Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030132.t1 | XP_013458343.1 | 97 | 642 | 19 | 0 | 1 | 642 | 1 | 642 | 0.00E+00 | 1263.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030132.t1 | Q9ASW1 | 58.1 | 575 | 222 | 5 | 72 | 642 | 60 | 619 | 3.8e-191 | 669.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030132.t1 | A0A072URG8 | 97.0 | 642 | 19 | 0 | 1 | 642 | 1 | 642 | 0.0e+00 | 1263.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene035805 | MS.gene030132 | PPI |
| MS.gene030132 | MS.gene73119 | PPI |
| MS.gene030132 | MS.gene064542 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030132.t1 | MTR_4g123090 | 97.040 | 642 | 19 | 0 | 1 | 642 | 1 | 642 | 0.0 | 1300 |
| MS.gene030132.t1 | MTR_5g041210 | 49.614 | 647 | 307 | 8 | 1 | 641 | 1 | 634 | 0.0 | 618 |
| MS.gene030132.t1 | MTR_5g041210 | 49.459 | 647 | 306 | 9 | 1 | 641 | 1 | 632 | 0.0 | 611 |
| MS.gene030132.t1 | MTR_2g018770 | 36.460 | 565 | 316 | 12 | 110 | 641 | 132 | 686 | 1.06e-111 | 351 |
| MS.gene030132.t1 | MTR_4g107360 | 37.477 | 539 | 304 | 15 | 120 | 641 | 90 | 612 | 4.08e-110 | 344 |
| MS.gene030132.t1 | MTR_5g037300 | 35.907 | 557 | 319 | 14 | 116 | 641 | 91 | 640 | 3.23e-106 | 335 |
| MS.gene030132.t1 | MTR_8g061960 | 34.532 | 556 | 322 | 15 | 116 | 641 | 106 | 649 | 1.14e-101 | 323 |
| MS.gene030132.t1 | MTR_2g018770 | 34.396 | 439 | 249 | 9 | 110 | 516 | 132 | 563 | 8.92e-68 | 232 |
| MS.gene030132.t1 | MTR_8g463930 | 25.954 | 262 | 173 | 9 | 391 | 641 | 80 | 331 | 5.10e-12 | 68.2 |
| MS.gene030132.t1 | MTR_2g078030 | 25.670 | 261 | 175 | 9 | 391 | 641 | 74 | 325 | 6.64e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030132.t1 | AT3G06440 | 53.715 | 646 | 250 | 8 | 1 | 642 | 19 | 619 | 0.0 | 686 |
| MS.gene030132.t1 | AT3G06440 | 51.008 | 645 | 240 | 9 | 1 | 642 | 19 | 590 | 0.0 | 633 |
| MS.gene030132.t1 | AT1G26810 | 47.005 | 651 | 324 | 7 | 1 | 641 | 1 | 640 | 0.0 | 582 |
| MS.gene030132.t1 | AT1G26810 | 47.005 | 651 | 324 | 7 | 1 | 641 | 1 | 640 | 0.0 | 582 |
| MS.gene030132.t1 | AT5G62620 | 38.372 | 516 | 280 | 10 | 157 | 641 | 170 | 678 | 9.61e-113 | 353 |
| MS.gene030132.t1 | AT1G74800 | 37.024 | 551 | 316 | 13 | 113 | 641 | 128 | 669 | 2.58e-110 | 347 |
| MS.gene030132.t1 | AT1G27120 | 36.502 | 526 | 301 | 11 | 139 | 641 | 124 | 639 | 2.08e-107 | 338 |
| MS.gene030132.t1 | AT1G27120 | 36.742 | 528 | 297 | 11 | 139 | 641 | 155 | 670 | 3.51e-107 | 338 |
| MS.gene030132.t1 | AT4G21060 | 35.110 | 544 | 315 | 13 | 128 | 641 | 146 | 681 | 5.64e-102 | 325 |
| MS.gene030132.t1 | AT4G21060 | 35.110 | 544 | 315 | 13 | 128 | 641 | 203 | 738 | 2.19e-101 | 325 |
| MS.gene030132.t1 | AT5G62620 | 36.080 | 449 | 249 | 10 | 157 | 574 | 170 | 611 | 3.04e-81 | 269 |
| MS.gene030132.t1 | AT2G26100 | 26.641 | 259 | 175 | 6 | 391 | 641 | 107 | 358 | 1.67e-16 | 82.0 |
| MS.gene030132.t1 | AT3G14960 | 27.969 | 261 | 173 | 7 | 389 | 641 | 79 | 332 | 3.25e-16 | 80.9 |
| MS.gene030132.t1 | AT1G53290 | 26.899 | 316 | 195 | 11 | 352 | 641 | 29 | 334 | 1.89e-15 | 78.6 |
| MS.gene030132.t1 | AT2G26100 | 26.106 | 226 | 155 | 3 | 391 | 610 | 107 | 326 | 2.10e-15 | 78.6 |
Find 123 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACAATTGCAATTTGCATTT+TGG | 0.096764 | 8.4:+11305820 | MS.gene030132:CDS |
| AATACATGGACTAGTGATTT+TGG | 0.137369 | 8.4:+11304432 | MS.gene030132:CDS |
| TTTCTACTGTACAGTCTTAA+AGG | 0.188302 | 8.4:+11303766 | MS.gene030132:CDS |
| AATCAACAAAAGGCATTAAT+TGG | 0.212309 | 8.4:-11305775 | None:intergenic |
| TTTAACTCCTTGAGCTATTT+CGG | 0.214747 | 8.4:-11304070 | None:intergenic |
| TGCAAGATAATTGGAGGATT+TGG | 0.247383 | 8.4:-11304354 | None:intergenic |
| AAAGGATTAGCCTCAGAAAA+AGG | 0.248836 | 8.4:-11304992 | None:intergenic |
| GCATATGGATTGAACAATTT+AGG | 0.250872 | 8.4:+11307112 | MS.gene030132:CDS |
| TTAACTCCTTGAGCTATTTC+GGG | 0.251324 | 8.4:-11304069 | None:intergenic |
| TTTAAGTCTGTTATCAGTTC+TGG | 0.251836 | 8.4:+11305223 | MS.gene030132:CDS |
| ATAGAGTTAATCTTGAATTA+TGG | 0.276791 | 8.4:+11305726 | MS.gene030132:CDS |
| ATAGCAAAATTCGTTGTCTT+TGG | 0.279953 | 8.4:+11306354 | MS.gene030132:CDS |
| GATATCTACTCACAACATTC+TGG | 0.289356 | 8.4:-11307273 | None:intergenic |
| CATTATAATGTGAGTCTTCC+TGG | 0.290225 | 8.4:+11304375 | MS.gene030132:CDS |
| ACATTATAATGCAAGATAAT+TGG | 0.291182 | 8.4:-11304363 | None:intergenic |
| GGATTTCATATGACTGTAAA+TGG | 0.300607 | 8.4:+11305043 | MS.gene030132:CDS |
| CTTCAGATGGCTTCCCTTTG+AGG | 0.308752 | 8.4:-11306078 | None:intergenic |
| TACCTAAAGCCATGATAAAA+AGG | 0.316882 | 8.4:-11303735 | None:intergenic |
| TAGGGATAGCTGGAGCCTTC+AGG | 0.328328 | 8.4:-11305298 | None:intergenic |
| CAATGAATGTTGTACTTGTT+TGG | 0.333423 | 8.4:+11304007 | MS.gene030132:CDS |
| TGTCATTGTCTTGCCAAGTT+TGG | 0.340771 | 8.4:-11304202 | None:intergenic |
