AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene030631

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene030631.t1 MTR_8g093530 98.394 436 5 1 1 436 1 434 0.0 885
MS.gene030631.t1 MTR_3g090120 53.545 409 168 3 34 423 59 464 8.45e-157 452
MS.gene030631.t1 MTR_7g094750 44.847 359 179 7 92 434 91 446 7.22e-104 316
MS.gene030631.t1 MTR_2g022560 42.655 354 184 6 92 429 97 447 1.84e-100 307
MS.gene030631.t1 MTR_7g109550 40.841 333 189 3 92 418 137 467 1.45e-87 275
MS.gene030631.t1 MTR_7g094750 51.899 237 112 2 92 327 91 326 7.03e-87 268
MS.gene030631.t1 MTR_1g058380 35.539 408 239 10 44 430 5 409 4.59e-83 261
MS.gene030631.t1 MTR_4g121560 37.709 358 206 5 80 422 102 457 5.48e-82 260
MS.gene030631.t1 MTR_0136s0010 38.920 352 190 6 89 421 167 512 7.85e-81 259
MS.gene030631.t1 MTR_4g126950 35.735 347 206 5 89 421 106 449 1.76e-80 256
MS.gene030631.t1 MTR_5g059400 36.103 349 203 4 88 419 171 516 4.67e-79 254
MS.gene030631.t1 MTR_1g116130 36.103 349 203 4 88 419 171 516 4.67e-79 254
MS.gene030631.t1 MTR_7g093450 38.000 350 192 6 89 419 245 588 5.74e-79 256
MS.gene030631.t1 MTR_5g033800 36.337 344 203 4 90 419 143 484 1.67e-78 252
MS.gene030631.t1 MTR_8g069790 35.429 350 210 5 84 419 170 517 1.48e-75 245
MS.gene030631.t1 MTR_3g464570 34.483 348 195 6 92 419 43 377 2.78e-70 227
MS.gene030631.t1 MTR_2g073500 35.756 344 193 9 87 421 24 348 7.38e-66 214
MS.gene030631.t1 MTR_5g033800 41.004 239 139 1 90 328 143 379 1.51e-64 212
MS.gene030631.t1 MTR_4g016940 32.102 352 208 7 90 418 84 427 8.68e-64 211
MS.gene030631.t1 MTR_1g050448 31.633 392 230 10 44 418 5 375 3.90e-63 208
MS.gene030631.t1 MTR_5g034810 33.894 357 209 8 69 418 16 352 1.24e-62 206
MS.gene030631.t1 MTR_4g088030 34.030 335 198 7 92 419 33 351 2.01e-62 206
MS.gene030631.t1 MTR_4g087730 33.828 337 202 6 89 419 42 363 8.71e-62 204
MS.gene030631.t1 MTR_3g021060 31.642 335 208 7 90 418 44 363 9.43e-62 204
MS.gene030631.t1 MTR_2g015720 31.148 366 231 7 59 418 8 358 3.42e-61 203
MS.gene030631.t1 MTR_1g112210 32.845 341 202 6 90 418 57 382 4.22e-60 201
MS.gene030631.t1 MTR_5g071350 31.522 368 202 7 83 419 52 400 1.19e-59 200
MS.gene030631.t1 MTR_2g073510 34.821 336 191 10 90 414 31 349 1.04e-58 196
MS.gene030631.t1 MTR_8g463790 32.493 357 203 10 92 423 71 414 1.61e-58 197
MS.gene030631.t1 MTR_1g112210 33.724 341 186 7 90 418 57 369 1.62e-58 196
MS.gene030631.t1 MTR_3g049330 33.134 335 201 7 92 418 31 350 1.62e-58 196
MS.gene030631.t1 MTR_1g111010 35.799 338 184 13 90 419 30 342 2.91e-58 195
MS.gene030631.t1 MTR_4g014440 30.168 358 215 8 89 419 59 408 3.81e-58 196
MS.gene030631.t1 MTR_3g070900 31.161 353 212 7 92 420 106 451 7.41e-57 194
MS.gene030631.t1 MTR_7g068920 31.909 351 210 6 90 418 78 421 1.64e-56 192
MS.gene030631.t1 MTR_3g035830 29.129 333 215 6 92 418 31 348 2.29e-56 190
MS.gene030631.t1 MTR_4g079700 31.445 353 211 10 76 418 32 363 2.79e-56 190
MS.gene030631.t1 MTR_3g021090 29.787 329 210 6 92 414 31 344 4.64e-56 191
MS.gene030631.t1 MTR_7g070060 30.168 358 215 10 91 421 63 412 4.98e-56 191
MS.gene030631.t1 MTR_3g071650 32.286 350 208 8 92 419 89 431 5.58e-56 191
MS.gene030631.t1 MTR_5g083260 28.406 433 266 13 19 419 5 425 7.52e-55 188
MS.gene030631.t1 MTR_5g082880 31.667 360 210 10 90 421 163 514 1.38e-54 189
MS.gene030631.t1 MTR_4g014430 30.966 352 197 10 92 414 108 442 7.79e-53 183
MS.gene030631.t1 MTR_2g091175 31.361 338 212 7 87 419 45 367 8.20e-53 181
MS.gene030631.t1 MTR_3g464570 33.451 284 156 6 156 419 3 273 9.38e-50 170
MS.gene030631.t1 MTR_3g109840 33.240 358 187 16 92 415 73 412 4.40e-46 165
MS.gene030631.t1 MTR_7g033230 30.959 365 203 12 88 418 260 609 3.66e-45 166
MS.gene030631.t1 MTR_7g033230 30.959 365 203 12 88 418 330 679 5.65e-45 166
MS.gene030631.t1 MTR_8g104970 29.670 364 205 12 90 418 118 465 1.05e-43 159
MS.gene030631.t1 MTR_5g035090 31.092 357 202 12 91 416 82 425 1.54e-43 158
MS.gene030631.t1 MTR_5g035080 31.111 360 201 14 92 418 75 420 1.59e-43 158
MS.gene030631.t1 MTR_5g035150 30.812 357 211 10 90 418 83 431 3.76e-42 154
MS.gene030631.t1 MTR_7g070060 32.365 241 151 5 91 327 63 295 9.65e-42 150
MS.gene030631.t1 MTR_4g125060 28.814 354 227 10 84 418 124 471 2.30e-41 153
MS.gene030631.t1 MTR_6g016875 31.044 364 211 10 84 418 56 408 3.19e-41 152
MS.gene030631.t1 MTR_6g016880 28.571 371 230 12 89 435 75 434 8.95e-41 150
MS.gene030631.t1 MTR_4g125060 28.814 354 227 10 84 418 163 510 9.05e-41 152
MS.gene030631.t1 MTR_4g125060 28.814 354 227 10 84 418 192 539 1.01e-40 152
