Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030384.t1 | XP_013447041.1 | 98.9 | 536 | 6 | 0 | 1 | 536 | 1 | 536 | 0.00E+00 | 1085.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030384.t1 | O66601 | 53.2 | 524 | 226 | 8 | 13 | 536 | 6 | 510 | 1.3e-152 | 541.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030384.t1 | A0A072TW15 | 98.9 | 536 | 6 | 0 | 1 | 536 | 1 | 536 | 0.0e+00 | 1085.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene030384 | MS.gene85452 | PPI |
| MS.gene030384 | MS.gene058668 | PPI |
| MS.gene030384 | MS.gene035805 | PPI |
| MS.gene030384 | MS.gene064542 | PPI |
| MS.gene030384 | MS.gene36640 | PPI |
| MS.gene030384 | MS.gene023974 | PPI |
| MS.gene030384 | MS.gene73119 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030384.t1 | MTR_8g098325 | 98.881 | 536 | 6 | 0 | 1 | 536 | 1 | 536 | 0.0 | 1095 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030384.t1 | AT1G63660 | 79.962 | 529 | 106 | 0 | 8 | 536 | 6 | 534 | 0.0 | 898 |
| MS.gene030384.t1 | AT1G63660 | 77.156 | 429 | 98 | 0 | 8 | 436 | 6 | 434 | 0.0 | 706 |
Find 158 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTTCTTACAAAGCTTAA+AGG | 0.212229 | 4.4:+6053965 | MS.gene030384:CDS |
| TGTATAAAGGTACGTCAATT+AGG | 0.224273 | 4.4:+6054374 | MS.gene030384:intron |
| TGGTCTTGCAGTTAGAGTTC+TGG | 0.234935 | 4.4:+6054451 | MS.gene030384:CDS |
| TCCCCGACGGCTTTCTTCAA+TGG | 0.264395 | 4.4:+6052986 | MS.gene030384:CDS |
| CTTTAAGCTTTGTAAGAAAT+TGG | 0.278879 | 4.4:-6053964 | None:intergenic |
| CAGACCTTCTTACTTGGTTC+AGG | 0.287543 | 4.4:+6054084 | MS.gene030384:CDS |
| CATGTCATTTGTGCCTTATC+TGG | 0.306235 | 4.4:+6053678 | MS.gene030384:CDS |
| GAAGCTGTTACTCTTCCTTC+TGG | 0.306647 | 4.4:+6053204 | MS.gene030384:CDS |
| CCCCGACGGCTTTCTTCAAT+GGG | 0.310713 | 4.4:+6052987 | MS.gene030384:CDS |
| CCCAATGGCTTTATGAACTA+TGG | 0.316965 | 4.4:-6053727 | None:intergenic |
| CTGGCCTTTATGACGTAATA+TGG | 0.320042 | 4.4:+6054637 | MS.gene030384:CDS |
| TTGGACATAATCAGATTGTT+TGG | 0.324863 | 4.4:+6053166 | MS.gene030384:CDS |
| TTGCTGTGTCTATAGGTATA+AGG | 0.328120 | 4.4:+6053871 | MS.gene030384:intron |
| ATACTGAAGACCATAAAATT+TGG | 0.353194 | 4.4:-6053286 | None:intergenic |
| GAAGTAAAGAGGAAAATTAT+TGG | 0.356749 | 4.4:+6054001 | MS.gene030384:CDS |
| GGTCTTGCAGTTAGAGTTCT+GGG | 0.357052 | 4.4:+6054452 | MS.gene030384:CDS |
| GTATGGCCGGATGGAAATTA+AGG | 0.366637 | 4.4:+6053107 | MS.gene030384:CDS |
| GTCGGGGAAGGAAGGGGAAT+CGG | 0.371614 | 4.4:-6052971 | None:intergenic |
| AGTTTCAATTTCATATCCTT+TGG | 0.386250 | 4.4:-6054205 | None:intergenic |
| GTTGGAAACACGCAGGAGTA+TGG | 0.395537 | 4.4:+6053090 | MS.gene030384:CDS |
| TCCAATGCAGTTCCTGTTCT+CGG | 0.396120 | 4.4:+6053015 | MS.gene030384:CDS |
| GAGAGAAAACGGAGAGGCTT+CGG | 0.409425 | 4.4:-6052855 | None:intergenic |
| GGCTCTTGATGGTATGGGAA+TGG | 0.412411 | 4.4:-6054162 | None:intergenic |
| GACATTATGATGGCTCTTGA+TGG | 0.415267 | 4.4:-6054173 | None:intergenic |
| TACCTGTCGGAGAACATCTA+AGG | 0.416589 | 4.4:-6054495 | None:intergenic |
| GCTCTTGATGGTATGGGAAT+GGG | 0.417699 | 4.4:-6054161 | None:intergenic |
| TCGGGGAAGGAAGGGGAATC+GGG | 0.419706 | 4.4:-6052970 | None:intergenic |
| TTCTTACCAGTAAGATCTGT+TGG | 0.422935 | 4.4:+6054675 | MS.gene030384:CDS |
| TGAACTCCAACAGATCTTAC+TGG | 0.423500 | 4.4:-6054681 | None:intergenic |
| GTAAGATCTGTTGGAGTTCA+AGG | 0.429733 | 4.4:+6054684 | MS.gene030384:CDS |
| GCACAAATGACATGCTCATC+AGG | 0.431096 | 4.4:-6053669 | None:intergenic |
| GGGCATGATTCAATCACATC+AGG | 0.436861 | 4.4:-6054118 | None:intergenic |
| CCATAGTTCATAAAGCCATT+GGG | 0.440199 | 4.4:+6053727 | MS.gene030384:CDS |
| GTATAAAGGTACGTCAATTA+GGG | 0.444870 | 4.4:+6054375 | MS.gene030384:intron |
| GTGGAAGATGGAGGATGTGT+TGG | 0.444993 | 4.4:+6053611 | MS.gene030384:CDS |
| CGTCATCCCTTCCCTGGGCC+TGG | 0.447113 | 4.4:+6054431 | MS.gene030384:CDS |
| TGGAAGCAGACCTTCTTACT+TGG | 0.447736 | 4.4:+6054078 | MS.gene030384:CDS |
| GATGTTTGTGGGATTTCAGC+AGG | 0.450199 | 4.4:+6053588 | MS.gene030384:CDS |
| GACTCATACGCCGGAGGGAA+TGG | 0.454303 | 4.4:+6053542 | MS.gene030384:CDS |
| CAAAAGCTAGAAAAGGAACT+TGG | 0.456695 | 4.4:+6054058 | MS.gene030384:CDS |
| CTAAAACGTCATCCCTTCCC+TGG | 0.460144 | 4.4:+6054425 | MS.gene030384:CDS |
| TCCTTCTGGTTTCAATGTCG+TGG | 0.462035 | 4.4:+6053218 | MS.gene030384:CDS |
| CCCTCCCTCGTCATTCTCTC+CGG | 0.466714 | 4.4:+6052925 | MS.gene030384:CDS |