| CAAGGATGGTGTTATGCCTT+TGG | 0.341498 | 8.4:+11307226 | MS.gene030132:CDS |
| TCGGCGCTCAAAGTTATTTC+CGG | 0.341737 | 8.4:-11305357 | None:intergenic |
| CTCCAGCTATCCCTAGAAAA+AGG | 0.342285 | 8.4:+11305306 | MS.gene030132:CDS |
| CTTCTAAGTCATCTCCTGAT+AGG | 0.344437 | 8.4:+11306122 | MS.gene030132:CDS |
| TCACTGCCACATTGTGGGTT+GGG | 0.361190 | 8.4:+11305014 | MS.gene030132:CDS |
| ATATCATTATCTTCCGTAAC+AGG | 0.362656 | 8.4:-11305257 | None:intergenic |
| TTGCTGTCCTTATCCCTATC+AGG | 0.368376 | 8.4:-11306136 | None:intergenic |
| ACTGGATCTCCCTTGTGGTT+TGG | 0.371403 | 8.4:+11304239 | MS.gene030132:CDS |
| TTTCGATGCAGATCAGAAAA+TGG | 0.377851 | 8.4:+11303900 | MS.gene030132:CDS |
| CCAAGTTTGGTCACAGAGAA+TGG | 0.379786 | 8.4:-11304189 | None:intergenic |
| CCATTCTCTGTGACCAAACT+TGG | 0.381533 | 8.4:+11304189 | MS.gene030132:CDS |
| TCCTTTCACTGCCACATTGT+GGG | 0.385409 | 8.4:+11305009 | MS.gene030132:CDS |
| GGCTAAAGGTTTACCTGTTA+CGG | 0.394794 | 8.4:+11305244 | MS.gene030132:CDS |
| TTCACTGCCACATTGTGGGT+TGG | 0.395199 | 8.4:+11305013 | MS.gene030132:CDS |
| AAGGATGGTGTTATGCCTTT+GGG | 0.400443 | 8.4:+11307227 | MS.gene030132:CDS |
| CTGTTATCAGTTCTGGCTAA+AGG | 0.403419 | 8.4:+11305230 | MS.gene030132:CDS |
| CTTTCTGAGGAAATATTAGA+AGG | 0.408472 | 8.4:-11304947 | None:intergenic |
| ACACTGATCGGCATCCCTAA+TGG | 0.427912 | 8.4:+11304279 | MS.gene030132:CDS |
| AAGATGTTGCCATGGGCATA+TGG | 0.431266 | 8.4:+11307097 | MS.gene030132:CDS |
| TAGAATCATTTGGTGGTGAA+TGG | 0.435315 | 8.4:-11303843 | None:intergenic |
| CCACCATGGGCACATGGTCC+TGG | 0.440633 | 8.4:+11306312 | MS.gene030132:CDS |
| AGATGGCTTCCCTTTGAGGC+TGG | 0.441178 | 8.4:-11306074 | None:intergenic |
| CAAAGGCATAACACCATCCT+TGG | 0.450169 | 8.4:-11307225 | None:intergenic |
| TTAAAGAGGCTTCTGTAGCT+TGG | 0.451470 | 8.4:+11304088 | MS.gene030132:CDS |
| GAATGGCTCTGAGGAGGTCC+TGG | 0.454334 | 8.4:+11305378 | MS.gene030132:CDS |
| TGGACGGAAGCTCAAGCATA+TGG | 0.456280 | 8.4:+11305746 | MS.gene030132:CDS |
| TTGAAAATGAAGAAGTGGTA+TGG | 0.458715 | 8.4:+11303709 | None:intergenic |
| CAGATGATGATGCTTTCATA+AGG | 0.464275 | 8.4:+11306035 | MS.gene030132:CDS |
| GTCATCTCCTGATAGGGATA+AGG | 0.468655 | 8.4:+11306129 | MS.gene030132:CDS |
| CTTTCTGCAGTTTCTCCCAA+AGG | 0.470786 | 8.4:-11307242 | None:intergenic |
| CAATATGAGGCTGTACGTTC+TGG | 0.471244 | 8.4:+11305404 | MS.gene030132:CDS |
| ATCCTTTCACTGCCACATTG+TGG | 0.477470 | 8.4:+11305008 | MS.gene030132:CDS |
| GTCTATCTTACTAATCTTCG+AGG | 0.478025 | 8.4:-11304145 | None:intergenic |
| ATTCGTTGTCTTTGGCCACC+AGG | 0.479400 | 8.4:+11306362 | MS.gene030132:CDS |
| GTCAGCACGATTAAAGTAGC+AGG | 0.484951 | 8.4:+11305197 | MS.gene030132:CDS |
| AGCTTTCAGATTGAGCTAGC+TGG | 0.485254 | 8.4:+11304312 | MS.gene030132:CDS |
| ATTGAACAATTTAGGAATGG+TGG | 0.485712 | 8.4:+11307120 | MS.gene030132:CDS |
| AAACTATAATAATCAACAAA+AGG | 0.494113 | 8.4:-11305785 | None:intergenic |
| TTTCTGATCTGCATCGAAAG+AGG | 0.495941 | 8.4:-11303896 | None:intergenic |
| TTCTAAGTCATCTCCTGATA+GGG | 0.503233 | 8.4:+11306123 | MS.gene030132:CDS |
| TTGATCGGAGTATTCTCTAC+CGG | 0.508883 | 8.4:+11305338 | MS.gene030132:CDS |
| AGGACCTCCTCAGAGCCATT+CGG | 0.510477 | 8.4:-11305376 | None:intergenic |
| TCATGCTAAATATACCTTTG+CGG | 0.511523 | 8.4:-11304500 | None:intergenic |
| CGTATATTGTTCAAAATACA+TGG | 0.517784 | 8.4:+11304418 | MS.gene030132:CDS |
| ACATTGTGGGTTGGGTCAGA+AGG | 0.519182 | 8.4:+11305022 | MS.gene030132:CDS |
| TCGCGAGATATGACATATCC+AGG | 0.523922 | 8.4:-11306330 | None:intergenic |
| GAAGTGCTTTCCAGCCTCAA+AGG | 0.527978 | 8.4:+11306064 | MS.gene030132:CDS |
| ATGTTAGCAGAACCATGAGC+AGG | 0.528160 | 8.4:-11304477 | None:intergenic |
| ACCCACAATGTGGCAGTGAA+AGG | 0.532066 | 8.4:-11305010 | None:intergenic |
| GATTCTTCTATTACACTGAT+CGG | 0.533821 | 8.4:+11304267 | MS.gene030132:CDS |
| TAAATTAGAAGATGTTGCCA+TGG | 0.541216 | 8.4:+11307089 | MS.gene030132:CDS |
| TGGCACCAAAACCAACAAAA+CGG | 0.544787 | 8.4:+11303920 | MS.gene030132:CDS |
| AAATAACTTTGAGCGCCGAA+TGG | 0.546477 | 8.4:+11305361 | MS.gene030132:CDS |
| AAGTGCTTTCCAGCCTCAAA+GGG | 0.551248 | 8.4:+11306065 | MS.gene030132:CDS |
| AGTTCTATGTGCACTTTCTG+AGG | 0.553560 | 8.4:-11304960 | None:intergenic |
| AAATTAGAAGATGTTGCCAT+GGG | 0.554916 | 8.4:+11307090 | MS.gene030132:CDS |
| CCACATTTGATACATGTCAC+AGG | 0.555339 | 8.4:+11303943 | MS.gene030132:CDS |
| CCATCTGAAGGCCTCTTGTA+CGG | 0.556208 | 8.4:+11306091 | MS.gene030132:CDS |
| TCTTTAATAGAATCATTTGG+TGG | 0.557042 | 8.4:-11303850 | None:intergenic |
| TGGATTGAACAATTTAGGAA+TGG | 0.558371 | 8.4:+11307117 | MS.gene030132:CDS |
| TTATAATGCAAGATAATTGG+AGG | 0.560890 | 8.4:-11304360 | None:intergenic |
| GTTTATTGAAAATGAAGAAG+TGG | 0.561747 | 8.4:+11303704 | None:intergenic |
| GAGGAAAGATGCCCTGCTCA+TGG | 0.566659 | 8.4:+11304465 | MS.gene030132:CDS |
