AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene032026

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032026.t1 MTR_3g069780 96.226 371 14 0 1 371 1 371 0.0 737
MS.gene032026.t1 MTR_3g438030 95.148 371 18 0 1 371 1 371 0.0 730
MS.gene032026.t1 MTR_3g069520 85.255 373 49 3 1 371 1 369 0.0 639
MS.gene032026.t1 MTR_3g448360 81.233 373 66 3 1 371 1 371 0.0 616
MS.gene032026.t1 MTR_2g079090 68.449 374 100 7 1 371 1 359 5.95e-179 501
MS.gene032026.t1 MTR_0029s0050 68.449 374 100 7 1 371 1 359 1.44e-177 498
MS.gene032026.t1 MTR_2g079080 67.647 374 103 7 1 371 1 359 2.15e-176 494
MS.gene032026.t1 MTR_3g463960 63.918 388 122 5 1 371 2 388 3.81e-176 495
MS.gene032026.t1 MTR_3g463950 63.918 388 122 5 1 371 2 388 3.81e-176 495
MS.gene032026.t1 MTR_3g463970 63.918 388 122 5 1 371 2 388 3.81e-176 495
MS.gene032026.t1 MTR_3g463940 63.918 388 122 5 1 371 2 388 3.81e-176 495
MS.gene032026.t1 MTR_0029s0100 67.914 374 102 7 1 371 1 359 4.35e-175 491
MS.gene032026.t1 MTR_3g463930 61.616 396 125 7 1 371 2 395 3.36e-167 473
MS.gene032026.t1 MTR_2g043980 58.933 375 130 7 1 371 7 361 2.45e-151 431
MS.gene032026.t1 MTR_2g015650 52.151 372 170 5 5 371 6 374 1.61e-128 374
MS.gene032026.t1 MTR_2g015670 49.861 361 161 7 15 371 16 360 9.60e-115 338
MS.gene032026.t1 MTR_2g015630 46.512 344 168 7 35 368 36 373 8.46e-101 303
MS.gene032026.t1 MTR_2g015580 45.058 344 177 4 28 364 45 383 7.60e-100 301
MS.gene032026.t1 MTR_2g043990 51.351 296 113 6 1 292 69 337 5.71e-95 287
MS.gene032026.t1 MTR_2g015590 43.860 342 179 7 28 361 29 365 3.05e-91 278
MS.gene032026.t1 MTR_3g466240 57.014 221 62 3 104 319 2 194 5.88e-76 233
MS.gene032026.t1 MTR_4g104240 38.329 347 187 12 27 361 36 367 8.70e-71 226
MS.gene032026.t1 MTR_2g015590 44.322 273 143 5 28 293 29 299 2.36e-67 216
MS.gene032026.t1 MTR_3g466190 66.867 166 36 3 58 223 7 153 3.14e-65 207
MS.gene032026.t1 MTR_3g466190 78.205 78 17 0 294 371 152 229 3.92e-37 134
MS.gene032026.t1 MTR_8g028160 33.687 377 216 15 6 361 11 374 4.67e-51 175
MS.gene032026.t1 MTR_7g087190 32.718 379 211 14 18 371 31 390 5.91e-51 175
MS.gene032026.t1 MTR_7g116870 33.889 360 202 13 28 369 31 372 5.62e-49 169
MS.gene032026.t1 MTR_1g030340 32.997 397 209 15 4 371 18 386 3.82e-47 165
MS.gene032026.t1 MTR_1g030220 33.613 357 202 11 28 364 38 379 6.66e-47 164
MS.gene032026.t1 MTR_7g111780 33.140 344 199 13 30 363 36 358 7.25e-47 163
MS.gene032026.t1 MTR_1g030268 34.358 358 196 14 28 364 38 377 7.54e-46 161
MS.gene032026.t1 MTR_7g113860 33.056 360 199 14 26 361 25 366 7.89e-46 161
MS.gene032026.t1 MTR_8g089805 32.033 359 206 12 28 363 38 381 2.60e-45 160
MS.gene032026.t1 MTR_7g113860 30.469 384 223 15 2 361 9 372 3.66e-45 159
MS.gene032026.t1 MTR_1g030230 33.696 368 201 14 20 363 22 370 5.76e-44 156
MS.gene032026.t1 MTR_7g033165 31.856 361 200 11 28 362 31 371 2.94e-43 154
MS.gene032026.t1 MTR_7g033155 32.383 386 194 15 22 363 30 392 8.82e-43 154
MS.gene032026.t1 MTR_7g033150 31.746 378 206 14 20 366 25 381 3.36e-42 152
MS.gene032026.t1 MTR_6g007090 32.394 355 214 11 20 361 29 370 9.15e-42 150
MS.gene032026.t1 MTR_1g030275 34.349 361 190 16 28 363 37 375 4.53e-40 146
MS.gene032026.t1 MTR_6g007095 31.088 386 230 13 1 367 7 375 3.16e-39 148
MS.gene032026.t1 MTR_6g007095 27.577 359 228 12 18 363 351 690 3.14e-28 116
MS.gene032026.t1 MTR_1g082390 31.092 357 207 15 20 354 21 360 1.11e-38 142
MS.gene032026.t1 MTR_8g038680 30.141 355 211 14 28 361 26 364 4.93e-37 137
MS.gene032026.t1 MTR_1g030268 33.692 279 159 10 28 293 38 303 3.41e-34 129
MS.gene032026.t1 MTR_7g111780 32.707 266 158 10 111 363 2 259 9.98e-34 126
MS.gene032026.t1 MTR_8g022810 31.395 344 183 17 29 350 40 352 6.38e-33 126
MS.gene032026.t1 MTR_3g052490 30.749 374 216 15 3 362 12 356 5.28e-31 121
MS.gene032026.t1 MTR_4g056280 29.651 344 215 10 19 354 20 344 6.78e-31 120
MS.gene032026.t1 MTR_4g056160 28.743 334 213 9 30 354 27 344 9.75e-31 120
MS.gene032026.t1 MTR_6g007100 30.899 356 200 15 28 367 31 356 2.23e-30 119
MS.gene032026.t1 MTR_8g031390 28.529 340 212 14 25 356 32 348 3.00e-30 119
MS.gene032026.t1 MTR_2g033930 30.060 336 206 11 30 356 32 347 4.66e-30 118
MS.gene032026.t1 MTR_1g030265 31.629 313 175 13 81 371 53 348 4.84e-30 118
MS.gene032026.t1 MTR_8g031430 28.989 376 224 17 4 363 14 362 1.22e-29 117
MS.gene032026.t1 MTR_8g031420 27.368 380 234 14 2 363 5 360 2.49e-29 116
MS.gene032026.t1 MTR_7g033165 32.090 268 154 7 28 279 31 286 3.26e-29 115
