AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene032027

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032027.t1 MTR_3g069780 95.957 371 15 0 1 371 1 371 0.0 737
MS.gene032027.t1 MTR_3g438030 94.879 371 19 0 1 371 1 371 0.0 730
MS.gene032027.t1 MTR_3g069520 85.523 373 48 3 1 371 1 369 0.0 640
MS.gene032027.t1 MTR_3g448360 81.233 373 66 3 1 371 1 371 0.0 617
MS.gene032027.t1 MTR_2g079090 68.182 374 101 7 1 371 1 359 9.74e-179 500
MS.gene032027.t1 MTR_0029s0050 68.182 374 101 7 1 371 1 359 2.57e-177 497
MS.gene032027.t1 MTR_2g079080 67.380 374 104 7 1 371 1 359 2.73e-176 494
MS.gene032027.t1 MTR_3g463960 63.918 388 122 5 1 371 2 388 3.81e-176 495
MS.gene032027.t1 MTR_3g463950 63.918 388 122 5 1 371 2 388 3.81e-176 495
MS.gene032027.t1 MTR_3g463970 63.918 388 122 5 1 371 2 388 3.81e-176 495
MS.gene032027.t1 MTR_3g463940 63.918 388 122 5 1 371 2 388 3.81e-176 495
MS.gene032027.t1 MTR_0029s0100 67.647 374 103 7 1 371 1 359 5.01e-175 491
MS.gene032027.t1 MTR_3g463930 61.616 396 125 7 1 371 2 395 3.91e-167 473
MS.gene032027.t1 MTR_2g043980 59.200 375 129 7 1 371 7 361 1.26e-151 432
MS.gene032027.t1 MTR_2g015650 51.882 372 171 5 5 371 6 374 2.57e-128 373
MS.gene032027.t1 MTR_2g015670 49.584 361 162 7 15 371 16 360 1.65e-114 337
MS.gene032027.t1 MTR_2g015630 46.802 344 167 7 35 368 36 373 4.37e-101 304
MS.gene032027.t1 MTR_2g015580 45.058 344 177 4 28 364 45 383 4.62e-100 302
MS.gene032027.t1 MTR_2g043990 51.689 296 112 6 1 292 69 337 3.70e-95 287
MS.gene032027.t1 MTR_2g015590 43.567 342 180 7 28 361 29 365 4.50e-91 278
MS.gene032027.t1 MTR_3g466240 57.014 221 62 3 104 319 2 194 5.69e-76 233
MS.gene032027.t1 MTR_4g104240 38.329 347 187 12 27 361 36 367 9.90e-71 226
MS.gene032027.t1 MTR_2g015590 43.956 273 144 5 28 293 29 299 4.12e-67 216
MS.gene032027.t1 MTR_3g466190 67.470 166 35 3 58 223 7 153 2.04e-65 207
MS.gene032027.t1 MTR_3g466190 78.205 78 17 0 294 371 152 229 3.84e-37 134
MS.gene032027.t1 MTR_8g028160 33.687 377 216 15 6 361 11 374 4.03e-51 175
MS.gene032027.t1 MTR_7g087190 32.718 379 211 14 18 371 31 390 6.71e-51 175
MS.gene032027.t1 MTR_7g116870 33.889 360 202 13 28 369 31 372 5.92e-49 169
MS.gene032027.t1 MTR_1g030340 32.997 397 209 15 4 371 18 386 3.30e-47 165
MS.gene032027.t1 MTR_1g030220 33.613 357 202 11 28 364 38 379 7.09e-47 164
MS.gene032027.t1 MTR_7g111780 33.140 344 199 13 30 363 36 358 8.85e-47 163
MS.gene032027.t1 MTR_1g030268 34.358 358 196 14 28 364 38 377 9.40e-46 161