| CTCAAAGGGAAGCCATCTGA+AGG | 0.569898 | 8.4:+11306079 | MS.gene030132:CDS |
| CACATGATACGTACCCACCA+TGG | 0.571594 | 8.4:+11306298 | MS.gene030132:CDS |
| TTCATATGACTGTAAATGGA+AGG | 0.574417 | 8.4:+11305047 | MS.gene030132:CDS |
| ATTTACGTTTGTTGCTGTCG+AGG | 0.575180 | 8.4:+11304034 | MS.gene030132:CDS |
| AATAGCTCAAGGAGTTAAAG+AGG | 0.578574 | 8.4:+11304074 | MS.gene030132:CDS |
| CGATGCAGAATCTTGAACCA+TGG | 0.589458 | 8.4:+11305171 | MS.gene030132:intron |
| ACATGATACGTACCCACCAT+GGG | 0.589834 | 8.4:+11306299 | MS.gene030132:CDS |
| CAGGACCATGTGCCCATGGT+GGG | 0.590057 | 8.4:-11306311 | None:intergenic |
| TATCCAGGACCATGTGCCCA+TGG | 0.590642 | 8.4:-11306315 | None:intergenic |
| TACAGCCTCATATTGCATCC+AGG | 0.592681 | 8.4:-11305396 | None:intergenic |
| TTCATTATGAGAATGATGAG+AGG | 0.592883 | 8.4:+11307151 | MS.gene030132:CDS |
| ATCACACTGGATCTCCCTTG+TGG | 0.593261 | 8.4:+11304234 | MS.gene030132:CDS |
| TTGCGCATTATCAAAATCCA+AGG | 0.595140 | 8.4:+11307208 | MS.gene030132:CDS |
| ACGTACCCACCATGGGCACA+TGG | 0.599828 | 8.4:+11306306 | MS.gene030132:CDS |
| CACATTTGATACATGTCACA+GGG | 0.607371 | 8.4:+11303944 | MS.gene030132:CDS |
| TTAATCGTGCTGACTAACCA+TGG | 0.610947 | 8.4:-11305188 | None:intergenic |
| AAGATATTAGACCGTACAAG+AGG | 0.616932 | 8.4:-11306102 | None:intergenic |
| AAAATGAAGAAGTGGTATGG+AGG | 0.619161 | 8.4:+11303712 | None:intergenic |
| AGTTAATCTTGAATTATGGA+CGG | 0.620195 | 8.4:+11305730 | MS.gene030132:CDS |
| AGCTGGACAAGAGCTAGAAG+AGG | 0.621403 | 8.4:+11304329 | MS.gene030132:CDS |
| CCAGGACCATGTGCCCATGG+TGG | 0.623499 | 8.4:-11306312 | None:intergenic |
| CCGTACAAGAGGCCTTCAGA+TGG | 0.626770 | 8.4:-11306091 | None:intergenic |
| GAATCTACGACCAAACCACA+AGG | 0.628470 | 8.4:-11304249 | None:intergenic |
| TTGTTCAATCCATATGCCCA+TGG | 0.632568 | 8.4:-11307106 | None:intergenic |
| AGCGCCGAATGGCTCTGAGG+AGG | 0.634744 | 8.4:+11305372 | MS.gene030132:CDS |
| GCATTATCAAAATCCAAGGA+TGG | 0.638592 | 8.4:+11307212 | MS.gene030132:CDS |
| TCGAAGATTAGTAAGATAGA+CGG | 0.641292 | 8.4:+11304147 | MS.gene030132:CDS |
| GACAGATAGTGAAATCACAC+TGG | 0.646133 | 8.4:+11304221 | MS.gene030132:CDS |
| GGTTCTGCTAACATCCGCAA+AGG | 0.648279 | 8.4:+11304486 | MS.gene030132:CDS |
| TGTTAGCAGAACCATGAGCA+GGG | 0.651531 | 8.4:-11304476 | None:intergenic |
| GAGGTCCTGGATGCAATATG+AGG | 0.652896 | 8.4:+11305391 | MS.gene030132:CDS |
| TTGAGCGCCGAATGGCTCTG+AGG | 0.661301 | 8.4:+11305369 | MS.gene030132:CDS |
| GCTTTGCCCGAAATAGCTCA+AGG | 0.661971 | 8.4:+11304063 | MS.gene030132:CDS |
| ATAGGGATAAGGACAGCAAG+TGG | 0.679605 | 8.4:+11306140 | MS.gene030132:CDS |
| TTCTGACCCAACCCACAATG+TGG | 0.693365 | 8.4:-11305020 | None:intergenic |
| TGTTGATGTTGAGAACCTGA+AGG | 0.697040 | 8.4:+11305283 | MS.gene030132:CDS |
| CCTGTGACATGTATCAAATG+TGG | 0.710894 | 8.4:-11303943 | None:intergenic |
| CAAGTGGTACATCAGTGACG+AGG | 0.722140 | 8.4:+11306156 | MS.gene030132:CDS |
| AATCTACGACCAAACCACAA+GGG | 0.735183 | 8.4:-11304248 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAATTAAATAATTGGAA+TGG | + | chr8.4:11305123-11305142 | MS.gene030132:intron | 10.0% |
| !! | AAACTATAATAATCAACAAA+AGG | - | chr8.4:11305788-11305807 | None:intergenic | 15.0% |
| !! | ACTGCTAAAAATTAAATAAT+TGG | + | chr8.4:11305118-11305137 | MS.gene030132:intron | 15.0% |
| !! | TTAATGTCATCTTAAAATTT+GGG | - | chr8.4:11306647-11306666 | None:intergenic | 15.0% |
| !! | TTTAATGTCATCTTAAAATT+TGG | - | chr8.4:11306648-11306667 | None:intergenic | 15.0% |
| !!! | ATTTTTTTAGCACAATAAAA+TGG | + | chr8.4:11305523-11305542 | MS.gene030132:intron | 15.0% |
| !!! | CATTATCTTATTGTTATTTT+AGG | + | chr8.4:11306269-11306288 | MS.gene030132:intron | 15.0% |
| !!! | TTTTCTTTAATAGAATCATT+TGG | - | chr8.4:11303856-11303875 | None:intergenic | 15.0% |
| !! | AAATAAAATTCAGCAGTTAA+TGG | - | chr8.4:11307048-11307067 | None:intergenic | 20.0% |
| !! | ACATTATAATGCAAGATAAT+TGG | - | chr8.4:11304366-11304385 | None:intergenic | 20.0% |
| !! | ATAGAATAAAAATGCAATGA+TGG | - | chr8.4:11306993-11307012 | None:intergenic | 20.0% |
| !! | ATAGAGTTAATCTTGAATTA+TGG | + | chr8.4:11305726-11305745 | MS.gene030132:CDS | 20.0% |
| !! | ATTATAACAAAACTTCATGA+TGG | - | chr8.4:11306423-11306442 | None:intergenic | 20.0% |
| !! | ATTTCAAGGATATATCTTAA+GGG | + | chr8.4:11306452-11306471 | MS.gene030132:intron | 20.0% |
| !! | ATTTGATTCCTCTTAAAATT+TGG | - | chr8.4:11306858-11306877 | None:intergenic | 20.0% |
| !! | CTGAAAATGAACTTATAAAT+GGG | + | chr8.4:11306786-11306805 | MS.gene030132:intron | 20.0% |
| !! | GAAAAATAAAAATTTATGGG+AGG | - | chr8.4:11306242-11306261 | None:intergenic | 20.0% |
| !! | TAAAAGAATTGGAACTTAAA+TGG | + | chr8.4:11306918-11306937 | MS.gene030132:intron | 20.0% |
| !! | TATTTCAAGGATATATCTTA+AGG | + | chr8.4:11306451-11306470 | MS.gene030132:intron | 20.0% |