MS.gene030631.t1 MTR_7g019120 29.805 359 213 14 90 421 77 423 1.68e-40 150
MS.gene030631.t1 MTR_8g027900 29.526 359 211 12 90 418 209 555 1.72e-40 152
MS.gene030631.t1 MTR_6g061710 26.613 372 228 10 85 423 160 519 2.03e-39 149
MS.gene030631.t1 MTR_6g007777 26.004 473 260 17 23 421 4 460 2.74e-38 144
MS.gene030631.t1 MTR_8g093870 29.360 344 222 11 92 418 133 472 3.00e-38 144
MS.gene030631.t1 MTR_1g076690 26.790 377 231 11 80 423 211 575 2.72e-37 143
MS.gene030631.t1 MTR_8g099300 28.969 359 212 12 91 418 73 419 5.93e-37 140
MS.gene030631.t1 MTR_5g035070 28.045 353 218 10 92 416 87 431 1.23e-35 137
MS.gene030631.t1 MTR_7g070060 27.303 304 187 8 144 421 15 310 3.03e-35 132
MS.gene030631.t1 MTR_2g016060 29.178 353 215 12 93 418 56 400 3.45e-35 135
MS.gene030631.t1 MTR_2g022580 48.780 123 63 0 152 274 2 124 1.55e-34 125
MS.gene030631.t1 MTR_4g092830 28.333 360 215 13 92 421 48 394 1.99e-33 130
MS.gene030631.t1 MTR_6g016240 28.457 376 228 16 73 418 52 416 2.84e-29 119
MS.gene030631.t1 MTR_5g035120 42.857 91 52 0 90 180 73 163 1.38e-24 100
MS.gene030631.t1 MTR_7g019140 42.857 91 52 0 90 180 77 167 9.38e-23 95.1
MS.gene030631.t1 MTR_5g069320 26.978 278 161 5 138 411 147 386 5.59e-20 91.7
MS.gene030631.t1 MTR_5g035140 28.512 242 137 12 209 418 28 265 6.69e-16 78.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene030631.t1 AT1G48880 62.935 402 139 3 22 421 49 442 0.0 533
MS.gene030631.t1 AT5G19160 38.876 445 230 9 27 432 19 460 1.52e-101 310
MS.gene030631.t1 AT3G06080 43.785 354 178 6 92 427 103 453 4.45e-101 309
MS.gene030631.t1 AT3G62390 39.205 352 203 3 77 419 123 472 8.83e-92 286
MS.gene030631.t1 AT5G06230 38.162 359 201 5 81 420 10 366 2.92e-91 281
MS.gene030631.t1 AT5G06230 38.162 359 201 5 81 420 51 407 8.51e-91 281
MS.gene030631.t1 AT3G11570 40.741 324 181 3 108 420 98 421 3.21e-87 272
MS.gene030631.t1 AT5G19160 42.320 319 163 4 27 327 19 334 3.25e-84 262
MS.gene030631.t1 AT5G20590 37.572 346 202 6 89 421 138 482 8.68e-82 260
MS.gene030631.t1 AT3G06080 49.576 236 119 0 92 327 103 338 2.05e-81 254
MS.gene030631.t1 AT3G12060 36.963 349 205 4 89 423 193 540 3.38e-80 258
MS.gene030631.t1 AT5G06700 36.599 347 205 4 89 421 252 597 6.61e-78 253
MS.gene030631.t1 AT5G49340 37.714 350 201 6 89 422 97 445 1.85e-75 243
MS.gene030631.t1 AT3G62390 40.769 260 152 1 77 336 123 380 4.61e-72 233
MS.gene030631.t1 AT1G60790 34.493 345 208 5 92 419 190 533 1.03e-71 235
MS.gene030631.t1 AT5G06230 40.625 256 142 2 81 328 51 304 3.71e-70 224
MS.gene030631.t1 AT1G29050 32.267 375 225 7 59 418 18 378 9.14e-70 226
MS.gene030631.t1 AT2G34070 34.234 333 199 6 92 418 65 383 1.59e-65 215
MS.gene030631.t1 AT5G58600 34.000 350 195 9 92 419 66 401 6.37e-65 214
MS.gene030631.t1 AT5G20590 40.249 241 142 2 89 328 138 377 2.28e-64 212
MS.gene030631.t1 AT3G14850 34.328 335 198 6 92 418 34 354 2.61e-64 211
MS.gene030631.t1 AT1G78710 33.889 360 204 10 74 421 22 359 9.84e-64 209
MS.gene030631.t1 AT2G31110 33.718 347 209 8 79 418 30 362 1.08e-60 202
MS.gene030631.t1 AT3G11030 32.670 352 205 8 92 419 106 449 3.60e-60 203
MS.gene030631.t1 AT5G01360 30.484 351 214 7 91 418 35 378 1.36e-59 199
MS.gene030631.t1 AT2G30010 34.366 355 193 10 92 419 56 397 1.46e-59 200
MS.gene030631.t1 AT2G30010 34.366 355 193 10 92 419 99 440 3.60e-59 200
MS.gene030631.t1 AT5G01360 30.484 351 214 7 91 418 91 434 5.44e-59 199
MS.gene030631.t1 AT2G42570 30.028 353 222 6 80 421 29 367 2.07e-58 196
MS.gene030631.t1 AT3G54260 31.977 344 201 7 92 420 51 376 3.21e-58 196
MS.gene030631.t1 AT2G30900 33.235 340 199 10 92 419 43 366 1.78e-57 193
MS.gene030631.t1 AT3G55990 30.726 358 211 8 90 420 138 485 1.76e-55 191
MS.gene030631.t1 AT2G40150 30.579 363 209 8 91 420 70 422 8.60e-55 188
MS.gene030631.t1 AT1G73140 30.362 359 216 9 84 419 59 406 4.45e-54 186
MS.gene030631.t1 AT2G40320 30.769 351 212 9 92 419 81 423 1.18e-53 185
MS.gene030631.t1 AT2G40160 30.579 363 216 10 89 424 74 427 3.84e-53 184
MS.gene030631.t1 AT2G38320 28.056 360 224 8 90 422 57 408 5.83e-53 182
MS.gene030631.t1 AT2G40160 30.595 353 211 9 89 414 74 419 1.21e-52 182
MS.gene030631.t1 AT5G01620 29.558 362 222 8 76 415 96 446 3.45e-52 182
MS.gene030631.t1 AT5G01620 29.558 362 222 8 76 415 96 446 3.45e-52 182
MS.gene030631.t1 AT5G01620 29.558 362 222 8 76 415 104 454 4.21e-52 182
MS.gene030631.t1 AT5G58600 35.865 237 138 3 92 327 66 289 2.30e-50 172
MS.gene030631.t1 AT1G78710 28.977 352 179 9 74 421 15 299 1.08e-44 157