| TATGATGGCTCTTGATGGTA+TGG | 0.468360 | 4.4:-6054168 | None:intergenic |
| CGAAGTCGAGGATGAGAACT+AGG | 0.468903 | 4.4:-6052798 | None:intergenic |
| TCCTTGAAAAGTAGTTTAAG+TGG | 0.473279 | 4.4:-6054235 | None:intergenic |
| AATCGGGAGTGTGAACGGAG+TGG | 0.473517 | 4.4:-6052954 | None:intergenic |
| TTGTTGACAATGGCTTGCTC+AGG | 0.477269 | 4.4:+6053769 | MS.gene030384:CDS |
| ATCGGGAGTGTGAACGGAGT+GGG | 0.478020 | 4.4:-6052953 | None:intergenic |
| AGACCTTCTTACTTGGTTCA+GGG | 0.478848 | 4.4:+6054085 | MS.gene030384:CDS |
| CTTGCCATATTACGTCATAA+AGG | 0.478901 | 4.4:-6054641 | None:intergenic |
| TTATGTCCAACTTTCTCAGC+AGG | 0.480136 | 4.4:-6053153 | None:intergenic |
| ACCATAGTTCATAAAGCCAT+TGG | 0.482152 | 4.4:+6053726 | MS.gene030384:CDS |
| GCAGCATCAACACACTCAAC+TGG | 0.486387 | 4.4:-6053938 | None:intergenic |
| TTCAGTGTTTCCATTCCCTC+CGG | 0.487027 | 4.4:-6053552 | None:intergenic |
| CAGCTTCTTGTTAGCCGTCT+CGG | 0.488371 | 4.4:+6053054 | MS.gene030384:CDS |
| TGTGATGGAAACCTTTAAAA+CGG | 0.496167 | 4.4:+6053904 | MS.gene030384:CDS |
| AAACGGAGAGGCTTCGGATA+CGG | 0.496736 | 4.4:-6052849 | None:intergenic |
| CCGTAGCAGATACCGAGAAC+AGG | 0.498393 | 4.4:-6053027 | None:intergenic |
| TTTGGACCTTAATTTCCATC+CGG | 0.502860 | 4.4:-6053113 | None:intergenic |
| GCCCATTGAAGAAAGCCGTC+GGG | 0.506662 | 4.4:-6052988 | None:intergenic |
| GAAAGCCGTCGGGGAAGGAA+GGG | 0.507848 | 4.4:-6052978 | None:intergenic |
| GATTTCAGCAGGGTGGAAGA+TGG | 0.508686 | 4.4:+6053599 | MS.gene030384:CDS |
| GTTGAGGCAGAGAGAGAAAA+CGG | 0.509193 | 4.4:-6052866 | None:intergenic |
| TGTCTATAGGTATAAGGAGC+AGG | 0.509880 | 4.4:+6053877 | MS.gene030384:intron |
| GGAATCAACACCACCAGATA+AGG | 0.510348 | 4.4:-6053691 | None:intergenic |
| GAAGATGGAGGATGTGTTGG+AGG | 0.511074 | 4.4:+6053614 | MS.gene030384:CDS |
| GAAGACCACCGACATTATGA+TGG | 0.513566 | 4.4:-6054183 | None:intergenic |
| TCATGCCCACCACCTGGAAG+TGG | 0.514563 | 4.4:+6054133 | MS.gene030384:CDS |
| CATTCCATCTTGACTTGTCA+CGG | 0.515702 | 4.4:-6054745 | None:intergenic |
| TTCAATCACATCAGGGTACA+AGG | 0.515784 | 4.4:-6054110 | None:intergenic |
| AGGGGAATCGGGAGTGTGAA+CGG | 0.516292 | 4.4:-6052959 | None:intergenic |
| GTGAACGGAGTGGGGACCAC+CGG | 0.517539 | 4.4:-6052944 | None:intergenic |
| AAAGTGATTAATAATACAGT+GGG | 0.519092 | 4.4:+6053645 | MS.gene030384:CDS |
| TGGGAAGGTGACTCATACGC+CGG | 0.519837 | 4.4:+6053533 | MS.gene030384:intron |
| AAAGCCGTCGGGGAAGGAAG+GGG | 0.520124 | 4.4:-6052977 | None:intergenic |
| TATTCCCACTCAATTGTTGA+AGG | 0.524026 | 4.4:-6055441 | None:intergenic |
| ATTCAGTCAATCAAAGATGC+TGG | 0.527113 | 4.4:+6054618 | MS.gene030384:CDS |
| TGCCTTAGATGTTCTCCGAC+AGG | 0.531680 | 4.4:+6054493 | MS.gene030384:CDS |
| AGAAAGCCGTCGGGGAAGGA+AGG | 0.532276 | 4.4:-6052979 | None:intergenic |
| CCGGAGAGAATGACGAGGGA+GGG | 0.536699 | 4.4:-6052925 | None:intergenic |
| TAAGGAGCAGGAACGTGTGA+TGG | 0.541741 | 4.4:+6053889 | MS.gene030384:CDS |
| TGCAAGACCAGGCCCAGGGA+AGG | 0.542703 | 4.4:-6054438 | None:intergenic |
| TTCATAAAGCCATTGGGGAT+AGG | 0.544699 | 4.4:+6053733 | MS.gene030384:CDS |
| CGGCTCTGAGTGCAACAACA+TGG | 0.545340 | 4.4:-6054725 | None:intergenic |
| TAAAACGTCATCCCTTCCCT+GGG | 0.546430 | 4.4:+6054426 | MS.gene030384:CDS |
| GCAAGACCAGGCCCAGGGAA+GGG | 0.552040 | 4.4:-6054437 | None:intergenic |
| CGGAGAGAATGACGAGGGAG+GGG | 0.552242 | 4.4:-6052924 | None:intergenic |
| ACCGAGAACAGGAACTGCAT+TGG | 0.554925 | 4.4:-6053016 | None:intergenic |
| ACGTCAATTAGGGAGGATCA+TGG | 0.556420 | 4.4:+6054385 | MS.gene030384:CDS |
| GGAGGGGTTGAGTTCAGTGA+TGG | 0.557696 | 4.4:-6052908 | None:intergenic |
| TGACAGATCCTGAAGTAAAG+AGG | 0.559123 | 4.4:+6053990 | MS.gene030384:CDS |
| TTGAAGAAAGCCGTCGGGGA+AGG | 0.559604 | 4.4:-6052983 | None:intergenic |
| CCTGTTCTCGGTATCTGCTA+CGG | 0.560452 | 4.4:+6053027 | MS.gene030384:CDS |
| CTAGTTCTCATCCTCGACTT+CGG | 0.560880 | 4.4:+6052799 | MS.gene030384:CDS |
| CGCGAACTTCACCGCCGAGA+CGG | 0.560925 | 4.4:-6053068 | None:intergenic |
| ATTGAATCATGCCCACCACC+TGG | 0.563547 | 4.4:+6054127 | MS.gene030384:CDS |
| GTTTCACGCAAAATCTGTAA+TGG | 0.563756 | 4.4:+6055372 | MS.gene030384:CDS |
| CTAACTGCAAGACCAGGCCC+AGG | 0.566444 | 4.4:-6054443 | None:intergenic |
| GTTCCCTGAACCAAGTAAGA+AGG | 0.567722 | 4.4:-6054088 | None:intergenic |
| TCCCTCGTCATTCTCTCCGG+TGG | 0.567925 | 4.4:+6052928 | MS.gene030384:CDS |
