Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031453.t1 | RHN75081.1 | 94.4 | 360 | 19 | 1 | 1 | 360 | 1 | 359 | 1.90E-199 | 704.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031453.t1 | Q9FJ45 | 44.9 | 374 | 179 | 10 | 1 | 351 | 1 | 370 | 6.2e-82 | 305.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031453.t1 | A0A396JEK6 | 94.4 | 360 | 19 | 1 | 1 | 360 | 1 | 359 | 1.4e-199 | 704.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene031453 | MS.gene54326 | PPI |
| MS.gene031453 | MS.gene002554 | PPI |
| MS.gene031453 | MS.gene004228 | PPI |
| MS.gene031453 | MS.gene54327 | PPI |
| MS.gene031453 | MS.gene54325 | PPI |
| MS.gene01536 | MS.gene031453 | PPI |
| MS.gene031453 | MS.gene002555 | PPI |
| MS.gene031453 | MS.gene004227 | PPI |
| MS.gene031453 | MS.gene01535 | PPI |
| MS.gene031453 | MS.gene002553 | PPI |
| MS.gene031453 | MS.gene004229 | PPI |
| MS.gene01537 | MS.gene031453 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031453.t1 | MTR_0029s0050 | 93.333 | 360 | 23 | 1 | 1 | 360 | 1 | 359 | 0.0 | 694 |
| MS.gene031453.t1 | MTR_2g079090 | 93.889 | 360 | 21 | 1 | 1 | 360 | 1 | 359 | 0.0 | 692 |
| MS.gene031453.t1 | MTR_2g079080 | 93.333 | 360 | 23 | 1 | 1 | 360 | 1 | 359 | 0.0 | 688 |
| MS.gene031453.t1 | MTR_0029s0100 | 92.778 | 360 | 25 | 1 | 1 | 360 | 1 | 359 | 0.0 | 687 |
| MS.gene031453.t1 | MTR_3g448360 | 70.241 | 373 | 94 | 7 | 1 | 359 | 1 | 370 | 0.0 | 512 |
| MS.gene031453.t1 | MTR_3g069780 | 69.867 | 375 | 94 | 8 | 1 | 360 | 1 | 371 | 1.41e-178 | 500 |
| MS.gene031453.t1 | MTR_3g438030 | 69.600 | 375 | 95 | 8 | 1 | 360 | 1 | 371 | 2.43e-178 | 499 |
| MS.gene031453.t1 | MTR_3g463960 | 64.249 | 386 | 109 | 6 | 3 | 360 | 4 | 388 | 2.08e-173 | 488 |
| MS.gene031453.t1 | MTR_3g463950 | 64.249 | 386 | 109 | 6 | 3 | 360 | 4 | 388 | 2.08e-173 | 488 |
| MS.gene031453.t1 | MTR_3g463970 | 64.249 | 386 | 109 | 6 | 3 | 360 | 4 | 388 | 2.08e-173 | 488 |
| MS.gene031453.t1 | MTR_3g463940 | 64.249 | 386 | 109 | 6 | 3 | 360 | 4 | 388 | 2.08e-173 | 488 |
| MS.gene031453.t1 | MTR_3g069520 | 67.112 | 374 | 104 | 7 | 1 | 360 | 1 | 369 | 1.13e-172 | 485 |
| MS.gene031453.t1 | MTR_3g463930 | 62.850 | 393 | 110 | 7 | 3 | 360 | 4 | 395 | 2.81e-167 | 472 |
| MS.gene031453.t1 | MTR_2g043980 | 61.157 | 363 | 130 | 7 | 1 | 360 | 7 | 361 | 1.40e-149 | 426 |
| MS.gene031453.t1 | MTR_2g015650 | 51.213 | 371 | 162 | 6 | 6 | 360 | 7 | 374 | 5.54e-122 | 357 |
| MS.gene031453.t1 | MTR_2g015670 | 47.514 | 362 | 157 | 7 | 15 | 360 | 16 | 360 | 6.71e-107 | 318 |
| MS.gene031453.t1 | MTR_2g015630 | 47.230 | 343 | 156 | 8 | 35 | 357 | 36 | 373 | 1.25e-96 | 292 |
| MS.gene031453.t1 | MTR_2g043990 | 54.054 | 296 | 106 | 7 | 1 | 293 | 69 | 337 | 3.03e-95 | 287 |
| MS.gene031453.t1 | MTR_2g015580 | 44.058 | 345 | 170 | 8 | 27 | 353 | 44 | 383 | 4.13e-91 | 279 |
| MS.gene031453.t1 | MTR_2g015590 | 42.816 | 348 | 181 | 7 | 19 | 350 | 20 | 365 | 6.49e-87 | 267 |
| MS.gene031453.t1 | MTR_4g104240 | 34.946 | 372 | 211 | 10 | 1 | 350 | 5 | 367 | 2.45e-67 | 217 |
| MS.gene031453.t1 | MTR_2g015590 | 42.349 | 281 | 156 | 5 | 19 | 294 | 20 | 299 | 1.37e-64 | 209 |
| MS.gene031453.t1 | MTR_3g466240 | 52.113 | 213 | 64 | 5 | 102 | 307 | 2 | 183 | 9.08e-60 | 191 |
| MS.gene031453.t1 | MTR_8g028160 | 32.804 | 378 | 209 | 14 | 5 | 350 | 10 | 374 | 2.06e-51 | 176 |
| MS.gene031453.t1 | MTR_1g030268 | 34.648 | 355 | 188 | 12 | 28 | 353 | 38 | 377 | 2.22e-50 | 173 |
| MS.gene031453.t1 | MTR_7g087190 | 31.152 | 382 | 217 | 15 | 5 | 352 | 16 | 385 | 2.68e-49 | 170 |
| MS.gene031453.t1 | MTR_1g030220 | 32.275 | 378 | 211 | 13 | 7 | 353 | 16 | 379 | 3.09e-49 | 170 |
| MS.gene031453.t1 | MTR_1g030340 | 32.124 | 386 | 203 | 14 | 4 | 352 | 18 | 381 | 2.59e-48 | 167 |
| MS.gene031453.t1 | MTR_7g116870 | 34.000 | 350 | 191 | 11 | 28 | 350 | 31 | 367 | 3.34e-48 | 167 |
| MS.gene031453.t1 | MTR_3g466190 | 56.287 | 167 | 50 | 7 | 57 | 222 | 7 | 151 | 3.39e-48 | 162 |
| MS.gene031453.t1 | MTR_3g466190 | 57.692 | 78 | 23 | 1 | 293 | 360 | 152 | 229 | 8.88e-21 | 90.1 |
| MS.gene031453.t1 | MTR_8g089805 | 32.787 | 366 | 199 | 13 | 20 | 352 | 30 | 381 | 1.89e-47 | 166 |
| MS.gene031453.t1 | MTR_1g030275 | 33.898 | 354 | 190 | 12 | 28 | 352 | 37 | 375 | 1.02e-46 | 163 |
| MS.gene031453.t1 | MTR_6g007090 | 31.267 | 371 | 227 | 10 | 1 | 350 | 7 | 370 | 1.27e-44 | 157 |
| MS.gene031453.t1 | MTR_1g082390 | 31.025 | 361 | 213 | 9 | 19 | 353 | 20 | 370 | 1.90e-44 | 157 |
| MS.gene031453.t1 | MTR_7g033165 | 32.000 | 350 | 205 | 8 | 27 | 351 | 30 | 371 | 4.29e-44 | 156 |
| MS.gene031453.t1 | MTR_7g113860 | 30.026 | 383 | 215 | 11 | 2 | 350 | 9 | 372 | 4.67e-44 | 156 |
| MS.gene031453.t1 | MTR_1g030230 | 32.320 | 362 | 203 | 12 | 20 | 352 | 22 | 370 | 5.91e-43 | 153 |
| MS.gene031453.t1 | MTR_7g113860 | 31.198 | 359 | 196 | 10 | 26 | 350 | 25 | 366 | 3.20e-42 | 151 |
| MS.gene031453.t1 | MTR_7g033150 | 31.088 | 386 | 215 | 14 | 4 | 352 | 7 | 378 | 5.44e-42 | 151 |
| MS.gene031453.t1 | MTR_7g033155 | 30.319 | 376 | 204 | 13 | 22 | 352 | 30 | 392 | 3.95e-40 | 146 |
| MS.gene031453.t1 | MTR_6g007095 | 30.851 | 376 | 224 | 12 | 1 | 350 | 7 | 372 | 5.49e-40 | 150 |
| MS.gene031453.t1 | MTR_6g007095 | 28.808 | 302 | 205 | 6 | 56 | 352 | 394 | 690 | 3.79e-30 | 122 |
| MS.gene031453.t1 | MTR_7g111780 | 29.762 | 336 | 206 | 9 | 32 | 352 | 38 | 358 | 1.31e-38 | 141 |
