Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030526.t1 | XP_003630450.1 | 98.1 | 540 | 10 | 0 | 255 | 794 | 1 | 540 | 3.80E-208 | 734.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030526.t1 | Q39817 | 85.9 | 481 | 65 | 2 | 255 | 732 | 1 | 481 | 4.8e-159 | 563.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030526.t1 | M4EKJ1 | 66.3 | 812 | 183 | 5 | 11 | 733 | 7 | 816 | 4.2e-217 | 764.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene030526 | MS.gene82400 | PPI |
| MS.gene030526 | MS.gene56457 | PPI |
| MS.gene030526 | MS.gene001347 | PPI |
| MS.gene030526 | MS.gene006869 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030526.t1 | MTR_8g095680 | 97.407 | 540 | 14 | 0 | 255 | 794 | 1 | 540 | 0.0 | 1067 |
| MS.gene030526.t1 | MTR_8g095680 | 97.619 | 252 | 6 | 0 | 1 | 252 | 1 | 252 | 4.57e-172 | 506 |
| MS.gene030526.t1 | MTR_3g098430 | 78.205 | 546 | 108 | 6 | 255 | 794 | 1 | 541 | 0.0 | 792 |
| MS.gene030526.t1 | MTR_3g098430 | 84.524 | 252 | 36 | 2 | 1 | 252 | 1 | 249 | 9.44e-145 | 436 |
| MS.gene030526.t1 | MTR_3g098430 | 77.455 | 550 | 110 | 6 | 255 | 794 | 1 | 546 | 0.0 | 786 |
| MS.gene030526.t1 | MTR_3g098430 | 84.524 | 252 | 36 | 2 | 1 | 252 | 1 | 249 | 1.39e-144 | 436 |
| MS.gene030526.t1 | MTR_1g083960 | 40.263 | 380 | 168 | 13 | 290 | 662 | 26 | 353 | 1.17e-57 | 203 |
| MS.gene030526.t1 | MTR_1g083960 | 40.090 | 222 | 112 | 8 | 36 | 250 | 26 | 233 | 3.16e-35 | 139 |
| MS.gene030526.t1 | MTR_4g068080 | 33.333 | 408 | 189 | 14 | 262 | 654 | 6 | 345 | 2.34e-57 | 202 |
| MS.gene030526.t1 | MTR_4g068080 | 30.233 | 258 | 135 | 10 | 8 | 250 | 6 | 233 | 5.02e-28 | 118 |
| MS.gene030526.t1 | MTR_7g080370 | 33.090 | 411 | 199 | 13 | 255 | 654 | 1 | 346 | 6.37e-57 | 201 |
| MS.gene030526.t1 | MTR_7g080370 | 31.154 | 260 | 147 | 9 | 1 | 252 | 1 | 236 | 7.37e-31 | 126 |
| MS.gene030526.t1 | MTR_7g080370 | 33.090 | 411 | 199 | 13 | 255 | 654 | 1 | 346 | 1.04e-56 | 200 |
| MS.gene030526.t1 | MTR_7g080370 | 31.154 | 260 | 147 | 9 | 1 | 252 | 1 | 236 | 1.12e-30 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030526.t1 | AT5G61790 | 73.446 | 531 | 134 | 3 | 265 | 794 | 6 | 530 | 0.0 | 784 |
| MS.gene030526.t1 | AT5G61790 | 75.620 | 242 | 57 | 1 | 11 | 252 | 6 | 245 | 1.11e-124 | 384 |
| MS.gene030526.t1 | AT5G07340 | 73.870 | 509 | 123 | 5 | 288 | 792 | 27 | 529 | 0.0 | 743 |
| MS.gene030526.t1 | AT5G07340 | 79.186 | 221 | 44 | 1 | 34 | 252 | 27 | 247 | 1.30e-118 | 369 |
| MS.gene030526.t1 | AT5G07340 | 74.111 | 506 | 121 | 5 | 291 | 792 | 38 | 537 | 0.0 | 741 |
| MS.gene030526.t1 | AT5G07340 | 79.817 | 218 | 42 | 1 | 37 | 252 | 38 | 255 | 1.15e-117 | 366 |
| MS.gene030526.t1 | AT1G09210 | 40.263 | 380 | 168 | 11 | 290 | 662 | 24 | 351 | 1.56e-58 | 206 |