MS.gene032026.t1 MTR_1g025680 30.178 338 202 13 30 355 34 349 3.88e-29 117
MS.gene032026.t1 MTR_4g122200 29.348 368 211 14 20 369 27 363 1.32e-28 114
MS.gene032026.t1 MTR_1g025720 29.641 334 196 12 28 347 35 343 3.09e-28 113
MS.gene032026.t1 MTR_1g025780 28.614 339 204 14 30 355 41 354 9.19e-28 112
MS.gene032026.t1 MTR_8g014910 28.022 364 223 14 3 354 11 347 1.20e-27 112
MS.gene032026.t1 MTR_3g005650 27.778 342 214 13 30 361 30 348 1.26e-27 112
MS.gene032026.t1 MTR_7g113860 28.990 307 178 13 79 361 8 298 1.47e-27 110
MS.gene032026.t1 MTR_1g025700 30.205 341 197 13 30 355 50 364 1.62e-27 112
MS.gene032026.t1 MTR_3g098270 29.651 344 207 13 28 357 32 354 2.19e-27 111
MS.gene032026.t1 MTR_2g015080 29.429 333 200 15 34 349 42 356 1.46e-26 109
MS.gene032026.t1 MTR_8g089805 28.094 299 184 10 86 363 25 313 2.14e-26 107
MS.gene032026.t1 MTR_3g052580 29.769 346 208 14 30 362 28 351 3.18e-26 108
MS.gene032026.t1 MTR_3g052480 30.058 346 205 14 30 360 33 356 3.88e-26 108
MS.gene032026.t1 MTR_3g052580 29.759 373 219 17 3 362 8 350 4.04e-26 108
MS.gene032026.t1 MTR_5g078210 27.273 341 204 12 34 358 29 341 4.35e-26 107
MS.gene032026.t1 MTR_2g100620 27.761 335 213 12 30 354 31 346 4.93e-26 107
MS.gene032026.t1 MTR_8g031400 28.613 346 205 14 25 356 32 349 6.63e-26 107
MS.gene032026.t1 MTR_2g033920 28.696 345 203 12 29 356 34 352 1.13e-25 106
MS.gene032026.t1 MTR_8g031390 29.000 300 186 13 25 320 32 308 2.34e-25 105
MS.gene032026.t1 MTR_8g012540 29.909 331 189 15 28 334 26 337 3.19e-25 105
MS.gene032026.t1 MTR_1g025760 29.290 338 205 12 30 355 80 395 4.62e-25 105
MS.gene032026.t1 MTR_5g009100 27.859 341 210 14 32 359 48 365 6.79e-25 104
MS.gene032026.t1 MTR_4g035353 25.000 356 235 11 18 361 19 354 1.74e-24 103
MS.gene032026.t1 MTR_8g079050 29.199 387 216 19 3 362 11 366 1.81e-24 103
MS.gene032026.t1 MTR_5g022630 28.406 345 217 11 16 349 29 354 2.28e-24 103
MS.gene032026.t1 MTR_4g087985 28.080 349 213 13 29 356 35 366 2.43e-24 102
MS.gene032026.t1 MTR_3g082830 27.596 337 220 11 30 359 38 357 2.47e-24 102
MS.gene032026.t1 MTR_3g464730 28.415 366 228 16 1 355 2 344 6.39e-24 101
MS.gene032026.t1 MTR_5g084750 28.242 347 205 13 30 359 30 349 9.24e-24 101
MS.gene032026.t1 MTR_5g084770 29.429 350 204 14 21 354 21 343 1.60e-23 100
MS.gene032026.t1 MTR_8g087890 26.506 332 209 13 32 351 33 341 1.00e-22 98.2
MS.gene032026.t1 MTR_3g435540 28.022 364 207 15 32 367 25 361 1.24e-22 98.2
MS.gene032026.t1 MTR_3g114090 29.651 344 204 16 26 355 32 351 1.50e-22 97.8
MS.gene032026.t1 MTR_5g074270 27.485 342 204 14 28 351 31 346 2.10e-22 97.4
MS.gene032026.t1 MTR_5g078210 27.492 331 186 12 34 351 29 318 2.52e-22 96.7
MS.gene032026.t1 MTR_7g116510 29.155 343 212 15 29 360 24 346 4.12e-22 96.7
MS.gene032026.t1 MTR_5g022640 26.331 357 231 10 9 355 25 359 4.28e-22 96.7
MS.gene032026.t1 MTR_5g083040 26.225 347 220 14 30 360 32 358 4.28e-22 96.7
MS.gene032026.t1 MTR_2g044100 27.066 351 220 15 23 359 36 364 4.71e-22 97.1
MS.gene032026.t1 MTR_5g084790 27.893 337 219 11 30 359 32 351 6.31e-22 95.9
MS.gene032026.t1 MTR_1g025910 28.657 335 199 14 35 355 41 349 7.17e-22 96.3
MS.gene032026.t1 MTR_1g060490 26.269 335 201 12 27 349 34 334 8.73e-22 95.5
MS.gene032026.t1 MTR_1g024890 28.000 350 222 13 23 361 25 355 1.14e-21 95.5
MS.gene032026.t1 MTR_7g116520 26.934 349 215 15 29 361 33 357 2.42e-21 94.4
MS.gene032026.t1 MTR_0565s0010 24.324 333 216 14 32 351 34 343 5.85e-21 93.2
MS.gene032026.t1 MTR_4g108690 27.566 341 203 14 32 355 29 342 7.32e-21 93.2
MS.gene032026.t1 MTR_8g075200 26.720 378 231 15 1 355 2 356 1.03e-20 93.2
MS.gene032026.t1 MTR_1g060500 26.149 348 201 16 27 353 37 349 3.24e-20 91.3
MS.gene032026.t1 MTR_7g104220 26.567 335 201 14 31 353 43 344 7.69e-20 90.1
MS.gene032026.t1 MTR_0009s0250 26.761 284 178 9 30 306 33 293 8.34e-20 89.7
MS.gene032026.t1 MTR_1g079540 27.507 349 213 12 27 360 28 351 9.45e-20 89.7
MS.gene032026.t1 MTR_3g005660 26.061 330 217 13 32 351 38 350 3.40e-19 88.2
MS.gene032026.t1 MTR_5g093090 26.273 373 233 13 6 362 6 352 5.39e-19 87.8
MS.gene032026.t1 MTR_8g075220 24.802 379 242 13 1 355 1 360 7.23e-19 87.4
MS.gene032026.t1 MTR_8g022790 26.239 343 213 12 25 356 32 345 1.31e-18 86.7
MS.gene032026.t1 MTR_3g114120 27.327 333 207 16 30 350 47 356 1.57e-18 86.3
MS.gene032026.t1 MTR_2g084585 25.000 336 220 11 30 354 30 344 6.68e-18 84.3
MS.gene032026.t1 MTR_8g022810 33.014 209 107 10 29 221 40 231 3.57e-17 82.0