| MS.gene031453.t1 | MTR_6g007100 | 30.387 | 362 | 225 | 11 | 1 | 350 | 7 | 353 | 9.78e-37 | 136 |
| MS.gene031453.t1 | MTR_8g038680 | 30.263 | 380 | 219 | 14 | 1 | 350 | 1 | 364 | 2.44e-36 | 135 |
| MS.gene031453.t1 | MTR_1g030268 | 35.395 | 291 | 159 | 12 | 28 | 303 | 38 | 314 | 1.02e-35 | 133 |
| MS.gene031453.t1 | MTR_1g030265 | 30.565 | 301 | 171 | 9 | 80 | 352 | 53 | 343 | 1.25e-32 | 125 |
| MS.gene031453.t1 | MTR_8g022810 | 28.402 | 338 | 200 | 10 | 27 | 342 | 38 | 355 | 4.50e-32 | 124 |
| MS.gene031453.t1 | MTR_7g033165 | 32.700 | 263 | 162 | 5 | 27 | 280 | 30 | 286 | 1.03e-31 | 122 |
| MS.gene031453.t1 | MTR_8g031420 | 27.346 | 373 | 222 | 14 | 4 | 355 | 10 | 354 | 2.79e-30 | 119 |
| MS.gene031453.t1 | MTR_2g033930 | 29.819 | 332 | 201 | 11 | 30 | 345 | 32 | 347 | 1.85e-29 | 117 |
| MS.gene031453.t1 | MTR_1g025780 | 29.254 | 335 | 196 | 13 | 30 | 344 | 41 | 354 | 4.03e-29 | 115 |
| MS.gene031453.t1 | MTR_8g031390 | 27.954 | 347 | 211 | 13 | 25 | 355 | 32 | 355 | 4.71e-29 | 115 |
| MS.gene031453.t1 | MTR_2g015080 | 30.000 | 330 | 193 | 14 | 30 | 335 | 38 | 353 | 1.24e-28 | 114 |
| MS.gene031453.t1 | MTR_8g031430 | 29.268 | 369 | 219 | 15 | 7 | 355 | 10 | 356 | 1.83e-28 | 114 |
| MS.gene031453.t1 | MTR_4g056280 | 29.155 | 343 | 205 | 13 | 20 | 343 | 21 | 344 | 4.55e-28 | 112 |
| MS.gene031453.t1 | MTR_8g079050 | 28.378 | 370 | 220 | 13 | 2 | 345 | 10 | 360 | 8.45e-28 | 112 |
| MS.gene031453.t1 | MTR_4g056160 | 28.012 | 332 | 207 | 10 | 30 | 343 | 27 | 344 | 1.59e-27 | 111 |
| MS.gene031453.t1 | MTR_8g089805 | 28.428 | 299 | 173 | 11 | 85 | 352 | 25 | 313 | 3.58e-27 | 109 |
| MS.gene031453.t1 | MTR_5g022630 | 28.090 | 356 | 222 | 12 | 1 | 338 | 15 | 354 | 5.39e-27 | 110 |
| MS.gene031453.t1 | MTR_3g005660 | 27.586 | 377 | 228 | 16 | 7 | 356 | 4 | 362 | 2.25e-26 | 108 |
| MS.gene031453.t1 | MTR_5g022640 | 28.099 | 363 | 224 | 12 | 1 | 344 | 15 | 359 | 7.93e-26 | 107 |
| MS.gene031453.t1 | MTR_2g100620 | 27.246 | 334 | 205 | 13 | 30 | 343 | 31 | 346 | 9.69e-26 | 106 |
| MS.gene031453.t1 | MTR_7g113860 | 27.036 | 307 | 174 | 9 | 78 | 350 | 8 | 298 | 1.01e-25 | 105 |
| MS.gene031453.t1 | MTR_8g014910 | 27.119 | 354 | 212 | 14 | 11 | 343 | 19 | 347 | 1.49e-25 | 105 |
| MS.gene031453.t1 | MTR_3g082830 | 28.152 | 341 | 204 | 12 | 30 | 349 | 38 | 358 | 3.56e-25 | 105 |
| MS.gene031453.t1 | MTR_5g009100 | 27.327 | 333 | 205 | 12 | 32 | 345 | 48 | 362 | 3.76e-25 | 105 |
| MS.gene031453.t1 | MTR_2g033920 | 29.586 | 338 | 198 | 12 | 29 | 345 | 34 | 352 | 3.76e-25 | 105 |
| MS.gene031453.t1 | MTR_2g044100 | 29.060 | 351 | 202 | 13 | 23 | 348 | 36 | 364 | 4.85e-25 | 105 |
| MS.gene031453.t1 | MTR_1g025680 | 29.970 | 337 | 201 | 12 | 26 | 344 | 30 | 349 | 5.75e-25 | 105 |
| MS.gene031453.t1 | MTR_3g464730 | 27.913 | 369 | 213 | 15 | 1 | 344 | 4 | 344 | 9.83e-25 | 103 |
| MS.gene031453.t1 | MTR_1g025700 | 29.155 | 367 | 217 | 16 | 2 | 344 | 17 | 364 | 1.03e-24 | 103 |
| MS.gene031453.t1 | MTR_1g025720 | 29.254 | 335 | 193 | 14 | 27 | 339 | 34 | 346 | 1.07e-24 | 103 |
| MS.gene031453.t1 | MTR_8g031400 | 29.301 | 372 | 218 | 17 | 4 | 355 | 10 | 356 | 2.64e-24 | 102 |
| MS.gene031453.t1 | MTR_8g031390 | 28.671 | 286 | 180 | 10 | 25 | 306 | 32 | 297 | 3.34e-24 | 101 |
| MS.gene031453.t1 | MTR_3g098270 | 28.080 | 349 | 212 | 13 | 28 | 356 | 32 | 361 | 5.14e-24 | 102 |
| MS.gene031453.t1 | MTR_8g012540 | 29.560 | 318 | 199 | 11 | 1 | 306 | 1 | 305 | 1.56e-23 | 100 |
| MS.gene031453.t1 | MTR_7g111780 | 27.985 | 268 | 158 | 9 | 103 | 352 | 9 | 259 | 1.95e-23 | 98.2 |
| MS.gene031453.t1 | MTR_5g078210 | 27.198 | 364 | 225 | 15 | 1 | 347 | 1 | 341 | 4.08e-23 | 99.0 |
| MS.gene031453.t1 | MTR_4g087985 | 29.096 | 354 | 208 | 17 | 6 | 335 | 15 | 349 | 6.95e-23 | 98.6 |
| MS.gene031453.t1 | MTR_3g052490 | 27.568 | 370 | 212 | 15 | 3 | 346 | 12 | 351 | 7.30e-23 | 98.6 |
| MS.gene031453.t1 | MTR_1g025760 | 27.596 | 366 | 218 | 13 | 3 | 344 | 53 | 395 | 1.26e-22 | 98.2 |
| MS.gene031453.t1 | MTR_3g005650 | 27.301 | 326 | 203 | 11 | 30 | 340 | 30 | 336 | 3.24e-22 | 96.7 |
| MS.gene031453.t1 | MTR_5g074270 | 27.954 | 347 | 205 | 13 | 20 | 340 | 19 | 346 | 4.96e-22 | 96.3 |
| MS.gene031453.t1 | MTR_5g084790 | 27.844 | 334 | 204 | 12 | 30 | 344 | 32 | 347 | 1.83e-21 | 94.4 |
| MS.gene031453.t1 | MTR_3g435540 | 27.246 | 334 | 202 | 13 | 32 | 344 | 25 | 338 | 4.41e-21 | 93.6 |
| MS.gene031453.t1 | MTR_5g084750 | 27.434 | 339 | 207 | 12 | 30 | 348 | 30 | 349 | 5.13e-21 | 93.2 |
| MS.gene031453.t1 | MTR_8g087890 | 25.905 | 359 | 223 | 16 | 1 | 340 | 7 | 341 | 8.52e-21 | 92.8 |
| MS.gene031453.t1 | MTR_4g035353 | 26.087 | 345 | 224 | 12 | 18 | 346 | 19 | 348 | 1.21e-20 | 92.4 |
| MS.gene031453.t1 | MTR_5g093090 | 26.829 | 369 | 210 | 15 | 4 | 345 | 11 | 346 | 1.38e-20 | 92.0 |
| MS.gene031453.t1 | MTR_4g122200 | 26.409 | 337 | 208 | 10 | 30 | 345 | 35 | 352 | 1.43e-20 | 92.0 |
| MS.gene031453.t1 | MTR_0009s0250 | 27.246 | 345 | 196 | 15 | 30 | 351 | 33 | 345 | 1.76e-20 | 91.7 |
| MS.gene031453.t1 | MTR_5g084770 | 26.446 | 363 | 224 | 12 | 2 | 343 | 3 | 343 | 2.05e-20 | 91.3 |
| MS.gene031453.t1 | MTR_8g022790 | 26.506 | 332 | 215 | 12 | 25 | 345 | 32 | 345 | 2.96e-20 | 91.3 |
| MS.gene031453.t1 | MTR_8g075230 | 26.857 | 350 | 219 | 12 | 16 | 344 | 18 | 351 | 3.05e-20 | 90.9 |
| MS.gene031453.t1 | MTR_5g078210 | 27.350 | 351 | 211 | 15 | 1 | 340 | 1 | 318 | 5.42e-20 | 89.7 |
| MS.gene031453.t1 | MTR_3g052580 | 27.100 | 369 | 213 | 15 | 3 | 346 | 9 | 346 | 7.67e-20 | 90.1 |