| MS.gene030526.t1 | AT1G09210 | 41.441 | 222 | 109 | 7 | 36 | 250 | 24 | 231 | 3.64e-37 | 145 |
| MS.gene030526.t1 | AT1G56340 | 38.929 | 411 | 178 | 14 | 259 | 662 | 7 | 351 | 1.69e-58 | 205 |
| MS.gene030526.t1 | AT1G56340 | 38.340 | 253 | 121 | 9 | 5 | 250 | 7 | 231 | 3.80e-36 | 142 |
| MS.gene030526.t1 | AT1G56340 | 38.929 | 411 | 178 | 14 | 259 | 662 | 7 | 351 | 2.25e-58 | 205 |
| MS.gene030526.t1 | AT1G56340 | 38.340 | 253 | 121 | 9 | 5 | 250 | 7 | 231 | 4.63e-36 | 142 |
| MS.gene030526.t1 | AT1G08450 | 34.118 | 425 | 215 | 14 | 266 | 682 | 10 | 377 | 8.57e-57 | 201 |
| MS.gene030526.t1 | AT1G08450 | 33.065 | 248 | 139 | 10 | 12 | 251 | 10 | 238 | 8.50e-30 | 123 |
| MS.gene030526.t1 | AT1G08450 | 31.294 | 425 | 202 | 15 | 266 | 682 | 10 | 352 | 3.52e-43 | 162 |
| MS.gene030526.t1 | AT1G08450 | 33.065 | 248 | 139 | 10 | 12 | 251 | 10 | 238 | 5.77e-30 | 123 |
| MS.gene030526.t1 | AT1G08450 | 36.207 | 232 | 106 | 6 | 451 | 682 | 134 | 323 | 7.03e-27 | 113 |
Find 222 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGGGGCTGCTTCACAATT+TGG | 0.117242 | 4.2:-7780170 | None:intergenic |
| AATTGAAAATCCAGCTTATA+AGG | 0.199133 | 4.2:+7780259 | MS.gene030526:CDS |
| CAATTTGGGTTAGTAATCTT+AGG | 0.221903 | 4.2:-7780155 | None:intergenic |
| GGTTTCTTATCTTCAGGATC+TGG | 0.250300 | 4.2:-7775521 | None:intergenic |
| GGTTTCTTATCTTCAGGATC+TGG | 0.250300 | 4.2:-7779927 | None:intergenic |
| GTTTCATCGACAGGGGAATA+TGG | 0.254330 | 4.2:+7777582 | MS.gene030526:intron |
| CTCTTTCTCAATAGTAAACT+TGG | 0.257204 | 4.2:-7780465 | None:intergenic |
| AGTGAGGGGCATGAAGATTA+TGG | 0.263277 | 4.2:+7775029 | MS.gene030526:CDS |
| AGTGAGGGGCATGAAGATTA+TGG | 0.263277 | 4.2:+7779435 | MS.gene030526:CDS |
| ACCGTTATATTCATTCTTAT+CGG | 0.278275 | 4.2:-7773466 | None:intergenic |
| ACCGTTATATTCATTCTTAT+CGG | 0.278275 | 4.2:-7777872 | None:intergenic |
| TATGCTGGATTCTTCTTCAT+TGG | 0.285014 | 4.2:-7780212 | None:intergenic |
| TCCTCAGGTTTCTTATCTTC+AGG | 0.293756 | 4.2:-7775527 | None:intergenic |
| TCCTCAGGTTTCTTATCTTC+AGG | 0.293756 | 4.2:-7779933 | None:intergenic |
| CAGCTATCGGTATTGAGATT+TGG | 0.301537 | 4.2:+7780354 | MS.gene030526:CDS |
| TCTTCATCGTCCCAATCTTC+TGG | 0.309076 | 4.2:-7780113 | None:intergenic |
| TCTCCCTATTCTATCATGTT+TGG | 0.320919 | 4.2:+7775245 | MS.gene030526:CDS |
| TCTCCCTATTCTATCATGTT+TGG | 0.320919 | 4.2:+7779651 | MS.gene030526:CDS |
| ATCCAGCTTATAAGGGTATA+TGG | 0.323335 | 4.2:+7780267 | MS.gene030526:CDS |
| ATCCAGCATACAAGGGAAAA+TGG | 0.325180 | 4.2:+7780225 | MS.gene030526:CDS |
| CTCTCCACTGTCTTGGTTAG+TGG | 0.328971 | 4.2:-7781096 | None:intergenic |
| TTCTGTGCATTCTAGGCATC+TGG | 0.336994 | 4.2:+7774994 | MS.gene030526:intron |
| TTCTGTGCATTCTAGGCATC+TGG | 0.336994 | 4.2:+7779400 | MS.gene030526:intron |
| CAGGGGCTGCTTCACAATTT+GGG | 0.337351 | 4.2:-7780169 | None:intergenic |