MS.gene032026.t1 MTR_2g033920 27.338 278 173 9 29 293 34 295 6.02e-17 81.3
MS.gene032026.t1 MTR_4g019880 25.806 372 234 16 2 360 12 354 6.56e-17 81.6
MS.gene032026.t1 MTR_1g079530 27.027 370 213 19 3 356 11 339 1.02e-15 78.2
MS.gene032026.t1 MTR_1g092750 23.780 328 211 11 31 349 41 338 1.86e-15 77.0
MS.gene032026.t1 MTR_3g024510 24.096 332 217 14 32 351 40 348 1.93e-15 77.4
MS.gene032026.t1 MTR_3g023220 24.615 325 202 12 31 345 34 325 2.21e-15 77.0
MS.gene032026.t1 MTR_2g461580 23.907 343 213 12 30 359 31 338 2.24e-15 77.0
MS.gene032026.t1 MTR_3g021460 23.392 342 210 12 30 356 31 335 9.78e-15 75.1
MS.gene032026.t1 MTR_1g092740 23.547 344 203 13 31 353 39 343 1.42e-14 74.7
MS.gene032026.t1 MTR_8g074570 24.713 348 210 13 31 356 39 356 4.69e-14 73.2
MS.gene032026.t1 MTR_5g093090 25.490 306 193 10 6 295 6 292 3.69e-12 67.0
MS.gene032026.t1 MTR_2g017875 26.586 331 192 17 31 344 35 331 1.15e-11 65.9
MS.gene032026.t1 MTR_2g017965 25.000 352 210 18 31 361 34 352 2.47e-11 65.1
MS.gene032026.t1 MTR_8g087870 25.723 346 209 16 31 361 30 342 3.78e-11 64.3
MS.gene032026.t1 MTR_6g049220 39.423 104 56 5 19 118 20 120 6.35e-11 61.2
MS.gene032026.t1 MTR_1g092690 22.059 340 217 13 21 349 45 347 7.56e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032026.t1 AT5G45910 44.063 379 186 9 1 362 1 370 3.33e-104 311
MS.gene032026.t1 AT1G28610 42.857 343 180 9 29 362 30 365 1.80e-87 269
MS.gene032026.t1 AT1G31550 40.379 369 203 11 3 361 8 369 2.38e-85 264
MS.gene032026.t1 AT1G28570 42.274 343 183 9 28 361 32 368 5.28e-83 258
MS.gene032026.t1 AT1G28670 40.805 348 186 10 28 363 33 372 6.98e-82 255
MS.gene032026.t1 AT1G28580 40.525 343 189 9 28 361 35 371 8.06e-82 255
MS.gene032026.t1 AT1G31550 39.837 369 202 12 3 361 8 366 1.20e-81 254
MS.gene032026.t1 AT1G28660 41.379 348 183 11 28 363 33 371 2.56e-81 253
MS.gene032026.t1 AT1G28600 40.000 360 193 9 15 361 15 364 2.76e-81 254
MS.gene032026.t1 AT1G28640 40.058 347 189 9 28 363 33 371 3.25e-81 253
MS.gene032026.t1 AT1G28590 40.173 346 192 9 28 364 34 373 5.03e-81 253
MS.gene032026.t1 AT2G27360 41.279 344 186 9 28 361 31 368 1.01e-80 252
MS.gene032026.t1 AT1G28660 41.379 348 182 12 28 363 33 370 2.12e-80 251
MS.gene032026.t1 AT1G28650 40.058 347 189 9 28 363 35 373 6.47e-79 247
MS.gene032026.t1 AT3G48460 37.429 350 188 11 27 361 35 368 3.51e-64 209
MS.gene032026.t1 AT1G28580 38.356 292 168 7 76 361 5 290 2.90e-63 204
MS.gene032026.t1 AT4G01130 32.865 356 202 12 28 361 32 372 3.99e-49 170
MS.gene032026.t1 AT1G28570 41.038 212 118 4 154 361 88 296 8.17e-49 167
MS.gene032026.t1 AT5G03980 33.721 344 176 9 15 353 14 310 1.98e-48 166
MS.gene032026.t1 AT1G28570 41.346 208 115 4 158 361 1 205 2.94e-48 163
MS.gene032026.t1 AT1G54790 32.597 362 198 14 26 361 28 369 1.08e-47 166
MS.gene032026.t1 AT5G14450 31.793 368 206 14 28 371 39 385 1.99e-45 160
MS.gene032026.t1 AT1G56670 32.022 356 197 14 30 368 40 367 2.46e-45 160
MS.gene032026.t1 AT1G67830 32.410 361 200 14 21 353 21 365 1.10e-44 158
MS.gene032026.t1 AT3G62280 31.250 352 212 11 18 361 28 357 1.02e-43 155
MS.gene032026.t1 AT3G05180 33.148 359 192 16 28 359 34 371 1.19e-43 155
MS.gene032026.t1 AT1G54790 30.978 368 208 14 20 361 21 368 3.21e-43 154
MS.gene032026.t1 AT1G09390 31.161 353 204 13 30 368 37 364 1.17e-41 150
MS.gene032026.t1 AT1G54790 29.487 390 211 15 20 361 21 394 3.73e-40 147
MS.gene032026.t1 AT3G26430 30.790 367 213 13 28 371 29 377 4.70e-39 143
MS.gene032026.t1 AT1G28600 39.801 201 103 6 15 204 15 208 1.53e-35 129
MS.gene032026.t1 AT4G01130 32.734 278 164 8 28 293 32 298 1.98e-34 130
MS.gene032026.t1 AT1G28610 42.222 180 87 7 29 198 30 202 3.46e-34 127
MS.gene032026.t1 AT1G71120 29.532 342 196 13 30 356 31 342 2.87e-31 122
MS.gene032026.t1 AT3G27950 28.836 378 222 13 9 363 11 364 4.89e-30 119
MS.gene032026.t1 AT1G56670 30.824 279 157 10 30 293 40 297 6.09e-30 117
MS.gene032026.t1 AT4G10950 27.566 341 218 12 26 356 66 387 1.21e-29 118
MS.gene032026.t1 AT5G45950 29.730 333 202 12 30 354 40 348 3.65e-29 116
MS.gene032026.t1 AT2G40250 28.291 357 213 14 21 358 26 358 5.06e-29 115
MS.gene032026.t1 AT1G75920 28.962 366 214 12 1 355 6 336 1.04e-28 114
MS.gene032026.t1 AT1G23500 26.184 359 230 12 5 356 9 339 1.07e-28 114
MS.gene032026.t1 AT1G73610 27.545 334 205 12 29 355 34 337 8.47e-28 112
MS.gene032026.t1 AT1G71250 26.979 341 223 11 30 361 41 364 2.10e-27 111
MS.gene032026.t1 AT4G01130 28.523 298 179 11 86 361 1 286 2.76e-27 109