| MS.gene031453.t1 | MTR_3g052580 | 27.100 | 369 | 213 | 15 | 3 | 346 | 8 | 345 | 7.75e-20 | 90.5 |
| MS.gene031453.t1 | MTR_3g052480 | 27.824 | 363 | 211 | 16 | 8 | 346 | 18 | 353 | 9.52e-20 | 89.7 |
| MS.gene031453.t1 | MTR_3g114090 | 27.729 | 339 | 206 | 13 | 26 | 344 | 32 | 351 | 1.13e-19 | 89.4 |
| MS.gene031453.t1 | MTR_4g019880 | 26.849 | 365 | 220 | 14 | 2 | 345 | 12 | 350 | 1.36e-19 | 89.4 |
| MS.gene031453.t1 | MTR_3g021460 | 25.419 | 358 | 231 | 13 | 1 | 345 | 1 | 335 | 1.61e-19 | 89.0 |
| MS.gene031453.t1 | MTR_3g024510 | 24.923 | 325 | 214 | 10 | 31 | 340 | 39 | 348 | 2.17e-19 | 88.6 |
| MS.gene031453.t1 | MTR_0565s0010 | 24.695 | 328 | 212 | 13 | 31 | 340 | 33 | 343 | 2.22e-19 | 88.6 |
| MS.gene031453.t1 | MTR_8g022810 | 30.952 | 210 | 123 | 6 | 27 | 226 | 38 | 235 | 3.38e-19 | 87.4 |
| MS.gene031453.t1 | MTR_1g025910 | 27.950 | 322 | 191 | 14 | 35 | 336 | 41 | 341 | 3.55e-19 | 88.2 |
| MS.gene031453.t1 | MTR_1g069175 | 25.145 | 346 | 224 | 11 | 19 | 345 | 22 | 351 | 9.46e-19 | 87.0 |
| MS.gene031453.t1 | MTR_2g084585 | 26.111 | 360 | 230 | 13 | 2 | 343 | 3 | 344 | 1.53e-18 | 85.9 |
| MS.gene031453.t1 | MTR_7g116570 | 24.468 | 376 | 230 | 16 | 4 | 350 | 7 | 357 | 1.93e-18 | 85.9 |
| MS.gene031453.t1 | MTR_2g461580 | 26.536 | 358 | 227 | 14 | 1 | 345 | 1 | 335 | 4.58e-18 | 84.7 |
| MS.gene031453.t1 | MTR_6g021530 | 25.872 | 344 | 215 | 13 | 29 | 350 | 28 | 353 | 5.28e-18 | 84.7 |
| MS.gene031453.t1 | MTR_8g075200 | 26.790 | 377 | 221 | 14 | 1 | 344 | 2 | 356 | 5.87e-18 | 84.7 |
| MS.gene031453.t1 | MTR_1g060490 | 27.246 | 334 | 184 | 15 | 29 | 338 | 36 | 334 | 8.94e-18 | 84.0 |
| MS.gene031453.t1 | MTR_3g023220 | 26.822 | 343 | 203 | 12 | 31 | 356 | 34 | 345 | 2.31e-17 | 82.8 |
| MS.gene031453.t1 | MTR_5g087690 | 25.000 | 356 | 226 | 12 | 18 | 355 | 37 | 369 | 2.36e-17 | 82.8 |
| MS.gene031453.t1 | MTR_1g024890 | 27.083 | 336 | 208 | 13 | 29 | 345 | 31 | 348 | 2.68e-17 | 82.4 |
| MS.gene031453.t1 | MTR_2g033920 | 28.322 | 286 | 175 | 9 | 29 | 301 | 34 | 302 | 4.67e-17 | 81.3 |
| MS.gene031453.t1 | MTR_7g116500 | 24.324 | 333 | 221 | 9 | 29 | 345 | 32 | 349 | 1.10e-16 | 80.9 |
| MS.gene031453.t1 | MTR_8g075220 | 24.933 | 373 | 238 | 11 | 1 | 344 | 1 | 360 | 1.79e-16 | 80.1 |
| MS.gene031453.t1 | MTR_2g017965 | 25.501 | 349 | 219 | 15 | 8 | 339 | 13 | 337 | 8.47e-16 | 78.2 |
| MS.gene031453.t1 | MTR_1g079530 | 26.627 | 338 | 205 | 14 | 27 | 345 | 26 | 339 | 9.91e-16 | 77.8 |
| MS.gene031453.t1 | MTR_1g079540 | 25.075 | 335 | 216 | 10 | 29 | 345 | 30 | 347 | 2.35e-15 | 77.0 |
| MS.gene031453.t1 | MTR_3g114120 | 29.970 | 337 | 183 | 19 | 30 | 339 | 47 | 357 | 2.68e-15 | 76.6 |
| MS.gene031453.t1 | MTR_1g092750 | 26.113 | 337 | 193 | 17 | 31 | 342 | 41 | 346 | 8.78e-15 | 75.1 |
| MS.gene031453.t1 | MTR_2g017875 | 26.934 | 349 | 202 | 16 | 31 | 356 | 35 | 353 | 1.58e-14 | 74.3 |
| MS.gene031453.t1 | MTR_5g093090 | 26.452 | 310 | 179 | 13 | 4 | 294 | 11 | 290 | 1.20e-13 | 71.2 |
| MS.gene031453.t1 | MTR_7g008060 | 22.500 | 360 | 231 | 13 | 4 | 345 | 7 | 336 | 3.05e-13 | 70.5 |
| MS.gene031453.t1 | MTR_8g087870 | 26.627 | 338 | 212 | 14 | 31 | 356 | 30 | 343 | 3.08e-13 | 70.5 |
| MS.gene031453.t1 | MTR_1g092760 | 24.633 | 341 | 192 | 18 | 31 | 342 | 40 | 344 | 1.28e-12 | 68.6 |
| MS.gene031453.t1 | MTR_1108s0010 | 32.215 | 149 | 85 | 3 | 208 | 348 | 68 | 208 | 2.27e-12 | 66.2 |
| MS.gene031453.t1 | MTR_2g017925 | 24.928 | 349 | 220 | 13 | 6 | 339 | 11 | 332 | 5.97e-12 | 66.6 |
| MS.gene031453.t1 | MTR_8g074570 | 25.000 | 360 | 232 | 15 | 6 | 345 | 15 | 356 | 6.02e-12 | 66.6 |
| MS.gene031453.t1 | MTR_2g017915 | 26.316 | 342 | 190 | 16 | 32 | 356 | 35 | 331 | 4.65e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031453.t1 | AT5G45910 | 44.920 | 374 | 179 | 10 | 1 | 351 | 1 | 370 | 9.92e-100 | 300 |
| MS.gene031453.t1 | AT1G28610 | 43.909 | 353 | 179 | 6 | 15 | 351 | 16 | 365 | 5.94e-91 | 278 |
| MS.gene031453.t1 | AT1G28590 | 42.135 | 356 | 186 | 7 | 15 | 353 | 21 | 373 | 1.60e-86 | 267 |
| MS.gene031453.t1 | AT1G28570 | 40.833 | 360 | 195 | 6 | 7 | 350 | 11 | 368 | 3.66e-86 | 266 |
| MS.gene031453.t1 | AT1G28600 | 41.530 | 366 | 184 | 10 | 3 | 350 | 11 | 364 | 2.48e-85 | 264 |
| MS.gene031453.t1 | AT1G28580 | 40.331 | 362 | 196 | 7 | 6 | 350 | 13 | 371 | 2.68e-83 | 258 |
| MS.gene031453.t1 | AT2G27360 | 40.548 | 365 | 195 | 7 | 3 | 350 | 9 | 368 | 2.92e-83 | 258 |
| MS.gene031453.t1 | AT1G31550 | 40.599 | 367 | 194 | 9 | 1 | 350 | 10 | 369 | 7.39e-81 | 252 |
| MS.gene031453.t1 | AT1G28670 | 39.542 | 349 | 192 | 6 | 21 | 352 | 26 | 372 | 9.58e-79 | 246 |
| MS.gene031453.t1 | AT1G28650 | 39.368 | 348 | 193 | 5 | 21 | 352 | 28 | 373 | 5.65e-78 | 244 |
| MS.gene031453.t1 | AT1G28660 | 39.542 | 349 | 191 | 7 | 21 | 352 | 26 | 371 | 1.04e-77 | 244 |
| MS.gene031453.t1 | AT1G28640 | 39.255 | 349 | 192 | 7 | 21 | 352 | 26 | 371 | 2.26e-77 | 243 |
| MS.gene031453.t1 | AT1G31550 | 39.782 | 367 | 194 | 9 | 1 | 350 | 10 | 366 | 2.52e-77 | 243 |
| MS.gene031453.t1 | AT1G28660 | 39.542 | 349 | 190 | 8 | 21 | 352 | 26 | 370 | 5.03e-77 | 242 |
| MS.gene031453.t1 | AT3G48460 | 34.561 | 353 | 197 | 9 | 28 | 358 | 36 | 376 | 4.53e-63 | 206 |
| MS.gene031453.t1 | AT1G28580 | 38.754 | 289 | 161 | 6 | 75 | 350 | 5 | 290 | 2.22e-62 | 202 |
| MS.gene031453.t1 | AT5G03980 | 34.091 | 352 | 166 | 8 | 6 | 342 | 10 | 310 | 4.86e-57 | 189 |