| AGCTCAAAGTAATCAGGGTT+TGG | 0.338624 | 4.2:-7780305 | None:intergenic |
| TCAGGATCTGGGATTGTCTT+GGG | 0.366663 | 4.2:-7775509 | None:intergenic |
| TCAGGATCTGGGATTGTCTT+GGG | 0.366663 | 4.2:-7779915 | None:intergenic |
| GAAACAGAAGGAAGAAGAAA+AGG | 0.367207 | 4.2:+7780487 | MS.gene030526:CDS |
| AGAATCATTGTCAAATTCCT+TGG | 0.371466 | 4.2:-7775225 | None:intergenic |
| AGAATCATTGTCAAATTCCT+TGG | 0.371466 | 4.2:-7779631 | None:intergenic |
| CTTCATTCTCTCCACTGTCT+TGG | 0.379721 | 4.2:-7781103 | None:intergenic |
| AGCTGCAATAGGCTCAAAAT+CGG | 0.385593 | 4.2:-7780336 | None:intergenic |
| TGACGGGGAACAGAAGAAAA+AGG | 0.390374 | 4.2:+7775442 | MS.gene030526:CDS |
| TGACGGGGAACAGAAGAAAA+AGG | 0.390374 | 4.2:+7779848 | MS.gene030526:CDS |
| TTTGTGGCCCCACACTTGTC+AGG | 0.403994 | 4.2:-7775269 | None:intergenic |
| TTTGTGGCCCCACACTTGTC+AGG | 0.403994 | 4.2:-7779675 | None:intergenic |
| TCATCAGGCTTTACTGCACT+TGG | 0.405249 | 4.2:-7775578 | None:intergenic |
| AATTTGGGTTAGTAATCTTA+GGG | 0.406892 | 4.2:-7780154 | None:intergenic |
| TCATCAGGCTTTACTGCACT+TGG | 0.408900 | 4.2:-7779984 | None:intergenic |
| CAAAATTTGCAACTCATTGT+CGG | 0.409058 | 4.2:-7775417 | None:intergenic |
| CAAAATTTGCAACTCATTGT+CGG | 0.409058 | 4.2:-7779823 | None:intergenic |
| TTCAGGATCTGGGATTGTCT+TGG | 0.412629 | 4.2:-7775510 | None:intergenic |
| TTCAGGATCTGGGATTGTCT+TGG | 0.412629 | 4.2:-7779916 | None:intergenic |
| AAAATTTGCAACTCATTGTC+GGG | 0.414444 | 4.2:-7775416 | None:intergenic |
| AAAATTTGCAACTCATTGTC+GGG | 0.414444 | 4.2:-7779822 | None:intergenic |
| TCATAATCTAACCATCCTTC+AGG | 0.415291 | 4.2:-7780056 | None:intergenic |
| GTTTCTTATCTTCAGGATCT+GGG | 0.420391 | 4.2:-7775520 | None:intergenic |
| GTTTCTTATCTTCAGGATCT+GGG | 0.420391 | 4.2:-7779926 | None:intergenic |
| GGCTTTACTGCACTTGGGTC+GGG | 0.421849 | 4.2:-7775572 | None:intergenic |
| GGCTTTACTGCACTTGGGTC+GGG | 0.421849 | 4.2:-7779978 | None:intergenic |
| GAATCATTGTCAAATTCCTT+GGG | 0.434470 | 4.2:-7775224 | None:intergenic |
| GAATCATTGTCAAATTCCTT+GGG | 0.434470 | 4.2:-7779630 | None:intergenic |
| GATTGTCTTGGGAGGGATAA+GGG | 0.435368 | 4.2:-7775498 | None:intergenic |
| GATTGTCTTGGGAGGGATAA+GGG | 0.435368 | 4.2:-7779904 | None:intergenic |
| TGATGAGCCTGTGATTCTTA+AGG | 0.438519 | 4.2:+7775100 | MS.gene030526:CDS |
| TGATGAGCCTGTGATTCTTA+AGG | 0.438519 | 4.2:+7779506 | MS.gene030526:CDS |
| TCTCTCTCGTCCCAGTCCTC+AGG | 0.441848 | 4.2:-7775542 | None:intergenic |
| TCTCTCTCGTCCCAGTCCTC+AGG | 0.441848 | 4.2:-7779948 | None:intergenic |
| AGGACCAAACATGATAGAAT+AGG | 0.444316 | 4.2:-7775249 | None:intergenic |
| AGGACCAAACATGATAGAAT+AGG | 0.444316 | 4.2:-7779655 | None:intergenic |
| CGATGAAGAGGATGGTGAAT+GGG | 0.445046 | 4.2:+7780127 | MS.gene030526:CDS |
| CTGGTTGTGGTGAGTGGAAA+AGG | 0.445292 | 4.2:+7780189 | MS.gene030526:CDS |