MS.gene032026.t1 AT1G20120 27.586 348 211 12 28 358 76 399 3.28e-27 111
MS.gene032026.t1 AT1G06990 27.841 352 219 12 20 358 27 356 3.66e-27 110
MS.gene032026.t1 AT4G10950 27.273 341 215 13 26 356 66 383 4.66e-27 111
MS.gene032026.t1 AT1G75880 28.443 334 214 13 30 355 52 368 8.03e-27 110
MS.gene032026.t1 AT1G53920 29.609 358 208 17 30 370 48 378 1.42e-26 109
MS.gene032026.t1 AT5G63170 27.914 326 195 12 30 346 28 322 5.86e-26 107
MS.gene032026.t1 AT2G03980 29.483 329 198 12 28 345 41 346 6.40e-26 107
MS.gene032026.t1 AT2G03980 29.483 329 198 12 28 345 41 346 6.40e-26 107
MS.gene032026.t1 AT2G03980 29.483 329 198 12 28 345 41 346 6.40e-26 107
MS.gene032026.t1 AT2G03980 29.483 329 198 12 28 345 41 346 6.40e-26 107
MS.gene032026.t1 AT3G62280 29.391 279 173 8 21 293 31 291 9.66e-26 105
MS.gene032026.t1 AT5G08460 28.012 332 203 12 28 344 47 357 1.13e-25 107
MS.gene032026.t1 AT1G20135 27.410 332 199 13 28 349 27 326 2.33e-25 105
MS.gene032026.t1 AT1G75890 28.657 335 212 14 30 355 47 363 3.99e-25 105
MS.gene032026.t1 AT1G75920 28.084 381 213 13 1 355 1 346 4.10e-25 105
MS.gene032026.t1 AT2G23540 28.684 380 221 15 1 356 18 371 4.11e-25 105
MS.gene032026.t1 AT1G75880 29.464 336 207 15 30 355 52 367 4.74e-25 105
MS.gene032026.t1 AT2G42990 28.182 330 209 12 30 350 28 338 5.85e-25 104
MS.gene032026.t1 AT5G40990 29.459 370 223 16 4 357 11 358 9.00e-25 104
MS.gene032026.t1 AT1G75890 28.657 335 212 14 30 355 76 392 1.06e-24 104
MS.gene032026.t1 AT1G75910 26.039 361 224 13 9 355 5 336 1.33e-24 103
MS.gene032026.t1 AT5G15720 27.083 336 207 13 30 350 30 342 1.63e-24 103
MS.gene032026.t1 AT3G14225 28.530 347 208 15 30 357 37 362 2.03e-24 103
MS.gene032026.t1 AT1G75930 29.915 351 186 16 28 353 27 342 2.04e-24 102
MS.gene032026.t1 AT1G75920 29.355 310 179 11 57 355 28 308 2.44e-24 102
MS.gene032026.t1 AT1G20132 27.353 340 209 14 30 355 61 376 5.99e-24 102
MS.gene032026.t1 AT1G53940 30.904 343 203 14 29 357 38 360 9.46e-24 101
MS.gene032026.t1 AT3G16370 26.648 349 227 11 20 359 22 350 1.11e-23 100
MS.gene032026.t1 AT3G14225 28.242 347 205 15 30 357 37 358 1.63e-23 100
MS.gene032026.t1 AT5G45960 26.269 335 219 11 30 353 47 364 4.18e-23 99.8
MS.gene032026.t1 AT3G04290 28.529 340 217 10 29 360 28 349 5.56e-23 99.4
MS.gene032026.t1 AT2G04570 26.087 345 217 12 30 360 28 348 7.96e-23 98.6
MS.gene032026.t1 AT1G59406 27.473 364 233 14 1 355 1 342 9.76e-23 98.2
MS.gene032026.t1 AT1G59030 27.473 364 233 14 1 355 1 342 9.76e-23 98.2
MS.gene032026.t1 AT1G58725 27.473 364 233 14 1 355 1 342 9.76e-23 98.2
MS.gene032026.t1 AT1G75890 28.035 346 213 15 30 355 47 376 1.41e-22 98.2
MS.gene032026.t1 AT5G42170 27.761 335 209 12 30 354 50 361 1.43e-22 98.2
MS.gene032026.t1 AT1G29670 26.524 328 213 11 32 351 34 341 1.97e-22 97.4
MS.gene032026.t1 AT5G33370 26.801 347 214 14 29 360 29 350 2.73e-22 97.1
MS.gene032026.t1 AT3G09930 26.844 339 211 11 21 349 30 341 2.88e-22 97.1
MS.gene032026.t1 AT3G09930 26.844 339 211 11 21 349 30 341 2.88e-22 97.1
MS.gene032026.t1 AT4G26790 26.409 337 220 11 28 355 27 344 6.23e-22 95.9
MS.gene032026.t1 AT4G26790 26.409 337 220 11 28 355 27 344 6.23e-22 95.9
MS.gene032026.t1 AT2G30310 28.969 359 223 17 5 350 7 346 7.34e-22 95.9
MS.gene032026.t1 AT1G29670 26.829 328 212 11 32 351 102 409 8.15e-22 96.7
MS.gene032026.t1 AT5G03820 26.005 373 230 17 1 354 4 349 1.35e-21 95.1
MS.gene032026.t1 AT3G50400 27.979 386 220 16 1 356 1 358 2.26e-21 94.7
MS.gene032026.t1 AT4G28780 27.697 343 216 15 29 360 30 351 2.97e-21 94.4
MS.gene032026.t1 AT5G03820 26.005 373 230 17 1 354 32 377 3.06e-21 94.4
MS.gene032026.t1 AT5G22810 27.473 364 234 15 1 354 8 351 3.41e-21 94.0
MS.gene032026.t1 AT2G31540 28.531 354 223 15 18 358 22 358 7.84e-21 92.8
MS.gene032026.t1 AT1G54000 26.765 340 202 14 27 353 33 338 8.68e-21 93.2
MS.gene032026.t1 AT2G19010 28.863 343 196 17 32 361 32 339 1.66e-20 92.0
MS.gene032026.t1 AT5G37690 25.223 337 206 13 34 353 31 338 1.86e-20 91.7
MS.gene032026.t1 AT2G19010 28.125 384 218 19 1 361 21 369 1.96e-20 92.0
MS.gene032026.t1 AT1G29660 26.727 333 207 17 32 351 34 342 2.60e-20 91.7
MS.gene032026.t1 AT1G74460 26.567 335 214 10 32 355 25 338 3.51e-20 91.3
MS.gene032026.t1 AT5G18430 25.575 348 219 13 29 360 27 350 6.48e-20 90.5
MS.gene032026.t1 AT1G54020 25.843 356 217 16 6 350 8 327 7.93e-20 90.1
MS.gene032026.t1 AT1G58520 27.647 340 198 13 30 355 30 335 9.16e-20 89.7
MS.gene032026.t1 AT1G58525 27.647 340 198 13 30 355 30 335 9.16e-20 89.7