MS.gene030631.t1 AT1G01430 30.110 362 209 11 91 419 98 448 2.07e-44 161
MS.gene030631.t1 AT2G38320 27.217 327 204 7 122 422 7 325 6.42e-44 156
MS.gene030631.t1 AT1G70230 30.460 348 206 12 92 418 79 411 7.45e-43 156
MS.gene030631.t1 AT5G64470 31.564 358 206 15 92 421 55 401 1.00e-42 155
MS.gene030631.t1 AT2G31110 34.940 249 146 6 78 324 29 263 1.87e-42 151
MS.gene030631.t1 AT5G64470 31.044 364 206 15 92 421 55 407 1.32e-41 152
MS.gene030631.t1 AT2G30900 34.335 233 135 5 92 321 43 260 2.24e-41 148
MS.gene030631.t1 AT4G01080 30.618 356 198 11 91 415 90 427 6.70e-41 151
MS.gene030631.t1 AT3G02440 31.445 353 205 12 92 418 127 468 2.05e-40 150
MS.gene030631.t1 AT3G02440 31.445 353 205 12 92 418 135 476 2.14e-40 150
MS.gene030631.t1 AT4G23790 30.833 360 211 11 89 418 76 427 1.39e-39 147
MS.gene030631.t1 AT5G64020 28.771 358 218 11 92 418 57 408 2.64e-39 146
MS.gene030631.t1 AT4G11090 30.278 360 205 13 89 415 76 422 3.46e-39 146
MS.gene030631.t1 AT2G34070 30.798 263 162 6 162 418 1 249 1.06e-38 140
MS.gene030631.t1 AT3G14850 32.950 261 153 7 162 414 1 247 1.08e-38 140
MS.gene030631.t1 AT5G15890 30.226 354 208 13 92 421 187 525 1.81e-38 146
MS.gene030631.t1 AT2G40160 31.967 244 154 5 89 327 74 310 3.62e-38 140
MS.gene030631.t1 AT2G37720 27.920 351 224 10 89 418 140 482 5.89e-38 144
MS.gene030631.t1 AT4G25360 26.389 360 218 10 91 415 174 521 8.10e-38 144
MS.gene030631.t1 AT4G25360 26.389 360 218 10 91 415 174 521 8.10e-38 144
MS.gene030631.t1 AT5G20680 26.648 349 229 11 90 418 116 457 1.56e-34 134
MS.gene030631.t1 AT5G20680 27.042 355 220 12 90 418 192 533 4.33e-34 134
MS.gene030631.t1 AT5G20680 27.042 355 220 12 90 418 210 551 6.67e-34 134
MS.gene030631.t1 AT5G20680 27.042 355 220 12 90 418 210 551 6.67e-34 134
MS.gene030631.t1 AT5G20680 27.042 355 220 12 90 418 210 551 6.67e-34 134
MS.gene030631.t1 AT5G20680 27.042 355 220 12 90 418 210 551 6.67e-34 134
MS.gene030631.t1 AT5G15900 29.201 363 217 14 92 426 67 417 1.30e-33 131
MS.gene030631.t1 AT5G15900 29.201 363 217 14 92 426 86 436 1.81e-33 131
MS.gene030631.t1 AT3G28150 29.345 351 212 13 91 416 69 408 2.69e-33 130
MS.gene030631.t1 AT5G51640 25.745 369 226 9 91 423 137 493 2.57e-32 128
MS.gene030631.t1 AT2G14530 29.363 361 209 15 92 420 62 408 4.35e-32 126
MS.gene030631.t1 AT5G64470 32.129 249 145 10 92 327 55 292 6.79e-30 119
MS.gene030631.t1 AT5G64470 32.129 249 145 10 92 327 55 292 7.88e-30 118
MS.gene030631.t1 AT2G31110 32.710 214 132 5 210 418 8 214 1.07e-29 115

Find 73 sgRNAs with CRISPR-Local

Find 201 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCCAAAGCGGTTGATAAT+TGG 0.219439 4.2:-9252376 None:intergenic
CACTCAAAACTTGGACTTCA+TGG 0.229773 4.2:+9253961 MS.gene030631:CDS
TGGAAATGTTGAGGAGTAAA+AGG 0.261320 4.2:+9252758 MS.gene030631:CDS
GTTGGAATTTCACAACTCTT+AGG 0.273880 4.2:-9252715 None:intergenic
ATAATTTCATTCCACATATC+AGG 0.293452 4.2:-9254741 None:intergenic
CAACAGGGGTTGTTATTTCC+AGG 0.328258 4.2:+9253887 MS.gene030631:intron
TAGTCTCAAAAGTGGGGAAC+TGG 0.339854 4.2:-9254539 None:intergenic
ATCAGATTACAAAGAGGATT+AGG 0.354758 4.2:+9252887 MS.gene030631:CDS
AAAGCGGTTGATAATTGGTT+TGG 0.356984 4.2:-9252371 None:intergenic
GAACAAGGATTTGATTGTTT+AGG 0.359561 4.2:+9252649 MS.gene030631:CDS
AGGAAATGGAAGAAGTGATT+TGG 0.360249 4.2:+9252669 MS.gene030631:CDS
GGAACATGGGTTCAAGTATC+TGG 0.373068 4.2:+9252589 MS.gene030631:CDS
GTAACATGGAGAACGTTTAT+AGG 0.374567 4.2:-9254624 None:intergenic
GATATTCTTATATTCAATAC+TGG 0.385489 4.2:+9253072 MS.gene030631:CDS
GGATTTGATTGTTTAGGAAA+TGG 0.407456 4.2:+9252655 MS.gene030631:CDS
AAGCGGTTGATAATTGGTTT+GGG 0.409808 4.2:-9252370 None:intergenic
AGAATGAGATCTTCTGTTGA+AGG 0.411442 4.2:-9252332 None:intergenic
GCTTTGGATGTGTTTCTTTG+AGG 0.416695 4.2:+9252389 MS.gene030631:CDS
GTGATGCACATGTTGGTAAC+TGG 0.425219 4.2:+9254667 MS.gene030631:CDS
ATAAAATAGCACTCAAAACT+TGG 0.427959 4.2:+9253952 MS.gene030631:CDS
AAACCAATTATCAACCGCTT+TGG 0.428304 4.2:+9252373 MS.gene030631:CDS
TCCTTCTTTATAGCAATTGG+TGG 0.441666 4.2:+9252445 MS.gene030631:CDS
TTGGAAGATCTCTGAAGCTT+GGG 0.445761 4.2:+9253910 MS.gene030631:CDS
TTGATTTGTATGTTGATGAC+TGG 0.450820 4.2:+9252826 MS.gene030631:CDS
TGCAGCCATTGGTGTCTACC+TGG 0.456267 4.2:+9254714 MS.gene030631:CDS
TTCTTTATAGCAATTGGTGG+TGG 0.458019 4.2:+9252448 MS.gene030631:CDS
AGTGTTGATTTAACCCTCCT+TGG 0.459189 4.2:-9253003 None:intergenic
TCAAATCCTTGTTCAACAAA+AGG 0.464197 4.2:-9252640 None:intergenic
GGAAATGTTGAGGAGTAAAA+GGG 0.480993 4.2:+9252759 MS.gene030631:CDS