| TTTGCAGGATCTCATTGAAA+AGG | 0.448014 | 4.2:+7780851 | MS.gene030526:intron |
| GTGAGGGGCATGAAGATTAT+GGG | 0.448284 | 4.2:+7775030 | MS.gene030526:CDS |
| GTGAGGGGCATGAAGATTAT+GGG | 0.448284 | 4.2:+7779436 | MS.gene030526:CDS |
| GCATCCTCATCCCAGTCATC+AGG | 0.452608 | 4.2:-7779999 | None:intergenic |
| TTCCTTCGTATCGTATTTGG+TGG | 0.456544 | 4.2:+7780939 | MS.gene030526:CDS |
| GGCTACAAAACCAGAAGATT+GGG | 0.458059 | 4.2:+7780103 | MS.gene030526:CDS |
| AGGCTACAAAACCAGAAGAT+TGG | 0.458247 | 4.2:+7780102 | MS.gene030526:CDS |
| ATTGAAAATCCAGCTTATAA+GGG | 0.458787 | 4.2:+7780260 | MS.gene030526:CDS |
| TCAATACCGATAGCTGCAAT+AGG | 0.462507 | 4.2:-7780347 | None:intergenic |
| GTGCAGTAAAGCCTGATGAC+TGG | 0.469031 | 4.2:+7779988 | MS.gene030526:CDS |
| ACGATGAAGAGGATGGTGAA+TGG | 0.471046 | 4.2:+7780126 | MS.gene030526:CDS |
| GAAGAAGAATCCAGCATACA+AGG | 0.471522 | 4.2:+7780217 | MS.gene030526:CDS |
| TTTCATCGACAGGGGAATAT+GGG | 0.471974 | 4.2:+7777583 | MS.gene030526:intron |
| GGCAAATTTCTTATCTTCTG+AGG | 0.473999 | 4.2:+7775463 | MS.gene030526:CDS |
| GGCAAATTTCTTATCTTCTG+AGG | 0.473999 | 4.2:+7779869 | MS.gene030526:CDS |
| GTCTCTTGTGCAGGCAAGAG+TGG | 0.475290 | 4.2:+7781043 | MS.gene030526:intron |
| GGATTGTCTTGGGAGGGATA+AGG | 0.478867 | 4.2:-7775499 | None:intergenic |
| GGATTGTCTTGGGAGGGATA+AGG | 0.478867 | 4.2:-7779905 | None:intergenic |
| TCAACATACTCCCCACTCTT+CGG | 0.479318 | 4.2:-7775323 | None:intergenic |
| TCAACATACTCCCCACTCTT+CGG | 0.479318 | 4.2:-7779729 | None:intergenic |
| ATAAGATTGCCGCGTCATAC+CGG | 0.480655 | 4.2:+7780426 | MS.gene030526:CDS |
| AGCTTGTCAGAGGGAACAGA+TGG | 0.491925 | 4.2:-7775365 | None:intergenic |
| AGCTTGTCAGAGGGAACAGA+TGG | 0.491925 | 4.2:-7779771 | None:intergenic |
| CGTCATACCGGGAGACTACA+TGG | 0.492103 | 4.2:+7780438 | MS.gene030526:CDS |
| AATGAAGTGCACCTTGTTTG+TGG | 0.492594 | 4.2:-7775285 | None:intergenic |
| AATGAAGTGCACCTTGTTTG+TGG | 0.492594 | 4.2:-7779691 | None:intergenic |
| TACCGCGTCATCGGCATCAT+CGG | 0.497082 | 4.2:-7773283 | None:intergenic |
| TACCGCGTCATCGGCATCAT+CGG | 0.497082 | 4.2:-7777689 | None:intergenic |
| TCTGGGTCATCTATCTCCTC+AGG | 0.498032 | 4.2:-7780080 | None:intergenic |
| GAACGAAAGCGAATTCATCT+TGG | 0.499873 | 4.2:+7773201 | MS.gene030526:CDS |
| GAACGAAAGCGAATTCATCT+TGG | 0.499873 | 4.2:+7777607 | MS.gene030526:CDS |
| CTGGGATGAGGATGCACCCT+TGG | 0.500943 | 4.2:+7780007 | MS.gene030526:CDS |
| TTCCATATACCCTTATAAGC+TGG | 0.501975 | 4.2:-7780269 | None:intergenic |
| TTGCAGGATCTCATTGAAAA+GGG | 0.502190 | 4.2:+7780852 | MS.gene030526:intron |
| AGAATTCCAACTGTGAGATT+CGG | 0.503519 | 4.2:-7780885 | None:intergenic |
| AAGATGAATTACCGCGTCAT+CGG | 0.505451 | 4.2:-7773292 | None:intergenic |
| AAGATGAATTACCGCGTCAT+CGG | 0.505451 | 4.2:-7777698 | None:intergenic |