MS.gene032026.t1 AT1G53990 26.287 369 231 15 3 357 8 349 9.34e-20 90.1
MS.gene032026.t1 AT5G03610 24.269 342 219 10 25 355 38 350 9.41e-20 89.7
MS.gene032026.t1 AT1G75900 27.027 333 216 13 30 354 43 356 1.41e-19 89.4
MS.gene032026.t1 AT1G54010 27.027 333 196 15 26 345 32 330 1.43e-19 89.7
MS.gene032026.t1 AT5G15720 25.806 279 176 9 30 293 30 292 2.31e-19 88.2
MS.gene032026.t1 AT1G20130 25.948 343 217 12 30 355 204 526 2.95e-19 89.7
MS.gene032026.t1 AT1G20130 25.948 343 217 12 30 355 184 506 5.12e-19 89.0
MS.gene032026.t1 AT5G41890 26.087 368 230 12 11 356 12 359 1.41e-18 86.7
MS.gene032026.t1 AT1G33811 25.364 343 228 13 31 361 35 361 2.01e-18 86.3
MS.gene032026.t1 AT3G53100 24.702 336 221 12 30 354 29 343 2.05e-18 85.9
MS.gene032026.t1 AT2G30220 27.374 358 229 15 5 350 7 345 5.61e-18 84.7
MS.gene032026.t1 AT2G24560 26.479 355 232 15 21 364 24 360 7.43e-18 84.3
MS.gene032026.t1 AT1G75920 26.575 365 193 13 1 355 6 305 7.77e-18 83.6
MS.gene032026.t1 AT2G19060 27.378 347 198 17 32 359 32 343 9.32e-18 84.0
MS.gene032026.t1 AT3G14820 26.786 336 210 12 30 354 32 342 2.13e-17 82.8
MS.gene032026.t1 AT5G55050 27.920 351 212 15 30 362 39 366 8.26e-17 81.3
MS.gene032026.t1 AT3G14210 26.316 342 205 16 26 353 32 340 1.49e-16 80.9
MS.gene032026.t1 AT1G53940 31.273 275 164 11 29 293 38 297 2.17e-16 79.3
MS.gene032026.t1 AT5G03600 23.867 331 216 10 24 349 8 307 2.32e-16 79.7
MS.gene032026.t1 AT5G03600 23.513 353 227 11 9 349 21 342 2.62e-16 79.7
MS.gene032026.t1 AT2G19050 24.412 340 215 11 32 359 33 342 9.50e-16 78.2
MS.gene032026.t1 AT5G37690 24.478 335 203 14 34 353 31 330 1.67e-15 77.4
MS.gene032026.t1 AT2G36325 24.773 331 215 11 31 354 48 351 5.38e-15 75.9
MS.gene032026.t1 AT5G45670 23.952 334 216 14 32 351 31 340 7.06e-15 75.5
MS.gene032026.t1 AT5G33370 25.357 280 176 11 29 293 29 290 5.49e-13 69.7
MS.gene032026.t1 AT2G24560 27.875 287 179 13 21 293 24 296 8.46e-13 68.9
MS.gene032026.t1 AT3G43550 27.076 277 169 10 30 293 30 286 1.39e-12 68.2
MS.gene032026.t1 AT2G31550 28.019 207 128 8 161 358 23 217 1.47e-12 67.0
MS.gene032026.t1 AT2G04020 29.439 214 132 10 28 232 41 244 2.99e-12 66.6
MS.gene032026.t1 AT4G16230 26.923 234 147 8 1 221 3 225 7.43e-12 65.5
MS.gene032026.t1 AT2G04020 30.000 210 128 10 28 228 41 240 8.66e-12 65.9

Find 62 sgRNAs with CRISPR-Local

Find 103 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCTTCAAAACTAATAAAT+TGG 0.141859 3.4:-69666802 MS.gene032026:CDS
AAAGAAGACTATGACGAATT+TGG 0.244838 3.4:-69667191 MS.gene032026:CDS
TCAGAGCAAACTGTTGTATT+TGG 0.251645 3.4:+69666824 None:intergenic
GTGATCAAATGCAGCATTTC+CGG 0.268623 3.4:+69668217 None:intergenic
CATTAAATGTGCAATTTGAT+TGG 0.321915 3.4:-69667752 MS.gene032026:CDS
ATGAAGATCTTCATTCTGTT+TGG 0.357199 3.4:-69668338 MS.gene032026:CDS
AAAGCATGTTGTGGAGGAAT+TGG 0.363705 3.4:-69666881 MS.gene032026:CDS
TGCACATTTAATGATTCCTT+TGG 0.373985 3.4:+69667762 None:intergenic
AGAGTCACCGAAGTTGAATA+TGG 0.389848 3.4:+69668250 None:intergenic
ACGAGAGATAGTTCCCTTGA+TGG 0.390493 3.4:-69667499 MS.gene032026:CDS
GCGGTAGAGCTAGTGGTTCC+AGG 0.394718 3.4:-69667269 MS.gene032026:CDS
TTAATTGTAGCTGAGGCATA+TGG 0.396651 3.4:-69667918 MS.gene032026:intron
GACATCAAGTGCAGTTGAAC+CGG 0.404703 3.4:+69667818 None:intergenic
CAATACTGATCATGATGATA+TGG 0.409129 3.4:+69666857 None:intergenic
TATTTGCTTATAAGCGGCTT+CGG 0.415948 3.4:+69666763 None:intergenic
AAACAGAATGAAGATCTTCA+TGG 0.420108 3.4:+69668340 None:intergenic
TTGAAGTATGTTGAACCATA+AGG 0.422999 3.4:+69668170 None:intergenic
TCCTTCAAAACTAATAAATT+GGG 0.433608 3.4:-69666801 MS.gene032026:CDS
CGACTCATCATAGATTTCAT+AGG 0.433635 3.4:-69668119 MS.gene032026:intron
ATTTGATCACCTCAAAGAAA+TGG 0.440475 3.4:-69668204 MS.gene032026:CDS
TTGTTTATAGTGGGAGAGAT+TGG 0.442235 3.4:-69667567 MS.gene032026:CDS
TTTGATTGATTCAACCATCA+AGG 0.454594 3.4:+69667485 None:intergenic
CCATCAGGACGCATGTCAAA+TGG 0.466839 3.4:-69668143 MS.gene032026:CDS
TATCAAGCACCACAACAGTA+TGG 0.472277 3.4:-69667035 MS.gene032026:intron
TGTCAGGCTTTAATTGAAGA+AGG 0.476299 3.4:-69667293 MS.gene032026:intron
TAAGCTATCTTGAAAGGAGC+AGG 0.481547 3.4:+69666695 None:intergenic
CATATCATCATGATCAGTAT+TGG 0.482301 3.4:-69666856 MS.gene032026:CDS
TTTAGAGAAGGATATGCAAA+AGG 0.485906 3.4:+69666719 None:intergenic
AATATACTATCTTAGCTTGA+GGG 0.487430 3.4:+69667087 None:intergenic
CACCCCATTGGAAAGTTCCC+TGG 0.497541 3.4:+69667251 None:intergenic
GACTTATGTAAAAGCAAAGA+AGG 0.499168 3.4:-69667711 MS.gene032026:intron