| MS.gene031453.t1 | AT1G54790 | 31.680 | 363 | 205 | 10 | 26 | 357 | 28 | 378 | 3.95e-47 | 164 |
| MS.gene031453.t1 | AT3G05180 | 31.805 | 349 | 199 | 10 | 28 | 348 | 34 | 371 | 6.36e-46 | 161 |
| MS.gene031453.t1 | AT4G01130 | 33.803 | 355 | 189 | 13 | 28 | 350 | 32 | 372 | 2.15e-45 | 160 |
| MS.gene031453.t1 | AT1G28570 | 38.756 | 209 | 116 | 3 | 154 | 350 | 88 | 296 | 2.52e-44 | 155 |
| MS.gene031453.t1 | AT1G28570 | 45.455 | 77 | 38 | 1 | 7 | 79 | 11 | 87 | 3.32e-12 | 67.0 |
| MS.gene031453.t1 | AT1G56670 | 29.700 | 367 | 228 | 9 | 2 | 350 | 9 | 363 | 5.80e-44 | 155 |
| MS.gene031453.t1 | AT1G28570 | 38.725 | 204 | 113 | 3 | 159 | 350 | 2 | 205 | 1.23e-43 | 150 |
| MS.gene031453.t1 | AT1G54790 | 30.435 | 391 | 224 | 13 | 1 | 357 | 1 | 377 | 1.61e-43 | 155 |
| MS.gene031453.t1 | AT5G14450 | 29.412 | 374 | 226 | 10 | 5 | 350 | 15 | 378 | 2.84e-42 | 152 |
| MS.gene031453.t1 | AT1G67830 | 30.769 | 351 | 210 | 10 | 21 | 345 | 21 | 364 | 7.49e-42 | 150 |
| MS.gene031453.t1 | AT3G26430 | 31.476 | 359 | 197 | 11 | 28 | 352 | 29 | 372 | 2.76e-41 | 149 |
| MS.gene031453.t1 | AT1G28600 | 41.148 | 209 | 106 | 7 | 3 | 205 | 11 | 208 | 2.95e-40 | 142 |
| MS.gene031453.t1 | AT3G27950 | 29.947 | 374 | 224 | 9 | 5 | 354 | 7 | 366 | 1.11e-39 | 144 |
| MS.gene031453.t1 | AT1G28610 | 42.000 | 200 | 110 | 3 | 15 | 210 | 16 | 213 | 1.39e-39 | 141 |
| MS.gene031453.t1 | AT1G54790 | 28.916 | 415 | 225 | 14 | 1 | 357 | 1 | 403 | 2.29e-38 | 142 |
| MS.gene031453.t1 | AT3G62280 | 29.226 | 349 | 206 | 11 | 21 | 350 | 31 | 357 | 1.52e-37 | 139 |
| MS.gene031453.t1 | AT1G09390 | 27.198 | 364 | 234 | 9 | 4 | 350 | 11 | 360 | 4.00e-36 | 135 |
| MS.gene031453.t1 | AT4G01130 | 35.125 | 279 | 157 | 10 | 28 | 294 | 32 | 298 | 1.23e-35 | 132 |
| MS.gene031453.t1 | AT1G56670 | 29.766 | 299 | 194 | 7 | 2 | 294 | 9 | 297 | 1.33e-32 | 124 |
| MS.gene031453.t1 | AT1G20120 | 29.155 | 343 | 203 | 13 | 27 | 347 | 75 | 399 | 5.16e-29 | 116 |
| MS.gene031453.t1 | AT1G73610 | 28.963 | 328 | 201 | 11 | 27 | 344 | 32 | 337 | 1.15e-27 | 111 |
| MS.gene031453.t1 | AT5G15720 | 28.485 | 330 | 199 | 13 | 30 | 339 | 30 | 342 | 3.41e-27 | 110 |
| MS.gene031453.t1 | AT1G75890 | 27.500 | 360 | 226 | 13 | 4 | 344 | 20 | 363 | 5.24e-27 | 110 |
| MS.gene031453.t1 | AT1G75890 | 27.596 | 366 | 231 | 13 | 4 | 344 | 20 | 376 | 9.84e-27 | 109 |
| MS.gene031453.t1 | AT1G75890 | 27.500 | 360 | 226 | 13 | 4 | 344 | 49 | 392 | 1.18e-26 | 109 |
| MS.gene031453.t1 | AT4G10950 | 26.126 | 333 | 213 | 12 | 30 | 345 | 71 | 387 | 1.41e-26 | 109 |
| MS.gene031453.t1 | AT1G75880 | 28.883 | 367 | 212 | 14 | 8 | 344 | 20 | 367 | 1.51e-26 | 108 |
| MS.gene031453.t1 | AT2G40250 | 28.947 | 342 | 203 | 14 | 21 | 339 | 26 | 350 | 5.15e-26 | 107 |
| MS.gene031453.t1 | AT1G71120 | 26.923 | 338 | 199 | 10 | 30 | 345 | 31 | 342 | 7.94e-26 | 107 |
| MS.gene031453.t1 | AT1G23500 | 28.409 | 352 | 210 | 14 | 6 | 345 | 18 | 339 | 1.07e-25 | 106 |
| MS.gene031453.t1 | AT3G62280 | 28.826 | 281 | 173 | 9 | 21 | 294 | 31 | 291 | 1.24e-25 | 105 |
| MS.gene031453.t1 | AT3G53100 | 27.027 | 333 | 206 | 13 | 30 | 343 | 29 | 343 | 1.75e-25 | 105 |
| MS.gene031453.t1 | AT1G20132 | 28.909 | 339 | 204 | 12 | 30 | 349 | 61 | 381 | 2.25e-25 | 105 |
| MS.gene031453.t1 | AT1G75880 | 28.804 | 368 | 212 | 15 | 8 | 344 | 20 | 368 | 7.00e-25 | 104 |
| MS.gene031453.t1 | AT5G63170 | 27.848 | 316 | 197 | 11 | 30 | 335 | 28 | 322 | 7.20e-25 | 103 |
| MS.gene031453.t1 | AT2G42990 | 29.395 | 347 | 205 | 14 | 13 | 339 | 12 | 338 | 7.53e-25 | 103 |
| MS.gene031453.t1 | AT3G14225 | 27.011 | 348 | 212 | 12 | 30 | 355 | 37 | 364 | 8.40e-25 | 104 |
| MS.gene031453.t1 | AT1G06990 | 28.767 | 365 | 225 | 14 | 1 | 347 | 9 | 356 | 1.11e-24 | 103 |
| MS.gene031453.t1 | AT4G01130 | 28.716 | 296 | 171 | 10 | 85 | 350 | 1 | 286 | 1.44e-24 | 102 |
| MS.gene031453.t1 | AT1G75920 | 28.846 | 364 | 203 | 17 | 1 | 344 | 9 | 336 | 3.52e-24 | 102 |
| MS.gene031453.t1 | AT4G10950 | 25.826 | 333 | 210 | 13 | 30 | 345 | 71 | 383 | 5.63e-24 | 102 |
| MS.gene031453.t1 | AT3G14820 | 28.060 | 335 | 196 | 12 | 30 | 343 | 32 | 342 | 6.01e-24 | 101 |
| MS.gene031453.t1 | AT1G75910 | 27.424 | 361 | 211 | 12 | 5 | 344 | 6 | 336 | 6.90e-24 | 101 |
| MS.gene031453.t1 | AT3G14225 | 27.714 | 350 | 211 | 13 | 30 | 355 | 37 | 368 | 1.23e-23 | 100 |
| MS.gene031453.t1 | AT1G71250 | 26.488 | 336 | 216 | 11 | 30 | 349 | 41 | 361 | 1.80e-23 | 100 |
| MS.gene031453.t1 | AT1G20135 | 25.545 | 321 | 210 | 10 | 27 | 338 | 26 | 326 | 2.26e-23 | 99.4 |
| MS.gene031453.t1 | AT5G22810 | 27.195 | 353 | 212 | 14 | 15 | 343 | 20 | 351 | 4.34e-23 | 99.4 |
| MS.gene031453.t1 | AT1G74460 | 25.762 | 361 | 221 | 12 | 3 | 344 | 6 | 338 | 7.79e-23 | 98.6 |
| MS.gene031453.t1 | AT1G71691 | 28.190 | 337 | 197 | 11 | 30 | 345 | 55 | 367 | 8.23e-23 | 98.6 |
| MS.gene031453.t1 | AT1G29670 | 27.134 | 328 | 202 | 13 | 31 | 340 | 33 | 341 | 4.17e-22 | 96.3 |
| MS.gene031453.t1 | AT1G75900 | 26.126 | 333 | 208 | 12 | 30 | 343 | 43 | 356 | 4.26e-22 | 96.3 |
| MS.gene031453.t1 | AT5G15720 | 28.826 | 281 | 166 | 12 | 30 | 294 | 30 | 292 | 6.66e-22 | 95.1 |
| MS.gene031453.t1 | AT5G42170 | 25.994 | 327 | 214 | 11 | 30 | 343 | 50 | 361 | 7.70e-22 | 95.9 |
| MS.gene031453.t1 | AT1G59406 | 27.451 | 357 | 231 | 10 | 1 | 344 | 1 | 342 | 9.68e-22 | 95.1 |
| MS.gene031453.t1 | AT1G59030 | 27.451 | 357 | 231 | 10 | 1 | 344 | 1 | 342 | 9.68e-22 | 95.1 |