| !! | TCGACAAAAATATAAAATGT+TGG | - | chr8.4:11305154-11305173 | None:intergenic | 20.0% |
| !! | TCTGAAAATGAACTTATAAA+TGG | + | chr8.4:11306785-11306804 | MS.gene030132:intron | 20.0% |
| !! | TGAAAATGAACTTATAAATG+GGG | + | chr8.4:11306787-11306806 | MS.gene030132:intron | 20.0% |
| !! | TTATAACAAAACTTCATGAT+GGG | - | chr8.4:11306422-11306441 | None:intergenic | 20.0% |
| !!! | AAAAATCACATATTTCTAGT+TGG | - | chr8.4:11304630-11304649 | None:intergenic | 20.0% |
| !!! | CATGTATTTTGAACAATATA+CGG | - | chr8.4:11304420-11304439 | None:intergenic | 20.0% |
| !!! | GAAGTTTTGTTATAATCTTT+CGG | + | chr8.4:11306427-11306446 | MS.gene030132:intron | 20.0% |
| !!! | TCTTATTGTTATTTTAGGAA+TGG | + | chr8.4:11306274-11306293 | MS.gene030132:intron | 20.0% |
| !!! | TTAATATCACAAATTTTCCT+GGG | + | chr8.4:11306883-11306902 | MS.gene030132:intron | 20.0% |
| !!! | TTTTCATGATGTATTTAGAA+GGG | - | chr8.4:11306015-11306034 | None:intergenic | 20.0% |
| ! | ACAAGAGAGGAATAATTTAA+AGG | - | chr8.4:11305656-11305675 | None:intergenic | 25.0% |
| ! | ACCACTTATGTTAAAAGAAT+TGG | + | chr8.4:11306907-11306926 | MS.gene030132:intron | 25.0% |
| ! | AGTTAATCTTGAATTATGGA+CGG | + | chr8.4:11305730-11305749 | MS.gene030132:CDS | 25.0% |
| ! | ATAATCTTTCGGATATTTCA+AGG | + | chr8.4:11306438-11306457 | MS.gene030132:intron | 25.0% |
| ! | ATTAAGAGTCTCAAATTGAT+TGG | + | chr8.4:11306753-11306772 | MS.gene030132:intron | 25.0% |
| ! | ATTCCTCTTAAAATTTGGAT+CGG | - | chr8.4:11306853-11306872 | None:intergenic | 25.0% |
| ! | CGTATATTGTTCAAAATACA+TGG | + | chr8.4:11304418-11304437 | MS.gene030132:CDS | 25.0% |
| ! | CTTAAATATGTATTCGCAAA+AGG | + | chr8.4:11306959-11306978 | MS.gene030132:intron | 25.0% |
| ! | GAAAATGAACTTATAAATGG+GGG | + | chr8.4:11306788-11306807 | MS.gene030132:intron | 25.0% |
| ! | TCTTTAATAGAATCATTTGG+TGG | - | chr8.4:11303853-11303872 | None:intergenic | 25.0% |
| ! | TTATAATGCAAGATAATTGG+AGG | - | chr8.4:11304363-11304382 | None:intergenic | 25.0% |
| ! | TTGCTATAATATTGAATGCA+TGG | - | chr8.4:11305624-11305643 | None:intergenic | 25.0% |
| !! | AATATGTGATTTTTATGTCG+AGG | + | chr8.4:11304636-11304655 | MS.gene030132:intron | 25.0% |
| !! | ACAATTGCAATTTGCATTTT+GGG | + | chr8.4:11305821-11305840 | MS.gene030132:CDS | 25.0% |
| !! | ATGAAACATCTTTTGCATAT+AGG | + | chr8.4:11305071-11305090 | MS.gene030132:CDS | 25.0% |
| !! | ATTCTATTCATCTTGCTATA+TGG | + | chr8.4:11307006-11307025 | MS.gene030132:intron | 25.0% |
| !! | CTTAATATCACAAATTTTCC+TGG | + | chr8.4:11306882-11306901 | MS.gene030132:intron | 25.0% |
| !! | GTTTATTTGTTAGTTAATGC+TGG | + | chr8.4:11305892-11305911 | MS.gene030132:intron | 25.0% |
| !! | GTTTTCATGATGTATTTAGA+AGG | - | chr8.4:11306016-11306035 | None:intergenic | 25.0% |
| !! | TCCAATTCTTTTAACATAAG+TGG | - | chr8.4:11306911-11306930 | None:intergenic | 25.0% |
| !! | TGAAACATCTTTTGCATATA+GGG | + | chr8.4:11305072-11305091 | MS.gene030132:CDS | 25.0% |
| !!! | AAGCAGTGATTTTTATTTAG+TGG | + | chr8.4:11305920-11305939 | MS.gene030132:intron | 25.0% |
| !!! | AATCAACAAAAGGCATTAAT+TGG | - | chr8.4:11305778-11305797 | None:intergenic | 25.0% |
| !!! | ATGCAATTATAATGGACAAA+AGG | + | chr8.4:11304599-11304618 | MS.gene030132:intron | 25.0% |
| AAAACCTAACAAAAACCCAT+TGG | + | chr8.4:11306665-11306684 | MS.gene030132:intron | 30.0% | |
| AAAATTCAGCAGTTAATGGA+AGG | - | chr8.4:11307044-11307063 | None:intergenic | 30.0% | |
| AAACCTAACAAAAACCCATT+GGG | + | chr8.4:11306666-11306685 | MS.gene030132:intron | 30.0% | |
| AAACTGCACTCAAGAATAAA+AGG | - | chr8.4:11304786-11304805 | None:intergenic | 30.0% | |
| AAATTAGAAGATGTTGCCAT+GGG | + | chr8.4:11307090-11307109 | MS.gene030132:CDS | 30.0% | |
| ACAAAATGAGTTCATAAGTG+GGG | + | chr8.4:11306572-11306591 | MS.gene030132:intron | 30.0% | |
| AGATTTGTAATGGTTGAGTT+AGG | + | chr8.4:11306616-11306635 | MS.gene030132:intron | 30.0% | |
| ATAGCAAAATTCGTTGTCTT+TGG | + | chr8.4:11306354-11306373 | MS.gene030132:CDS | 30.0% | |
| ATATCATTATCTTCCGTAAC+AGG | - | chr8.4:11305260-11305279 | None:intergenic | 30.0% | |
| ATTGAACAATTTAGGAATGG+TGG | + | chr8.4:11307120-11307139 | MS.gene030132:CDS | 30.0% | |
| CAACAATCAAGTAAAGTATG+CGG | - | chr8.4:11306508-11306527 | None:intergenic | 30.0% | |
| CAATGAATGTTGTACTTGTT+TGG | + | chr8.4:11304007-11304026 | MS.gene030132:CDS | 30.0% | |
| CACAAAATGAGTTCATAAGT+GGG | + | chr8.4:11306571-11306590 | MS.gene030132:intron | 30.0% | |
| GATTCTTCTATTACACTGAT+CGG | + | chr8.4:11304267-11304286 | MS.gene030132:CDS | 30.0% | |
| GCATACTTTACTTGATTGTT+GGG | + | chr8.4:11306507-11306526 | MS.gene030132:intron | 30.0% | |
| GGATTTCATATGACTGTAAA+TGG | + | chr8.4:11305043-11305062 | MS.gene030132:CDS | 30.0% | |
| TAAATTAGAAGATGTTGCCA+TGG | + | chr8.4:11307089-11307108 | MS.gene030132:CDS | 30.0% | |
| TAACTCAACCATTACAAATC+TGG | - | chr8.4:11306617-11306636 | None:intergenic | 30.0% | |