GCTTATAAGCAAATAGCTAA+AGG 0.500430 3.4:-69666755 MS.gene032026:CDS
GTTCCAGGGAACTTTCCAAT+GGG 0.514992 3.4:-69667254 MS.gene032026:CDS
TTTATAGTGGGAGAGATTGG+TGG 0.518109 3.4:-69667564 MS.gene032026:CDS
TAATTGTAGCTGAGGCATAT+GGG 0.522458 3.4:-69667917 MS.gene032026:intron
CAACTCTAAGCTATCTTGAA+AGG 0.524346 3.4:+69666689 None:intergenic
TTTAGCTATTTGCTTATAAG+CGG 0.529705 3.4:+69666757 None:intergenic
TTGATTGATTCAACCATCAA+GGG 0.530384 3.4:+69667486 None:intergenic
TGGTGCTTGATATAAACGTC+TGG 0.541930 3.4:+69667046 None:intergenic
CCATTTGACATGCGTCCTGA+TGG 0.543757 3.4:+69668143 None:intergenic
ACATACTTCAAACATCCATC+AGG 0.546171 3.4:-69668158 MS.gene032026:CDS
AATATGGCTTCATACGGTAG+AGG 0.557506 3.4:+69668266 None:intergenic
TTTGGTATCACCTTTGCATG+TGG 0.561909 3.4:-69668320 MS.gene032026:CDS
GGTTCCAGGGAACTTTCCAA+TGG 0.563863 3.4:-69667255 MS.gene032026:CDS
TTGGTGATATTCTTATAGGC+CGG 0.575246 3.4:+69667882 None:intergenic
CGGTAGAGCTAGTGGTTCCA+GGG 0.577023 3.4:-69667268 MS.gene032026:CDS
ATAGCTAAAGGTTTAATCGA+AGG 0.579347 3.4:-69666743 MS.gene032026:CDS
TCAAAACTAATAAATTGGGA+TGG 0.581957 3.4:-69666797 MS.gene032026:CDS
GGTGACTCTACAAGTGATAC+CGG 0.585156 3.4:-69668236 MS.gene032026:CDS
AGAAGGAGCGGTAGAGCTAG+TGG 0.586129 3.4:-69667276 MS.gene032026:CDS
AAATATACTATCTTAGCTTG+AGG 0.588022 3.4:+69667086 None:intergenic
ATTTGTATAACATACATTGG+TGG 0.593190 3.4:+69667458 None:intergenic
GGAGTTAATTTCGCTTACGC+CGG 0.599725 3.4:-69667837 MS.gene032026:CDS
GGCTTTAATTGAAGAAGGAG+CGG 0.599772 3.4:-69667288 MS.gene032026:CDS
TAGTGGAGTCACTGCACCAA+AGG 0.599833 3.4:-69667778 MS.gene032026:CDS
CATCATGATCAGTATTGGTG+TGG 0.600970 3.4:-69666851 MS.gene032026:CDS
ATGTCAGTATTACACCCCAT+TGG 0.600994 3.4:+69667239 None:intergenic
AAGTTGAATATGGCTTCATA+CGG 0.613834 3.4:+69668260 None:intergenic
TATGAAGCCATATTCAACTT+CGG 0.629345 3.4:-69668257 MS.gene032026:CDS
CTCCACACACCATACTGTTG+TGG 0.629875 3.4:+69667026 None:intergenic
TTCCAGGGAACTTTCCAATG+GGG 0.642288 3.4:-69667253 MS.gene032026:CDS
TAAGCGGCTTCGGTAAAATG+TGG 0.667134 3.4:+69666773 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACAATGAAAATTTAACA+AGG + chr3.4:69668046-69668065 None:intergenic 15.0%
!! TTTATTTAATTATGTTTGTC+AGG - chr3.4:69667723-69667742 MS.gene032026:CDS 15.0%
!!! AATAATTGTGTTTAAGTTAT+AGG - chr3.4:69667658-69667677 MS.gene032026:intron 15.0%
!!! CTAAAATAATCTATTTTATG+AGG - chr3.4:69667029-69667048 MS.gene032026:intron 15.0%
!!! TTATTTTTGTGTGATATAAT+TGG - chr3.4:69667366-69667385 MS.gene032026:intron 15.0%
!! AAAAACTCATTGTTTATAGT+GGG - chr3.4:69667456-69667475 MS.gene032026:intron 20.0%
!! AAGATTTGTATAACATACAT+TGG + chr3.4:69667580-69667599 None:intergenic 20.0%
!! AATGTACATAAATTAGTGAA+TGG + chr3.4:69668092-69668111 None:intergenic 20.0%
!! AGGTATTAGTGAATAAATAA+TGG - chr3.4:69667678-69667697 MS.gene032026:intron 20.0%
!! ATCCTTCAAAACTAATAAAT+TGG - chr3.4:69668230-69668249 MS.gene032026:CDS 20.0%
!! ATGGAAAAATTAATTCCTTA+TGG - chr3.4:69666847-69666866 MS.gene032026:CDS 20.0%
!! ATGTACATAAATTAGTGAAT+GGG + chr3.4:69668091-69668110 None:intergenic 20.0%
!! TCCTTCAAAACTAATAAATT+GGG - chr3.4:69668231-69668250 MS.gene032026:CDS 20.0%
!! TTTATGTACATTAATGATGT+AGG - chr3.4:69668100-69668119 MS.gene032026:intron 20.0%
!!! AAATATTTTAGTGGTATTAG+TGG - chr3.4:69667237-69667256 MS.gene032026:CDS 20.0%
!!! ATAGATTATTTTAGAGTTCT+TGG + chr3.4:69667023-69667042 None:intergenic 20.0%
!!! TTAATTTTTCCATTTCTTTG+AGG + chr3.4:69666840-69666859 None:intergenic 20.0%
! AAAATAACATGCAAGGATTT+AGG + chr3.4:69667353-69667372 None:intergenic 25.0%
! AACAAAACAAACGTATTGTT+AGG + chr3.4:69667407-69667426 None:intergenic 25.0%
! ATTTGTATAACATACATTGG+TGG + chr3.4:69667577-69667596 None:intergenic 25.0%
! CAAAAACTCATTGTTTATAG+TGG - chr3.4:69667455-69667474 MS.gene032026:intron 25.0%
! CATTAAATGTGCAATTTGAT+TGG - chr3.4:69667280-69667299 MS.gene032026:CDS 25.0%
! TAGTGAATAAATAATGGTCT+TGG - chr3.4:69667684-69667703 MS.gene032026:intron 25.0%
! TCAAAACTAATAAATTGGGA+TGG - chr3.4:69668235-69668254 MS.gene032026:CDS 25.0%
! TTTAGCTATTTGCTTATAAG+CGG + chr3.4:69668278-69668297 None:intergenic 25.0%
!! AAATATACTATCTTAGCTTG+AGG + chr3.4:69667949-69667968 None:intergenic 25.0%
!! AATATACTATCTTAGCTTGA+GGG + chr3.4:69667948-69667967 None:intergenic 25.0%
!!! CTTGATGTCAAATATTTTAG+TGG - chr3.4:69667228-69667247 MS.gene032026:CDS 25.0%
!!! GATTTTGGTGATATTCTTAT+AGG + chr3.4:69667157-69667176 None:intergenic 25.0%
!!! TCCCAATTTATTAGTTTTGA+AGG + chr3.4:69668235-69668254 None:intergenic 25.0%