| TCCCACTCAATTGTTGAAGG+AGG | 0.570083 | 4.4:-6055438 | None:intergenic |
| GGGGTTCTCGATGGCAGCGA+CGG | 0.572007 | 4.4:-6053259 | None:intergenic |
| GCCTCCTTCAACAATTGAGT+GGG | 0.574342 | 4.4:+6055437 | MS.gene030384:CDS |
| GAAACACGCAGGAGTATGGC+CGG | 0.577417 | 4.4:+6053094 | MS.gene030384:CDS |
| AGACCATAAAATTTGGCAGA+GGG | 0.578757 | 4.4:-6053279 | None:intergenic |
| CTCGGCGGTGAAGTTCGCGT+TGG | 0.580756 | 4.4:+6053072 | MS.gene030384:CDS |
| AAGATGGAATGACAGCAGAC+TGG | 0.581634 | 4.4:+6054757 | MS.gene030384:CDS |
| GGCTCTGAGTGCAACAACAT+GGG | 0.583042 | 4.4:-6054724 | None:intergenic |
| GAAGAGAAGAAGTGCCGTTG+AGG | 0.585102 | 4.4:-6052882 | None:intergenic |
| TCGGGAGTGTGAACGGAGTG+GGG | 0.587305 | 4.4:-6052952 | None:intergenic |
| AGCCCATTGAAGAAAGCCGT+CGG | 0.590042 | 4.4:-6052989 | None:intergenic |
| AGAACTCTAACTGCAAGACC+AGG | 0.590896 | 4.4:-6054449 | None:intergenic |
| CACGCAGGAGTATGGCCGGA+TGG | 0.594351 | 4.4:+6053098 | MS.gene030384:CDS |
| GTCATTTGTGCCTTATCTGG+TGG | 0.595067 | 4.4:+6053681 | MS.gene030384:CDS |
| ATGTTTGTGGGATTTCAGCA+GGG | 0.596794 | 4.4:+6053589 | MS.gene030384:CDS |
| CATGCCCACCACCTGGAAGT+GGG | 0.599206 | 4.4:+6054134 | MS.gene030384:CDS |
| TACTGGTAAGAAAACTGCAA+AGG | 0.601593 | 4.4:-6054664 | None:intergenic |
| ATCAAGAGCCATCATAATGT+CGG | 0.606367 | 4.4:+6054175 | MS.gene030384:CDS |
| TTTGGCAGAGGGGTTCTCGA+TGG | 0.608956 | 4.4:-6053268 | None:intergenic |
| AGCCTCCTTCAACAATTGAG+TGG | 0.609163 | 4.4:+6055436 | MS.gene030384:CDS |
| AACTATGGTAGCAGCAACAG+TGG | 0.609789 | 4.4:-6053712 | None:intergenic |
| GACCATAAAATTTGGCAGAG+GGG | 0.610716 | 4.4:-6053278 | None:intergenic |
| AGAGCCGTGACAAGTCAAGA+TGG | 0.616452 | 4.4:+6054741 | MS.gene030384:CDS |
| CATAGTTCATAAAGCCATTG+GGG | 0.618500 | 4.4:+6053728 | MS.gene030384:CDS |
| TGTATTGAGAACCGAAGTCG+AGG | 0.618773 | 4.4:-6052810 | None:intergenic |
| GTTCTGGGTGACGTGACTGA+AGG | 0.621656 | 4.4:+6054467 | MS.gene030384:CDS |
| TAATGTCGGTGGTCTTCCAA+AGG | 0.622152 | 4.4:+6054189 | MS.gene030384:CDS |
| AAGGTGACTCATACGCCGGA+GGG | 0.623263 | 4.4:+6053537 | MS.gene030384:intron |
| CAGATTGTTTGGATGAGTCA+TGG | 0.625708 | 4.4:+6053177 | MS.gene030384:CDS |
| CAAAGTGATTAATAATACAG+TGG | 0.630032 | 4.4:+6053644 | MS.gene030384:CDS |
| TTCGGATACGGCGAGTGATG+AGG | 0.631967 | 4.4:-6052837 | None:intergenic |
| GATTCCCCTTCCTTCCCCGA+CGG | 0.633487 | 4.4:+6052973 | MS.gene030384:CDS |
| TTCAGCAGGGTGGAAGATGG+AGG | 0.635225 | 4.4:+6053602 | MS.gene030384:CDS |
| ACAATGAAGCCTATCCCCAA+TGG | 0.636198 | 4.4:-6053742 | None:intergenic |
| ATGATGGCTCTTGATGGTAT+GGG | 0.637099 | 4.4:-6054167 | None:intergenic |
| CCCATTGAAGAAAGCCGTCG+GGG | 0.638613 | 4.4:-6052987 | None:intergenic |
| GTCGTGGCACGAAGTCAACA+AGG | 0.638723 | 4.4:+6053234 | MS.gene030384:CDS |
| AGGATCATGGATGTCCCTGA+GGG | 0.638998 | 4.4:+6054398 | MS.gene030384:CDS |
| GCCACGACATTGAAACCAGA+AGG | 0.640831 | 4.4:-6053219 | None:intergenic |
| ACCGGAGAGAATGACGAGGG+AGG | 0.643815 | 4.4:-6052926 | None:intergenic |
| AAGACCATAAAATTTGGCAG+AGG | 0.647998 | 4.4:-6053280 | None:intergenic |
| GCACAACACGATTCACACCA+CGG | 0.648587 | 4.4:-6055398 | None:intergenic |
| GGCATGATTCAATCACATCA+GGG | 0.655836 | 4.4:-6054117 | None:intergenic |
| TAAAGGTACGTCAATTAGGG+AGG | 0.658939 | 4.4:+6054378 | MS.gene030384:intron |
| AAGAGCCATCATAATGTCGG+TGG | 0.662337 | 4.4:+6054178 | MS.gene030384:CDS |
| GAAGGTGACTCATACGCCGG+AGG | 0.662543 | 4.4:+6053536 | MS.gene030384:intron |
| GAGGATCATGGATGTCCCTG+AGG | 0.671870 | 4.4:+6054397 | MS.gene030384:CDS |
| ACCACCGGAGAGAATGACGA+GGG | 0.673607 | 4.4:-6052929 | None:intergenic |
| TAACTGCAAGACCAGGCCCA+GGG | 0.675071 | 4.4:-6054442 | None:intergenic |
| TTTGTGGGATTTCAGCAGGG+TGG | 0.679722 | 4.4:+6053592 | MS.gene030384:CDS |
| AAAATCTGTAATGGTGTCCG+TGG | 0.698688 | 4.4:+6055381 | MS.gene030384:CDS |
| GGCAGAGAGAGAAAACGGAG+AGG | 0.709889 | 4.4:-6052861 | None:intergenic |
| GACCACCGGAGAGAATGACG+AGG | 0.712882 | 4.4:-6052930 | None:intergenic |
| AGTTCGCGTTGGAAACACGC+AGG | 0.714465 | 4.4:+6053083 | MS.gene030384:CDS |
| TGGTCTTCAGTATCACCCTG+AGG | 0.715570 | 4.4:+6053296 | MS.gene030384:CDS |
| CTTCTTGTTAGCCGTCTCGG+CGG | 0.726294 | 4.4:+6053057 | MS.gene030384:CDS |
| AAGTGATTAATAATACAGTG+GGG | 0.782696 | 4.4:+6053646 | MS.gene030384:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTCTTATTTCTTTTTTAAA+TGG | + | chr4.4:6054863-6054882 | MS.gene030384:intron | 10.0% |