| TACCTAAAGCCATGATAAAA+AGG | - | chr8.4:11303738-11303757 | None:intergenic | 30.0% | |
| TAGCACAATAAAATGGCAAT+AGG | + | chr8.4:11305530-11305549 | MS.gene030132:intron | 30.0% | |
| TCATGCTAAATATACCTTTG+CGG | - | chr8.4:11304503-11304522 | None:intergenic | 30.0% | |
| TCGAAGATTAGTAAGATAGA+CGG | + | chr8.4:11304147-11304166 | MS.gene030132:CDS | 30.0% | |
| TCGTTTGCATGCAATTATAA+TGG | + | chr8.4:11304591-11304610 | MS.gene030132:intron | 30.0% | |
| TGGATTGAACAATTTAGGAA+TGG | + | chr8.4:11307117-11307136 | MS.gene030132:CDS | 30.0% | |
| TGTCATCTTAAAATTTGGGT+TGG | - | chr8.4:11306643-11306662 | None:intergenic | 30.0% | |
| TTCATATGACTGTAAATGGA+AGG | + | chr8.4:11305047-11305066 | MS.gene030132:CDS | 30.0% | |
| TTCATTATGAGAATGATGAG+AGG | + | chr8.4:11307151-11307170 | MS.gene030132:CDS | 30.0% | |
| TTCCTCTTAAAATTTGGATC+GGG | - | chr8.4:11306852-11306871 | None:intergenic | 30.0% | |
| TTTAACTCCTTGAGCTATTT+CGG | - | chr8.4:11304073-11304092 | None:intergenic | 30.0% | |
| TTTAAGTCTGTTATCAGTTC+TGG | + | chr8.4:11305223-11305242 | MS.gene030132:CDS | 30.0% | |
| TTTATAATTCGAACCTAGCT+TGG | + | chr8.4:11304674-11304693 | MS.gene030132:intron | 30.0% | |
| TTTCTACTGTACAGTCTTAA+AGG | + | chr8.4:11303766-11303785 | MS.gene030132:CDS | 30.0% | |
| ! | AACAAAACAAGCCTTTTTCT+AGG | - | chr8.4:11305320-11305339 | None:intergenic | 30.0% |
| ! | AATTGCAATTTGCATTTTGG+GGG | + | chr8.4:11305823-11305842 | MS.gene030132:CDS | 30.0% |
| ! | ACAAAACAAGCCTTTTTCTA+GGG | - | chr8.4:11305319-11305338 | None:intergenic | 30.0% |
| ! | AGAACAGTTTTTAACAAGAG+AGG | - | chr8.4:11305669-11305688 | None:intergenic | 30.0% |
| ! | CAATTGCAATTTGCATTTTG+GGG | + | chr8.4:11305822-11305841 | MS.gene030132:CDS | 30.0% |
| ! | CTTTCTGAGGAAATATTAGA+AGG | - | chr8.4:11304950-11304969 | None:intergenic | 30.0% |
| ! | GACAATTGCAATTTGCATTT+TGG | + | chr8.4:11305820-11305839 | MS.gene030132:CDS | 30.0% |
| ! | GCATATGGATTGAACAATTT+AGG | + | chr8.4:11307112-11307131 | MS.gene030132:CDS | 30.0% |
| ! | GTCATCTTAAAATTTGGGTT+GGG | - | chr8.4:11306642-11306661 | None:intergenic | 30.0% |
| !! | TTACTTTGAGTTTTCTTTCC+TGG | - | chr8.4:11306383-11306402 | None:intergenic | 30.0% |
| !!! | AAAAGGCTTGTTTTGTTGAT+CGG | + | chr8.4:11305323-11305342 | MS.gene030132:CDS | 30.0% |
| !!! | AATACATGGACTAGTGATTT+TGG | + | chr8.4:11304432-11304451 | MS.gene030132:CDS | 30.0% |
| !!! | AATGGACAGTTTTGATTTTC+TGG | - | chr8.4:11304174-11304193 | None:intergenic | 30.0% |
| !!! | ATACATGGACTAGTGATTTT+GGG | + | chr8.4:11304433-11304452 | MS.gene030132:CDS | 30.0% |
| !!! | ATGGACAGTTTTGATTTTCT+GGG | - | chr8.4:11304173-11304192 | None:intergenic | 30.0% |
| !!! | TTGAGTGCAGTTTTTTATGA+GGG | + | chr8.4:11304793-11304812 | MS.gene030132:intron | 30.0% |
| AACAAGACATAATCCAAGCT+AGG | - | chr8.4:11304690-11304709 | None:intergenic | 35.0% | |
| AAGATATTAGACCGTACAAG+AGG | - | chr8.4:11306105-11306124 | None:intergenic | 35.0% | |
| AATAGCTCAAGGAGTTAAAG+AGG | + | chr8.4:11304074-11304093 | MS.gene030132:CDS | 35.0% | |
| CAAAATGAGTTCATAAGTGG+GGG | + | chr8.4:11306573-11306592 | MS.gene030132:intron | 35.0% | |
| CACATTTGATACATGTCACA+GGG | + | chr8.4:11303944-11303963 | MS.gene030132:CDS | 35.0% | |
| CATCAACTACATCATAGAGT+TGG | - | chr8.4:11304847-11304866 | None:intergenic | 35.0% | |
| CATTATAATGTGAGTCTTCC+TGG | + | chr8.4:11304375-11304394 | MS.gene030132:CDS | 35.0% | |
| CCACAAAATGAGTTCATAAG+TGG | + | chr8.4:11306570-11306589 | MS.gene030132:intron | 35.0% | |
| CGCATACTTTACTTGATTGT+TGG | + | chr8.4:11306506-11306525 | MS.gene030132:intron | 35.0% | |
| CTCAAATTGATTGGATGAGA+AGG | + | chr8.4:11306762-11306781 | MS.gene030132:intron | 35.0% | |
| CTTACAAGCCAGATTTGTAA+TGG | + | chr8.4:11306606-11306625 | MS.gene030132:intron | 35.0% | |
| GCATTATCAAAATCCAAGGA+TGG | + | chr8.4:11307212-11307231 | MS.gene030132:CDS | 35.0% | |
| GGACTTATCTCATCAAATGT+GGG | - | chr8.4:11306552-11306571 | None:intergenic | 35.0% | |
| GTCTATCTTACTAATCTTCG+AGG | - | chr8.4:11304148-11304167 | None:intergenic | 35.0% | |
| TACCATCTTCATTCCTTAGT+AGG | + | chr8.4:11304714-11304733 | MS.gene030132:intron | 35.0% | |
| TCAATCCTTACAAAACCGTA+AGG | - | chr8.4:11306823-11306842 | None:intergenic | 35.0% | |
| TGCAAGATAATTGGAGGATT+TGG | - | chr8.4:11304357-11304376 | None:intergenic | 35.0% | |
| TGGACTTATCTCATCAAATG+TGG | - | chr8.4:11306553-11306572 | None:intergenic | 35.0% | |
| TTCTAAGTCATCTCCTGATA+GGG | + | chr8.4:11306123-11306142 | MS.gene030132:CDS | 35.0% | |
| TTGCGCATTATCAAAATCCA+AGG | + | chr8.4:11307208-11307227 | MS.gene030132:CDS | 35.0% | |
| TTTACTTGATTGTTGGGACT+GGG | + | chr8.4:11306513-11306532 | MS.gene030132:intron | 35.0% | |
| TTTCGATGCAGATCAGAAAA+TGG | + | chr8.4:11303900-11303919 | MS.gene030132:CDS | 35.0% | |