!!! TTCTTTGCTTTTACATAAGT+CGG + chr3.4:69667322-69667341 None:intergenic 25.0%
!!! TTTCTGTTTTATTGTCTCTA+TGG + chr3.4:69667923-69667942 None:intergenic 25.0%
AAAGAAGACTATGACGAATT+TGG - chr3.4:69667841-69667860 MS.gene032026:CDS 30.0%
AAGTTGAATATGGCTTCATA+CGG + chr3.4:69666775-69666794 None:intergenic 30.0%
AATCCCAGATGCTATAAAAA+AGG - chr3.4:69667173-69667192 MS.gene032026:CDS 30.0%
ATAGCTAAAGGTTTAATCGA+AGG - chr3.4:69668289-69668308 MS.gene032026:CDS 30.0%
ATCCCAGATGCTATAAAAAA+GGG - chr3.4:69667174-69667193 MS.gene032026:CDS 30.0%
ATGAAGATCTTCATTCTGTT+TGG - chr3.4:69666694-69666713 MS.gene032026:CDS 30.0%
ATTTGATCACCTCAAAGAAA+TGG - chr3.4:69666828-69666847 MS.gene032026:CDS 30.0%
CAATACTGATCATGATGATA+TGG + chr3.4:69668178-69668197 None:intergenic 30.0%
CATATCATCATGATCAGTAT+TGG - chr3.4:69668176-69668195 MS.gene032026:CDS 30.0%
GACTTATGTAAAAGCAAAGA+AGG - chr3.4:69667321-69667340 MS.gene032026:intron 30.0%
GCTTATAAGCAAATAGCTAA+AGG - chr3.4:69668277-69668296 MS.gene032026:CDS 30.0%
TATGAAGCCATATTCAACTT+CGG - chr3.4:69666775-69666794 MS.gene032026:CDS 30.0%
TCACACAAAAATAACATGCA+AGG + chr3.4:69667360-69667379 None:intergenic 30.0%
TGCACATTTAATGATTCCTT+TGG + chr3.4:69667273-69667292 None:intergenic 30.0%
TTGAAGTATGTTGAACCATA+AGG + chr3.4:69666865-69666884 None:intergenic 30.0%
TTTAGAGAAGGATATGCAAA+AGG + chr3.4:69668316-69668335 None:intergenic 30.0%
! GAGCTAGTGAAATTTTCAAT+CGG + chr3.4:69667085-69667104 None:intergenic 30.0%
! TGTAGGTTTTACTTCTGATA+AGG - chr3.4:69668117-69668136 MS.gene032026:intron 30.0%
! TTGATTGATTCAACCATCAA+GGG + chr3.4:69667549-69667568 None:intergenic 30.0%
! TTTGATTGATTCAACCATCA+AGG + chr3.4:69667550-69667569 None:intergenic 30.0%
!! TCTTTGCTTTTACATAAGTC+GGG + chr3.4:69667321-69667340 None:intergenic 30.0%
!! TTTTATAGCATCTGGGATTT+TGG + chr3.4:69667172-69667191 None:intergenic 30.0%
!!! TCTCATTTTAATTGTAGCTG+AGG - chr3.4:69667107-69667126 MS.gene032026:CDS 30.0%
ACATACTTCAAACATCCATC+AGG - chr3.4:69666874-69666893 MS.gene032026:CDS 35.0%
CGACTCATCATAGATTTCAT+AGG - chr3.4:69666913-69666932 MS.gene032026:CDS 35.0%
TAATTGTAGCTGAGGCATAT+GGG - chr3.4:69667115-69667134 MS.gene032026:CDS 35.0%
TATTTGCTTATAAGCGGCTT+CGG + chr3.4:69668272-69668291 None:intergenic 35.0%
TCAGAGCAAACTGTTGTATT+TGG + chr3.4:69668211-69668230 None:intergenic 35.0%
TTAATTGTAGCTGAGGCATA+TGG - chr3.4:69667114-69667133 MS.gene032026:CDS 35.0%
TTCTTATAGGCCGGTAAAAA+TGG + chr3.4:69667144-69667163 None:intergenic 35.0%
! TGTCAGGCTTTAATTGAAGA+AGG - chr3.4:69667739-69667758 MS.gene032026:CDS 35.0%
! TTGGTGATATTCTTATAGGC+CGG + chr3.4:69667153-69667172 None:intergenic 35.0%
! TTGTTTATAGTGGGAGAGAT+TGG - chr3.4:69667465-69667484 MS.gene032026:intron 35.0%
! TTTTACTTCTGATAAGGTCG+AGG - chr3.4:69668123-69668142 MS.gene032026:CDS 35.0%
!!! ACTCCCTTTTTTATAGCATC+TGG + chr3.4:69667180-69667199 None:intergenic 35.0%
!!! ATATGGGTTGCCATTTTTAC+CGG - chr3.4:69667131-69667150 MS.gene032026:CDS 35.0%
!!! CTCCCTTTTTTATAGCATCT+GGG + chr3.4:69667179-69667198 None:intergenic 35.0%
AAAGCATGTTGTGGAGGAAT+TGG - chr3.4:69668151-69668170 MS.gene032026:CDS 40.0%
AATATGGCTTCATACGGTAG+AGG + chr3.4:69666769-69666788 None:intergenic 40.0%
AGAGTCACCGAAGTTGAATA+TGG + chr3.4:69666785-69666804 None:intergenic 40.0%
ATGTCAGTATTACACCCCAT+TGG + chr3.4:69667796-69667815 None:intergenic 40.0%
GTGATCAAATGCAGCATTTC+CGG + chr3.4:69666818-69666837 None:intergenic 40.0%
TAAGCTATCTTGAAAGGAGC+AGG + chr3.4:69668340-69668359 None:intergenic 40.0%
TATCAAGCACCACAACAGTA+TGG - chr3.4:69667997-69668016 MS.gene032026:intron 40.0%
TCCAAAAAAGCCACATGCAA+AGG + chr3.4:69666725-69666744 None:intergenic 40.0%
TGGTGCTTGATATAAACGTC+TGG + chr3.4:69667989-69668008 None:intergenic 40.0%
TTTGGTATCACCTTTGCATG+TGG - chr3.4:69666712-69666731 MS.gene032026:CDS 40.0%
! GGCTTTAATTGAAGAAGGAG+CGG - chr3.4:69667744-69667763 MS.gene032026:CDS 40.0%
! TTTATAGTGGGAGAGATTGG+TGG - chr3.4:69667468-69667487 MS.gene032026:intron 40.0%
!! CATCATGATCAGTATTGGTG+TGG - chr3.4:69668181-69668200 MS.gene032026:CDS 40.0%
!!! AAAGGAGCAGGTTTTAGAGA+AGG + chr3.4:69668328-69668347 None:intergenic 40.0%
!!! ACCTTTGCATGTGGCTTTTT+TGG - chr3.4:69666721-69666740 MS.gene032026:CDS 40.0%
!!! GAGGTTTTGAAAGCATGTTG+TGG - chr3.4:69668142-69668161 MS.gene032026:CDS 40.0%
!!! GTTTTGAAAGCATGTTGTGG+AGG - chr3.4:69668145-69668164 MS.gene032026:CDS 40.0%
ACGAGAGATAGTTCCCTTGA+TGG - chr3.4:69667533-69667552 MS.gene032026:CDS 45.0%