| TTCTTCATCAAGAATTTCCA+AGG | 0.505747 | 4.2:-7780024 | None:intergenic |
| TAAGATTGCCGCGTCATACC+GGG | 0.509139 | 4.2:+7780427 | MS.gene030526:CDS |
| AGGCTTTACTGCACTTGGGT+CGG | 0.517691 | 4.2:-7775573 | None:intergenic |
| AGGCTTTACTGCACTTGGGT+CGG | 0.517691 | 4.2:-7779979 | None:intergenic |
| AAGATAAGAAACCTGAGGAC+TGG | 0.518095 | 4.2:+7775531 | MS.gene030526:CDS |
| AAGATAAGAAACCTGAGGAC+TGG | 0.518095 | 4.2:+7779937 | MS.gene030526:CDS |
| TTTGAGCCTATTGCAGCTAT+CGG | 0.519883 | 4.2:+7780341 | MS.gene030526:CDS |
| TCTTTCTCAATAGTAAACTT+GGG | 0.520577 | 4.2:-7780464 | None:intergenic |
| GGACCAAACATGATAGAATA+GGG | 0.520952 | 4.2:-7775248 | None:intergenic |
| GGACCAAACATGATAGAATA+GGG | 0.520952 | 4.2:-7779654 | None:intergenic |
| ATAAGGGTATATGGAAGCCT+CGG | 0.523060 | 4.2:+7780276 | MS.gene030526:CDS |
| GATATGCACCACCACATTCG+AGG | 0.524176 | 4.2:-7775166 | None:intergenic |
| GATATGCACCACCACATTCG+AGG | 0.524176 | 4.2:-7779572 | None:intergenic |
| AAGCTTGTAGGCACTCAGGA+AGG | 0.524251 | 4.2:-7780721 | None:intergenic |
| TATTGAGATTTGGACAATGC+AGG | 0.530334 | 4.2:+7780364 | MS.gene030526:CDS |
| TGTGAAGCAGCCCCTGGTTG+TGG | 0.538010 | 4.2:+7780176 | MS.gene030526:CDS |
| TAAGGGTATATGGAAGCCTC+GGG | 0.538372 | 4.2:+7780277 | MS.gene030526:CDS |
| TTAGTGGAAGTTTCTGCGGC+GGG | 0.539110 | 4.2:-7781080 | None:intergenic |
| TCCGATAAGAATGAATATAA+CGG | 0.541713 | 4.2:+7773465 | MS.gene030526:CDS |
| TCCGATAAGAATGAATATAA+CGG | 0.541713 | 4.2:+7777871 | MS.gene030526:CDS |
| TTTGAGACTCGCCTTCAGAA+TGG | 0.542633 | 4.2:+7775143 | MS.gene030526:CDS |
| TTTGAGACTCGCCTTCAGAA+TGG | 0.542633 | 4.2:+7779549 | MS.gene030526:CDS |
| TGTTTGGTCCTGACAAGTGT+GGG | 0.544403 | 4.2:+7775261 | MS.gene030526:CDS |
| TGTTTGGTCCTGACAAGTGT+GGG | 0.544403 | 4.2:+7779667 | MS.gene030526:CDS |
| GATTGGGACGATGAAGAGGA+TGG | 0.545919 | 4.2:+7780119 | MS.gene030526:CDS |
| GATTCATCCTTAAGAATCAC+AGG | 0.546646 | 4.2:-7775107 | None:intergenic |
| GATTCATCCTTAAGAATCAC+AGG | 0.546646 | 4.2:-7779513 | None:intergenic |
| GAATGAAGAAAACAAAGAGG+AGG | 0.550444 | 4.2:+7781118 | MS.gene030526:CDS |
| CCAAATTGTGAAGCAGCCCC+TGG | 0.552013 | 4.2:+7780170 | MS.gene030526:CDS |
| CTTCTACGAATCATTTGATG+AGG | 0.552271 | 4.2:+7773419 | MS.gene030526:CDS |
| CTTCTACGAATCATTTGATG+AGG | 0.552271 | 4.2:+7777825 | MS.gene030526:CDS |
| GCTGCAATAGGCTCAAAATC+GGG | 0.552533 | 4.2:-7780335 | None:intergenic |
| CAGCCCCTGGTTGTGGTGAG+TGG | 0.555593 | 4.2:+7780183 | MS.gene030526:CDS |
| TATCTTCGACCACAGGAGGC+TGG | 0.558917 | 4.2:+7775194 | MS.gene030526:CDS |
| TATCTTCGACCACAGGAGGC+TGG | 0.558917 | 4.2:+7779600 | MS.gene030526:CDS |
| TGGAATTCTTGTAGCCGTTG+TGG | 0.561141 | 4.2:+7780899 | MS.gene030526:CDS |
| TTCGACCACAGGAGGCTGGT+TGG | 0.565629 | 4.2:+7775198 | MS.gene030526:CDS |
| TTCGACCACAGGAGGCTGGT+TGG | 0.565629 | 4.2:+7779604 | MS.gene030526:CDS |