MS.gene032027.t1 MTR_7g113860 33.056 360 199 14 26 361 25 366 1.04e-45 161
MS.gene032027.t1 MTR_8g089805 32.033 359 206 12 28 363 38 381 3.31e-45 160
MS.gene032027.t1 MTR_7g113860 30.469 384 223 15 2 361 9 372 4.80e-45 159
MS.gene032027.t1 MTR_1g030230 33.696 368 201 14 20 363 22 370 6.67e-44 156
MS.gene032027.t1 MTR_7g033165 31.856 361 200 11 28 362 31 371 2.91e-43 154
MS.gene032027.t1 MTR_7g033155 32.383 386 194 15 22 363 30 392 7.71e-43 154
MS.gene032027.t1 MTR_7g033150 31.746 378 206 14 20 366 25 381 2.79e-42 152
MS.gene032027.t1 MTR_6g007090 32.394 355 214 11 20 361 29 370 8.24e-42 150
MS.gene032027.t1 MTR_1g030275 34.349 361 190 16 28 363 37 375 3.96e-40 146
MS.gene032027.t1 MTR_6g007095 31.088 386 230 13 1 367 7 375 3.29e-39 148
MS.gene032027.t1 MTR_6g007095 27.577 359 228 12 18 363 351 690 3.35e-28 116
MS.gene032027.t1 MTR_1g082390 31.092 357 207 15 20 354 21 360 1.34e-38 142
MS.gene032027.t1 MTR_8g038680 30.141 355 211 14 28 361 26 364 4.09e-37 138
MS.gene032027.t1 MTR_1g030268 33.692 279 159 10 28 293 38 303 3.48e-34 129
MS.gene032027.t1 MTR_7g111780 32.707 266 158 10 111 363 2 259 1.03e-33 126
MS.gene032027.t1 MTR_8g022810 31.395 344 183 17 29 350 40 352 5.76e-33 127
MS.gene032027.t1 MTR_3g052490 30.749 374 216 15 3 362 12 356 5.17e-31 121
MS.gene032027.t1 MTR_4g056280 29.360 344 216 10 19 354 20 344 1.10e-30 120
MS.gene032027.t1 MTR_4g056160 28.743 334 213 9 30 354 27 344 1.26e-30 120
MS.gene032027.t1 MTR_6g007100 30.899 356 200 15 28 367 31 356 2.15e-30 119
MS.gene032027.t1 MTR_8g031390 28.824 340 211 14 25 356 32 348 2.31e-30 119
MS.gene032027.t1 MTR_2g033930 30.357 336 205 11 30 356 32 347 3.05e-30 119
MS.gene032027.t1 MTR_1g030265 31.629 313 175 13 81 371 53 348 5.93e-30 118
MS.gene032027.t1 MTR_8g031430 28.989 376 224 17 4 363 14 362 1.21e-29 117
MS.gene032027.t1 MTR_8g031420 27.368 380 234 14 2 363 5 360 2.44e-29 116
MS.gene032027.t1 MTR_7g033165 32.090 268 154 7 28 279 31 286 3.01e-29 115
MS.gene032027.t1 MTR_1g025680 30.178 338 202 13 30 355 34 349 5.32e-29 117
MS.gene032027.t1 MTR_4g122200 29.076 368 212 14 20 369 27 363 2.07e-28 114
MS.gene032027.t1 MTR_1g025720 29.641 334 196 12 28 347 35 343 3.66e-28 113
MS.gene032027.t1 MTR_1g025780 28.614 339 204 14 30 355 41 354 1.28e-27 112
MS.gene032027.t1 MTR_3g005650 27.778 342 214 13 30 361 30 348 1.51e-27 111
MS.gene032027.t1 MTR_8g014910 28.022 364 223 14 3 354 11 347 1.61e-27 111
MS.gene032027.t1 MTR_7g113860 28.990 307 178 13 79 361 8 298 2.01e-27 110
