% |
| !! | CTATTTAGCTTCATATGATT+TGG | + | chr1.3:62665921-62665940 | MS.gene02999:intron | 25.0% |
| !! | GGAGAAATCATTTTCATATT+GGG | + | chr1.3:62666132-62666151 | MS.gene02999:intron | 25.0% |
| !! | TGGAGAAATCATTTTCATAT+TGG | + | chr1.3:62666131-62666150 | MS.gene02999:intron | 25.0% |
| !!! | CAAGGCATTGTATTTTTATT+GGG | - | chr1.3:62668383-62668402 | None:intergenic | 25.0% |
| !!! | CCACATTGTATATTTTTATG+TGG | - | chr1.3:62665238-62665257 | None:intergenic | 25.0% |
| AATCTCTTACAGGTGATTTA+TGG | - | chr1.3:62668469-62668488 | None:intergenic | 30.0% | |
| ACATTTACAATGTGTACGAT+AGG | - | chr1.3:62665473-62665492 | None:intergenic | 30.0% | |
| ACTCTAAATTTCCATGAACA+AGG | - | chr1.3:62666973-62666992 | None:intergenic | 30.0% | |
| AGCAGATATTTACCTGTAAA+TGG | + | chr1.3:62665053-62665072 | MS.gene02999:CDS | 30.0% | |
| AGGTATGTTCTACAATAAGA+TGG | + | chr1.3:62666305-62666324 | MS.gene02999:intron | 30.0% | |
| AGTAAAATACACCTTGTTCA+TGG | + | chr1.3:62666959-62666978 | MS.gene02999:intron | 30.0% | |
| AGTTTCATCAGCAAAACATA+CGG | - | chr1.3:62666245-62666264 | None:intergenic | 30.0% | |
| ATCCAGTATAGATATACTTC+TGG | - | chr1.3:62667804-62667823 | None:intergenic | 30.0% | |
| ATCGTACACATTGTAAATGT+TGG | + | chr1.3:62665473-62665492 | MS.gene02999:CDS | 30.0% | |
| ATCTCATACTTATATCGTCA+AGG | + | chr1.3:62666430-62666449 | MS.gene02999:intron | 30.0% | |
| ATGAAAAGAACACCATCAAA+CGG | - | chr1.3:62665661-62665680 | None:intergenic | 30.0% | |
| ATTACATTTATTGATACCCG+TGG | + | chr1.3:62666693-62666712 | MS.gene02999:CDS | 30.0% | |
| CATTTGCATTCTTCAATTTC+AGG | + | chr1.3:62665430-62665449 | MS.gene02999:intron | 30.0% | |
| CCAAAGATCATAATTCAATG+TGG | - | chr1.3:62665537-62665556 | None:intergenic | 30.0% | |
| CCACATTGAATTATGATCTT+TGG | + | chr1.3:62665534-62665553 | MS.gene02999:intron | 30.0% | |
| CTAATGCATAATAGAGATAC+AGG | + | chr1.3:62667096-62667115 | MS.gene02999:intron | 30.0% | |
| GTACAAAATTGTTTAGGTCT+GGG | + | chr1.3:62666608-62666627 | MS.gene02999:intron | 30.0% | |
| TCAAAGTTTCTTATTGAGCA+AGG | - | chr1.3:62668401-62668420 | None:intergenic | 30.0% | |
| TCAGAGGAATAGATACAAAT+TGG | + | chr1.3:62665596-62665615 | MS.gene02999:intron | 30.0% | |
| TGAAGAATGATGAAAAGGTA+AGG | - | chr1.3:62667645-62667664 | None:intergenic | 30.0% | |
| TGGGAAAGATAAAATTCATG+TGG | + | chr1.3:62666904-62666923 | MS.gene02999:intron | 30.0% | |
| TGTACAAAATTGTTTAGGTC+TGG | + | chr1.3:62666607-62666626 | MS.gene02999:intron | 30.0% | |
| TTTCTTCAAATTTACAGCAC+TGG | + | chr1.3:62667778-62667797 | MS.gene02999:intron | 30.0% | |
| ! | AGTAATGAACACCTTTTACA+CGG | + | chr1.3:62666400-62666419 | MS.gene02999:intron | 30.0% |