| MS.gene031453.t1 | AT1G58725 | 27.451 | 357 | 231 | 10 | 1 | 344 | 1 | 342 | 9.68e-22 | 95.1 |
| MS.gene031453.t1 | AT5G08460 | 28.829 | 333 | 200 | 15 | 28 | 339 | 47 | 363 | 1.00e-21 | 95.5 |
| MS.gene031453.t1 | AT1G29670 | 27.439 | 328 | 201 | 13 | 31 | 340 | 101 | 409 | 1.18e-21 | 95.9 |
| MS.gene031453.t1 | AT1G53920 | 26.849 | 365 | 226 | 14 | 9 | 352 | 27 | 371 | 2.11e-21 | 94.7 |
| MS.gene031453.t1 | AT2G23540 | 27.826 | 345 | 199 | 14 | 30 | 345 | 48 | 371 | 2.63e-21 | 94.4 |
| MS.gene031453.t1 | AT2G30220 | 27.855 | 359 | 216 | 13 | 5 | 339 | 6 | 345 | 6.45e-21 | 93.2 |
| MS.gene031453.t1 | AT3G50400 | 28.954 | 373 | 211 | 17 | 3 | 345 | 10 | 358 | 7.76e-21 | 92.8 |
| MS.gene031453.t1 | AT1G58520 | 27.647 | 340 | 211 | 10 | 18 | 344 | 18 | 335 | 7.78e-21 | 92.4 |
| MS.gene031453.t1 | AT1G58525 | 27.647 | 340 | 211 | 10 | 18 | 344 | 18 | 335 | 7.78e-21 | 92.4 |
| MS.gene031453.t1 | AT2G30310 | 28.333 | 360 | 214 | 15 | 3 | 339 | 8 | 346 | 9.07e-21 | 92.4 |
| MS.gene031453.t1 | AT1G75920 | 27.968 | 379 | 202 | 18 | 1 | 344 | 4 | 346 | 1.09e-20 | 92.4 |
| MS.gene031453.t1 | AT2G31540 | 28.302 | 371 | 215 | 15 | 7 | 348 | 11 | 359 | 1.11e-20 | 92.4 |
| MS.gene031453.t1 | AT5G40990 | 26.503 | 366 | 228 | 10 | 4 | 346 | 11 | 358 | 1.20e-20 | 92.4 |
| MS.gene031453.t1 | AT2G04570 | 25.740 | 338 | 212 | 12 | 30 | 347 | 28 | 346 | 3.62e-20 | 90.9 |
| MS.gene031453.t1 | AT5G41890 | 27.123 | 365 | 219 | 13 | 11 | 345 | 12 | 359 | 5.43e-20 | 90.5 |
| MS.gene031453.t1 | AT1G53940 | 28.571 | 343 | 198 | 14 | 30 | 346 | 39 | 360 | 7.31e-20 | 90.1 |
| MS.gene031453.t1 | AT4G26790 | 25.146 | 342 | 217 | 12 | 28 | 349 | 27 | 349 | 1.00e-19 | 89.4 |
| MS.gene031453.t1 | AT4G26790 | 25.146 | 342 | 217 | 12 | 28 | 349 | 27 | 349 | 1.00e-19 | 89.4 |
| MS.gene031453.t1 | AT3G04290 | 26.048 | 334 | 214 | 11 | 29 | 345 | 28 | 345 | 1.42e-19 | 89.4 |
| MS.gene031453.t1 | AT1G20130 | 27.405 | 343 | 201 | 14 | 30 | 344 | 204 | 526 | 1.52e-19 | 90.1 |
| MS.gene031453.t1 | AT5G55050 | 28.190 | 337 | 198 | 16 | 27 | 338 | 36 | 353 | 2.06e-19 | 89.0 |
| MS.gene031453.t1 | AT1G71691 | 28.674 | 279 | 163 | 8 | 30 | 294 | 55 | 311 | 2.42e-19 | 87.8 |
| MS.gene031453.t1 | AT1G75930 | 27.273 | 330 | 207 | 13 | 27 | 343 | 26 | 335 | 3.07e-19 | 88.2 |
| MS.gene031453.t1 | AT1G75920 | 29.206 | 315 | 176 | 15 | 50 | 344 | 21 | 308 | 3.17e-19 | 87.4 |
| MS.gene031453.t1 | AT1G20130 | 27.405 | 343 | 201 | 14 | 30 | 344 | 184 | 506 | 3.24e-19 | 89.4 |
| MS.gene031453.t1 | AT5G45960 | 26.488 | 336 | 212 | 13 | 27 | 342 | 44 | 364 | 3.45e-19 | 88.2 |
| MS.gene031453.t1 | AT3G16370 | 25.220 | 341 | 213 | 12 | 30 | 348 | 30 | 350 | 8.57e-19 | 87.0 |
| MS.gene031453.t1 | AT1G53990 | 24.734 | 376 | 232 | 14 | 3 | 355 | 8 | 355 | 9.03e-19 | 87.0 |
| MS.gene031453.t1 | AT1G54020 | 27.222 | 360 | 209 | 18 | 15 | 356 | 17 | 341 | 9.17e-19 | 87.0 |
| MS.gene031453.t1 | AT1G58430 | 26.741 | 359 | 226 | 11 | 4 | 342 | 9 | 350 | 1.02e-18 | 86.7 |
| MS.gene031453.t1 | AT1G33811 | 25.723 | 346 | 225 | 13 | 14 | 340 | 18 | 350 | 5.19e-18 | 84.7 |
| MS.gene031453.t1 | AT2G24560 | 27.401 | 354 | 215 | 13 | 4 | 335 | 9 | 342 | 7.17e-18 | 84.3 |
| MS.gene031453.t1 | AT5G03610 | 25.439 | 342 | 204 | 13 | 25 | 344 | 38 | 350 | 8.96e-18 | 84.0 |
| MS.gene031453.t1 | AT5G33370 | 25.519 | 337 | 212 | 12 | 29 | 345 | 29 | 346 | 9.14e-18 | 84.0 |
| MS.gene031453.t1 | AT2G03980 | 28.097 | 331 | 201 | 13 | 27 | 339 | 40 | 351 | 1.58e-17 | 83.2 |
| MS.gene031453.t1 | AT2G03980 | 28.097 | 331 | 201 | 13 | 27 | 339 | 40 | 351 | 1.58e-17 | 83.2 |
| MS.gene031453.t1 | AT2G03980 | 28.097 | 331 | 201 | 13 | 27 | 339 | 40 | 351 | 1.58e-17 | 83.2 |
| MS.gene031453.t1 | AT2G03980 | 28.097 | 331 | 201 | 13 | 27 | 339 | 40 | 351 | 1.58e-17 | 83.2 |
| MS.gene031453.t1 | AT3G14210 | 27.378 | 347 | 201 | 16 | 30 | 356 | 36 | 351 | 8.40e-17 | 81.3 |
| MS.gene031453.t1 | AT1G29660 | 25.688 | 327 | 209 | 14 | 31 | 340 | 33 | 342 | 1.01e-16 | 80.9 |
| MS.gene031453.t1 | AT5G37690 | 23.944 | 355 | 235 | 13 | 6 | 342 | 1 | 338 | 1.40e-16 | 80.5 |
| MS.gene031453.t1 | AT2G19060 | 27.273 | 341 | 197 | 16 | 31 | 350 | 31 | 341 | 3.78e-16 | 79.0 |
| MS.gene031453.t1 | AT4G18970 | 24.251 | 334 | 206 | 12 | 31 | 340 | 29 | 339 | 4.03e-16 | 79.0 |
| MS.gene031453.t1 | AT4G18970 | 24.251 | 334 | 206 | 12 | 31 | 340 | 29 | 339 | 5.79e-16 | 79.0 |
| MS.gene031453.t1 | AT3G09930 | 25.373 | 335 | 210 | 11 | 21 | 338 | 30 | 341 | 5.83e-16 | 78.6 |
| MS.gene031453.t1 | AT3G09930 | 25.373 | 335 | 210 | 11 | 21 | 338 | 30 | 341 | 5.83e-16 | 78.6 |
| MS.gene031453.t1 | AT2G19010 | 27.596 | 337 | 199 | 13 | 31 | 350 | 31 | 339 | 7.18e-16 | 78.2 |
| MS.gene031453.t1 | AT2G19010 | 27.596 | 337 | 199 | 13 | 31 | 350 | 61 | 369 | 1.06e-15 | 78.2 |
| MS.gene031453.t1 | AT5G45670 | 23.837 | 344 | 216 | 12 | 20 | 340 | 20 | 340 | 2.92e-15 | 76.6 |
| MS.gene031453.t1 | AT3G43550 | 27.113 | 284 | 181 | 9 | 20 | 294 | 20 | 286 | 1.14e-14 | 73.9 |
| MS.gene031453.t1 | AT1G53940 | 29.032 | 279 | 166 | 11 | 29 | 294 | 38 | 297 | 1.55e-14 | 73.9 |
| MS.gene031453.t1 | AT2G24560 | 27.244 | 312 | 196 | 11 | 4 | 301 | 9 | 303 | 1.72e-14 | 73.9 |
| MS.gene031453.t1 | AT5G03600 | 24.100 | 361 | 220 | 13 | 1 | 338 | 13 | 342 | 2.46e-14 | 73.9 |
| MS.gene031453.t1 | AT5G03600 | 23.867 | 331 | 205 | 11 | 24 | 338 | 8 | 307 | 3.04e-14 | 73.2 |