| ! | AACATCTTTTGCATATAGGG+AGG | + | chr8.4:11305075-11305094 | MS.gene030132:CDS | 35.0% |
| ! | AAGCTACTGTTTTGTCCATT+AGG | - | chr8.4:11304297-11304316 | None:intergenic | 35.0% |
| ! | ACAAAACTTCATGATGGGAA+AGG | - | chr8.4:11306417-11306436 | None:intergenic | 35.0% |
| ! | AGCTACTGTTTTGTCCATTA+GGG | - | chr8.4:11304296-11304315 | None:intergenic | 35.0% |
| ! | CAGATGATGATGCTTTCATA+AGG | + | chr8.4:11306035-11306054 | MS.gene030132:CDS | 35.0% |
| ! | CATATAGGGAGGTATGATAT+AGG | + | chr8.4:11305086-11305105 | MS.gene030132:intron | 35.0% |
| ! | CATTACAAATCTGGCTTGTA+AGG | - | chr8.4:11306608-11306627 | None:intergenic | 35.0% |
| ! | CCACTTATGAACTCATTTTG+TGG | - | chr8.4:11306573-11306592 | None:intergenic | 35.0% |
| ! | GTTGCTGTCAGATTTTTCAT+TGG | + | chr8.4:11305431-11305450 | MS.gene030132:CDS | 35.0% |
| ! | TGCTAATTTCCCTTTTTCTG+AGG | + | chr8.4:11304982-11305001 | MS.gene030132:CDS | 35.0% |
| ! | TTAACTCCTTGAGCTATTTC+GGG | - | chr8.4:11304072-11304091 | None:intergenic | 35.0% |
| ! | TTTATGAGGGAAGCTTTTAG+TGG | + | chr8.4:11304806-11304825 | MS.gene030132:intron | 35.0% |
| ! | TTTTAACATAAGTGGTTCCC+AGG | - | chr8.4:11306903-11306922 | None:intergenic | 35.0% |
| !! | AAAGGATTAGCCTCAGAAAA+AGG | - | chr8.4:11304995-11305014 | None:intergenic | 35.0% |
| !! | AAGGATTAGCCTCAGAAAAA+GGG | - | chr8.4:11304994-11305013 | None:intergenic | 35.0% |
| !! | CTCGTATTAGAAGTGTCAAA+AGG | + | chr8.4:11306479-11306498 | MS.gene030132:intron | 35.0% |
| !! | GGTTTTGTAAGGATTGAGTT+AGG | + | chr8.4:11306826-11306845 | MS.gene030132:intron | 35.0% |
| !! | TAGAATCATTTGGTGGTGAA+TGG | - | chr8.4:11303846-11303865 | None:intergenic | 35.0% |
| !!! | CTTGAGTGCAGTTTTTTATG+AGG | + | chr8.4:11304792-11304811 | MS.gene030132:intron | 35.0% |
| AACTACATTAGCAACACCTC+AGG | + | chr8.4:11304744-11304763 | MS.gene030132:intron | 40.0% | |
| AAGCAAGATAGCATAACCTG+AGG | - | chr8.4:11304763-11304782 | None:intergenic | 40.0% | |
| AATCTACGACCAAACCACAA+GGG | - | chr8.4:11304251-11304270 | None:intergenic | 40.0% | |
| AGCCTACTAAGGAATGAAGA+TGG | - | chr8.4:11304719-11304738 | None:intergenic | 40.0% | |
| AGTTCTATGTGCACTTTCTG+AGG | - | chr8.4:11304963-11304982 | None:intergenic | 40.0% | |
| CACTCACTATTGGAACACTT+GGG | + | chr8.4:11306690-11306709 | MS.gene030132:intron | 40.0% | |
| CCACATTTGATACATGTCAC+AGG | + | chr8.4:11303943-11303962 | MS.gene030132:CDS | 40.0% | |
| CCTGTGACATGTATCAAATG+TGG | - | chr8.4:11303946-11303965 | None:intergenic | 40.0% | |
| CTTCTAAGTCATCTCCTGAT+AGG | + | chr8.4:11306122-11306141 | MS.gene030132:CDS | 40.0% | |
| CTTTACTTGATTGTTGGGAC+TGG | + | chr8.4:11306512-11306531 | MS.gene030132:intron | 40.0% | |
| GACAGATAGTGAAATCACAC+TGG | + | chr8.4:11304221-11304240 | MS.gene030132:CDS | 40.0% | |
| GGCTAAAGGTTTACCTGTTA+CGG | + | chr8.4:11305244-11305263 | MS.gene030132:CDS | 40.0% | |
| GGGTTAAGACTGTTAGAGTA+TGG | - | chr8.4:11305576-11305595 | None:intergenic | 40.0% | |
| GTAGTTACTACAGCCTACTA+AGG | - | chr8.4:11304730-11304749 | None:intergenic | 40.0% | |
| TGGCACCAAAACCAACAAAA+CGG | + | chr8.4:11303920-11303939 | MS.gene030132:CDS | 40.0% | |
| TGTCATTGTCTTGCCAAGTT+TGG | - | chr8.4:11304205-11304224 | None:intergenic | 40.0% | |
| TGTTGATGTTGAGAACCTGA+AGG | + | chr8.4:11305283-11305302 | MS.gene030132:CDS | 40.0% | |
| TTAAAGAGGCTTCTGTAGCT+TGG | + | chr8.4:11304088-11304107 | MS.gene030132:CDS | 40.0% | |
| TTAGTCCACACTACAGCATT+TGG | - | chr8.4:11305600-11305619 | None:intergenic | 40.0% | |
| TTGTTCAATCCATATGCCCA+TGG | - | chr8.4:11307109-11307128 | None:intergenic | 40.0% | |
| TTTCTGATCTGCATCGAAAG+AGG | - | chr8.4:11303899-11303918 | None:intergenic | 40.0% | |
| ! | AAACTTCATGATGGGAAAGG+AGG | - | chr8.4:11306414-11306433 | None:intergenic | 40.0% |
| ! | ATCTCTGTCATGTTTTCTCC+AGG | - | chr8.4:11304396-11304415 | None:intergenic | 40.0% |
| ! | ATTTACGTTTGTTGCTGTCG+AGG | + | chr8.4:11304034-11304053 | MS.gene030132:CDS | 40.0% |
| ! | CTGTTATCAGTTCTGGCTAA+AGG | + | chr8.4:11305230-11305249 | MS.gene030132:CDS | 40.0% |
| ! | GATGAGAGGTTTTACAATGC+TGG | + | chr8.4:11307165-11307184 | MS.gene030132:CDS | 40.0% |
| ! | GGCCTTTTTATCATGGCTTT+AGG | + | chr8.4:11303733-11303752 | MS.gene030132:CDS | 40.0% |
| ! | GTATGGAGGCCTTTTTATCA+TGG | + | chr8.4:11303726-11303745 | MS.gene030132:CDS | 40.0% |
| ! | TTGATCGGAGTATTCTCTAC+CGG | + | chr8.4:11305338-11305357 | MS.gene030132:CDS | 40.0% |
| !! | AAATAACTTTGAGCGCCGAA+TGG | + | chr8.4:11305361-11305380 | MS.gene030132:CDS | 40.0% |
| !! | AAGGATGGTGTTATGCCTTT+GGG | + | chr8.4:11307227-11307246 | MS.gene030132:CDS | 40.0% |
| !! | ATCAAATGTGGCCGTTTTGT+TGG | - | chr8.4:11303934-11303953 | None:intergenic | 40.0% |
| !! | CTTTGAGTTTTCTTTCCTGG+TGG | - | chr8.4:11306380-11306399 | None:intergenic | 40.0% |