| ! | CTGTGAAATTTTCAACAGAT+GGG | + | chr1.3:62665780-62665799 | MS.gene02999:CDS | 30.0% |
| ! | GATTTTTCATCAAATGACGA+TGG | + | chr1.3:62665734-62665753 | MS.gene02999:CDS | 30.0% |
| ! | TAGCACTGGAAAATCTAAAA+AGG | + | chr1.3:62664842-62664861 | MS.gene02999:CDS | 30.0% |
| ! | TCTGTGAAATTTTCAACAGA+TGG | + | chr1.3:62665779-62665798 | MS.gene02999:CDS | 30.0% |
| !! | AACTCTAGTTAACTTGTATC+TGG | + | chr1.3:62667007-62667026 | MS.gene02999:intron | 30.0% |
| !! | TAGTAGTTTGCTGATTGTTT+AGG | - | chr1.3:62668158-62668177 | None:intergenic | 30.0% |
| !! | TCCCCTTTGATTTTCATATT+TGG | + | chr1.3:62667680-62667699 | MS.gene02999:intron | 30.0% |
| !! | TTTAGGCATTTTGCTATGTT+CGG | - | chr1.3:62668141-62668160 | None:intergenic | 30.0% |
| !!! | GAGTATTAGAGTTTTGTTCA+TGG | + | chr1.3:62668223-62668242 | MS.gene02999:intron | 30.0% |
| !!! | GCAAGGCATTGTATTTTTAT+TGG | - | chr1.3:62668384-62668403 | None:intergenic | 30.0% |
| !!! | TGGATATAGGAGTTTTGAAT+GGG | + | chr1.3:62667473-62667492 | MS.gene02999:CDS | 30.0% |
| !!! | TTTTCTAAGATGTCTGTAAC+TGG | + | chr1.3:62665620-62665639 | MS.gene02999:intron | 30.0% |
| AAAGCCATCTAGTAAGTAAC+TGG | + | chr1.3:62665339-62665358 | MS.gene02999:intron | 35.0% | |
| AAATGTCATCCAATGTTACC+AGG | + | chr1.3:62666778-62666797 | MS.gene02999:CDS | 35.0% | |
| AAGATCAGACCATCAAACTT+TGG | + | chr1.3:62666745-62666764 | MS.gene02999:CDS | 35.0% | |
| AAGTGATGATAGTTTCTGCA+AGG | + | chr1.3:62666285-62666304 | MS.gene02999:CDS | 35.0% | |
| ACCTTATAGAAATGTGTGCT+CGG | - | chr1.3:62667127-62667146 | None:intergenic | 35.0% | |
| AGATCAGACCATCAAACTTT+GGG | + | chr1.3:62666746-62666765 | MS.gene02999:CDS | 35.0% | |
| ATCAACTGCTAGTACATGAT+GGG | + | chr1.3:62664922-62664941 | MS.gene02999:CDS | 35.0% | |
| ATTTACCTGTAAATGGTCCT+TGG | + | chr1.3:62665060-62665079 | MS.gene02999:CDS | 35.0% | |
| ATTTATGGTGCAGTTTGAAG+CGG | + | chr1.3:62665963-62665982 | MS.gene02999:intron | 35.0% | |
| CAAAAGTTGGGATACTCAAA+AGG | - | chr1.3:62666368-62666387 | None:intergenic | 35.0% | |
| CAACAGATATGGATACCAAA+AGG | - | chr1.3:62666817-62666836 | None:intergenic | 35.0% | |
| CAATAAATGTAATGCCCTCA+AGG | - | chr1.3:62666686-62666705 | None:intergenic | 35.0% | |
| CACTTCCAGAGTAAATAAGA+TGG | - | chr1.3:62666270-62666289 | None:intergenic | 35.0% | |
| CTTAAATGCTAAAGACAAGC+CGG | + | chr1.3:62666641-62666660 | MS.gene02999:CDS | 35.0% | |
| GACACTGTCAATAGATTAAG+TGG | - | chr1.3:62666047-62666066 | None:intergenic | 35.0% | |
| GTTTCCAGTTACTTACTAGA+TGG | - | chr1.3:62665346-62665365 | None:intergenic | 35.0% | |