| MS.gene031453.t1 | AT1G71691 | 25.517 | 290 | 172 | 10 | 76 | 345 | 1 | 266 | 2.55e-13 | 70.1 |
| MS.gene031453.t1 | AT3G14220 | 24.928 | 349 | 210 | 15 | 10 | 339 | 16 | 331 | 4.46e-13 | 70.1 |
| MS.gene031453.t1 | AT1G54010 | 24.471 | 331 | 202 | 15 | 31 | 342 | 37 | 338 | 9.09e-13 | 69.3 |
| MS.gene031453.t1 | AT2G19050 | 26.453 | 344 | 194 | 17 | 31 | 348 | 32 | 342 | 2.80e-12 | 67.4 |
| MS.gene031453.t1 | AT5G33370 | 25.806 | 279 | 177 | 10 | 29 | 294 | 29 | 290 | 6.48e-12 | 66.2 |
| MS.gene031453.t1 | AT5G37690 | 23.229 | 353 | 232 | 14 | 6 | 342 | 1 | 330 | 8.01e-12 | 66.2 |
Find 65 sgRNAs with CRISPR-Local
Find 102 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGAGAAATAGTTCCCTTTA+TGG | 0.130841 | 2.1:+21217339 | MS.gene031453:CDS |
| ATCCTTCAAAACGTATAAAT+TGG | 0.154270 | 2.1:+21217992 | MS.gene031453:CDS |
| AAAGAAGACTATGATGAATT+TGG | 0.177918 | 2.1:+21217608 | MS.gene031453:CDS |
| GTCTTTGCTTTCATTCTTAA+AGG | 0.198948 | 2.1:-21216947 | None:intergenic |
| AATTTAGTCGAGTACTTTAA+TGG | 0.225097 | 2.1:+21217650 | MS.gene031453:CDS |
| CTCAATGAGTTATTTGTATC+TGG | 0.254916 | 2.1:-21217057 | None:intergenic |
| TTAAGAGAAGGATTTGAAAA+TGG | 0.264149 | 2.1:-21218075 | None:intergenic |
| TATGAAGCTTTCTTTAACTT+TGG | 0.264191 | 2.1:+21216501 | MS.gene031453:CDS |
| TTGTTTATAGTTGGAGAAAT+TGG | 0.283387 | 2.1:+21217268 | MS.gene031453:CDS |
| ATGCCTAACCCTATTCCTTA+TGG | 0.311052 | 2.1:+21216570 | MS.gene031453:CDS |
| AGTAATGGCTTCAACCATAA+AGG | 0.331538 | 2.1:-21217353 | None:intergenic |
| TAAGTAGAACCATAAGGAAT+AGG | 0.340666 | 2.1:-21216579 | None:intergenic |
| AAGAAATCATTGTTTATAGT+TGG | 0.348062 | 2.1:+21217259 | MS.gene031453:CDS |
| TCAATTGTAGCCGAGGCATA+TGG | 0.349088 | 2.1:+21216907 | MS.gene031453:intron |
| GAAGAGAGTGAATATATTCA+TGG | 0.366592 | 2.1:-21216418 | None:intergenic |
| TATCAAACACCACAACAATA+TGG | 0.370274 | 2.1:+21217764 | MS.gene031453:CDS |
| TTTCCAATGGGGTGCAGTGC+TGG | 0.370791 | 2.1:+21217557 | MS.gene031453:CDS |
| ATTTAGTCGAGTACTTTAAT+GGG | 0.379933 | 2.1:+21217651 | MS.gene031453:CDS |
| AAGAAGACTATGATGAATTT+GGG | 0.390648 | 2.1:+21217609 | MS.gene031453:CDS |
| ACTTACTTTAAACATCCTTC+AGG | 0.400463 | 2.1:+21216597 | MS.gene031453:CDS |
| TGCAATAAAACATACATTTG+TGG | 0.419456 | 2.1:-21217380 | None:intergenic |
| GCTGTAGAGCTAGTGGTGCC+TGG | 0.423142 | 2.1:+21217530 | MS.gene031453:CDS |
| CATTGAGCATTCAACTTGGA+TGG | 0.434862 | 2.1:+21217073 | MS.gene031453:CDS |
| GCTTATAAGCTAATAGCAAA+AGG | 0.438238 | 2.1:+21218039 | MS.gene031453:CDS |
| TACATTTGTGGTGTTAGTAA+TGG | 0.442995 | 2.1:-21217368 | None:intergenic |
| AAGTAGAACCATAAGGAATA+GGG | 0.452342 | 2.1:-21216578 | None:intergenic |
| CAATTGTAGCCGAGGCATAT+GGG | 0.454691 | 2.1:+21216908 | MS.gene031453:intron |
| TCCTTCAAAACGTATAAATT+GGG | 0.456516 | 2.1:+21217993 | MS.gene031453:CDS |
| AAAAGAGGGGATTTAAGAGA+AGG | 0.458433 | 2.1:-21218087 | None:intergenic |
| GTAATGGCTTCAACCATAAA+GGG | 0.480246 | 2.1:-21217352 | None:intergenic |
| TTGCTTTCATTCTTAAAGGC+AGG | 0.481404 | 2.1:-21216943 | None:intergenic |
| GAACCATAAGGAATAGGGTT+AGG | 0.482948 | 2.1:-21216573 | None:intergenic |
| CCTTCAGGACGTATGTCAAA+TGG | 0.484377 | 2.1:+21216612 | MS.gene031453:CDS |
| TTCTTCATCACCTTCACATG+TGG | 0.489386 | 2.1:+21216438 | MS.gene031453:CDS |
| GAGTTATTTGTATCTGGAAG+AGG | 0.491124 | 2.1:-21217051 | None:intergenic |
| TGGTGTTTGATATAAACGTT+TGG | 0.492868 | 2.1:-21217753 | None:intergenic |
| AACTCATTGAGCATTCAACT+TGG | 0.498581 | 2.1:+21217069 | MS.gene031453:CDS |
| AAGTATATTATCTTAACTCC+AGG | 0.499283 | 2.1:-21217713 | None:intergenic |
| GGAAATGCTGCGTTTGTCTA+CGG | 0.500564 | 2.1:+21216543 | MS.gene031453:CDS |
| CTCCTCTGTAAAAGCAAAGA+AGG | 0.500581 | 2.1:+21217117 | MS.gene031453:CDS |
| AAAGTATGTTGTGGAGGATG+TGG | 0.512867 | 2.1:+21217943 | MS.gene031453:CDS |
| CTTATAAGCTAATAGCAAAA+GGG | 0.513103 | 2.1:+21218040 | MS.gene031453:CDS |
| TTTATAGTTGGAGAAATTGG+TGG | 0.517613 | 2.1:+21217271 | MS.gene031453:CDS |
| CTGTAGAGCTAGTGGTGCCT+GGG | 0.525536 | 2.1:+21217531 | MS.gene031453:CDS |
| GTTCCAGCACTGCACCCCAT+TGG | 0.540064 | 2.1:-21217560 | None:intergenic |
| ATAGCAAAAGGGCTAGTTGA+GGG | 0.540275 | 2.1:+21218051 | MS.gene031453:CDS |
| TTAAAGTAAGTAGAACCATA+AGG | 0.541599 | 2.1:-21216585 | None:intergenic |
| TGCTAGGTGCTAATCGAAGA+AGG | 0.549087 | 2.1:+21217506 | MS.gene031453:intron |
| TTGTAGAAAACCACATGTGA+AGG | 0.567522 | 2.1:-21216448 | None:intergenic |
| CACCCCATTGGAAAATTCCC+AGG | 0.567947 | 2.1:-21217548 | None:intergenic |
| TTATAGTTGGAGAAATTGGT+GGG | 0.571013 | 2.1:+21217272 | MS.gene031453:CDS |
| GGTGATTCAATAAGTGACAC+TGG | 0.575857 | 2.1:+21216522 | MS.gene031453:CDS |
| AGAAGGAGCTGTAGAGCTAG+TGG | 0.584696 | 2.1:+21217523 | MS.gene031453:CDS |
| AAAAGGCAACCCATATGCCT+CGG | 0.587551 | 2.1:-21216917 | None:intergenic |
| ACACTAAGACAGAAGCACCC+TGG | 0.596658 | 2.1:+21217695 | MS.gene031453:CDS |
| CCATTTGACATACGTCCTGA+AGG | 0.596686 | 2.1:-21216612 | None:intergenic |
| AAGAAAGCTTCATATGAGAG+AGG | 0.610367 | 2.1:-21216492 | None:intergenic |
| AGTATATTATCTTAACTCCA+GGG | 0.615136 | 2.1:-21217712 | None:intergenic |
| TACCGCTCACCATATTGTTG+TGG | 0.624718 | 2.1:-21217773 | None:intergenic |
| TAAGGAATAGGGTTAGGCAT+AGG | 0.635829 | 2.1:-21216567 | None:intergenic |
| TCAAAACGTATAAATTGGGA+CGG | 0.645170 | 2.1:+21217997 | MS.gene031453:CDS |
| AATAGCAAAAGGGCTAGTTG+AGG | 0.650233 | 2.1:+21218050 | MS.gene031453:CDS |
| TAAGCTGCTTCAGTAAAGTG+AGG | 0.670311 | 2.1:-21218021 | None:intergenic |