MS.gene032027.t1 MTR_1g025700 30.205 341 197 13 30 355 50 364 2.17e-27 111
MS.gene032027.t1 MTR_3g098270 29.360 344 208 13 28 357 32 354 3.53e-27 111
MS.gene032027.t1 MTR_2g015080 29.429 333 200 15 34 349 42 356 1.93e-26 108
MS.gene032027.t1 MTR_8g089805 28.094 299 184 10 86 363 25 313 2.69e-26 107
MS.gene032027.t1 MTR_3g052480 30.058 346 205 14 30 360 33 356 3.59e-26 108
MS.gene032027.t1 MTR_3g052580 29.769 346 208 14 30 362 28 351 4.11e-26 108
MS.gene032027.t1 MTR_5g078210 27.273 341 204 12 34 358 29 341 5.47e-26 107
MS.gene032027.t1 MTR_3g052580 29.759 373 219 17 3 362 8 350 5.81e-26 108
MS.gene032027.t1 MTR_8g031400 28.613 346 205 14 25 356 32 349 6.00e-26 107
MS.gene032027.t1 MTR_2g100620 27.761 335 213 12 30 354 31 346 6.20e-26 107
MS.gene032027.t1 MTR_8g031390 29.333 300 185 13 25 320 32 308 1.60e-25 105
MS.gene032027.t1 MTR_2g033920 28.406 345 204 12 29 356 34 352 1.75e-25 106
MS.gene032027.t1 MTR_8g012540 29.909 331 189 15 28 334 26 337 2.70e-25 105
MS.gene032027.t1 MTR_1g025760 29.290 338 205 12 30 355 80 395 5.61e-25 105
MS.gene032027.t1 MTR_5g009100 27.859 341 210 14 32 359 48 365 7.79e-25 104
MS.gene032027.t1 MTR_8g079050 29.199 387 216 19 3 362 11 366 1.61e-24 103
MS.gene032027.t1 MTR_4g035353 25.000 356 235 11 18 361 19 354 2.25e-24 102
MS.gene032027.t1 MTR_4g087985 28.080 349 213 13 29 356 35 366 2.85e-24 102
MS.gene032027.t1 MTR_3g082830 27.596 337 220 11 30 359 38 357 2.98e-24 102
MS.gene032027.t1 MTR_5g022630 28.406 345 217 11 16 349 29 354 3.03e-24 102
MS.gene032027.t1 MTR_3g464730 28.415 366 228 16 1 355 2 344 8.51e-24 101
MS.gene032027.t1 MTR_5g084750 28.242 347 205 13 30 359 30 349 1.08e-23 100
MS.gene032027.t1 MTR_5g084770 29.429 350 204 14 21 354 21 343 1.82e-23 100
MS.gene032027.t1 MTR_8g087890 26.205 332 210 13 32 351 33 341 1.56e-22 97.8
MS.gene032027.t1 MTR_3g114090 29.651 344 204 16 26 355 32 351 1.64e-22 97.8
MS.gene032027.t1 MTR_3g435540 27.747 364 208 15 32 367 25 361 1.86e-22 97.4
MS.gene032027.t1 MTR_5g074270 27.485 342 204 14 28 351 31 346 2.55e-22 97.4
MS.gene032027.t1 MTR_5g078210 27.492 331 186 12 34 351 29 318 3.32e-22 96.3
MS.gene032027.t1 MTR_5g083040 26.225 347 220 14 30 360 32 358 4.00e-22 96.7
MS.gene032027.t1 MTR_7g116510 29.155 343 212 15 29 360 24 346 4.96e-22 96.3
MS.gene032027.t1 MTR_2g044100 27.066 351 220 15 23 359 36 364 5.19e-22 96.7
MS.gene032027.t1 MTR_5g022640 26.611 357 230 11 9 355 25 359 5.45e-22 96.3
MS.gene032027.t1 MTR_5g084790 27.893 337 219 11 30 359 32 351 7.44e-22 95.9