| !! | AAATTGAATCAAAATATTGA+AGG | - | chr4.4:6054571-6054590 | None:intergenic | 15.0% |
| !! | TTTATTCATTGTAAAGATAT+TGG | + | chr4.4:6053808-6053827 | MS.gene030384:intron | 15.0% |
| !!! | AACCTTTAAAATTTCAAATA+CGG | + | chr4.4:6055263-6055282 | MS.gene030384:intron | 15.0% |
| !!! | ATTGTTATTTGTTCTTTTTT+GGG | + | chr4.4:6053514-6053533 | MS.gene030384:intron | 15.0% |
| !!! | TGATAGAACAAAATTTATTT+TGG | + | chr4.4:6054932-6054951 | MS.gene030384:intron | 15.0% |
| !! | AAAGTGATTAATAATACAGT+GGG | + | chr4.4:6053645-6053664 | MS.gene030384:CDS | 20.0% |
| !! | CTGTTAAAAAGAAAAAACTA+AGG | - | chr4.4:6055046-6055065 | None:intergenic | 20.0% |
| !! | GAAAACAAAATAAAGTTATG+CGG | - | chr4.4:6054847-6054866 | None:intergenic | 20.0% |
| !! | TAAAGATATTGGATTACAAA+CGG | + | chr4.4:6053819-6053838 | MS.gene030384:intron | 20.0% |
| !!! | AACTTGATAAAATGATAATG+TGG | - | chr4.4:6055124-6055143 | None:intergenic | 20.0% |
| !!! | ATTTTCATTTCCTTGTATAA+AGG | + | chr4.4:6054361-6054380 | MS.gene030384:intron | 20.0% |
| !!! | ATTTTCTATTTGATGTTTGT+GGG | + | chr4.4:6053577-6053596 | MS.gene030384:CDS | 20.0% |
| !!! | GATTGTTATTTGTTCTTTTT+TGG | + | chr4.4:6053513-6053532 | MS.gene030384:intron | 20.0% |
| !!! | TAAGGTATATTTTAGCTTTT+AGG | - | chr4.4:6055028-6055047 | None:intergenic | 20.0% |
| !!! | TGCTAGTTCATTTTAATAAT+TGG | + | chr4.4:6055228-6055247 | MS.gene030384:intron | 20.0% |
| ! | AAGTGATTAATAATACAGTG+GGG | + | chr4.4:6053646-6053665 | MS.gene030384:CDS | 25.0% |
| ! | AATCAAAATTAAACACAAGC+AGG | - | chr4.4:6053338-6053357 | None:intergenic | 25.0% |
| ! | AGGTATATTATTATACCTCA+GGG | - | chr4.4:6053314-6053333 | None:intergenic | 25.0% |
| ! | AGTTTCAATTTCATATCCTT+TGG | - | chr4.4:6054208-6054227 | None:intergenic | 25.0% |
| ! | ATACTGAAGACCATAAAATT+TGG | - | chr4.4:6053289-6053308 | None:intergenic | 25.0% |
| ! | CAAAGTGATTAATAATACAG+TGG | + | chr4.4:6053644-6053663 | MS.gene030384:CDS | 25.0% |
| ! | CAATTTCTTACAAAGCTTAA+AGG | + | chr4.4:6053965-6053984 | MS.gene030384:CDS | 25.0% |
| ! | CTATCAATCAATTATATCGA+TGG | - | chr4.4:6053451-6053470 | None:intergenic | 25.0% |
| ! | GAAGTAAAGAGGAAAATTAT+TGG | + | chr4.4:6054001-6054020 | MS.gene030384:CDS | 25.0% |
| ! | TAGGTATATTATTATACCTC+AGG | - | chr4.4:6053315-6053334 | None:intergenic | 25.0% |
| ! | TGTAATTTGAATTGAATTCC+AGG | + | chr4.4:6055319-6055338 | MS.gene030384:intron | 25.0% |
| ! | TTAAAATGAACTAGCATCAA+AGG | - | chr4.4:6055224-6055243 | None:intergenic | 25.0% |
| !! | ATAATTTTCCTCTTTACTTC+AGG | - | chr4.4:6054001-6054020 | None:intergenic | 25.0% |
| !! | CATTTTCTATTTGATGTTTG+TGG | + | chr4.4:6053576-6053595 | MS.gene030384:CDS | 25.0% |
| !! | CTTTAAGCTTTGTAAGAAAT+TGG | - | chr4.4:6053967-6053986 | None:intergenic | 25.0% |
| !! | GATTCAATTTTTCTTTTCTC+AGG | + | chr4.4:6054581-6054600 | MS.gene030384:intron | 25.0% |
| !! | TAAATGAAGATCCGTTTTAA+AGG | - | chr4.4:6053918-6053937 | None:intergenic | 25.0% |
| !!! | AGCCGTATTTGAAATTTTAA+AGG | - | chr4.4:6055268-6055287 | None:intergenic | 25.0% |
| !!! | ATATTTTAGCTTTTAGGACT+TGG | - | chr4.4:6055022-6055041 | None:intergenic | 25.0% |
| !!! | TATTTTAGCTTTTAGGACTT+GGG | - | chr4.4:6055021-6055040 | None:intergenic | 25.0% |
| !!! | TCTATCAAATAGTTTGCTAA+AGG | - | chr4.4:6054919-6054938 | None:intergenic | 25.0% |
| !!! | TTATTTGTTCTTTTTTGGGA+AGG | + | chr4.4:6053518-6053537 | MS.gene030384:intron | 25.0% |
| AAAATTAAACACAAGCAGGT+AGG | - | chr4.4:6053334-6053353 | None:intergenic | 30.0% | |
| AATGGTACCAAATTACCATT+AGG | + | chr4.4:6054881-6054900 | MS.gene030384:intron | 30.0% | |
| AATTGACGTACCTTTATACA+AGG | - | chr4.4:6054374-6054393 | None:intergenic | 30.0% | |
| ATCATCTTAATAGCACTTTG+CGG | + | chr4.4:6055292-6055311 | MS.gene030384:intron | 30.0% | |
| TCCTTGAAAAGTAGTTTAAG+TGG | - | chr4.4:6054238-6054257 | None:intergenic | 30.0% | |
| TTAACCTCCTAATGGTAATT+TGG | - | chr4.4:6054891-6054910 | None:intergenic | 30.0% | |
| TTGGAAATATATCAGCTTCT+GGG | + | chr4.4:6055184-6055203 | MS.gene030384:intron | 30.0% | |
| TTGGACATAATCAGATTGTT+TGG | + | chr4.4:6053166-6053185 | MS.gene030384:CDS | 30.0% | |
| TTTCAACTGAAGTATGCATA+TGG | + | chr4.4:6054785-6054804 | MS.gene030384:intron | 30.0% | |
| ! | AGGTCTGATTTTACTTGTTT+TGG | - | chr4.4:6052781-6052800 | None:intergenic | 30.0% |
| ! | GTATAAAGGTACGTCAATTA+GGG | + | chr4.4:6054375-6054394 | MS.gene030384:intron | 30.0% |