| CAGTGCTGGAACATTGACAT+CGG | 0.723676 | 2.1:+21217571 | MS.gene031453:CDS |
| ATACTCAACATTGAGTACAG+TGG | 0.728519 | 2.1:-21217010 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATATATAATTATATATTT+TGG | + | chr2.1:21217797-21217816 | MS.gene031453:intron | 0.0% |
| !! | AAAAAAAAAATAATGTAATG+AGG | + | chr2.1:21216785-21216804 | MS.gene031453:intron | 10.0% |
| !! | TTAATCTAAATATCAAGTTA+AGG | - | chr2.1:21216766-21216785 | None:intergenic | 15.0% |
| !!! | CATGAATTTTTTTTTCAATA+TGG | + | chr2.1:21217190-21217209 | MS.gene031453:intron | 15.0% |
| !!! | TAAAAATCTATTTTCTTTTG+TGG | + | chr2.1:21216824-21216843 | MS.gene031453:intron | 15.0% |
| !! | AAATGAAAAGGAATAATTTG+TGG | - | chr2.1:21217858-21217877 | None:intergenic | 20.0% |
| !! | AAGAAATCATTGTTTATAGT+TGG | + | chr2.1:21217259-21217278 | MS.gene031453:CDS | 20.0% |
| !! | ATCAATCAAATTAATTATGC+AGG | + | chr2.1:21217898-21217917 | MS.gene031453:intron | 20.0% |
| !! | TACATACAATCTACAAAATA+TGG | + | chr2.1:21216733-21216752 | MS.gene031453:intron | 20.0% |
| !! | TTGAGTATTATGTCAAAAAT+GGG | + | chr2.1:21217025-21217044 | MS.gene031453:CDS | 20.0% |
| !!! | GTTTTATTGCAATTAAGTTT+TGG | + | chr2.1:21217392-21217411 | MS.gene031453:intron | 20.0% |
| !!! | TTGTTTCTTATTCTTATCAT+TGG | - | chr2.1:21216702-21216721 | None:intergenic | 20.0% |
| ! | AAAAAAAATTCCACTGCTTA+TGG | - | chr2.1:21217148-21217167 | None:intergenic | 25.0% |
| ! | AAAGAAGACTATGATGAATT+TGG | + | chr2.1:21217608-21217627 | MS.gene031453:CDS | 25.0% |
| ! | AAAGACCATGATATCAAAAA+AGG | + | chr2.1:21216964-21216983 | MS.gene031453:CDS | 25.0% |
| ! | AAGAAGACTATGATGAATTT+GGG | + | chr2.1:21217609-21217628 | MS.gene031453:CDS | 25.0% |
| ! | AAGTATATTATCTTAACTCC+AGG | - | chr2.1:21217716-21217735 | None:intergenic | 25.0% |
| ! | AATTTAGTCGAGTACTTTAA+TGG | + | chr2.1:21217650-21217669 | MS.gene031453:CDS | 25.0% |
| ! | AGTATATTATCTTAACTCCA+GGG | - | chr2.1:21217715-21217734 | None:intergenic | 25.0% |
| ! | ATCCTTCAAAACGTATAAAT+TGG | + | chr2.1:21217992-21218011 | MS.gene031453:CDS | 25.0% |
| ! | ATTTAGTCGAGTACTTTAAT+GGG | + | chr2.1:21217651-21217670 | MS.gene031453:CDS | 25.0% |
| ! | CAAAGAGAAATATCATTGAT+TGG | + | chr2.1:21217441-21217460 | MS.gene031453:intron | 25.0% |
| ! | CATGCATAAATGAAATGAAA+AGG | - | chr2.1:21217870-21217889 | None:intergenic | 25.0% |
| ! | CTTATAAGCTAATAGCAAAA+GGG | + | chr2.1:21218040-21218059 | MS.gene031453:CDS | 25.0% |
| ! | GTTGAGTATTATGTCAAAAA+TGG | + | chr2.1:21217024-21217043 | MS.gene031453:CDS | 25.0% |
| ! | TCCTTCAAAACGTATAAATT+GGG | + | chr2.1:21217993-21218012 | MS.gene031453:CDS | 25.0% |
| ! | TGCAATAAAACATACATTTG+TGG | - | chr2.1:21217383-21217402 | None:intergenic | 25.0% |
| ! | TTAAAGTAAGTAGAACCATA+AGG | - | chr2.1:21216588-21216607 | None:intergenic | 25.0% |
| ! | TTAAGAGAAGGATTTGAAAA+TGG | - | chr2.1:21218078-21218097 | None:intergenic | 25.0% |
| ! | TTGTTTATAGTTGGAGAAAT+TGG | + | chr2.1:21217268-21217287 | MS.gene031453:CDS | 25.0% |
| !! | TATGAAGCTTTCTTTAACTT+TGG | + | chr2.1:21216501-21216520 | MS.gene031453:CDS | 25.0% |
| !!! | TAATTATGCAGGTTTTGATA+AGG | + | chr2.1:21217909-21217928 | MS.gene031453:intron | 25.0% |
| !!! | TTACTCCTTTTTTGATATCA+TGG | - | chr2.1:21216972-21216991 | None:intergenic | 25.0% |
| AAGTAGAACCATAAGGAATA+GGG | - | chr2.1:21216581-21216600 | None:intergenic | 30.0% | |
| ACTTACTTTAAACATCCTTC+AGG | + | chr2.1:21216597-21216616 | MS.gene031453:CDS | 30.0% | |
| CTCAATGAGTTATTTGTATC+TGG | - | chr2.1:21217060-21217079 | None:intergenic | 30.0% | |
| GCTTATAAGCTAATAGCAAA+AGG | + | chr2.1:21218039-21218058 | MS.gene031453:CDS | 30.0% | |
| GTCTTTGCTTTCATTCTTAA+AGG | - | chr2.1:21216950-21216969 | None:intergenic | 30.0% | |
| TAAGTAGAACCATAAGGAAT+AGG | - | chr2.1:21216582-21216601 | None:intergenic | 30.0% | |
| TATCAAACACCACAACAATA+TGG | + | chr2.1:21217764-21217783 | MS.gene031453:CDS | 30.0% | |
| TCAAAACGTATAAATTGGGA+CGG | + | chr2.1:21217997-21218016 | MS.gene031453:CDS | 30.0% | |
| TGGTGTTTGATATAAACGTT+TGG | - | chr2.1:21217756-21217775 | None:intergenic | 30.0% | |
| TTATAGTTGGAGAAATTGGT+GGG | + | chr2.1:21217272-21217291 | MS.gene031453:CDS | 30.0% | |
| TTTATAGTTGGAGAAATTGG+TGG | + | chr2.1:21217271-21217290 | MS.gene031453:CDS | 30.0% | |
| TTTCATTTATGCATGCTTAC+TGG | + | chr2.1:21217875-21217894 | MS.gene031453:intron | 30.0% | |
| ! | ATTTTCAAAGTATGTTGTGG+AGG | + | chr2.1:21217937-21217956 | MS.gene031453:CDS | 30.0% |
| ! | CGACTGATCATAGATTTTAT+TGG | + | chr2.1:21216636-21216655 | MS.gene031453:CDS | 30.0% |
| ! | TACATTTGTGGTGTTAGTAA+TGG | - | chr2.1:21217371-21217390 | None:intergenic | 30.0% |
| ! | TCCCAATTTATACGTTTTGA+AGG | - | chr2.1:21217997-21218016 | None:intergenic | 30.0% |
| !! | CTAAGCTATTTTGAAAAGAG+GGG | - | chr2.1:21218103-21218122 | None:intergenic | 30.0% |
| !! | GCTATTTTCAAAGTATGTTG+TGG | + | chr2.1:21217934-21217953 | MS.gene031453:CDS | 30.0% |
| !!! | TGATTTTGTTTCTATGTGCT+AGG | + | chr2.1:21217490-21217509 | MS.gene031453:intron | 30.0% |
| AAAAGAGGGGATTTAAGAGA+AGG | - | chr2.1:21218090-21218109 | None:intergenic | 35.0% | |
| AACTCATTGAGCATTCAACT+TGG | + | chr2.1:21217069-21217088 | MS.gene031453:CDS | 35.0% | |
| AAGAAAGCTTCATATGAGAG+AGG | - | chr2.1:21216495-21216514 | None:intergenic | 35.0% | |
| AGTAATGGCTTCAACCATAA+AGG | - | chr2.1:21217356-21217375 | None:intergenic | 35.0% | |