| !! | TCTCACCTTACGGTTTTGTA+AGG | + | chr8.4:11306815-11306834 | MS.gene030132:intron | 40.0% |
| !! | TGTTTTGCTGACTGCTTTTG+TGG | - | chr8.4:11303799-11303818 | None:intergenic | 40.0% |
| !! | TTAATCGTGCTGACTAACCA+TGG | - | chr8.4:11305191-11305210 | None:intergenic | 40.0% |
| !!! | ATGGACTAGTGATTTTGGGT+GGG | + | chr8.4:11304437-11304456 | MS.gene030132:CDS | 40.0% |
| AAGATGTTGCCATGGGCATA+TGG | + | chr8.4:11307097-11307116 | MS.gene030132:CDS | 45.0% | |
| AAGTGCTTTCCAGCCTCAAA+GGG | + | chr8.4:11306065-11306084 | MS.gene030132:CDS | 45.0% | |
| ACACTCCATATGTCCAGTCT+TGG | + | chr8.4:11306715-11306734 | MS.gene030132:intron | 45.0% | |
| ACATGATACGTACCCACCAT+GGG | + | chr8.4:11306299-11306318 | MS.gene030132:CDS | 45.0% | |
| AGCTTTCAGATTGAGCTAGC+TGG | + | chr8.4:11304312-11304331 | MS.gene030132:CDS | 45.0% | |
| ATAGGGATAAGGACAGCAAG+TGG | + | chr8.4:11306140-11306159 | MS.gene030132:CDS | 45.0% | |
| ATATGTCATACGCCCAAGAC+TGG | - | chr8.4:11306731-11306750 | None:intergenic | 45.0% | |
| ATCCTTTCACTGCCACATTG+TGG | + | chr8.4:11305008-11305027 | MS.gene030132:CDS | 45.0% | |
| ATGTTAGCAGAACCATGAGC+AGG | - | chr8.4:11304480-11304499 | None:intergenic | 45.0% | |
| CAATATGAGGCTGTACGTTC+TGG | + | chr8.4:11305404-11305423 | MS.gene030132:CDS | 45.0% | |
| CACTCCATATGTCCAGTCTT+GGG | + | chr8.4:11306716-11306735 | MS.gene030132:intron | 45.0% | |
| CCAAGTGTTCCAATAGTGAG+TGG | - | chr8.4:11306692-11306711 | None:intergenic | 45.0% | |
| CCAAGTTTGGTCACAGAGAA+TGG | - | chr8.4:11304192-11304211 | None:intergenic | 45.0% | |
| CCACTCACTATTGGAACACT+TGG | + | chr8.4:11306689-11306708 | MS.gene030132:intron | 45.0% | |
| CCATTCTCTGTGACCAAACT+TGG | + | chr8.4:11304189-11304208 | MS.gene030132:CDS | 45.0% | |
| CGATGCAGAATCTTGAACCA+TGG | + | chr8.4:11305171-11305190 | MS.gene030132:intron | 45.0% | |
| CTCATCAAATGTGGGACTCT+TGG | - | chr8.4:11306544-11306563 | None:intergenic | 45.0% | |
| CTCCAGCTATCCCTAGAAAA+AGG | + | chr8.4:11305306-11305325 | MS.gene030132:CDS | 45.0% | |
| CTTTCTGCAGTTTCTCCCAA+AGG | - | chr8.4:11307245-11307264 | None:intergenic | 45.0% | |
| GAATCTACGACCAAACCACA+AGG | - | chr8.4:11304252-11304271 | None:intergenic | 45.0% | |
| GTCAGCACGATTAAAGTAGC+AGG | + | chr8.4:11305197-11305216 | MS.gene030132:CDS | 45.0% | |
| GTCATCTCCTGATAGGGATA+AGG | + | chr8.4:11306129-11306148 | MS.gene030132:CDS | 45.0% | |
| TACAGCCTCATATTGCATCC+AGG | - | chr8.4:11305399-11305418 | None:intergenic | 45.0% | |
| TCCACACTACAGCATTTGGT+GGG | - | chr8.4:11305596-11305615 | None:intergenic | 45.0% | |
| TCCTTTCACTGCCACATTGT+GGG | + | chr8.4:11305009-11305028 | MS.gene030132:CDS | 45.0% | |
| TCGCGAGATATGACATATCC+AGG | - | chr8.4:11306333-11306352 | None:intergenic | 45.0% | |
| TGTTAGCAGAACCATGAGCA+GGG | - | chr8.4:11304479-11304498 | None:intergenic | 45.0% | |
| TTGCTGTCCTTATCCCTATC+AGG | - | chr8.4:11306139-11306158 | None:intergenic | 45.0% | |
| ! | CAAAGGCATAACACCATCCT+TGG | - | chr8.4:11307228-11307247 | None:intergenic | 45.0% |
| ! | GGCCCGATCCAAATTTTAAG+AGG | + | chr8.4:11306847-11306866 | MS.gene030132:intron | 45.0% |
| ! | TCGGCGCTCAAAGTTATTTC+CGG | - | chr8.4:11305360-11305379 | None:intergenic | 45.0% |
| !! | AGCCTTTTTCTAGGGATAGC+TGG | - | chr8.4:11305311-11305330 | None:intergenic | 45.0% |
| !! | CAAGGATGGTGTTATGCCTT+TGG | + | chr8.4:11307226-11307245 | MS.gene030132:CDS | 45.0% |
| !! | TGGCCCAATGGGTTTTTGTT+AGG | - | chr8.4:11306672-11306691 | None:intergenic | 45.0% |
| !!! | CATGGACTAGTGATTTTGGG+TGG | + | chr8.4:11304436-11304455 | MS.gene030132:CDS | 45.0% |
| !!! | TGGACTAGTGATTTTGGGTG+GGG | + | chr8.4:11304438-11304457 | MS.gene030132:CDS | 45.0% |
| !!! | TGTGGCCGTTTTGTTGGTTT+TGG | - | chr8.4:11303928-11303947 | None:intergenic | 45.0% |
| !! | AATAGAAAAATAAAAATTTA+TGG | - | chr8.4:11306246-11306265 | None:intergenic | 5.0% |
| !! | ATAGAAAAATAAAAATTTAT+GGG | - | chr8.4:11306245-11306264 | None:intergenic | 5.0% |
| !! | TAAAAAATAAATAACAAATA+AGG | - | chr8.4:11305974-11305993 | None:intergenic | 5.0% |
| ACACACACACACACACACAG+AGG | - | chr8.4:11306188-11306207 | None:intergenic | 50.0% | |
| ACACTGATCGGCATCCCTAA+TGG | + | chr8.4:11304279-11304298 | MS.gene030132:CDS | 50.0% | |
| ACCCACAATGTGGCAGTGAA+AGG | - | chr8.4:11305013-11305032 | None:intergenic | 50.0% | |
| ACCCACCAAATGCTGTAGTG+TGG | + | chr8.4:11305592-11305611 | MS.gene030132:intron | 50.0% | |
| ACTGGATCTCCCTTGTGGTT+TGG | + | chr8.4:11304239-11304258 | MS.gene030132:CDS | 50.0% | |
| AGCTGGACAAGAGCTAGAAG+AGG | + | chr8.4:11304329-11304348 | MS.gene030132:CDS | 50.0% | |
| ATCACACTGGATCTCCCTTG+TGG | + | chr8.4:11304234-11304253 | MS.gene030132:CDS | 50.0% | |
| ATTCGTTGTCTTTGGCCACC+AGG | + | chr8.4:11306362-11306381 | MS.gene030132:CDS | 50.0% | |
| CAAGTGGTACATCAGTGACG+AGG | + | chr8.4:11306156-11306175 | MS.gene030132:CDS | 50.0% | |