| ! | TGTATAAAGGTACGTCAATT+AGG | + | chr4.4:6054374-6054393 | MS.gene030384:intron | 30.0% |
| ! | TGTGATGGAAACCTTTAAAA+CGG | + | chr4.4:6053904-6053923 | MS.gene030384:CDS | 30.0% |
| ! | TTTTGCTCAAAAGCTAGAAA+AGG | + | chr4.4:6054051-6054070 | MS.gene030384:CDS | 30.0% |
| !! | CATTGTGTTTTTGTTGACAA+TGG | + | chr4.4:6053759-6053778 | MS.gene030384:CDS | 30.0% |
| !! | TAAACTACTTTTCAAGGATG+AGG | + | chr4.4:6054240-6054259 | MS.gene030384:CDS | 30.0% |
| AACGACCCTAGTATCTAATT+AGG | - | chr4.4:6055157-6055176 | None:intergenic | 35.0% | |
| AAGACCATAAAATTTGGCAG+AGG | - | chr4.4:6053283-6053302 | None:intergenic | 35.0% | |
| AATGAATAAACCGAGACTAG+TGG | - | chr4.4:6053798-6053817 | None:intergenic | 35.0% | |
| ACCATAGTTCATAAAGCCAT+TGG | + | chr4.4:6053726-6053745 | MS.gene030384:CDS | 35.0% | |
| ACGAGCCTAATTAGATACTA+GGG | + | chr4.4:6055149-6055168 | MS.gene030384:intron | 35.0% | |
| AGACCATAAAATTTGGCAGA+GGG | - | chr4.4:6053282-6053301 | None:intergenic | 35.0% | |
| ATCAAGAGCCATCATAATGT+CGG | + | chr4.4:6054175-6054194 | MS.gene030384:CDS | 35.0% | |
| ATTCAGTCAATCAAAGATGC+TGG | + | chr4.4:6054618-6054637 | MS.gene030384:CDS | 35.0% | |
| CAAAAGCTAGAAAAGGAACT+TGG | + | chr4.4:6054058-6054077 | MS.gene030384:CDS | 35.0% | |
| CAGAAGCTGATATATTTCCA+AGG | - | chr4.4:6055185-6055204 | None:intergenic | 35.0% | |
| CATAGTTCATAAAGCCATTG+GGG | + | chr4.4:6053728-6053747 | MS.gene030384:CDS | 35.0% | |
| CCATAGTTCATAAAGCCATT+GGG | + | chr4.4:6053727-6053746 | MS.gene030384:CDS | 35.0% | |
| CTTGCCATATTACGTCATAA+AGG | - | chr4.4:6054644-6054663 | None:intergenic | 35.0% | |
| CTTGGAAATATATCAGCTTC+TGG | + | chr4.4:6055183-6055202 | MS.gene030384:intron | 35.0% | |
| GTTTCACGCAAAATCTGTAA+TGG | + | chr4.4:6055372-6055391 | MS.gene030384:CDS | 35.0% | |
| TACTGGTAAGAAAACTGCAA+AGG | - | chr4.4:6054667-6054686 | None:intergenic | 35.0% | |
| TATTCCCACTCAATTGTTGA+AGG | - | chr4.4:6055444-6055463 | None:intergenic | 35.0% | |
| TTCTTACCAGTAAGATCTGT+TGG | + | chr4.4:6054675-6054694 | MS.gene030384:CDS | 35.0% | |
| TTGCTGTGTCTATAGGTATA+AGG | + | chr4.4:6053871-6053890 | MS.gene030384:intron | 35.0% | |
| TTTGGACCTTAATTTCCATC+CGG | - | chr4.4:6053116-6053135 | None:intergenic | 35.0% | |
| ! | ATGATGCTGGATAACTCTTT+TGG | + | chr4.4:6054810-6054829 | MS.gene030384:intron | 35.0% |
| ! | GATTTTGTTGCTGTGTCTAT+AGG | + | chr4.4:6053864-6053883 | MS.gene030384:intron | 35.0% |
| ! | TCTCTCACACAAGCTTTTAA+TGG | - | chr4.4:6054977-6054996 | None:intergenic | 35.0% |
| ! | TTTTGCGTGAAACATCATCA+AGG | - | chr4.4:6055365-6055384 | None:intergenic | 35.0% |
| !! | GCCACTTAAACTACTTTTCA+AGG | + | chr4.4:6054234-6054253 | MS.gene030384:CDS | 35.0% |
| AAAATCTGTAATGGTGTCCG+TGG | + | chr4.4:6055381-6055400 | MS.gene030384:CDS | 40.0% | |
| AGACCTTCTTACTTGGTTCA+GGG | + | chr4.4:6054085-6054104 | MS.gene030384:CDS | 40.0% | |
| AGGCACATTTAACCTCCTAA+TGG | - | chr4.4:6054899-6054918 | None:intergenic | 40.0% | |
| ATGTTTGTGGGATTTCAGCA+GGG | + | chr4.4:6053589-6053608 | MS.gene030384:CDS | 40.0% | |
| CACGAGCCTAATTAGATACT+AGG | + | chr4.4:6055148-6055167 | MS.gene030384:intron | 40.0% | |
| CAGATTGTTTGGATGAGTCA+TGG | + | chr4.4:6053177-6053196 | MS.gene030384:CDS | 40.0% | |
| GACATTATGATGGCTCTTGA+TGG | - | chr4.4:6054176-6054195 | None:intergenic | 40.0% | |
| GACCATAAAATTTGGCAGAG+GGG | - | chr4.4:6053281-6053300 | None:intergenic | 40.0% | |
| GGCATGATTCAATCACATCA+GGG | - | chr4.4:6054120-6054139 | None:intergenic | 40.0% | |
| GGTACCAAATTACCATTAGG+AGG | + | chr4.4:6054884-6054903 | MS.gene030384:intron | 40.0% | |
| GTAAGATCTGTTGGAGTTCA+AGG | + | chr4.4:6054684-6054703 | MS.gene030384:CDS | 40.0% | |
| TATGCATATGGCTATGATGC+TGG | + | chr4.4:6054797-6054816 | MS.gene030384:intron | 40.0% | |
| TGAACTCCAACAGATCTTAC+TGG | - | chr4.4:6054684-6054703 | None:intergenic | 40.0% | |
| TGACAGATCCTGAAGTAAAG+AGG | + | chr4.4:6053990-6054009 | MS.gene030384:CDS | 40.0% | |
| TGTCTATAGGTATAAGGAGC+AGG | + | chr4.4:6053877-6053896 | MS.gene030384:intron | 40.0% | |
| TTATGTCCAACTTTCTCAGC+AGG | - | chr4.4:6053156-6053175 | None:intergenic | 40.0% | |
| TTCAATCACATCAGGGTACA+AGG | - | chr4.4:6054113-6054132 | None:intergenic | 40.0% | |
| TTCATAAAGCCATTGGGGAT+AGG | + | chr4.4:6053733-6053752 | MS.gene030384:CDS | 40.0% | |
| ! | AACCCCTCTGCCAAATTTTA+TGG | + | chr4.4:6053276-6053295 | MS.gene030384:CDS | 40.0% |