GTTGGAAGATCTCTGAAGCT+TGG 0.483244 4.2:+9253909 MS.gene030631:CDS
GAATGATAATCCATTGAGTC+AGG 0.483902 4.2:+9254689 MS.gene030631:CDS
TGGCTGCAATCCTGACTCAA+TGG 0.488106 4.2:-9254699 None:intergenic
TTCAATGAGTAGAACTCAAT+GGG 0.495930 4.2:+9252798 MS.gene030631:CDS
ATTCAATGAGTAGAACTCAA+TGG 0.504721 4.2:+9252797 MS.gene030631:CDS
TTATATTCAATACTGGTCAC+TGG 0.507782 4.2:+9253079 MS.gene030631:CDS
TTCCACATATCAGGCACTCC+AGG 0.511171 4.2:-9254732 None:intergenic
AGATCTCATTCTCAACCTCT+TGG 0.514412 4.2:+9252343 MS.gene030631:CDS
TTTCTTGGTACAGCAGCGTC+CGG 0.518646 4.2:+9252966 MS.gene030631:CDS
TGAGTCAGGATTGCAGCCAT+TGG 0.524273 4.2:+9254703 MS.gene030631:CDS
ACCACCAATTGCTATAAAGA+AGG 0.526497 4.2:-9252446 None:intergenic
CTTGGTGCATGTTCATGAGC+CGG 0.529839 4.2:-9252985 None:intergenic
GGGTTACATTGCAAGTCCTA+CGG 0.531440 4.2:-9254518 None:intergenic
ACAGCACCAACATCAAAAGT+TGG 0.536992 4.2:-9252733 None:intergenic
TAGATGATATAAGTCATCAA+TGG 0.537422 4.2:+9253040 MS.gene030631:CDS
TACCTGGAGTGCCTGATATG+TGG 0.545087 4.2:+9254730 MS.gene030631:CDS
GGTTACATTGCAAGTCCTAC+GGG 0.554442 4.2:-9254517 None:intergenic
TACGTGTGGAAAAGCTTAGA+TGG 0.556442 4.2:-9253108 None:intergenic
CGTTGCATTAGTCTCAAAAG+TGG 0.557442 4.2:-9254547 None:intergenic
GTTGCATTAGTCTCAAAAGT+GGG 0.563412 4.2:-9254546 None:intergenic
AGGGGTTGTTATTTCCAGGT+TGG 0.564868 4.2:+9253891 MS.gene030631:intron
AGAAGCTGAACTTACTGTGT+AGG 0.573237 4.2:-9254813 None:intergenic
AGTCTCAAAAGTGGGGAACT+GGG 0.574184 4.2:-9254538 None:intergenic
TATTCAATACTGGTCACTGG+TGG 0.581699 4.2:+9253082 MS.gene030631:CDS
TGGGAATACCTCCAGTGAGA+TGG 0.587027 4.2:-9254038 None:intergenic
GCTTCAGAGATCTTCCAACC+TGG 0.590103 4.2:-9253905 None:intergenic
CCTCGCAGTGATGCACATGT+TGG 0.597967 4.2:+9254660 MS.gene030631:CDS
TATGTTGATGACTGGTGTGG+AGG 0.600077 4.2:+9252834 MS.gene030631:CDS
TTGTATGTTGATGACTGGTG+TGG 0.600347 4.2:+9252831 MS.gene030631:CDS
TCATGAACATGCACCAAGGA+GGG 0.607670 4.2:+9252990 MS.gene030631:CDS
GAGCCGACATAGATGTAACA+TGG 0.615016 4.2:-9254638 None:intergenic
TCTCCATGTTACATCTATGT+CGG 0.618261 4.2:+9254635 MS.gene030631:CDS
ATTCAATACTGGTCACTGGT+GGG 0.631466 4.2:+9253083 MS.gene030631:CDS
GCACTCCAGGTAGACACCAA+TGG 0.634922 4.2:-9254719 None:intergenic
ATCAGAATCAGATTACAAAG+AGG 0.636550 4.2:+9252881 MS.gene030631:CDS
CACTCAGTTGCATTATACAA+AGG 0.639596 4.2:-9252616 None:intergenic
CTCATGAACATGCACCAAGG+AGG 0.668023 4.2:+9252989 MS.gene030631:CDS
GGCTTTGTCACAAACATGAG+TGG 0.668070 4.2:+9252286 None:intergenic
ATTGGTTTGGGACTACCAAG+AGG 0.679709 4.2:-9252358 None:intergenic
TTGCATTAGTCTCAAAAGTG+GGG 0.688555 4.2:-9254545 None:intergenic
CGGCTCATGAACATGCACCA+AGG 0.691315 4.2:+9252986 MS.gene030631:CDS
TCAAAGAAACACATCCAAAG+CGG 0.695679 4.2:-9252387 None:intergenic
GCTGCAGTGATGATACCCGT+AGG 0.703800 4.2:+9254502 MS.gene030631:intron
CCAACATGTGCATCACTGCG+AGG 0.720577 4.2:-9254660 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAAATATTGTTATAAAGA+AGG - chr4.2:9254423-9254442 None:intergenic 15.0%
!! AAAATTAACAACAGCAAATA+TGG - chr4.2:9253276-9253295 None:intergenic 20.0%
!! AGTTGAAATATTGAAAAGAA+TGG - chr4.2:9253139-9253158 None:intergenic 20.0%
!! ATTTAAGAGAAAGACTATAA+GGG + chr4.2:9253471-9253490 MS.gene030631:intron 20.0%
!! GATATTCTTATATTCAATAC+TGG + chr4.2:9253072-9253091 MS.gene030631:CDS 20.0%
!! TATTTAAGAGAAAGACTATA+AGG + chr4.2:9253470-9253489 MS.gene030631:intron 20.0%
!! TTCATATTCAGTAAAAAGTT+GGG - chr4.2:9254772-9254791 None:intergenic 20.0%
!! TTTCATATTCAGTAAAAAGT+TGG - chr4.2:9254773-9254792 None:intergenic 20.0%
!!! AGTTTTAGAGTTAATATAAC+AGG + chr4.2:9253495-9253514 MS.gene030631:intron 20.0%
! AACATAAAAAAACAGCCTTT+CGG - chr4.2:9253548-9253567 None:intergenic 25.0%
! ATAAAATAGCACTCAAAACT+TGG + chr4.2:9253952-9253971 MS.gene030631:CDS 25.0%
! ATAATTTCATTCCACATATC+AGG - chr4.2:9254744-9254763 None:intergenic 25.0%
! TAGATGATATAAGTCATCAA+TGG + chr4.2:9253040-9253059 MS.gene030631:CDS 25.0%
! TTGTTTATCAGTAGGTTTAA+GGG + chr4.2:9253343-9253362 MS.gene030631:intron 25.0%
! TTTGTTTATCAGTAGGTTTA+AGG + chr4.2:9253342-9253361 MS.gene030631:intron 25.0%
!! AAATCTGTGTTTTCATATTC+TGG + chr4.2:9253813-9253832 MS.gene030631:intron 25.0%
!! GATGATAGACACTTAAATTT+TGG + chr4.2:9253631-9253650 MS.gene030631:intron 25.0%
!! TCTAACACATTTTCTATTTC+TGG + chr4.2:9254944-9254963 MS.gene030631:intron 25.0%
!! TTTTCCTTCTTTATAGCAAT+TGG + chr4.2:9252442-9252461 MS.gene030631:CDS 25.0%
!!! AGAAAATGTGATGTTTTTGA+TGG + chr4.2:9252568-9252587 MS.gene030631:CDS 25.0%