MS.gene032027.t1 MTR_1g025910 28.657 335 199 14 35 355 41 349 8.96e-22 95.9
MS.gene032027.t1 MTR_1g060490 26.269 335 201 12 27 349 34 334 1.01e-21 95.1
MS.gene032027.t1 MTR_1g024890 28.000 350 222 13 23 361 25 355 1.37e-21 95.1
MS.gene032027.t1 MTR_7g116520 26.934 349 215 15 29 361 33 357 2.61e-21 94.4
MS.gene032027.t1 MTR_4g108690 27.566 341 203 14 32 355 29 342 9.05e-21 92.8
MS.gene032027.t1 MTR_0565s0010 24.024 333 217 14 32 351 34 343 1.13e-20 92.4
MS.gene032027.t1 MTR_8g075200 26.720 378 231 15 1 355 2 356 1.27e-20 92.8
MS.gene032027.t1 MTR_1g060500 25.862 348 202 15 27 353 37 349 4.16e-20 90.9
MS.gene032027.t1 MTR_7g104220 26.567 335 201 14 31 353 43 344 8.97e-20 89.7
MS.gene032027.t1 MTR_1g079540 27.507 349 213 12 27 360 28 351 1.11e-19 89.7
MS.gene032027.t1 MTR_0009s0250 26.408 284 179 9 30 306 33 293 1.35e-19 89.4
MS.gene032027.t1 MTR_3g005660 26.364 330 216 13 32 351 38 350 2.17e-19 89.0
MS.gene032027.t1 MTR_5g093090 26.273 373 233 13 6 362 6 352 7.18e-19 87.4
MS.gene032027.t1 MTR_8g075220 24.802 379 242 13 1 355 1 360 7.66e-19 87.4
MS.gene032027.t1 MTR_3g114120 27.327 333 207 16 30 350 47 356 2.11e-18 85.9
MS.gene032027.t1 MTR_8g022790 25.948 343 214 12 25 356 32 345 2.23e-18 85.9
MS.gene032027.t1 MTR_2g084585 25.000 336 220 11 30 354 30 344 8.80e-18 84.0
MS.gene032027.t1 MTR_8g022810 33.014 209 107 10 29 221 40 231 3.09e-17 82.0
MS.gene032027.t1 MTR_4g019880 25.806 372 234 16 2 360 12 354 8.45e-17 81.3
MS.gene032027.t1 MTR_2g033920 26.978 278 174 9 29 293 34 295 8.65e-17 80.5
MS.gene032027.t1 MTR_1g079530 27.027 370 213 19 3 356 11 339 1.07e-15 77.8
MS.gene032027.t1 MTR_1g092750 23.780 328 211 11 31 349 41 338 2.37e-15 77.0
MS.gene032027.t1 MTR_3g024510 23.795 332 218 14 32 351 40 348 3.16e-15 76.6
MS.gene032027.t1 MTR_2g461580 23.615 343 214 12 30 359 31 338 3.26e-15 76.3
MS.gene032027.t1 MTR_3g023220 24.308 325 203 12 31 345 34 325 3.33e-15 76.3
MS.gene032027.t1 MTR_3g021460 23.099 342 211 12 30 356 31 335 1.37e-14 74.7
MS.gene032027.t1 MTR_1g092740 23.547 344 203 13 31 353 39 343 1.60e-14 74.3
MS.gene032027.t1 MTR_8g074570 24.425 348 211 13 31 356 39 356 7.86e-14 72.4
MS.gene032027.t1 MTR_5g093090 25.490 306 193 10 6 295 6 292 4.96e-12 66.6
MS.gene032027.t1 MTR_2g017875 26.284 331 193 17 31 344 35 331 1.83e-11 65.1
MS.gene032027.t1 MTR_8g087870 25.723 346 209 16 31 361 30 342 3.36e-11 64.3
MS.gene032027.t1 MTR_2g017965 24.716 352 211 18 31 361 34 352 3.52e-11 64.3
MS.gene032027.t1 MTR_1g092690 22.353 340 216 13 21 349 45 347 5.21e-11 63.9