| CACATTCGAGGCCATTCTGA+AGG | 0.570634 | 4.2:-7775154 | None:intergenic |
| CACATTCGAGGCCATTCTGA+AGG | 0.570634 | 4.2:-7779560 | None:intergenic |
| TGCAGTAAAGCCTGATGACT+GGG | 0.572111 | 4.2:+7779989 | MS.gene030526:CDS |
| CAAGTGTGGGGCCACAAACA+AGG | 0.573921 | 4.2:+7775274 | MS.gene030526:CDS |
| CAAGTGTGGGGCCACAAACA+AGG | 0.573921 | 4.2:+7779680 | MS.gene030526:CDS |
| ATCGAAGGCTCCACGTCGGA+GGG | 0.574361 | 4.2:+7781145 | MS.gene030526:CDS |
| GGATCTGGGATTGTCTTGGG+AGG | 0.575634 | 4.2:-7775506 | None:intergenic |
| GGATCTGGGATTGTCTTGGG+AGG | 0.575634 | 4.2:-7779912 | None:intergenic |
| TCCTTCGTATCGTATTTGGT+GGG | 0.575662 | 4.2:+7780940 | MS.gene030526:CDS |
| TGGGCTTCCATGTAGTCTCC+CGG | 0.577142 | 4.2:-7780445 | None:intergenic |
| GGTTTCCAACCAGCCTCCTG+TGG | 0.577641 | 4.2:-7775203 | None:intergenic |
| GGTTTCCAACCAGCCTCCTG+TGG | 0.577641 | 4.2:-7779609 | None:intergenic |
| AGAGAATGAAGAAAACAAAG+AGG | 0.578426 | 4.2:+7781115 | MS.gene030526:CDS |
| CATCATCGGAGGCATGAAGA+AGG | 0.578690 | 4.2:-7773269 | None:intergenic |
| CATCATCGGAGGCATGAAGA+AGG | 0.578690 | 4.2:-7777675 | None:intergenic |
| AGATAAGAAACCTGAGGACT+GGG | 0.579804 | 4.2:+7775532 | MS.gene030526:CDS |
| AGATAAGAAACCTGAGGACT+GGG | 0.579804 | 4.2:+7779938 | MS.gene030526:CDS |
| ACGCAGCCGAATCTCACAGT+TGG | 0.579809 | 4.2:+7780879 | MS.gene030526:CDS |
| CTTCAGAATGGCCTCGAATG+TGG | 0.579974 | 4.2:+7775155 | MS.gene030526:CDS |
| CTTCAGAATGGCCTCGAATG+TGG | 0.579974 | 4.2:+7779561 | MS.gene030526:CDS |
| AGCTTGTAGGCACTCAGGAA+GGG | 0.580489 | 4.2:-7780720 | None:intergenic |
| ATGTTTGGTCCTGACAAGTG+TGG | 0.588377 | 4.2:+7775260 | MS.gene030526:CDS |
| ATGTTTGGTCCTGACAAGTG+TGG | 0.588377 | 4.2:+7779666 | MS.gene030526:CDS |
| GCTTGTCAGAGGGAACAGAT+GGG | 0.589147 | 4.2:-7775364 | None:intergenic |
| GCTTGTCAGAGGGAACAGAT+GGG | 0.589147 | 4.2:-7779770 | None:intergenic |
| AGAAGATTGGGACGATGAAG+AGG | 0.591248 | 4.2:+7780115 | MS.gene030526:CDS |
| CTGGAAGCATTCAAAGAGTG+AGG | 0.591782 | 4.2:+7775013 | MS.gene030526:CDS |
| CTGGAAGCATTCAAAGAGTG+AGG | 0.591782 | 4.2:+7779419 | MS.gene030526:CDS |
| TTGGTTAGTGGAAGTTTCTG+CGG | 0.593316 | 4.2:-7781084 | None:intergenic |
| CATCAGGCTTTACTGCACTT+GGG | 0.595755 | 4.2:-7775577 | None:intergenic |
| CATCGAAGGCTCCACGTCGG+AGG | 0.595933 | 4.2:+7781144 | MS.gene030526:CDS |
| TCTAAAATATCTTCGACCAC+AGG | 0.596292 | 4.2:+7775187 | MS.gene030526:CDS |
| TCTAAAATATCTTCGACCAC+AGG | 0.596292 | 4.2:+7779593 | MS.gene030526:CDS |
| CGCGTCATCGGCATCATCGG+AGG | 0.596344 | 4.2:-7773280 | None:intergenic |
| CGCGTCATCGGCATCATCGG+AGG | 0.596344 | 4.2:-7777686 | None:intergenic |
| CATCAGGCTTTACTGCACTT+GGG | 0.599406 | 4.2:-7779983 | None:intergenic |
| TGGAAGCATTCAAAGAGTGA+GGG | 0.600050 | 4.2:+7775014 | MS.gene030526:CDS |