| ! | ATGATGGCTCTTGATGGTAT+GGG | - | chr4.4:6054170-6054189 | None:intergenic | 40.0% |
| ! | CATGTCATTTGTGCCTTATC+TGG | + | chr4.4:6053678-6053697 | MS.gene030384:CDS | 40.0% |
| ! | CTGGCCTTTATGACGTAATA+TGG | + | chr4.4:6054637-6054656 | MS.gene030384:CDS | 40.0% |
| ! | CTTTTTCCTGCTGAGAAAGT+TGG | + | chr4.4:6053147-6053166 | MS.gene030384:CDS | 40.0% |
| ! | TAAAGGTACGTCAATTAGGG+AGG | + | chr4.4:6054378-6054397 | MS.gene030384:intron | 40.0% |
| ! | TATGATGGCTCTTGATGGTA+TGG | - | chr4.4:6054171-6054190 | None:intergenic | 40.0% |
| !! | CATTCCATCTTGACTTGTCA+CGG | - | chr4.4:6054748-6054767 | None:intergenic | 40.0% |
| !! | CCCAATGGCTTTATGAACTA+TGG | - | chr4.4:6053730-6053749 | None:intergenic | 40.0% |
| !!! | GACGTTTTAGAAATCCCTCA+GGG | - | chr4.4:6054415-6054434 | None:intergenic | 40.0% |
| !!! | TGACGTTTTAGAAATCCCTC+AGG | - | chr4.4:6054416-6054435 | None:intergenic | 40.0% |
| AACTATGGTAGCAGCAACAG+TGG | - | chr4.4:6053715-6053734 | None:intergenic | 45.0% | |
| AAGAGCCATCATAATGTCGG+TGG | + | chr4.4:6054178-6054197 | MS.gene030384:CDS | 45.0% | |
| AAGATGGAATGACAGCAGAC+TGG | + | chr4.4:6054757-6054776 | MS.gene030384:CDS | 45.0% | |
| ACAATGAAGCCTATCCCCAA+TGG | - | chr4.4:6053745-6053764 | None:intergenic | 45.0% | |
| ACGTCAATTAGGGAGGATCA+TGG | + | chr4.4:6054385-6054404 | MS.gene030384:CDS | 45.0% | |
| AGAACTCTAACTGCAAGACC+AGG | - | chr4.4:6054452-6054471 | None:intergenic | 45.0% | |
| AGCCTCCTTCAACAATTGAG+TGG | + | chr4.4:6055436-6055455 | MS.gene030384:CDS | 45.0% | |
| CAAAAGCTCCATGTACCTGT+CGG | - | chr4.4:6054511-6054530 | None:intergenic | 45.0% | |
| CAGACCTTCTTACTTGGTTC+AGG | + | chr4.4:6054084-6054103 | MS.gene030384:CDS | 45.0% | |
| CTTGTGCTCAAAGTAGTACC+TGG | - | chr4.4:6055340-6055359 | None:intergenic | 45.0% | |
| GAAGACCACCGACATTATGA+TGG | - | chr4.4:6054186-6054205 | None:intergenic | 45.0% | |
| GAAGCTGTTACTCTTCCTTC+TGG | + | chr4.4:6053204-6053223 | MS.gene030384:CDS | 45.0% | |
| GATGTTTGTGGGATTTCAGC+AGG | + | chr4.4:6053588-6053607 | MS.gene030384:CDS | 45.0% | |
| GCACAAATGACATGCTCATC+AGG | - | chr4.4:6053672-6053691 | None:intergenic | 45.0% | |
| GCCTCCTTCAACAATTGAGT+GGG | + | chr4.4:6055437-6055456 | MS.gene030384:CDS | 45.0% | |
| GGAATCAACACCACCAGATA+AGG | - | chr4.4:6053694-6053713 | None:intergenic | 45.0% | |
| GGGCATGATTCAATCACATC+AGG | - | chr4.4:6054121-6054140 | None:intergenic | 45.0% | |
| GGTCTTGCAGTTAGAGTTCT+GGG | + | chr4.4:6054452-6054471 | MS.gene030384:CDS | 45.0% | |
| GTATGGCCGGATGGAAATTA+AGG | + | chr4.4:6053107-6053126 | MS.gene030384:CDS | 45.0% | |
| GTCATTTGTGCCTTATCTGG+TGG | + | chr4.4:6053681-6053700 | MS.gene030384:CDS | 45.0% | |
| GTTCCCTGAACCAAGTAAGA+AGG | - | chr4.4:6054091-6054110 | None:intergenic | 45.0% | |
| GTTGAGGCAGAGAGAGAAAA+CGG | - | chr4.4:6052869-6052888 | None:intergenic | 45.0% | |
| TAAAACGTCATCCCTTCCCT+GGG | + | chr4.4:6054426-6054445 | MS.gene030384:CDS | 45.0% | |
| TAATGTCGGTGGTCTTCCAA+AGG | + | chr4.4:6054189-6054208 | MS.gene030384:CDS | 45.0% | |
| TACCTGTCGGAGAACATCTA+AGG | - | chr4.4:6054498-6054517 | None:intergenic | 45.0% | |
| TCCAATGCAGTTCCTGTTCT+CGG | + | chr4.4:6053015-6053034 | MS.gene030384:CDS | 45.0% | |
| TCCCACTCAATTGTTGAAGG+AGG | - | chr4.4:6055441-6055460 | None:intergenic | 45.0% | |
| TGGAAGCAGACCTTCTTACT+TGG | + | chr4.4:6054078-6054097 | MS.gene030384:CDS | 45.0% | |
| TGTATTGAGAACCGAAGTCG+AGG | - | chr4.4:6052813-6052832 | None:intergenic | 45.0% | |
| TTCAGTGTTTCCATTCCCTC+CGG | - | chr4.4:6053555-6053574 | None:intergenic | 45.0% | |
| ! | CTAGTTCTCATCCTCGACTT+CGG | + | chr4.4:6052799-6052818 | MS.gene030384:CDS | 45.0% |
| ! | GCTCTTGATGGTATGGGAAT+GGG | - | chr4.4:6054164-6054183 | None:intergenic | 45.0% |
| ! | GTTTTCTCTCTCTGCCTCAA+CGG | + | chr4.4:6052868-6052887 | MS.gene030384:CDS | 45.0% |
| ! | TGGTCTTGCAGTTAGAGTTC+TGG | + | chr4.4:6054451-6054470 | MS.gene030384:CDS | 45.0% |
| !! | TCCTTCTGGTTTCAATGTCG+TGG | + | chr4.4:6053218-6053237 | MS.gene030384:CDS | 45.0% |
| !! | TTGTTGACAATGGCTTGCTC+AGG | + | chr4.4:6053769-6053788 | MS.gene030384:CDS | 45.0% |
| !!! | GAAAAAGAGCAGAGGCGTTT+TGG | - | chr4.4:6053134-6053153 | None:intergenic | 45.0% |
| AAACGGAGAGGCTTCGGATA+CGG | - | chr4.4:6052852-6052871 | None:intergenic | 50.0% | |
| ACCGAGAACAGGAACTGCAT+TGG | - | chr4.4:6053019-6053038 | None:intergenic | 50.0% | |