| TAAAAGTGAGAATGCTTACC+TGG | - | chr1.3:62665160-62665179 | None:intergenic | 35.0% | |
| TACTCATAGCATAACCCATT+TGG | - | chr1.3:62664767-62664786 | None:intergenic | 35.0% | |
| TATACAATGTGGACAAAGGT+TGG | + | chr1.3:62665246-62665265 | MS.gene02999:CDS | 35.0% | |
| TATGATTGTTCGCAATGCAA+AGG | + | chr1.3:62667404-62667423 | MS.gene02999:intron | 35.0% | |
| TTCTAACCAAGAGTTTGAGA+TGG | + | chr1.3:62665285-62665304 | MS.gene02999:CDS | 35.0% | |
| TTGTAAAATGGCAATCTGCT+GGG | + | chr1.3:62668543-62668562 | MS.gene02999:CDS | 35.0% | |
| ! | AGTTTGCTTAGCTGCATAAT+AGG | + | chr1.3:62666014-62666033 | MS.gene02999:intron | 35.0% |
| ! | GAAATTTTCAACAGATGGGA+GGG | + | chr1.3:62665784-62665803 | MS.gene02999:CDS | 35.0% |
| ! | GGACGCTATTTCATTTCAAA+CGG | + | chr1.3:62666720-62666739 | MS.gene02999:CDS | 35.0% |
| ! | GTAATGAACACCTTTTACAC+GGG | + | chr1.3:62666401-62666420 | MS.gene02999:intron | 35.0% |
| ! | GTATGTTTTGCTGATGAAAC+TGG | + | chr1.3:62666244-62666263 | MS.gene02999:CDS | 35.0% |
| ! | TGAAATTTTCAACAGATGGG+AGG | + | chr1.3:62665783-62665802 | MS.gene02999:CDS | 35.0% |
| ! | TGATTCAAGTCTTTTGCTTG+TGG | - | chr1.3:62667522-62667541 | None:intergenic | 35.0% |
| ! | TTTTCATCAAATGACGATGG+AGG | + | chr1.3:62665737-62665756 | MS.gene02999:CDS | 35.0% |
| !! | ATGAGGTGTTGATTTCAACT+TGG | - | chr1.3:62664904-62664923 | None:intergenic | 35.0% |
| !! | GTTTTGAATGCTATGATCAG+AGG | + | chr1.3:62665580-62665599 | MS.gene02999:intron | 35.0% |
| !! | TTACTAGATGGCTTTGATCA+GGG | - | chr1.3:62665334-62665353 | None:intergenic | 35.0% |
| !! | TTGGTTTTCATTTTACGTGC+AGG | + | chr1.3:62666207-62666226 | MS.gene02999:intron | 35.0% |
| !!! | ATGGTTCACTTTTTGTTGCT+GGG | + | chr1.3:62665132-62665151 | MS.gene02999:CDS | 35.0% |
| !!! | GTGGATATAGGAGTTTTGAA+TGG | + | chr1.3:62667472-62667491 | MS.gene02999:CDS | 35.0% |
| AAAAGGTAAGGCCAGTTTAG+TGG | - | chr1.3:62667633-62667652 | None:intergenic | 40.0% | |
| AACCATAAGTCTGTGACTGA+TGG | + | chr1.3:62667058-62667077 | MS.gene02999:intron | 40.0% | |
| AACTCCTATATCCACGAACA+CGG | - | chr1.3:62667467-62667486 | None:intergenic | 40.0% | |
| AAGAAGAGCTAACGAGCATA+GGG | - | chr1.3:62668511-62668530 | None:intergenic | 40.0% | |
| AAGTTGGGATACTCAAAAGG+AGG | - | chr1.3:62666365-62666384 | None:intergenic | 40.0% | |
| AATCTATAACTAGGGGGAAG+AGG | + | chr1.3:62667925-62667944 | MS.gene02999:intron | 40.0% | |
| AATTTCAGTAACCGTGTTCG+TGG | + | chr1.3:62667453-62667472 | MS.gene02999:intron | 40.0% | |
| ACCATAAGTCTGTGACTGAT+GGG | + | chr1.3:62667059-62667078 | MS.gene02999:intron | 40.0% | |
| ACGTATGTCCCAAAGTTTGA+TGG | - | chr1.3:62666757-62666776 | None:intergenic | 40.0% | |