| TGGAAGCATTCAAAGAGTGA+GGG | 0.600050 | 4.2:+7779420 | MS.gene030526:CDS |
| GTTAGTGGAAGTTTCTGCGG+CGG | 0.603337 | 4.2:-7781081 | None:intergenic |
| TTTCCACTCACCACAACCAG+GGG | 0.611036 | 4.2:-7780186 | None:intergenic |
| CTTGTCAGAGGGAACAGATG+GGG | 0.612571 | 4.2:-7775363 | None:intergenic |
| CTTGTCAGAGGGAACAGATG+GGG | 0.612571 | 4.2:-7779769 | None:intergenic |
| AAGCTGTGAAACCTGAAGGA+TGG | 0.618409 | 4.2:+7780045 | MS.gene030526:CDS |
| CTCCGATGATGCCGATGACG+CGG | 0.620894 | 4.2:+7773281 | MS.gene030526:CDS |
| CTCCGATGATGCCGATGACG+CGG | 0.620894 | 4.2:+7777687 | MS.gene030526:CDS |
| GTCTTGGGAGGGATAAGGGA+AGG | 0.622855 | 4.2:-7775494 | None:intergenic |
| GTCTTGGGAGGGATAAGGGA+AGG | 0.622855 | 4.2:-7779900 | None:intergenic |
| CACGTGAGATAGCTTGTCAG+AGG | 0.622862 | 4.2:-7775375 | None:intergenic |
| CACGTGAGATAGCTTGTCAG+AGG | 0.622862 | 4.2:-7779781 | None:intergenic |
| AAAATATCTTCGACCACAGG+AGG | 0.623259 | 4.2:+7775190 | MS.gene030526:CDS |
| AAAATATCTTCGACCACAGG+AGG | 0.623259 | 4.2:+7779596 | MS.gene030526:CDS |
| TATTGAGAAAGAGAAACAGA+AGG | 0.623870 | 4.2:+7780475 | MS.gene030526:CDS |
| TTGTCAGAGGGAACAGATGG+GGG | 0.626548 | 4.2:-7775362 | None:intergenic |
| TTGTCAGAGGGAACAGATGG+GGG | 0.626548 | 4.2:-7779768 | None:intergenic |
| TCTTCATCAAGAATTTCCAA+GGG | 0.634894 | 4.2:-7780023 | None:intergenic |
| CAAAGAGGAGGAAACATCGA+AGG | 0.636270 | 4.2:+7781130 | MS.gene030526:CDS |
| ATTTGGGTTAGTAATCTTAG+GGG | 0.637193 | 4.2:-7780153 | None:intergenic |
| ATGGTTAGATTATGAGCCTG+AGG | 0.638743 | 4.2:+7780064 | MS.gene030526:CDS |
| GAAAAGGACACTGAATCAAG+TGG | 0.639039 | 4.2:+7780503 | MS.gene030526:CDS |
| GAGATTTGGACAATGCAGGA+TGG | 0.641655 | 4.2:+7780368 | MS.gene030526:CDS |
| AAAGCCTGATGACTGGGATG+AGG | 0.642158 | 4.2:+7779995 | MS.gene030526:CDS |
| TCAGGGTTTGGAATATCCCG+AGG | 0.644357 | 4.2:-7780293 | None:intergenic |
| TCCCACCAAATACGATACGA+AGG | 0.645566 | 4.2:-7780941 | None:intergenic |
| GGAGGCTGGTTGGAAACCCA+AGG | 0.645830 | 4.2:+7775208 | MS.gene030526:CDS |
| GGAGGCTGGTTGGAAACCCA+AGG | 0.645830 | 4.2:+7779614 | MS.gene030526:CDS |
| AAGAAGAATCCAGCATACAA+GGG | 0.648479 | 4.2:+7780218 | MS.gene030526:CDS |
| GGAAGCATTCAAAGAGTGAG+GGG | 0.655093 | 4.2:+7775015 | MS.gene030526:CDS |
| GGAAGCATTCAAAGAGTGAG+GGG | 0.655093 | 4.2:+7779421 | MS.gene030526:CDS |
| TCCTGAAGATAAGAAACCTG+AGG | 0.657027 | 4.2:+7775526 | MS.gene030526:CDS |
| TCCTGAAGATAAGAAACCTG+AGG | 0.657027 | 4.2:+7779932 | MS.gene030526:CDS |
| CAGAATGGCCTCGAATGTGG+TGG | 0.657663 | 4.2:+7775158 | MS.gene030526:CDS |
| CAGAATGGCCTCGAATGTGG+TGG | 0.657663 | 4.2:+7779564 | MS.gene030526:CDS |
| GATCTGGGATTGTCTTGGGA+GGG | 0.659461 | 4.2:-7775505 | None:intergenic |
| GATCTGGGATTGTCTTGGGA+GGG | 0.659461 | 4.2:-7779911 | None:intergenic |
| TCTCGCTTTACCCTCCGACG+TGG | 0.660404 | 4.2:-7781155 | None:intergenic |