| ACTAGGGTCGTTATGCTCCT+TGG | + | chr4.4:6055165-6055184 | MS.gene030384:intron | 50.0% | |
| AGAGCCGTGACAAGTCAAGA+TGG | + | chr4.4:6054741-6054760 | MS.gene030384:CDS | 50.0% | |
| AGCCCATTGAAGAAAGCCGT+CGG | - | chr4.4:6052992-6053011 | None:intergenic | 50.0% | |
| AGGATCATGGATGTCCCTGA+GGG | + | chr4.4:6054398-6054417 | MS.gene030384:CDS | 50.0% | |
| ATTGAATCATGCCCACCACC+TGG | + | chr4.4:6054127-6054146 | MS.gene030384:CDS | 50.0% | |
| CAGCTTCTTGTTAGCCGTCT+CGG | + | chr4.4:6053054-6053073 | MS.gene030384:CDS | 50.0% | |
| CCTGTTCTCGGTATCTGCTA+CGG | + | chr4.4:6053027-6053046 | MS.gene030384:CDS | 50.0% | |
| CGAAGTCGAGGATGAGAACT+AGG | - | chr4.4:6052801-6052820 | None:intergenic | 50.0% | |
| CTAAAACGTCATCCCTTCCC+TGG | + | chr4.4:6054425-6054444 | MS.gene030384:CDS | 50.0% | |
| CTCAGCAGGAAAAAGAGCAG+AGG | - | chr4.4:6053142-6053161 | None:intergenic | 50.0% | |
| GAAGATGGAGGATGTGTTGG+AGG | + | chr4.4:6053614-6053633 | MS.gene030384:CDS | 50.0% | |
| GAGAGAAAACGGAGAGGCTT+CGG | - | chr4.4:6052858-6052877 | None:intergenic | 50.0% | |
| GATGTTCTCCGACAGGTACA+TGG | + | chr4.4:6054500-6054519 | MS.gene030384:intron | 50.0% | |
| GATTTCAGCAGGGTGGAAGA+TGG | + | chr4.4:6053599-6053618 | MS.gene030384:CDS | 50.0% | |
| GCACAACACGATTCACACCA+CGG | - | chr4.4:6055401-6055420 | None:intergenic | 50.0% | |
| GCAGCATCAACACACTCAAC+TGG | - | chr4.4:6053941-6053960 | None:intergenic | 50.0% | |
| GCCACGACATTGAAACCAGA+AGG | - | chr4.4:6053222-6053241 | None:intergenic | 50.0% | |
| GTGGAAGATGGAGGATGTGT+TGG | + | chr4.4:6053611-6053630 | MS.gene030384:CDS | 50.0% | |
| GTTGGAAACACGCAGGAGTA+TGG | + | chr4.4:6053090-6053109 | MS.gene030384:CDS | 50.0% | |
| TAAGGAGCAGGAACGTGTGA+TGG | + | chr4.4:6053889-6053908 | MS.gene030384:CDS | 50.0% | |
| TAGGACTTGGGCAGATGTAC+AGG | - | chr4.4:6055009-6055028 | None:intergenic | 50.0% | |
| TGCCTTAGATGTTCTCCGAC+AGG | + | chr4.4:6054493-6054512 | MS.gene030384:CDS | 50.0% | |
| TGGTCTTCAGTATCACCCTG+AGG | + | chr4.4:6053296-6053315 | MS.gene030384:CDS | 50.0% | |
| TTTGTGGGATTTCAGCAGGG+TGG | + | chr4.4:6053592-6053611 | MS.gene030384:CDS | 50.0% | |
| ! | GGCTCTTGATGGTATGGGAA+TGG | - | chr4.4:6054165-6054184 | None:intergenic | 50.0% |
| ! | TTTTCCCACTTCCAGGTGGT+GGG | - | chr4.4:6054141-6054160 | None:intergenic | 50.0% |
| !! | GAAGAGAAGAAGTGCCGTTG+AGG | - | chr4.4:6052885-6052904 | None:intergenic | 50.0% |
| !! | GAATGGGTTTTCCCACTTCC+AGG | - | chr4.4:6054148-6054167 | None:intergenic | 50.0% |
| !! | GGCTCTGAGTGCAACAACAT+GGG | - | chr4.4:6054727-6054746 | None:intergenic | 50.0% |
| AAGGTGACTCATACGCCGGA+GGG | + | chr4.4:6053537-6053556 | MS.gene030384:intron | 55.0% | |
| ACCACCGGAGAGAATGACGA+GGG | - | chr4.4:6052932-6052951 | None:intergenic | 55.0% | |
| AGTTCGCGTTGGAAACACGC+AGG | + | chr4.4:6053083-6053102 | MS.gene030384:CDS | 55.0% | |
| CCCATTGAAGAAAGCCGTCG+GGG | - | chr4.4:6052990-6053009 | None:intergenic | 55.0% | |
| CCCCGACGGCTTTCTTCAAT+GGG | + | chr4.4:6052987-6053006 | MS.gene030384:CDS | 55.0% | |
| CCGTAGCAGATACCGAGAAC+AGG | - | chr4.4:6053030-6053049 | None:intergenic | 55.0% | |
| CTTCTTGTTAGCCGTCTCGG+CGG | + | chr4.4:6053057-6053076 | MS.gene030384:CDS | 55.0% | |
| GAGGATCATGGATGTCCCTG+AGG | + | chr4.4:6054397-6054416 | MS.gene030384:CDS | 55.0% | |
| GCCCATTGAAGAAAGCCGTC+GGG | - | chr4.4:6052991-6053010 | None:intergenic | 55.0% | |
| GGAGGGGTTGAGTTCAGTGA+TGG | - | chr4.4:6052911-6052930 | None:intergenic | 55.0% | |
| GGCAGAGAGAGAAAACGGAG+AGG | - | chr4.4:6052864-6052883 | None:intergenic | 55.0% | |
| GTCGTGGCACGAAGTCAACA+AGG | + | chr4.4:6053234-6053253 | MS.gene030384:CDS | 55.0% | |
| TAACTGCAAGACCAGGCCCA+GGG | - | chr4.4:6054445-6054464 | None:intergenic | 55.0% | |
| TCCCCGACGGCTTTCTTCAA+TGG | + | chr4.4:6052986-6053005 | MS.gene030384:CDS | 55.0% | |
| TGGGAAGGTGACTCATACGC+CGG | + | chr4.4:6053533-6053552 | MS.gene030384:intron | 55.0% | |
| TTCAGCAGGGTGGAAGATGG+AGG | + | chr4.4:6053602-6053621 | MS.gene030384:CDS | 55.0% | |
| TTCGGATACGGCGAGTGATG+AGG | - | chr4.4:6052840-6052859 | None:intergenic | 55.0% | |
| TTGAAGAAAGCCGTCGGGGA+AGG | - | chr4.4:6052986-6053005 | None:intergenic | 55.0% | |
| TTTGGCAGAGGGGTTCTCGA+TGG | - | chr4.4:6053271-6053290 | None:intergenic | 55.0% | |
| ! | AATCGGGAGTGTGAACGGAG+TGG | - | chr4.4:6052957-6052976 | None:intergenic | 55.0% |
| ! | AGGGGAATCGGGAGTGTGAA+CGG | - | chr4.4:6052962-6052981 | None:intergenic | 55.0% |