| AGAGTCACTAGCAAATGTGA+CGG | + | chr1.3:62665508-62665527 | MS.gene02999:CDS | 40.0% | |
| AGATTGAACTCCCGTGTAAA+AGG | - | chr1.3:62666414-62666433 | None:intergenic | 40.0% | |
| AGGAACAGACAACATTAGCT+AGG | - | chr1.3:62667362-62667381 | None:intergenic | 40.0% | |
| AGTTGGGATACTCAAAAGGA+GGG | - | chr1.3:62666364-62666383 | None:intergenic | 40.0% | |
| ATCCTTGAAGATTCTAGCAC+TGG | + | chr1.3:62664828-62664847 | MS.gene02999:CDS | 40.0% | |
| ATCTATAACTAGGGGGAAGA+GGG | + | chr1.3:62667926-62667945 | MS.gene02999:intron | 40.0% | |
| ATGAAAAATCCAACCCATCG+TGG | - | chr1.3:62665724-62665743 | None:intergenic | 40.0% | |
| ATGTACAAGGTTCCGTTTGA+TGG | + | chr1.3:62665646-62665665 | MS.gene02999:intron | 40.0% | |
| CACCTGTAAGAGATTGTAGT+TGG | + | chr1.3:62668474-62668493 | MS.gene02999:CDS | 40.0% | |
| CATCAACTGCTAGTACATGA+TGG | + | chr1.3:62664921-62664940 | MS.gene02999:CDS | 40.0% | |
| CTGTAACTGGTGTATGTACA+AGG | + | chr1.3:62665633-62665652 | MS.gene02999:intron | 40.0% | |
| GAATTAGTTGCAGGAACTAG+TGG | + | chr1.3:62665806-62665825 | MS.gene02999:CDS | 40.0% | |
| GACACAGAATCATCGTTGAT+TGG | - | chr1.3:62667299-62667318 | None:intergenic | 40.0% | |
| GACTCTAGTGATACTGAAGA+TGG | + | chr1.3:62664798-62664817 | MS.gene02999:CDS | 40.0% | |
| GATGATTCATTACAGGTGAG+TGG | + | chr1.3:62668419-62668438 | MS.gene02999:intron | 40.0% | |
| GATTGTCCATCTCAAACTCT+TGG | - | chr1.3:62665294-62665313 | None:intergenic | 40.0% | |
| GCACTTTACGTTGACCAAAT+GGG | + | chr1.3:62664750-62664769 | MS.gene02999:CDS | 40.0% | |
| GGGATGGAGATGTTGTAAAA+TGG | + | chr1.3:62668531-62668550 | MS.gene02999:CDS | 40.0% | |
| GTTGTAAAATGGCAATCTGC+TGG | + | chr1.3:62668542-62668561 | MS.gene02999:CDS | 40.0% | |
| TCCGAGCACACATTTCTATA+AGG | + | chr1.3:62667123-62667142 | MS.gene02999:intron | 40.0% | |
| TCTCCTTGAACTTTGATTCC+TGG | + | chr1.3:62668246-62668265 | MS.gene02999:intron | 40.0% | |
| TGCACTTTACGTTGACCAAA+TGG | + | chr1.3:62664749-62664768 | MS.gene02999:CDS | 40.0% | |
| TGCCAACTACAATCTCTTAC+AGG | - | chr1.3:62668479-62668498 | None:intergenic | 40.0% | |
| TGCTATGAGTAGATTAGACG+TGG | + | chr1.3:62664776-62664795 | MS.gene02999:CDS | 40.0% | |
| TTCCAGTGCTAGAATCTTCA+AGG | - | chr1.3:62664833-62664852 | None:intergenic | 40.0% | |
| TTTAGTGGTCACCTAAAAGC+TGG | - | chr1.3:62667618-62667637 | None:intergenic | 40.0% | |
| TTTATTGATACCCGTGGAGA+TGG | + | chr1.3:62666699-62666718 | MS.gene02999:CDS | 40.0% | |
| ! | AAAGGCTAAAAGAGCATACC+TGG | - | chr1.3:62666799-62666818 | None:intergenic | 40.0% |
| ! | AAGAGCATACCTGGTAACAT+TGG | - | chr1.3:62666790-62666809 | None:intergenic | 40.0% |