!!! AGTTTTGAGTGCTATTTTAT+AGG - chr4.2:9253952-9253971 None:intergenic 25.0%
!!! ATCACACATGCTTTTTTTAA+TGG + chr4.2:9252493-9252512 MS.gene030631:CDS 25.0%
!!! ATGAAAACACAGATTTGTTA+AGG - chr4.2:9253809-9253828 None:intergenic 25.0%
!!! ATTTTTTCGATCTGTTTTCT+TGG + chr4.2:9252951-9252970 MS.gene030631:CDS 25.0%
!!! CTGGAATCTATTTTTGTTTT+TGG + chr4.2:9253832-9253851 MS.gene030631:intron 25.0%
!!! GATCTTTTTGTTTGTTAATG+AGG + chr4.2:9253676-9253695 MS.gene030631:intron 25.0%
!!! TACTCTTTATCTCTCTTTTT+TGG - chr4.2:9254876-9254895 None:intergenic 25.0%
!!! TAGGTTCATTTTCTGAAAAA+GGG - chr4.2:9254797-9254816 None:intergenic 25.0%
!!! TGAAAACACAGATTTGTTAA+GGG - chr4.2:9253808-9253827 None:intergenic 25.0%
!!! TTGCTAATTTGTTTATCAGT+AGG + chr4.2:9253335-9253354 MS.gene030631:intron 25.0%
AATATGAAGACTGAAGAGTA+TGG - chr4.2:9253313-9253332 None:intergenic 30.0%
ACTAAAGTTCATTAACCACT+TGG + chr4.2:9254355-9254374 MS.gene030631:intron 30.0%
ATCAGAATCAGATTACAAAG+AGG + chr4.2:9252881-9252900 MS.gene030631:CDS 30.0%
ATCAGATTACAAAGAGGATT+AGG + chr4.2:9252887-9252906 MS.gene030631:CDS 30.0%
ATTATACTTGCTCAAAACAG+TGG - chr4.2:9253783-9253802 None:intergenic 30.0%
ATTCAATGAGTAGAACTCAA+TGG + chr4.2:9252797-9252816 MS.gene030631:CDS 30.0%
CATCATGTTATCCATAATGT+GGG - chr4.2:9254060-9254079 None:intergenic 30.0%
GAACAAGGATTTGATTGTTT+AGG + chr4.2:9252649-9252668 MS.gene030631:CDS 30.0%
GGATTTGATTGTTTAGGAAA+TGG + chr4.2:9252655-9252674 MS.gene030631:CDS 30.0%
TCAAATCCTTGTTCAACAAA+AGG - chr4.2:9252643-9252662 None:intergenic 30.0%
TGGTTAATGAACTTTAGTCA+AGG - chr4.2:9254353-9254372 None:intergenic 30.0%
TGTTTATCAGTAGGTTTAAG+GGG + chr4.2:9253344-9253363 MS.gene030631:intron 30.0%
TTATATTCAATACTGGTCAC+TGG + chr4.2:9253079-9253098 MS.gene030631:CDS 30.0%
TTCAATGAGTAGAACTCAAT+GGG + chr4.2:9252798-9252817 MS.gene030631:CDS 30.0%
! AAAAAAGCATGTGTGATACT+AGG - chr4.2:9252490-9252509 None:intergenic 30.0%
! ACAAAGAGGATTAGGTTTTT+AGG + chr4.2:9252895-9252914 MS.gene030631:CDS 30.0%
! ATCCTGACTTGAACAATTAT+TGG - chr4.2:9254301-9254320 None:intergenic 30.0%
! ATTTGGATTTTCTTTCATGG+AGG + chr4.2:9252686-9252705 MS.gene030631:CDS 30.0%
! GAAATTCCAACTTTTGATGT+TGG + chr4.2:9252727-9252746 MS.gene030631:CDS 30.0%
! GTTCTCAGTCTTTTAATAGT+TGG - chr4.2:9254849-9254868 None:intergenic 30.0%
!! GTAGGTTCATTTTCTGAAAA+AGG - chr4.2:9254798-9254817 None:intergenic 30.0%
!! GTGATTTGGATTTTCTTTCA+TGG + chr4.2:9252683-9252702 MS.gene030631:CDS 30.0%
!! TGATGTTTTTGATGGAACAT+GGG + chr4.2:9252576-9252595 MS.gene030631:CDS 30.0%
!! TTGATTTGTATGTTGATGAC+TGG + chr4.2:9252826-9252845 MS.gene030631:CDS 30.0%
!!! AGTAAAAGGGTTGTTTTTGT+TGG + chr4.2:9252772-9252791 MS.gene030631:CDS 30.0%
!!! CATGCTTTTTTTAATGGACA+AGG + chr4.2:9252499-9252518 MS.gene030631:CDS 30.0%
!!! TTTGAGTGCTATTTTATAGG+CGG - chr4.2:9253949-9253968 None:intergenic 30.0%
AAACCAATTATCAACCGCTT+TGG + chr4.2:9252373-9252392 MS.gene030631:CDS 35.0%
AAGTTCATTAACCACTTGGT+TGG + chr4.2:9254359-9254378 MS.gene030631:intron 35.0%
ACATCCATTGTTCTCGTATT+AGG + chr4.2:9253415-9253434 MS.gene030631:intron 35.0%
ACCACCAATTGCTATAAAGA+AGG - chr4.2:9252449-9252468 None:intergenic 35.0%
AGAACCTAATACGAGAACAA+TGG - chr4.2:9253422-9253441 None:intergenic 35.0%
AGAATGAGATCTTCTGTTGA+AGG - chr4.2:9252335-9252354 None:intergenic 35.0%
AGGAAATGGAAGAAGTGATT+TGG + chr4.2:9252669-9252688 MS.gene030631:CDS 35.0%
ATTCAGTAAAAAGTTGGGAC+AGG - chr4.2:9254767-9254786 None:intergenic 35.0%
CACGAACTTCAATATCATGA+CGG - chr4.2:9253445-9253464 None:intergenic 35.0%
CACTCAGTTGCATTATACAA+AGG - chr4.2:9252619-9252638 None:intergenic 35.0%
GAATGATAATCCATTGAGTC+AGG + chr4.2:9254689-9254708 MS.gene030631:CDS 35.0%
GATATGGATTCCCAAAACTA+GGG - chr4.2:9254174-9254193 None:intergenic 35.0%
GCATCATGTTATCCATAATG+TGG - chr4.2:9254061-9254080 None:intergenic 35.0%
GGAAATGTTGAGGAGTAAAA+GGG + chr4.2:9252759-9252778 MS.gene030631:CDS 35.0%
GTAACATGGAGAACGTTTAT+AGG - chr4.2:9254627-9254646 None:intergenic 35.0%
GTTGGAATTTCACAACTCTT+AGG - chr4.2:9252718-9252737 None:intergenic 35.0%
GTTTATCAGTAGGTTTAAGG+GGG + chr4.2:9253345-9253364 MS.gene030631:intron 35.0%
TCAAAGAAACACATCCAAAG+CGG - chr4.2:9252390-9252409 None:intergenic 35.0%
TCAAGTCAGGATTCAAATTC+AGG + chr4.2:9254309-9254328 MS.gene030631:intron 35.0%
TCCTTCTTTATAGCAATTGG+TGG + chr4.2:9252445-9252464 MS.gene030631:CDS 35.0%
TCTCCATGTTACATCTATGT+CGG + chr4.2:9254635-9254654 MS.gene030631:CDS 35.0%
TGCCAATAATTGTTCAAGTC+AGG + chr4.2:9254296-9254315 MS.gene030631:intron 35.0%