MS.gene032027.t1 MTR_6g049220 38.462 104 57 5 19 118 20 120 9.89e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032027.t1 AT5G45910 44.327 379 185 9 1 362 1 370 2.30e-104 312
MS.gene032027.t1 AT1G28610 42.857 343 180 9 29 362 30 365 2.44e-87 269
MS.gene032027.t1 AT1G31550 40.379 369 203 11 3 361 8 369 2.86e-85 264
MS.gene032027.t1 AT1G28570 42.274 343 183 9 28 361 32 368 6.48e-83 258
MS.gene032027.t1 AT1G28670 40.805 348 186 10 28 363 33 372 8.12e-82 255
MS.gene032027.t1 AT1G28580 40.525 343 189 9 28 361 35 371 8.69e-82 255
MS.gene032027.t1 AT1G31550 39.837 369 202 12 3 361 8 366 1.32e-81 254
MS.gene032027.t1 AT1G28660 41.379 348 183 11 28 363 33 371 3.31e-81 253
MS.gene032027.t1 AT1G28640 40.058 347 189 9 28 363 33 371 3.82e-81 253
MS.gene032027.t1 AT1G28600 40.000 360 193 9 15 361 15 364 3.89e-81 253
MS.gene032027.t1 AT1G28590 40.173 346 192 9 28 364 34 373 5.98e-81 253
MS.gene032027.t1 AT2G27360 41.279 344 186 9 28 361 31 368 1.14e-80 252
MS.gene032027.t1 AT1G28660 41.379 348 182 12 28 363 33 370 2.34e-80 251
MS.gene032027.t1 AT1G28650 40.058 347 189 9 28 363 35 373 7.69e-79 247
MS.gene032027.t1 AT3G48460 37.429 350 188 11 27 361 35 368 3.19e-64 209
MS.gene032027.t1 AT1G28580 38.356 292 168 7 76 361 5 290 3.75e-63 204
MS.gene032027.t1 AT4G01130 32.865 356 202 12 28 361 32 372 5.20e-49 169
MS.gene032027.t1 AT1G28570 41.038 212 118 4 154 361 88 296 7.83e-49 167
MS.gene032027.t1 AT5G03980 33.721 344 176 9 15 353 14 310 2.09e-48 166
MS.gene032027.t1 AT1G28570 41.346 208 115 4 158 361 1 205 2.79e-48 163
MS.gene032027.t1 AT1G54790 32.597 362 198 14 26 361 28 369 1.30e-47 166
MS.gene032027.t1 AT1G56670 32.022 356 197 14 30 368 40 367 2.44e-45 160
MS.gene032027.t1 AT5G14450 31.793 368 206 14 28 371 39 385 2.81e-45 160
MS.gene032027.t1 AT1G67830 32.410 361 200 14 21 353 21 365 1.38e-44 157
MS.gene032027.t1 AT3G05180 33.148 359 192 16 28 359 34 371 1.09e-43 155
MS.gene032027.t1 AT3G62280 31.250 352 212 11 18 361 28 357 1.39e-43 155
MS.gene032027.t1 AT1G54790 30.978 368 208 14 20 361 21 368 3.91e-43 154
MS.gene032027.t1 AT1G09390 31.161 353 204 13 30 368 37 364 1.42e-41 150
MS.gene032027.t1 AT1G54790 29.487 390 211 15 20 361 21 394 4.73e-40 146
MS.gene032027.t1 AT3G26430 30.790 367 213 13 28 371 29 377 5.43e-39 143
MS.gene032027.t1 AT1G28600 39.801 201 103 6 15 204 15 208 1.83e-35 129
MS.gene032027.t1 AT4G01130 32.734 278 164 8 28 293 32 298 2.46e-34 129
MS.gene032027.t1 AT1G28610 42.222 180 87 7 29 198 30 202 3.92e-34 127