| ! | ACTGGCCATCTTATTTACTC+TGG | + | chr1.3:62666262-62666281 | MS.gene02999:CDS | 40.0% |
| ! | CATATTGGGATGGCTCTATA+TGG | + | chr1.3:62666146-62666165 | MS.gene02999:intron | 40.0% |
| ! | GAATTAGCTTAGTCTCGGAT+AGG | - | chr1.3:62667382-62667401 | None:intergenic | 40.0% |
| ! | GGCCAGAAGTATATCTATAC+TGG | + | chr1.3:62667799-62667818 | MS.gene02999:CDS | 40.0% |
| ! | TATGCTCGTTAGCTCTTCTT+GGG | + | chr1.3:62668511-62668530 | MS.gene02999:CDS | 40.0% |
| ! | TCATGTACTAGCAGTTGATG+AGG | - | chr1.3:62664921-62664940 | None:intergenic | 40.0% |
| ! | TTCAAGTCTTTTGCTTGTGG+CGG | - | chr1.3:62667519-62667538 | None:intergenic | 40.0% |
| ! | TTTATGGTGCAGTTTGAAGC+GGG | + | chr1.3:62665964-62665983 | MS.gene02999:intron | 40.0% |
| !! | CTTACTAGATGGCTTTGATC+AGG | - | chr1.3:62665335-62665354 | None:intergenic | 40.0% |
| !! | CTTTTAGGTGACCACTAAAC+TGG | + | chr1.3:62667619-62667638 | MS.gene02999:intron | 40.0% |
| !! | GCTTTTTCTCTCCAGCTTTT+AGG | + | chr1.3:62667604-62667623 | MS.gene02999:CDS | 40.0% |
| !! | GGTATGCTCTTTTAGCCTTT+TGG | + | chr1.3:62666799-62666818 | MS.gene02999:intron | 40.0% |
| !! | GTTGTTTTGTTCTTTCCCTC+TGG | + | chr1.3:62666559-62666578 | MS.gene02999:intron | 40.0% |
| !! | GTTTTGAATGGGATTACAGG+TGG | + | chr1.3:62667484-62667503 | MS.gene02999:CDS | 40.0% |
| !! | TACTAGATGGCTTTGATCAG+GGG | - | chr1.3:62665333-62665352 | None:intergenic | 40.0% |
| !!! | GATGGTTCACTTTTTGTTGC+TGG | + | chr1.3:62665131-62665150 | MS.gene02999:CDS | 40.0% |
| !!! | GGAGTTTTGAATGGGATTAC+AGG | + | chr1.3:62667481-62667500 | MS.gene02999:CDS | 40.0% |
| AAGCTGGAGAGAAAAAGCAG+CGG | - | chr1.3:62667602-62667621 | None:intergenic | 45.0% | |
| AATATGCAGGAGATCCACGA+TGG | + | chr1.3:62665707-62665726 | MS.gene02999:intron | 45.0% | |
| ACCCATCAGTCACAGACTTA+TGG | - | chr1.3:62667063-62667082 | None:intergenic | 45.0% | |
| AGGCCAGGAATCAAAGTTCA+AGG | - | chr1.3:62668252-62668271 | None:intergenic | 45.0% | |
| ATAGGCCAAGGACCATTTAC+AGG | - | chr1.3:62665068-62665087 | None:intergenic | 45.0% | |
| ATATGCAGGAGATCCACGAT+GGG | + | chr1.3:62665708-62665727 | MS.gene02999:intron | 45.0% | |
| CAAAAGATGACAGCGATCAG+CGG | - | chr1.3:62665033-62665052 | None:intergenic | 45.0% | |
| CAAGAAGAGCTAACGAGCAT+AGG | - | chr1.3:62668512-62668531 | None:intergenic | 45.0% | |
| CGAATCCAATTGTTCAGGAC+GGG | + | chr1.3:62664995-62665014 | MS.gene02999:CDS | 45.0% | |
| GAATCCAATTGTTCAGGACG+GGG | + | chr1.3:62664996-62665015 | MS.gene02999:CDS | 45.0% | |
| GCGAATCCAATTGTTCAGGA+CGG | + | chr1.3:62664994-62665013 | MS.gene02999:CDS | 45.0% | |
| GTAACCGTGTTCGTGGATAT+AGG | + | chr1.3:62667460-62667479 | MS.gene02999:intron | 45.0% | |