TGGAAATGTTGAGGAGTAAA+AGG + chr4.2:9252758-9252777 MS.gene030631:CDS 35.0%
TTCTTTATAGCAATTGGTGG+TGG + chr4.2:9252448-9252467 MS.gene030631:CDS 35.0%
TTTATCAGTAGGTTTAAGGG+GGG + chr4.2:9253346-9253365 MS.gene030631:intron 35.0%
! ACTCAAACACAATTGAGTTG+TGG - chr4.2:9253245-9253264 None:intergenic 35.0%
! GTTGCATTAGTCTCAAAAGT+GGG - chr4.2:9254549-9254568 None:intergenic 35.0%
! TTGCATTAGTCTCAAAAGTG+GGG - chr4.2:9254548-9254567 None:intergenic 35.0%
!! AAAGCGGTTGATAATTGGTT+TGG - chr4.2:9252374-9252393 None:intergenic 35.0%
!! AAGCGGTTGATAATTGGTTT+GGG - chr4.2:9252373-9252392 None:intergenic 35.0%
!! GGATTAGGTTTTTAGGAGTT+AGG + chr4.2:9252902-9252921 MS.gene030631:CDS 35.0%
!! GTGATGTTTTTGATGGAACA+TGG + chr4.2:9252575-9252594 MS.gene030631:CDS 35.0%
!! TCATCTTGATTTTCAAGCAG+TGG - chr4.2:9253616-9253635 None:intergenic 35.0%
!!! ATAGAACACGCGTCTTTTTT+AGG + chr4.2:9254006-9254025 MS.gene030631:CDS 35.0%
!!! CACTTTTGAGACTAATGCAA+CGG + chr4.2:9254548-9254567 MS.gene030631:CDS 35.0%
!!! TTTTGATGTTGGTGCTGTTT+TGG + chr4.2:9252738-9252757 MS.gene030631:CDS 35.0%
!!! TTTTTTTTGTCTTCACCCTC+CGG + chr4.2:9254215-9254234 MS.gene030631:intron 35.0%
AAAGAATGGAACCTTACGTG+TGG - chr4.2:9253125-9253144 None:intergenic 40.0%
ACAGCACCAACATCAAAAGT+TGG - chr4.2:9252736-9252755 None:intergenic 40.0%
AGAAGCTGAACTTACTGTGT+AGG - chr4.2:9254816-9254835 None:intergenic 40.0%
AGATCTCATTCTCAACCTCT+TGG + chr4.2:9252343-9252362 MS.gene030631:CDS 40.0%
ATCCTCTTCTTGCATTCAAC+AGG + chr4.2:9253871-9253890 MS.gene030631:intron 40.0%
ATTCAATACTGGTCACTGGT+GGG + chr4.2:9253083-9253102 MS.gene030631:CDS 40.0%
CACTCAAAACTTGGACTTCA+TGG + chr4.2:9253961-9253980 MS.gene030631:CDS 40.0%
CGATATGGATTCCCAAAACT+AGG - chr4.2:9254175-9254194 None:intergenic 40.0%
GCTTATAGAATCCAACCAAG+TGG - chr4.2:9254373-9254392 None:intergenic 40.0%
TACGTGTGGAAAAGCTTAGA+TGG - chr4.2:9253111-9253130 None:intergenic 40.0%
TAGTCAAGGTCAAAACGATC+AGG - chr4.2:9254339-9254358 None:intergenic 40.0%
TATTCAATACTGGTCACTGG+TGG + chr4.2:9253082-9253101 MS.gene030631:CDS 40.0%
TCCCAAAACATTTGACCGAA+AGG + chr4.2:9253530-9253549 MS.gene030631:intron 40.0%
TCCTCTTCTTGCATTCAACA+GGG + chr4.2:9253872-9253891 MS.gene030631:intron 40.0%
TCTTCTGATTTATGCTCGCT+TGG + chr4.2:9253654-9253673 MS.gene030631:intron 40.0%
! AAGCATGCATTCCCTAGTTT+TGG + chr4.2:9254160-9254179 MS.gene030631:intron 40.0%
! AGCCTTTCGGTCAAATGTTT+TGG - chr4.2:9253535-9253554 None:intergenic 40.0%
! CGTTGCATTAGTCTCAAAAG+TGG - chr4.2:9254550-9254569 None:intergenic 40.0%
! GAGTGTCCTTTTGTTGAACA+AGG + chr4.2:9252634-9252653 MS.gene030631:CDS 40.0%
! GCCTTTCGGTCAAATGTTTT+GGG - chr4.2:9253534-9253553 None:intergenic 40.0%
! GCTTTGGATGTGTTTCTTTG+AGG + chr4.2:9252389-9252408 MS.gene030631:CDS 40.0%
! GTTTGTTAATGAGGCCTATC+AGG + chr4.2:9253685-9253704 MS.gene030631:intron 40.0%
! TCTAAGCTTTTCCACACGTA+AGG + chr4.2:9253111-9253130 MS.gene030631:intron 40.0%
! TGGATTTTCTTTCATGGAGG+TGG + chr4.2:9252689-9252708 MS.gene030631:CDS 40.0%
!! AGCATGCATTCCCTAGTTTT+GGG + chr4.2:9254161-9254180 MS.gene030631:intron 40.0%
!! AGTGTTGATTTAACCCTCCT+TGG - chr4.2:9253006-9253025 None:intergenic 40.0%
!! CATCCAAAGCGGTTGATAAT+TGG - chr4.2:9252379-9252398 None:intergenic 40.0%
!! TTGATTTTCAAGCAGTGGCA+AGG - chr4.2:9253611-9253630 None:intergenic 40.0%
!! TTGGAAGATCTCTGAAGCTT+GGG + chr4.2:9253910-9253929 MS.gene030631:CDS 40.0%
!! TTGTATGTTGATGACTGGTG+TGG + chr4.2:9252831-9252850 MS.gene030631:CDS 40.0%
!!! GTGCTGTTTTGGAAATGTTG+AGG + chr4.2:9252749-9252768 MS.gene030631:CDS 40.0%
AACTGTAAGCCAGTAGCGTT+TGG + chr4.2:9253155-9253174 MS.gene030631:intron 45.0%
AGTCTCAAAAGTGGGGAACT+GGG - chr4.2:9254541-9254560 None:intergenic 45.0%
CCTCTTCTTGCATTCAACAG+GGG + chr4.2:9253873-9253892 MS.gene030631:intron 45.0%
GAGCCGACATAGATGTAACA+TGG - chr4.2:9254641-9254660 None:intergenic 45.0%
GGAACATGGGTTCAAGTATC+TGG + chr4.2:9252589-9252608 MS.gene030631:CDS 45.0%
GGGTTACATTGCAAGTCCTA+CGG - chr4.2:9254521-9254540 None:intergenic 45.0%
GGTTACATTGCAAGTCCTAC+GGG - chr4.2:9254520-9254539 None:intergenic 45.0%
TAGTCTCAAAAGTGGGGAAC+TGG - chr4.2:9254542-9254561 None:intergenic 45.0%
TATCAGGACCCTCCTAGAAA+GGG + chr4.2:9253701-9253720 MS.gene030631:intron 45.0%
TCACTATGTCCACCCTTTCT+AGG - chr4.2:9253716-9253735 None:intergenic 45.0%
TCATGAACATGCACCAAGGA+GGG + chr4.2:9252990-9253009 MS.gene030631:CDS 45.0%
TTGGGAATCCATATCGTGCA+CGG + chr4.2:9254179-9254198 MS.gene030631:intron 45.0%