| CACATGATACGTACCCACCA+TGG | + | chr8.4:11306298-11306317 | MS.gene030132:CDS | 50.0% | |
| CCAATAGTGAGTGGCCCAAT+GGG | - | chr8.4:11306683-11306702 | None:intergenic | 50.0% | |
| CCATCTGAAGGCCTCTTGTA+CGG | + | chr8.4:11306091-11306110 | MS.gene030132:CDS | 50.0% | |
| CTCAAAGGGAAGCCATCTGA+AGG | + | chr8.4:11306079-11306098 | MS.gene030132:CDS | 50.0% | |
| CTTCAGATGGCTTCCCTTTG+AGG | - | chr8.4:11306081-11306100 | None:intergenic | 50.0% | |
| GAGGTCCTGGATGCAATATG+AGG | + | chr8.4:11305391-11305410 | MS.gene030132:CDS | 50.0% | |
| GCTTTGCCCGAAATAGCTCA+AGG | + | chr8.4:11304063-11304082 | MS.gene030132:CDS | 50.0% | |
| GGTTCTGCTAACATCCGCAA+AGG | + | chr8.4:11304486-11304505 | MS.gene030132:CDS | 50.0% | |
| GTCCACACTACAGCATTTGG+TGG | - | chr8.4:11305597-11305616 | None:intergenic | 50.0% | |
| TACGCCCAAGACTGGACATA+TGG | - | chr8.4:11306723-11306742 | None:intergenic | 50.0% | |
| TCACTGCCACATTGTGGGTT+GGG | + | chr8.4:11305014-11305033 | MS.gene030132:CDS | 50.0% | |
| TCCAATAGTGAGTGGCCCAA+TGG | - | chr8.4:11306684-11306703 | None:intergenic | 50.0% | |
| TGGACGGAAGCTCAAGCATA+TGG | + | chr8.4:11305746-11305765 | MS.gene030132:CDS | 50.0% | |
| TTCACTGCCACATTGTGGGT+TGG | + | chr8.4:11305013-11305032 | MS.gene030132:CDS | 50.0% | |
| TTCTGACCCAACCCACAATG+TGG | - | chr8.4:11305023-11305042 | None:intergenic | 50.0% | |
| ! | GAAGTGCTTTCCAGCCTCAA+AGG | + | chr8.4:11306064-11306083 | MS.gene030132:CDS | 50.0% |
| !! | ACATTGTGGGTTGGGTCAGA+AGG | + | chr8.4:11305022-11305041 | MS.gene030132:CDS | 50.0% |
| !! | GGACTAGTGATTTTGGGTGG+GGG | + | chr8.4:11304439-11304458 | MS.gene030132:CDS | 50.0% |
| !! | TGATTTTGGGTGGGGGAAAG+AGG | + | chr8.4:11304446-11304465 | MS.gene030132:CDS | 50.0% |
| AGGACCTCCTCAGAGCCATT+CGG | - | chr8.4:11305379-11305398 | None:intergenic | 55.0% | |
| CCCATTGGGCCACTCACTAT+TGG | + | chr8.4:11306680-11306699 | MS.gene030132:intron | 55.0% | |
| CCGTACAAGAGGCCTTCAGA+TGG | - | chr8.4:11306094-11306113 | None:intergenic | 55.0% | |
| GAGGAAAGATGCCCTGCTCA+TGG | + | chr8.4:11304465-11304484 | MS.gene030132:CDS | 55.0% | |
| TAGGGATAGCTGGAGCCTTC+AGG | - | chr8.4:11305301-11305320 | None:intergenic | 55.0% | |
| TATCCAGGACCATGTGCCCA+TGG | - | chr8.4:11306318-11306337 | None:intergenic | 55.0% | |
| TGGGGGCAGTTCTCACCTTA+CGG | + | chr8.4:11306805-11306824 | MS.gene030132:intron | 55.0% | |
| !! | AGATGGCTTCCCTTTGAGGC+TGG | - | chr8.4:11306077-11306096 | None:intergenic | 55.0% |
| ACGTACCCACCATGGGCACA+TGG | + | chr8.4:11306306-11306325 | MS.gene030132:CDS | 60.0% | |
| CAGGACCATGTGCCCATGGT+GGG | - | chr8.4:11306314-11306333 | None:intergenic | 60.0% | |
| !! | GAATGGCTCTGAGGAGGTCC+TGG | + | chr8.4:11305378-11305397 | MS.gene030132:CDS | 60.0% |
| !! | TTGAGCGCCGAATGGCTCTG+AGG | + | chr8.4:11305369-11305388 | MS.gene030132:CDS | 60.0% |
| CCACCATGGGCACATGGTCC+TGG | + | chr8.4:11306312-11306331 | MS.gene030132:CDS | 65.0% | |
| CCAGGACCATGTGCCCATGG+TGG | - | chr8.4:11306315-11306334 | None:intergenic | 65.0% | |
| !! | AGCGCCGAATGGCTCTGAGG+AGG | + | chr8.4:11305372-11305391 | MS.gene030132:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 11303715 | 11307290 | 11303715 | ID=MS.gene030132 |
| chr8.4 | mRNA | 11303715 | 11307290 | 11303715 | ID=MS.gene030132.t1;Parent=MS.gene030132 |
| chr8.4 | exon | 11303715 | 11304507 | 11303715 | ID=MS.gene030132.t1.exon1;Parent=MS.gene030132.t1 |
| chr8.4 | CDS | 11303715 | 11304507 | 11303715 | ID=cds.MS.gene030132.t1;Parent=MS.gene030132.t1 |
| chr8.4 | exon | 11304861 | 11305096 | 11304861 | ID=MS.gene030132.t1.exon2;Parent=MS.gene030132.t1 |
| chr8.4 | CDS | 11304861 | 11305096 | 11304861 | ID=cds.MS.gene030132.t1;Parent=MS.gene030132.t1 |
| chr8.4 | exon | 11305179 | 11305457 | 11305179 | ID=MS.gene030132.t1.exon3;Parent=MS.gene030132.t1 |
| chr8.4 | CDS | 11305179 | 11305457 | 11305179 | ID=cds.MS.gene030132.t1;Parent=MS.gene030132.t1 |
| chr8.4 | exon | 11305716 | 11305844 | 11305716 | ID=MS.gene030132.t1.exon4;Parent=MS.gene030132.t1 |
| chr8.4 | CDS | 11305716 | 11305844 | 11305716 | ID=cds.MS.gene030132.t1;Parent=MS.gene030132.t1 |
| chr8.4 | exon | 11306001 | 11306177 | 11306001 | ID=MS.gene030132.t1.exon5;Parent=MS.gene030132.t1 |
| chr8.4 | CDS | 11306001 | 11306177 | 11306001 | ID=cds.MS.gene030132.t1;Parent=MS.gene030132.t1 |
| chr8.4 | exon | 11306291 | 11306398 | 11306291 | ID=MS.gene030132.t1.exon6;Parent=MS.gene030132.t1 |
| chr8.4 | CDS | 11306291 | 11306398 | 11306291 | ID=cds.MS.gene030132.t1;Parent=MS.gene030132.t1 |
| chr8.4 | exon | 11307084 | 11307290 | 11307084 | ID=MS.gene030132.t1.exon7;Parent=MS.gene030132.t1 |
| chr8.4 | CDS | 11307084 | 11307290 | 11307084 | ID=cds.MS.gene030132.t1;Parent=MS.gene030132.t1 |
| Gene Sequence |
| Protein sequence |