| GTCCTGAACAATTGGATTCG+CGG | - | chr1.3:62664995-62665014 | None:intergenic | 45.0% | |
| TCATCCTTGTGATCAGTCAG+TGG | + | chr1.3:62667539-62667558 | MS.gene02999:CDS | 45.0% | |
| TGAAATAGCGTCCATCTCCA+CGG | - | chr1.3:62666713-62666732 | None:intergenic | 45.0% | |
| TGAATGGGATTACAGGTGGA+TGG | + | chr1.3:62667488-62667507 | MS.gene02999:CDS | 45.0% | |
| TTTGTGTCAGCTTGTCTGTC+TGG | + | chr1.3:62667321-62667340 | MS.gene02999:intron | 45.0% | |
| ! | AAGTCTGTGACTGATGGGTA+TGG | + | chr1.3:62667064-62667083 | MS.gene02999:intron | 45.0% |
| ! | ACTTTTTGTTGCTGGGTTCC+AGG | + | chr1.3:62665139-62665158 | MS.gene02999:CDS | 45.0% |
| ! | CAAGAGTGCGTAAGACTGAA+TGG | - | chr1.3:62667578-62667597 | None:intergenic | 45.0% |
| ! | CTATGCTCGTTAGCTCTTCT+TGG | + | chr1.3:62668510-62668529 | MS.gene02999:CDS | 45.0% |
| ! | GACGATGGAGGATACTCTTT+TGG | + | chr1.3:62665749-62665768 | MS.gene02999:CDS | 45.0% |
| ! | GTGTCTCAGTTTTCAGCTGA+TGG | + | chr1.3:62665113-62665132 | MS.gene02999:CDS | 45.0% |
| ! | TCAAGTCTTTTGCTTGTGGC+GGG | - | chr1.3:62667518-62667537 | None:intergenic | 45.0% |
| !! | GCTTCGAATTTTAGCGCACA+CGG | + | chr1.3:62665871-62665890 | MS.gene02999:CDS | 45.0% |
| !! | GTTTTGATGGGACACCTTGA+GGG | + | chr1.3:62666669-62666688 | MS.gene02999:CDS | 45.0% |
| !! | TAGTACATGATGGGTCTGGA+AGG | + | chr1.3:62664931-62664950 | MS.gene02999:CDS | 45.0% |
| !!! | TAATTTATTTATCATTTTTA+TGG | + | chr1.3:62666111-62666130 | MS.gene02999:intron | 5.0% |
| AAGAGCTAACGAGCATAGGG+TGG | - | chr1.3:62668508-62668527 | None:intergenic | 50.0% | |
| AATGCTAAAGACAAGCCGGC+AGG | + | chr1.3:62666645-62666664 | MS.gene02999:CDS | 50.0% | |
| ATGCTAAAGACAAGCCGGCA+GGG | + | chr1.3:62666646-62666665 | MS.gene02999:CDS | 50.0% | |
| CAGTCAGTGGCTACGTATAG+AGG | + | chr1.3:62667552-62667571 | MS.gene02999:CDS | 50.0% | |
| CGACTAGGCATTTGGTCGAT+AGG | - | chr1.3:62665086-62665105 | None:intergenic | 50.0% | |
| CGTATGCTCGACTAGGCATT+TGG | - | chr1.3:62665094-62665113 | None:intergenic | 50.0% | |
| CTAACGAGCATAGGGTGGAA+AGG | - | chr1.3:62668503-62668522 | None:intergenic | 50.0% | |
| GAAAGAGTTGCCTGTTTCCC+CGG | + | chr1.3:62664953-62664972 | MS.gene02999:CDS | 50.0% | |
| GAAATAGCGTCCATCTCCAC+GGG | - | chr1.3:62666712-62666731 | None:intergenic | 50.0% | |
| GATGGGAGGGAATTAGTTGC+AGG | + | chr1.3:62665797-62665816 | MS.gene02999:CDS | 50.0% | |
| GTGTACGATAGGTGACATGC+TGG | - | chr1.3:62665462-62665481 | None:intergenic | 50.0% | |
| GTTCTTTCCCTCTGGACTTC+AGG | + | chr1.3:62666567-62666586 | MS.gene02999:intron | 50.0% | |
| TACCCTCTTCTTAACCGACG+AGG | - | chr1.3:62668585-62668604 | None:intergenic | 50.0% | |