! ATGCATGCTTGCTACGTGTA+AGG - chr4.2:9254150-9254169 None:intergenic 45.0%
! CTCGTTTTCAGACACAGTGT+TGG + chr4.2:9254578-9254597 MS.gene030631:CDS 45.0%
! TATGTCCACCCTTTCTAGGA+GGG - chr4.2:9253712-9253731 None:intergenic 45.0%
!! AGGGGTTGTTATTTCCAGGT+TGG + chr4.2:9253891-9253910 MS.gene030631:intron 45.0%
!! ATTGGTTTGGGACTACCAAG+AGG - chr4.2:9252361-9252380 None:intergenic 45.0%
!! CAACAGGGGTTGTTATTTCC+AGG + chr4.2:9253887-9253906 MS.gene030631:intron 45.0%
!! CTGGAGGTATTCCCACATTA+TGG + chr4.2:9254046-9254065 MS.gene030631:intron 45.0%
!! GTGATGCACATGTTGGTAAC+TGG + chr4.2:9254667-9254686 MS.gene030631:CDS 45.0%
!! GTTGGAAGATCTCTGAAGCT+TGG + chr4.2:9253909-9253928 MS.gene030631:CDS 45.0%
!! TATGTTGATGACTGGTGTGG+AGG + chr4.2:9252834-9252853 MS.gene030631:CDS 45.0%
!!! AGTGCTATTTTATAGGCGGC+AGG - chr4.2:9253945-9253964 None:intergenic 45.0%
AAAGACCATGTCCTCGCGAT+TGG - chr4.2:9253204-9253223 None:intergenic 50.0%
AAGACCATGTCCTCGCGATT+GGG - chr4.2:9253203-9253222 None:intergenic 50.0%
AGAGAATCCCGTGCACGATA+TGG - chr4.2:9254190-9254209 None:intergenic 50.0%
CCCCTGTTGAATGCAAGAAG+AGG - chr4.2:9253876-9253895 None:intergenic 50.0%
CTATCAGGACCCTCCTAGAA+AGG + chr4.2:9253700-9253719 MS.gene030631:intron 50.0%
CTATGTCCACCCTTTCTAGG+AGG - chr4.2:9253713-9253732 None:intergenic 50.0%
CTCATGAACATGCACCAAGG+AGG + chr4.2:9252989-9253008 MS.gene030631:CDS 50.0%
CTTACCTCCTAACCGAACTC+CGG - chr4.2:9254268-9254287 None:intergenic 50.0%
GCTCAAAACAGTGGCAGAGT+TGG - chr4.2:9253774-9253793 None:intergenic 50.0%
GCTTCAGAGATCTTCCAACC+TGG - chr4.2:9253908-9253927 None:intergenic 50.0%
GGTTTGCGGCTATGTGATTG+TGG + chr4.2:9253176-9253195 MS.gene030631:intron 50.0%
TAATCCGGAGTTCGGTTAGG+AGG + chr4.2:9254261-9254280 MS.gene030631:intron 50.0%
TGAGTCAGGATTGCAGCCAT+TGG + chr4.2:9254703-9254722 MS.gene030631:CDS 50.0%
TGGCTGCAATCCTGACTCAA+TGG - chr4.2:9254702-9254721 None:intergenic 50.0%
TGGGAATACCTCCAGTGAGA+TGG - chr4.2:9254041-9254060 None:intergenic 50.0%
TGGGAATCCATATCGTGCAC+GGG + chr4.2:9254180-9254199 MS.gene030631:intron 50.0%
TGGTAATCCGGAGTTCGGTT+AGG + chr4.2:9254258-9254277 MS.gene030631:intron 50.0%
TTCCACATATCAGGCACTCC+AGG - chr4.2:9254735-9254754 None:intergenic 50.0%
TTTCTTGGTACAGCAGCGTC+CGG + chr4.2:9252966-9252985 MS.gene030631:CDS 50.0%
! CTTGGTGCATGTTCATGAGC+CGG - chr4.2:9252988-9253007 None:intergenic 50.0%
! CTTTCTAGGAGGGTCCTGAT+AGG - chr4.2:9253702-9253721 None:intergenic 50.0%
! CTTTTGAGCCATCTCACTGG+AGG + chr4.2:9254030-9254049 MS.gene030631:CDS 50.0%
! GGACTTTTGAGCCATCTCAC+TGG + chr4.2:9254027-9254046 MS.gene030631:CDS 50.0%
! TACCTGGAGTGCCTGATATG+TGG + chr4.2:9254730-9254749 MS.gene030631:CDS 50.0%
!! AGCCAGTAGCGTTTGGTTTG+CGG + chr4.2:9253162-9253181 MS.gene030631:intron 50.0%
!! CGCTTTGAAACCTTGCTTGC+TGG + chr4.2:9254392-9254411 MS.gene030631:intron 50.0%
AGACCATGTCCTCGCGATTG+GGG - chr4.2:9253202-9253221 None:intergenic 55.0%
AGCCGCAAACCAAACGCTAC+TGG - chr4.2:9253167-9253186 None:intergenic 55.0%
CCAACATGTGCATCACTGCG+AGG - chr4.2:9254663-9254682 None:intergenic 55.0%
CCTCGCAGTGATGCACATGT+TGG + chr4.2:9254660-9254679 MS.gene030631:CDS 55.0%
CGGCTCATGAACATGCACCA+AGG + chr4.2:9252986-9253005 MS.gene030631:CDS 55.0%
GCACTCCAGGTAGACACCAA+TGG - chr4.2:9254722-9254741 None:intergenic 55.0%
GCTGCAGTGATGATACCCGT+AGG + chr4.2:9254502-9254521 MS.gene030631:intron 55.0%
GGGTCTGGTAATCCGGAGTT+CGG + chr4.2:9254253-9254272 MS.gene030631:intron 55.0%
! GAAGGCGTAACCAGCAAGCA+AGG - chr4.2:9254405-9254424 None:intergenic 55.0%
! TGCAGCCATTGGTGTCTACC+TGG + chr4.2:9254714-9254733 MS.gene030631:CDS 55.0%
CAGGACCCTCCTAGAAAGGG+TGG + chr4.2:9253704-9253723 MS.gene030631:intron 60.0%
GCAAGGGGGGTCTGGTAATC+CGG + chr4.2:9254246-9254265 MS.gene030631:intron 60.0%
TCTTCACCCTCCGGTTCCCA+GGG + chr4.2:9254224-9254243 MS.gene030631:intron 60.0%
TGATTGTGGCCCCAATCGCG+AGG + chr4.2:9253190-9253209 MS.gene030631:intron 60.0%
GTCTTCACCCTCCGGTTCCC+AGG + chr4.2:9254223-9254242 MS.gene030631:intron 65.0%
TACCAGACCCCCCTTGCCCT+GGG - chr4.2:9254243-9254262 None:intergenic 65.0%
TGGCCCCAATCGCGAGGACA+TGG + chr4.2:9253196-9253215 MS.gene030631:intron 65.0%
TTACCAGACCCCCCTTGCCC+TGG - chr4.2:9254244-9254263 None:intergenic 65.0%
ACCCCCCTTGCCCTGGGAAC+CGG - chr4.2:9254237-9254256 None:intergenic 70.0%
ACCCTCCGGTTCCCAGGGCA+AGG + chr4.2:9254229-9254248 MS.gene030631:intron 70.0%
CCCTCCGGTTCCCAGGGCAA+GGG + chr4.2:9254230-9254249 MS.gene030631:intron 70.0%
CCCTTGCCCTGGGAACCGGA+GGG - chr4.2:9254233-9254252 None:intergenic 70.0%