| ! | ATCGGGAGTGTGAACGGAGT+GGG | - | chr4.4:6052956-6052975 | None:intergenic | 55.0% |
| ! | GAAACACGCAGGAGTATGGC+CGG | + | chr4.4:6053094-6053113 | MS.gene030384:CDS | 55.0% |
| ! | GCTCAGGTGACCACTAGTCT+CGG | + | chr4.4:6053785-6053804 | MS.gene030384:intron | 55.0% |
| ! | GTTCTGGGTGACGTGACTGA+AGG | + | chr4.4:6054467-6054486 | MS.gene030384:CDS | 55.0% |
| ! | GTTTTCCCACTTCCAGGTGG+TGG | - | chr4.4:6054142-6054161 | None:intergenic | 55.0% |
| ! | TGGGTTTTCCCACTTCCAGG+TGG | - | chr4.4:6054145-6054164 | None:intergenic | 55.0% |
| !! | CGGCTCTGAGTGCAACAACA+TGG | - | chr4.4:6054728-6054747 | None:intergenic | 55.0% |
| AAAGCCGTCGGGGAAGGAAG+GGG | - | chr4.4:6052980-6052999 | None:intergenic | 60.0% | |
| ACCGGAGAGAATGACGAGGG+AGG | - | chr4.4:6052929-6052948 | None:intergenic | 60.0% | |
| AGAAAGCCGTCGGGGAAGGA+AGG | - | chr4.4:6052982-6053001 | None:intergenic | 60.0% | |
| CATGCCCACCACCTGGAAGT+GGG | + | chr4.4:6054134-6054153 | MS.gene030384:CDS | 60.0% | |
| CCCTCCCTCGTCATTCTCTC+CGG | + | chr4.4:6052925-6052944 | MS.gene030384:CDS | 60.0% | |
| CCGGAGAGAATGACGAGGGA+GGG | - | chr4.4:6052928-6052947 | None:intergenic | 60.0% | |
| CGGAGAGAATGACGAGGGAG+GGG | - | chr4.4:6052927-6052946 | None:intergenic | 60.0% | |
| CTAACTGCAAGACCAGGCCC+AGG | - | chr4.4:6054446-6054465 | None:intergenic | 60.0% | |
| GAAAGCCGTCGGGGAAGGAA+GGG | - | chr4.4:6052981-6053000 | None:intergenic | 60.0% | |
| GAAGGTGACTCATACGCCGG+AGG | + | chr4.4:6053536-6053555 | MS.gene030384:intron | 60.0% | |
| GACCACCGGAGAGAATGACG+AGG | - | chr4.4:6052933-6052952 | None:intergenic | 60.0% | |
| GACTCATACGCCGGAGGGAA+TGG | + | chr4.4:6053542-6053561 | MS.gene030384:CDS | 60.0% | |
| GATTCCCCTTCCTTCCCCGA+CGG | + | chr4.4:6052973-6052992 | MS.gene030384:CDS | 60.0% | |
| GTCGGGGAAGGAAGGGGAAT+CGG | - | chr4.4:6052974-6052993 | None:intergenic | 60.0% | |
| TCATGCCCACCACCTGGAAG+TGG | + | chr4.4:6054133-6054152 | MS.gene030384:CDS | 60.0% | |
| TCCCTCGTCATTCTCTCCGG+TGG | + | chr4.4:6052928-6052947 | MS.gene030384:CDS | 60.0% | |
| TCGGGGAAGGAAGGGGAATC+GGG | - | chr4.4:6052973-6052992 | None:intergenic | 60.0% | |
| ! | TCGGGAGTGTGAACGGAGTG+GGG | - | chr4.4:6052955-6052974 | None:intergenic | 60.0% |
| CGCGAACTTCACCGCCGAGA+CGG | - | chr4.4:6053071-6053090 | None:intergenic | 65.0% | |
| CTCGGCGGTGAAGTTCGCGT+TGG | + | chr4.4:6053072-6053091 | MS.gene030384:CDS | 65.0% | |
| GCAAGACCAGGCCCAGGGAA+GGG | - | chr4.4:6054440-6054459 | None:intergenic | 65.0% | |
| GGGGTTCTCGATGGCAGCGA+CGG | - | chr4.4:6053262-6053281 | None:intergenic | 65.0% | |
| GTGAACGGAGTGGGGACCAC+CGG | - | chr4.4:6052947-6052966 | None:intergenic | 65.0% | |
| TGCAAGACCAGGCCCAGGGA+AGG | - | chr4.4:6054441-6054460 | None:intergenic | 65.0% | |
| ! | CACGCAGGAGTATGGCCGGA+TGG | + | chr4.4:6053098-6053117 | MS.gene030384:CDS | 65.0% |
| CGTCATCCCTTCCCTGGGCC+TGG | + | chr4.4:6054431-6054450 | MS.gene030384:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 6052766 | 6055464 | 6052766 | ID=MS.gene030384 |
| chr4.4 | mRNA | 6052766 | 6055464 | 6052766 | ID=MS.gene030384.t1;Parent=MS.gene030384 |
| chr4.4 | exon | 6052766 | 6053317 | 6052766 | ID=MS.gene030384.t1.exon1;Parent=MS.gene030384.t1 |
| chr4.4 | CDS | 6052766 | 6053317 | 6052766 | ID=cds.MS.gene030384.t1;Parent=MS.gene030384.t1 |
| chr4.4 | exon | 6053540 | 6053790 | 6053540 | ID=MS.gene030384.t1.exon2;Parent=MS.gene030384.t1 |
| chr4.4 | CDS | 6053540 | 6053790 | 6053540 | ID=cds.MS.gene030384.t1;Parent=MS.gene030384.t1 |
| chr4.4 | exon | 6053886 | 6054261 | 6053886 | ID=MS.gene030384.t1.exon3;Parent=MS.gene030384.t1 |
| chr4.4 | CDS | 6053886 | 6054261 | 6053886 | ID=cds.MS.gene030384.t1;Parent=MS.gene030384.t1 |
| chr4.4 | exon | 6054383 | 6054514 | 6054383 | ID=MS.gene030384.t1.exon4;Parent=MS.gene030384.t1 |
| chr4.4 | CDS | 6054383 | 6054514 | 6054383 | ID=cds.MS.gene030384.t1;Parent=MS.gene030384.t1 |
| chr4.4 | exon | 6054603 | 6054778 | 6054603 | ID=MS.gene030384.t1.exon5;Parent=MS.gene030384.t1 |
| chr4.4 | CDS | 6054603 | 6054778 | 6054603 | ID=cds.MS.gene030384.t1;Parent=MS.gene030384.t1 |
| chr4.4 | exon | 6055341 | 6055464 | 6055341 | ID=MS.gene030384.t1.exon6;Parent=MS.gene030384.t1 |
| chr4.4 | CDS | 6055341 | 6055464 | 6055341 | ID=cds.MS.gene030384.t1;Parent=MS.gene030384.t1 |
| Gene Sequence |
| Protein sequence |