| ATACTCAACATTGAGTACAG+TGG | - | chr2.1:21217013-21217032 | None:intergenic | 35.0% | |
| GAGTTATTTGTATCTGGAAG+AGG | - | chr2.1:21217054-21217073 | None:intergenic | 35.0% | |
| GTAATGGCTTCAACCATAAA+GGG | - | chr2.1:21217355-21217374 | None:intergenic | 35.0% | |
| TCGAGAAATAGTTCCCTTTA+TGG | + | chr2.1:21217339-21217358 | MS.gene031453:CDS | 35.0% | |
| TTCTTAAAGGCAGGCAAAAA+AGG | - | chr2.1:21216937-21216956 | None:intergenic | 35.0% | |
| TTGCTTTCATTCTTAAAGGC+AGG | - | chr2.1:21216946-21216965 | None:intergenic | 35.0% | |
| TTGTAGAAAACCACATGTGA+AGG | - | chr2.1:21216451-21216470 | None:intergenic | 35.0% | |
| ! | CAATGTCACATATTTTCACG+CGG | - | chr2.1:21217472-21217491 | None:intergenic | 35.0% |
| ! | GGAGTAAATTTTGCATTTGC+TGG | + | chr2.1:21216985-21217004 | MS.gene031453:CDS | 35.0% |
| !! | AACCTTCTTTGCTTTTACAG+AGG | - | chr2.1:21217122-21217141 | None:intergenic | 35.0% |
| !! | TTCTTTGCTTTTACAGAGGA+GGG | - | chr2.1:21217118-21217137 | None:intergenic | 35.0% |
| AAAGTATGTTGTGGAGGATG+TGG | + | chr2.1:21217943-21217962 | MS.gene031453:CDS | 40.0% | |
| ATGCCTAACCCTATTCCTTA+TGG | + | chr2.1:21216570-21216589 | MS.gene031453:CDS | 40.0% | |
| CATTGAGCATTCAACTTGGA+TGG | + | chr2.1:21217073-21217092 | MS.gene031453:CDS | 40.0% | |
| CTCCTCTGTAAAAGCAAAGA+AGG | + | chr2.1:21217117-21217136 | MS.gene031453:CDS | 40.0% | |
| GAACCATAAGGAATAGGGTT+AGG | - | chr2.1:21216576-21216595 | None:intergenic | 40.0% | |
| GATCATTTCAATTGTAGCCG+AGG | + | chr2.1:21216900-21216919 | MS.gene031453:intron | 40.0% | |
| GGTGATTCAATAAGTGACAC+TGG | + | chr2.1:21216522-21216541 | MS.gene031453:CDS | 40.0% | |
| TAAGCTGCTTCAGTAAAGTG+AGG | - | chr2.1:21218024-21218043 | None:intergenic | 40.0% | |
| TAAGGAATAGGGTTAGGCAT+AGG | - | chr2.1:21216570-21216589 | None:intergenic | 40.0% | |
| TTCTTCATCACCTTCACATG+TGG | + | chr2.1:21216438-21216457 | MS.gene031453:CDS | 40.0% | |
| ! | GAAGGTTTTACCATAAGCAG+TGG | + | chr2.1:21217135-21217154 | MS.gene031453:intron | 40.0% |
| !! | AATAGCAAAAGGGCTAGTTG+AGG | + | chr2.1:21218050-21218069 | MS.gene031453:CDS | 40.0% |
| !! | ATAGCAAAAGGGCTAGTTGA+GGG | + | chr2.1:21218051-21218070 | MS.gene031453:CDS | 40.0% |
| !! | CTTCTTTGCTTTTACAGAGG+AGG | - | chr2.1:21217119-21217138 | None:intergenic | 40.0% |
| !! | TCTTTGCTTTTACAGAGGAG+GGG | - | chr2.1:21217117-21217136 | None:intergenic | 40.0% |
| AAAAGGCAACCCATATGCCT+CGG | - | chr2.1:21216920-21216939 | None:intergenic | 45.0% | |
| CAATTGTAGCCGAGGCATAT+GGG | + | chr2.1:21216908-21216927 | MS.gene031453:intron | 45.0% | |
| CACCACAACAATATGGTGAG+CGG | + | chr2.1:21217771-21217790 | MS.gene031453:intron | 45.0% | |
| CCATTTGACATACGTCCTGA+AGG | - | chr2.1:21216615-21216634 | None:intergenic | 45.0% | |
| CCTTCAGGACGTATGTCAAA+TGG | + | chr2.1:21216612-21216631 | MS.gene031453:CDS | 45.0% | |
| GGAAATGCTGCGTTTGTCTA+CGG | + | chr2.1:21216543-21216562 | MS.gene031453:CDS | 45.0% | |
| TACCGCTCACCATATTGTTG+TGG | - | chr2.1:21217776-21217795 | None:intergenic | 45.0% | |
| TCAATTGTAGCCGAGGCATA+TGG | + | chr2.1:21216907-21216926 | MS.gene031453:intron | 45.0% | |
| TGCTAGGTGCTAATCGAAGA+AGG | + | chr2.1:21217506-21217525 | MS.gene031453:intron | 45.0% | |
| ! | CAGTGCTGGAACATTGACAT+CGG | + | chr2.1:21217571-21217590 | MS.gene031453:CDS | 45.0% |
| ! | GTGCCTGGGAATTTTCCAAT+GGG | + | chr2.1:21217545-21217564 | MS.gene031453:CDS | 45.0% |
| ! | TGCCTGGGAATTTTCCAATG+GGG | + | chr2.1:21217546-21217565 | MS.gene031453:CDS | 45.0% |
| AGAAGGAGCTGTAGAGCTAG+TGG | + | chr2.1:21217523-21217542 | MS.gene031453:CDS | 50.0% | |
| CACCCCATTGGAAAATTCCC+AGG | - | chr2.1:21217551-21217570 | None:intergenic | 50.0% | |
| ! | GGTGCCTGGGAATTTTCCAA+TGG | + | chr2.1:21217544-21217563 | MS.gene031453:CDS | 50.0% |
| !! | ACACTAAGACAGAAGCACCC+TGG | + | chr2.1:21217695-21217714 | MS.gene031453:CDS | 50.0% |
| CTGTAGAGCTAGTGGTGCCT+GGG | + | chr2.1:21217531-21217550 | MS.gene031453:CDS | 55.0% | |
| TTTCCAATGGGGTGCAGTGC+TGG | + | chr2.1:21217557-21217576 | MS.gene031453:CDS | 55.0% | |
| GCTGTAGAGCTAGTGGTGCC+TGG | + | chr2.1:21217530-21217549 | MS.gene031453:CDS | 60.0% | |
| GTTCCAGCACTGCACCCCAT+TGG | - | chr2.1:21217563-21217582 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 21216420 | 21218122 | 21216420 | ID=MS.gene031453 |
| chr2.1 | mRNA | 21216420 | 21218122 | 21216420 | ID=MS.gene031453.t1;Parent=MS.gene031453 |
| chr2.1 | exon | 21216420 | 21216657 | 21216420 | ID=MS.gene031453.t1.exon1;Parent=MS.gene031453.t1 |
| chr2.1 | CDS | 21216420 | 21216657 | 21216420 | ID=cds.MS.gene031453.t1;Parent=MS.gene031453.t1 |
| chr2.1 | exon | 21216917 | 21217138 | 21216917 | ID=MS.gene031453.t1.exon2;Parent=MS.gene031453.t1 |
| chr2.1 | CDS | 21216917 | 21217138 | 21216917 | ID=cds.MS.gene031453.t1;Parent=MS.gene031453.t1 |
| chr2.1 | exon | 21217242 | 21217387 | 21217242 | ID=MS.gene031453.t1.exon3;Parent=MS.gene031453.t1 |
| chr2.1 | CDS | 21217242 | 21217387 | 21217242 | ID=cds.MS.gene031453.t1;Parent=MS.gene031453.t1 |
| chr2.1 | exon | 21217512 | 21217785 | 21217512 | ID=MS.gene031453.t1.exon4;Parent=MS.gene031453.t1 |
| chr2.1 | CDS | 21217512 | 21217785 | 21217512 | ID=cds.MS.gene031453.t1;Parent=MS.gene031453.t1 |
| chr2.1 | exon | 21217920 | 21218122 | 21217920 | ID=MS.gene031453.t1.exon5;Parent=MS.gene031453.t1 |
| chr2.1 | CDS | 21217920 | 21218122 | 21217920 | ID=cds.MS.gene031453.t1;Parent=MS.gene031453.t1 |
| Gene Sequence |
| Protein sequence |