GACATCAAGTGCAGTTGAAC+CGG + chr3.4:69667217-69667236 None:intergenic 45.0%
GGAGTTAATTTCGCTTACGC+CGG - chr3.4:69667195-69667214 MS.gene032026:CDS 45.0%
GGTGACTCTACAAGTGATAC+CGG - chr3.4:69666796-69666815 MS.gene032026:CDS 45.0%
GTTCCAGGGAACTTTCCAAT+GGG - chr3.4:69667778-69667797 MS.gene032026:CDS 45.0%
TAAGCGGCTTCGGTAAAATG+TGG + chr3.4:69668262-69668281 None:intergenic 45.0%
TTCCAGGGAACTTTCCAATG+GGG - chr3.4:69667779-69667798 MS.gene032026:CDS 45.0%
CACCACAACAGTATGGTGTG+TGG - chr3.4:69668004-69668023 MS.gene032026:intron 50.0%
CCATCAGGACGCATGTCAAA+TGG - chr3.4:69666889-69666908 MS.gene032026:CDS 50.0%
CCATTTGACATGCGTCCTGA+TGG + chr3.4:69666892-69666911 None:intergenic 50.0%
CTCCACACACCATACTGTTG+TGG + chr3.4:69668009-69668028 None:intergenic 50.0%
GGTTCCAGGGAACTTTCCAA+TGG - chr3.4:69667777-69667796 MS.gene032026:CDS 50.0%
TAGTGGAGTCACTGCACCAA+AGG - chr3.4:69667254-69667273 MS.gene032026:CDS 50.0%
AGAAGGAGCGGTAGAGCTAG+TGG - chr3.4:69667756-69667775 MS.gene032026:CDS 55.0%
CACCCCATTGGAAAGTTCCC+TGG + chr3.4:69667784-69667803 None:intergenic 55.0%
CGGTAGAGCTAGTGGTTCCA+GGG - chr3.4:69667764-69667783 MS.gene032026:CDS 55.0%
GCGGTAGAGCTAGTGGTTCC+AGG - chr3.4:69667763-69667782 MS.gene032026:CDS 60.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 69666694 69668360 69666694 ID=MS.gene032026
chr3.4 mRNA 69666694 69668360 69666694 ID=MS.gene032026.t1;Parent=MS.gene032026
chr3.4 exon 69668120 69668360 69668120 ID=MS.gene032026.t1.exon1;Parent=MS.gene032026.t1
chr3.4 CDS 69668120 69668360 69668120 ID=cds.MS.gene032026.t1;Parent=MS.gene032026.t1
chr3.4 exon 69667712 69667930 69667712 ID=MS.gene032026.t1.exon2;Parent=MS.gene032026.t1
chr3.4 CDS 69667712 69667930 69667712 ID=cds.MS.gene032026.t1;Parent=MS.gene032026.t1
chr3.4 exon 69667473 69667615 69667473 ID=MS.gene032026.t1.exon3;Parent=MS.gene032026.t1
chr3.4 CDS 69667473 69667615 69667473 ID=cds.MS.gene032026.t1;Parent=MS.gene032026.t1
chr3.4 exon 69667036 69667309 69667036 ID=MS.gene032026.t1.exon4;Parent=MS.gene032026.t1
chr3.4 CDS 69667036 69667309 69667036 ID=cds.MS.gene032026.t1;Parent=MS.gene032026.t1
chr3.4 exon 69666694 69666932 69666694 ID=MS.gene032026.t1.exon5;Parent=MS.gene032026.t1
chr3.4 CDS 69666694 69666932 69666694 ID=cds.MS.gene032026.t1;Parent=MS.gene032026.t1
Gene Sequence

>MS.gene032026

ATGAAGATCTTCATTCTGTTTGGTATCACCTTTGCATGTGGCTTTTTTGGAAACTTTATTTCAAATGCTAATCCTCTACCGTATGAAGCCATATTCAACTTCGGTGACTCTACAAGTGATACCGGAAATGCTGCATTTGATCACCTCAAAGAAATGGAAAAATTAATTCCTTATGGTTCAACATACTTCAAACATCCATCAGGACGCATGTCAAATGGACGACTCATCATAGATTTCATAGGTACTTTCACACATATTTTTTTTTTTTCTTAAATAAATTCTTTTTGTATTAATGAAATAGTAAATAACAAAAAAAAAAAATACTACCAAGAACTCTAAAATAATCTATTTTATGAGGTCGTTAATAATTTTTAAGTTTGATACATTTCCGATTGAAAATTTCACTAGCTCATTCTCATTTTAATTGTAGCTGAGGCATATGGGTTGCCATTTTTACCGGCCTATAAGAATATCACCAAAATCCCAGATGCTATAAAAAAGGGAGTTAATTTCGCTTACGCCGGTTCAACTGCACTTGATGTCAAATATTTTAGTGGTATTAGTGGAGTCACTGCACCAAAGGAATCATTAAATGTGCAATTTGATTGGTTTAAGAAGCTAAAACCCGACTTATGTAAAAGCAAAGAAGGTTTTGTCCTAAATCCTTGCATGTTATTTTTGTGTGATATAATTGGTTTATCATCTATACGCCTAACAATACGTTTGTTTTGTTATGAGTTCACAGAATGTGACAGCTTCTTCAAAAACTCATTGTTTATAGTGGGAGAGATTGGTGGAAATGATATTTTTTATCATCTTTCTAAAACTATTACTGAACTACGAGAGATAGTTCCCTTGATGGTTGAATCAATCAAAAATACCACCAATGTATGTTATACAAATCTTAAGTAATTAAATGTTTACATATTAGCAAAAAATAAATAACTGTTGACTTCAATTGTAGAATAATTGTGTTTAAGTTATAGGTATTAGTGAATAAATAATGGTCTTGGAAAAATGTAATAGAGATTTATTTAATTATGTTTGTCAGGCTTTAATTGAAGAAGGAGCGGTAGAGCTAGTGGTTCCAGGGAACTTTCCAATGGGGTGTAATACTGACATATTGTCAAAAAAGATTAGTCAGAAGAAAGAAGACTATGACGAATTTGGATGTTTGACAGCTTACAACACTCTCATCGAATACTTTAATGAGCAGCTAAAAAAATCCATAGAGACAATAAAACAGAAACACCCTCAAGCTAAGATAGTATATTTTGACTATTACAACGATGCCAGACGTTTATATCAAGCACCACAACAGTATGGTGTGTGGAGCAATTATTTTCTTTCCTTGTTAAATTTTCATTGTTTTATTCTTGTCAAATTTGTTTGATCCCATTCACTAATTTATGTACATTAATGATGTAGGTTTTACTTCTGATAAGGTCGAGGTTTTGAAAGCATGTTGTGGAGGAATTGGACCATATCATCATGATCAGTATTGGTGTGGAACGCCAAATACAACAGTTTGCTCTGATCCTTCAAAACTAATAAATTGGGATGGACCACATTTTACCGAAGCCGCTTATAAGCAAATAGCTAAAGGTTTAATCGAAGGACCTTTTGCATATCCTTCTCTAAAACCTGCTCCTTTCAAGATAGCTTAG
Protein sequence

>MS.gene032026.t1

MKIFILFGITFACGFFGNFISNANPLPYEAIFNFGDSTSDTGNAAFDHLKEMEKLIPYGSTYFKHPSGRMSNGRLIIDFIAEAYGLPFLPAYKNITKIPDAIKKGVNFAYAGSTALDVKYFSGISGVTAPKESLNVQFDWFKKLKPDLCKSKEECDSFFKNSLFIVGEIGGNDIFYHLSKTITELREIVPLMVESIKNTTNALIEEGAVELVVPGNFPMGCNTDILSKKISQKKEDYDEFGCLTAYNTLIEYFNEQLKKSIETIKQKHPQAKIVYFDYYNDARRLYQAPQQYGFTSDKVEVLKACCGGIGPYHHDQYWCGTPNTTVCSDPSKLINWDGPHFTEAAYKQIAKGLIEGPFAYPSLKPAPFKIA