| TATAACTAGGGGGAAGAGGG+AGG | + | chr1.3:62667929-62667948 | MS.gene02999:intron | 50.0% | |
| TCCCTAACCTGAAGTCCAGA+GGG | - | chr1.3:62666577-62666596 | None:intergenic | 50.0% | |
| TGAGACACGTATGCTCGACT+AGG | - | chr1.3:62665101-62665120 | None:intergenic | 50.0% | |
| TTTGGTTATGAACAGCGGCG+AGG | - | chr1.3:62668272-62668291 | None:intergenic | 50.0% | |
| ! | AGCCTCGTCGGTTAAGAAGA+GGG | + | chr1.3:62668580-62668599 | MS.gene02999:CDS | 50.0% |
| ! | CTCGTTAGCTCTTCTTGGGA+TGG | + | chr1.3:62668515-62668534 | MS.gene02999:CDS | 50.0% |
| ! | GCTAGAGCACTTCTGCTGAT+GGG | + | chr1.3:62666885-62666904 | MS.gene02999:intron | 50.0% |
| ! | GTAGCCACTGACTGATCACA+AGG | - | chr1.3:62667546-62667565 | None:intergenic | 50.0% |
| ! | TCCCTCTGGACTTCAGGTTA+GGG | + | chr1.3:62666573-62666592 | MS.gene02999:intron | 50.0% |
| ! | TGCTAGAGCACTTCTGCTGA+TGG | + | chr1.3:62666884-62666903 | MS.gene02999:intron | 50.0% |
| ! | TTCCCTCTGGACTTCAGGTT+AGG | + | chr1.3:62666572-62666591 | MS.gene02999:intron | 50.0% |
| !! | CTGCTAGTACATGATGGGTC+TGG | + | chr1.3:62664927-62664946 | MS.gene02999:CDS | 50.0% |
| !! | GGTTTTGATGGGACACCTTG+AGG | + | chr1.3:62666668-62666687 | MS.gene02999:CDS | 50.0% |
| AGCATCTTCACCGGGGAAAC+AGG | - | chr1.3:62664966-62664985 | None:intergenic | 55.0% | |
| CCAATTGTTCAGGACGGGGA+AGG | + | chr1.3:62665000-62665019 | MS.gene02999:CDS | 55.0% | |
| CCTTCCCCGTCCTGAACAAT+TGG | - | chr1.3:62665003-62665022 | None:intergenic | 55.0% | |
| GGCATTTGGTCGATAGGCCA+AGG | - | chr1.3:62665080-62665099 | None:intergenic | 55.0% | |
| GGCCGCGAATCCAATTGTTC+AGG | + | chr1.3:62664990-62665009 | MS.gene02999:CDS | 55.0% | |
| GTCCCTAACCTGAAGTCCAG+AGG | - | chr1.3:62666578-62666597 | None:intergenic | 55.0% | |
| TGCTAAAGACAAGCCGGCAG+GGG | + | chr1.3:62666647-62666666 | MS.gene02999:CDS | 55.0% | |
| TGTCCCATCAAAACCCCTGC+CGG | - | chr1.3:62666663-62666682 | None:intergenic | 55.0% | |
| TGTTTCCCCGGTGAAGATGC+TGG | + | chr1.3:62664965-62664984 | MS.gene02999:CDS | 55.0% | |
| ! | ATCTGCTGGGAGCTCTGATG+TGG | + | chr1.3:62668556-62668575 | MS.gene02999:CDS | 55.0% |
| ! | ATGGTGCAGTTTGAAGCGGG+TGG | + | chr1.3:62665967-62665986 | MS.gene02999:intron | 55.0% |
| ! | CAGCCTCGTCGGTTAAGAAG+AGG | + | chr1.3:62668579-62668598 | MS.gene02999:CDS | 55.0% |
| !! | AAGCCGGCAGGGGTTTTGAT+GGG | + | chr1.3:62666657-62666676 | MS.gene02999:CDS | 55.0% |
| CTAGGGGGAAGAGGGAGGAT+AGG | + | chr1.3:62667934-62667953 | MS.gene02999:intron | 60.0% | |
| CTCTGATGTGGCAGCCTCGT+CGG | + | chr1.3:62668568-62668587 | MS.gene02999:CDS | 60.0% | |