CCTCCGGTTCCCAGGGCAAG+GGG + chr4.2:9254231-9254250 MS.gene030631:intron 70.0%
CTCCGGTTCCCAGGGCAAGG+GGG + chr4.2:9254232-9254251 MS.gene030631:intron 70.0%
TCCGGTTCCCAGGGCAAGGG+GGG + chr4.2:9254233-9254252 MS.gene030631:intron 70.0%
TTCCCAGGGCAAGGGGGGTC+TGG + chr4.2:9254238-9254257 MS.gene030631:intron 70.0%
CCCCTTGCCCTGGGAACCGG+AGG - chr4.2:9254234-9254253 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 9252301 9254985 9252301 ID=MS.gene030631
chr4.2 mRNA 9252301 9254985 9252301 ID=MS.gene030631.t1;Parent=MS.gene030631
chr4.2 exon 9252301 9253127 9252301 ID=MS.gene030631.t1.exon1;Parent=MS.gene030631.t1
chr4.2 CDS 9252301 9253127 9252301 ID=cds.MS.gene030631.t1;Parent=MS.gene030631.t1
chr4.2 exon 9253893 9254051 9253893 ID=MS.gene030631.t1.exon2;Parent=MS.gene030631.t1
chr4.2 CDS 9253893 9254051 9253893 ID=cds.MS.gene030631.t1;Parent=MS.gene030631.t1
chr4.2 exon 9254509 9254820 9254509 ID=MS.gene030631.t1.exon3;Parent=MS.gene030631.t1
chr4.2 CDS 9254509 9254820 9254509 ID=cds.MS.gene030631.t1;Parent=MS.gene030631.t1
chr4.2 exon 9254973 9254985 9254973 ID=MS.gene030631.t1.exon4;Parent=MS.gene030631.t1
chr4.2 CDS 9254973 9254985 9254973 ID=cds.MS.gene030631.t1;Parent=MS.gene030631.t1
Gene Sequence

>MS.gene030631

ATGAGTGGTTCACATTTGAATAAAAGCATTTCCTTCAACAGAAGATCTCATTCTCAACCTCTTGGTAGTCCCAAACCAATTATCAACCGCTTTGGATGTGTTTCTTTGAGGTTTCAAGTTCTTGTTATCATTGCTTCTGTTTTTTCCTTCTTTATAGCAATTGGTGGTGGTTACATCTATGTTCTTCCTAGTATCACACATGCTTTTTTTAATGGACAAGGTTTCTTTTCTGATCATAACAATAACAATAACAATAATTCGTTGTTGAGAAAATGTGATGTTTTTGATGGAACATGGGTTCAAGTATCTGGTTATCCTTTGTATAATGCAACTGAGTGTCCTTTTGTTGAACAAGGATTTGATTGTTTAGGAAATGGAAGAAGTGATTTGGATTTTCTTTCATGGAGGTGGAAACCTAAGAGTTGTGAAATTCCAACTTTTGATGTTGGTGCTGTTTTGGAAATGTTGAGGAGTAAAAGGGTTGTTTTTGTTGGTGATTCAATGAGTAGAACTCAATGGGAGTCTTTGATTTGTATGTTGATGACTGGTGTGGAGGATAAGACGAGTGTTTATGAAGTGAATCAGAATCAGATTACAAAGAGGATTAGGTTTTTAGGAGTTAGGTTTAGTGATTTCAATTTTACAATTGAATTTTTTCGATCTGTTTTCTTGGTACAGCAGCGTCCGGCTCATGAACATGCACCAAGGAGGGTTAAATCAACACTTTTGTTAGACAAGTTAGATGATATAAGTCATCAATGGATTGATTCAGATATTCTTATATTCAATACTGGTCACTGGTGGGTGCCATCTAAGCTTTTCCACACGTAAGGTTCCATTCTTTTCAATATTTCAACTGTAAGCCAGTAGCGTTTGGTTTGCGGCTATGTGATTGTGGCCCCAATCGCGAGGACATGGTCTTTGATTTGATGTATATGTGACCACAACTCAATTGTGTTTGAGTTGCATCAGCCATATTTGCTGTTGTTAATTTTAATGTTATTCATTGCCATACTCTTCAGTCTTCATATTTCTTGCTAATTTGTTTATCAGTAGGTTTAAGGGGGGAAAACTTTTCATCGAGTTTTCGTAACTGTTGACTTAGTAGTTCACAACATCCATTGTTCTCGTATTAGGTTCTCCGTCATGATATTGAAGTTCGTGATTATTATTTAAGAGAAAGACTATAAGGGTAGTTTTAGAGTTAATATAACAGGTGATGCGTGAGCTCCCAAAACATTTGACCGAAAGGCTGTTTTTTTATGTTAAACTAAGTATTTCTCAAGAGATTGTTGTCGTGATTCTTTCCTTGCCACTGCTTGAAAATCAAGATGATAGACACTTAAATTTTGGTCTTCTGATTTATGCTCGCTTGGATCTTTTTGTTTGTTAATGAGGCCTATCAGGACCCTCCTAGAAAGGGTGGACATAGTGATGTTTTGTTTTTCATTCTGACTCTAACTTGAGAAACCAACTCTGCCACTGTTTTGAGCAAGTATAATCACCCTTAACAAATCTGTGTTTTCATATTCTGGAATCTATTTTTGTTTTTGGATTATTGTGTCAAATGATCCTCTTCTTGCATTCAACAGGGGTTGTTATTTCCAGGTTGGAAGATCTCTGAAGCTTGGGATGTCAATTCCTGCCGCCTATAAAATAGCACTCAAAACTTGGACTTCATGGATTGAGAGAAAGATTGATAAAAATAGAACACGCGTCTTTTTTAGGACTTTTGAGCCATCTCACTGGAGGTATTCCCACATTATGGATAACATGATGCTTTATTTACATGTGCTTAGCTTTCATTATATAATATTTTAAAATGATACTTCAAAATTCAAACTATCCTTACACGTAGCAAGCATGCATTCCCTAGTTTTGGGAATCCATATCGTGCACGGGATTCTCTTAACTTTTTTTTTGTCTTCACCCTCCGGTTCCCAGGGCAAGGGGGGTCTGGTAATCCGGAGTTCGGTTAGGAGGTAAGTAAAGTCTTGCCAATAATTGTTCAAGTCAGGATTCAAATTCAGGTTCTCCTGATCGTTTTGACCTTGACTAAAGTTCATTAACCACTTGGTTGGATTCTATAAGCGCTTTGAAACCTTGCTTGCTGGTTACGCCTTCTTTATAACAATATTTTCTTGTAACATAACATATGCTTATTTCATTGTTCAACAATTATTCATCTAGCTTTTATGTTTGCTGCAGTGATGATACCCGTAGGACTTGCAATGTAACCCAGTTCCCCACTTTTGAGACTAATGCAACGGAACAAAACTCGTTTTCAGACACAGTGTTGGAAGTTGTAAAGAATGTTAATTTTCCTATAAACGTTCTCCATGTTACATCTATGTCGGCTCCTCGCAGTGATGCACATGTTGGTAACTGGAATGATAATCCATTGAGTCAGGATTGCAGCCATTGGTGTCTACCTGGAGTGCCTGATATGTGGAATGAAATTATCCTGTCCCAACTTTTTACTGAATATGAAATCCCTTTTTCAGAAAATGAACCTACACAGTAAGTTCAGCTTCTTTCAAAATATCCAACTATTAAAAGACTGAGAACTCTGCCAAAAAAGAGAGATAAAGAGTACTTTTCTTTTACTTTCAGATGCATCATTTTAAAAAAAAATGAACTACATCTAACACATTTTCTATTTCTGGATGCAGATTAGATGACTAA
Protein sequence

>MS.gene030631.t1

MSGSHLNKSISFNRRSHSQPLGSPKPIINRFGCVSLRFQVLVIIASVFSFFIAIGGGYIYVLPSITHAFFNGQGFFSDHNNNNNNNSLLRKCDVFDGTWVQVSGYPLYNATECPFVEQGFDCLGNGRSDLDFLSWRWKPKSCEIPTFDVGAVLEMLRSKRVVFVGDSMSRTQWESLICMLMTGVEDKTSVYEVNQNQITKRIRFLGVRFSDFNFTIEFFRSVFLVQQRPAHEHAPRRVKSTLLLDKLDDISHQWIDSDILIFNTGHWWVPSKLFHTGCYFQVGRSLKLGMSIPAAYKIALKTWTSWIERKIDKNRTRVFFRTFEPSHWSDDTRRTCNVTQFPTFETNATEQNSFSDTVLEVVKNVNFPINVLHVTSMSAPRSDAHVGNWNDNPLSQDCSHWCLPGVPDMWNEIILSQLFTEYEIPFSENEPTQLDD