| TGTAGTCTCCCGGTATGACG+CGG | 0.661561 | 4.2:-7780435 | None:intergenic |
| GAAGAAGCTGTGAAACCTGA+AGG | 0.662222 | 4.2:+7780041 | MS.gene030526:CDS |
| GTTTGGTCCTGACAAGTGTG+GGG | 0.685526 | 4.2:+7775262 | MS.gene030526:CDS |
| GTTTGGTCCTGACAAGTGTG+GGG | 0.685526 | 4.2:+7779668 | MS.gene030526:CDS |
| TGAGGAGATAGATGACCCAG+AGG | 0.689200 | 4.2:+7780082 | MS.gene030526:CDS |
| ACGTGAGATAGCTTGTCAGA+GGG | 0.689496 | 4.2:-7775374 | None:intergenic |
| ACGTGAGATAGCTTGTCAGA+GGG | 0.689496 | 4.2:-7779780 | None:intergenic |
| ACTTCCACTAACCAAGACAG+TGG | 0.694252 | 4.2:+7781092 | MS.gene030526:CDS |
| TGTCAAGACAATAACCACAA+CGG | 0.738680 | 4.2:-7780913 | None:intergenic |
| AAACATCGAAGGCTCCACGT+CGG | 0.757199 | 4.2:+7781141 | MS.gene030526:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 7773195 | 7781184 | 7773195 | ID=MS.gene030526 |
| chr4.2 | mRNA | 7773195 | 7781184 | 7773195 | ID=MS.gene030526.t1;Parent=MS.gene030526 |
| chr4.2 | exon | 7773195 | 7773302 | 7773195 | ID=MS.gene030526.t1.exon1;Parent=MS.gene030526.t1 |
| chr4.2 | CDS | 7773195 | 7773302 | 7773195 | ID=cds.MS.gene030526.t1;Parent=MS.gene030526.t1 |
| chr4.2 | exon | 7773417 | 7773486 | 7773417 | ID=MS.gene030526.t1.exon2;Parent=MS.gene030526.t1 |
| chr4.2 | CDS | 7773417 | 7773486 | 7773417 | ID=cds.MS.gene030526.t1;Parent=MS.gene030526.t1 |
| chr4.2 | exon | 7775009 | 7775586 | 7775009 | ID=MS.gene030526.t1.exon3;Parent=MS.gene030526.t1 |
| chr4.2 | CDS | 7775009 | 7775586 | 7775009 | ID=cds.MS.gene030526.t1;Parent=MS.gene030526.t1 |
| chr4.2 | exon | 7777595 | 7777708 | 7777595 | ID=MS.gene030526.t1.exon4;Parent=MS.gene030526.t1 |
| chr4.2 | CDS | 7777595 | 7777708 | 7777595 | ID=cds.MS.gene030526.t1;Parent=MS.gene030526.t1 |
| chr4.2 | exon | 7777823 | 7777892 | 7777823 | ID=MS.gene030526.t1.exon5;Parent=MS.gene030526.t1 |
| chr4.2 | CDS | 7777823 | 7777892 | 7777823 | ID=cds.MS.gene030526.t1;Parent=MS.gene030526.t1 |
| chr4.2 | exon | 7779415 | 7780541 | 7779415 | ID=MS.gene030526.t1.exon6;Parent=MS.gene030526.t1 |
| chr4.2 | CDS | 7779415 | 7780541 | 7779415 | ID=cds.MS.gene030526.t1;Parent=MS.gene030526.t1 |
| chr4.2 | exon | 7780681 | 7780752 | 7780681 | ID=MS.gene030526.t1.exon7;Parent=MS.gene030526.t1 |
| chr4.2 | CDS | 7780681 | 7780752 | 7780681 | ID=cds.MS.gene030526.t1;Parent=MS.gene030526.t1 |
| chr4.2 | exon | 7780858 | 7780974 | 7780858 | ID=MS.gene030526.t1.exon8;Parent=MS.gene030526.t1 |
| chr4.2 | CDS | 7780858 | 7780974 | 7780858 | ID=cds.MS.gene030526.t1;Parent=MS.gene030526.t1 |
| chr4.2 | exon | 7781056 | 7781184 | 7781056 | ID=MS.gene030526.t1.exon9;Parent=MS.gene030526.t1 |
| chr4.2 | CDS | 7781056 | 7781184 | 7781056 | ID=cds.MS.gene030526.t1;Parent=MS.gene030526.t1 |
| Gene Sequence |
| Protein sequence |