| GCAGGAGATCCACGATGGGT+TGG | + | chr1.3:62665712-62665731 | MS.gene02999:intron | 60.0% | |
| TTATGAACAGCGGCGAGGCC+AGG | - | chr1.3:62668267-62668286 | None:intergenic | 60.0% | |
| !! | CAAGCCGGCAGGGGTTTTGA+TGG | + | chr1.3:62666656-62666675 | MS.gene02999:CDS | 60.0% |
| CGGCCTGCCAGCATCTTCAC+CGG | - | chr1.3:62664975-62664994 | None:intergenic | 65.0% | |
| GCCTGCCAGCATCTTCACCG+GGG | - | chr1.3:62664973-62664992 | None:intergenic | 65.0% | |
| GGCCTGCCAGCATCTTCACC+GGG | - | chr1.3:62664974-62664993 | None:intergenic | 65.0% | |
| TCCCCGGTGAAGATGCTGGC+AGG | + | chr1.3:62664969-62664988 | MS.gene02999:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 62664732 | 62668637 | 62664732 | ID=MS.gene02999 |
| chr1.3 | mRNA | 62664732 | 62668637 | 62664732 | ID=MS.gene02999.t1;Parent=MS.gene02999 |
| chr1.3 | exon | 62664732 | 62665160 | 62664732 | ID=MS.gene02999.t1.exon1;Parent=MS.gene02999.t1 |
| chr1.3 | CDS | 62664732 | 62665160 | 62664732 | ID=cds.MS.gene02999.t1;Parent=MS.gene02999.t1 |
| chr1.3 | exon | 62665230 | 62665349 | 62665230 | ID=MS.gene02999.t1.exon2;Parent=MS.gene02999.t1 |
| chr1.3 | CDS | 62665230 | 62665349 | 62665230 | ID=cds.MS.gene02999.t1;Parent=MS.gene02999.t1 |
| chr1.3 | exon | 62665452 | 62665529 | 62665452 | ID=MS.gene02999.t1.exon3;Parent=MS.gene02999.t1 |
| chr1.3 | CDS | 62665452 | 62665529 | 62665452 | ID=cds.MS.gene02999.t1;Parent=MS.gene02999.t1 |
| chr1.3 | exon | 62665716 | 62665892 | 62665716 | ID=MS.gene02999.t1.exon4;Parent=MS.gene02999.t1 |
| chr1.3 | CDS | 62665716 | 62665892 | 62665716 | ID=cds.MS.gene02999.t1;Parent=MS.gene02999.t1 |
| chr1.3 | exon | 62666229 | 62666306 | 62666229 | ID=MS.gene02999.t1.exon5;Parent=MS.gene02999.t1 |
| chr1.3 | CDS | 62666229 | 62666306 | 62666229 | ID=cds.MS.gene02999.t1;Parent=MS.gene02999.t1 |
| chr1.3 | exon | 62666624 | 62666799 | 62666624 | ID=MS.gene02999.t1.exon6;Parent=MS.gene02999.t1 |
| chr1.3 | CDS | 62666624 | 62666799 | 62666624 | ID=cds.MS.gene02999.t1;Parent=MS.gene02999.t1 |
| chr1.3 | exon | 62667461 | 62667625 | 62667461 | ID=MS.gene02999.t1.exon7;Parent=MS.gene02999.t1 |
| chr1.3 | CDS | 62667461 | 62667625 | 62667461 | ID=cds.MS.gene02999.t1;Parent=MS.gene02999.t1 |
| chr1.3 | exon | 62667795 | 62667855 | 62667795 | ID=MS.gene02999.t1.exon8;Parent=MS.gene02999.t1 |
| chr1.3 | CDS | 62667795 | 62667855 | 62667795 | ID=cds.MS.gene02999.t1;Parent=MS.gene02999.t1 |
| chr1.3 | exon | 62668434 | 62668637 | 62668434 | ID=MS.gene02999.t1.exon9;Parent=MS.gene02999.t1 |
| chr1.3 | CDS | 62668434 | 62668637 | 62668434 | ID=cds.MS.gene02999.t1;Parent=MS.gene02999.t1 |
| Gene Sequence |
| Protein sequence |