MS.gene032027.t1 AT1G71120 29.532 342 196 13 30 356 31 342 2.93e-31 122
MS.gene032027.t1 AT3G27950 28.836 378 222 13 9 363 11 364 4.20e-30 119
MS.gene032027.t1 AT1G56670 30.824 279 157 10 30 293 40 297 7.94e-30 116
MS.gene032027.t1 AT4G10950 27.566 341 218 12 26 356 66 387 1.45e-29 118
MS.gene032027.t1 AT5G45950 29.730 333 202 12 30 354 40 348 4.84e-29 115
MS.gene032027.t1 AT2G40250 28.291 357 213 14 21 358 26 358 6.65e-29 115
MS.gene032027.t1 AT1G75920 28.962 366 214 12 1 355 6 336 1.25e-28 114
MS.gene032027.t1 AT1G23500 26.184 359 230 12 5 356 9 339 1.51e-28 114
MS.gene032027.t1 AT1G73610 27.545 334 205 12 29 355 34 337 1.12e-27 112
MS.gene032027.t1 AT4G01130 28.523 298 179 11 86 361 1 286 3.27e-27 109
MS.gene032027.t1 AT1G71250 26.686 341 224 11 30 361 41 364 3.43e-27 111
MS.gene032027.t1 AT1G06990 27.841 352 219 12 20 358 27 356 3.70e-27 110
MS.gene032027.t1 AT1G20120 27.586 348 211 12 28 358 76 399 4.28e-27 111
MS.gene032027.t1 AT4G10950 27.273 341 215 13 26 356 66 383 5.68e-27 110
MS.gene032027.t1 AT1G75880 28.443 334 214 13 30 355 52 368 8.78e-27 110
MS.gene032027.t1 AT1G53920 29.609 358 208 17 30 370 48 378 1.15e-26 109
MS.gene032027.t1 AT2G03980 29.179 329 199 12 28 345 41 346 9.06e-26 107
MS.gene032027.t1 AT2G03980 29.179 329 199 12 28 345 41 346 9.06e-26 107
MS.gene032027.t1 AT2G03980 29.179 329 199 12 28 345 41 346 9.06e-26 107
MS.gene032027.t1 AT2G03980 29.179 329 199 12 28 345 41 346 9.06e-26 107
MS.gene032027.t1 AT5G63170 27.607 326 196 12 30 346 28 322 9.85e-26 106
MS.gene032027.t1 AT3G62280 29.391 279 173 8 21 293 31 291 1.22e-25 105
MS.gene032027.t1 AT5G08460 27.711 332 204 12 28 344 47 357 1.99e-25 106
MS.gene032027.t1 AT1G20135 27.410 332 199 13 28 349 27 326 2.88e-25 105
MS.gene032027.t1 AT2G23540 28.684 380 221 15 1 356 18 371 4.15e-25 105
MS.gene032027.t1 AT1G75890 28.657 335 212 14 30 355 47 363 5.16e-25 104
MS.gene032027.t1 AT1G75880 29.464 336 207 15 30 355 52 367 5.23e-25 105
MS.gene032027.t1 AT1G75920 28.084 381 213 13 1 355 1 346 5.58e-25 104
MS.gene032027.t1 AT2G42990 28.182 330 209 12 30 350 28 338 7.50e-25 104
MS.gene032027.t1 AT5G15720 27.083 336 207 13 30 350 30 342 1.13e-24 103
MS.gene032027.t1 AT5G40990 29.459 370 223 16 4 357 11 358 1.16e-24 103
MS.gene032027.t1 AT1G75890 28.657 335 212 14 30 355 76 392 1.48e-24 103
MS.gene032027.t1 AT1G75910 26.039 361 224 13 9 355 5 336 1.96e-24 102
MS.gene032027.t1 AT1G75930 29.915 351 186 16 28 353 27 342 2.30e-24 102
MS.gene032027.t1 AT3G14225 28.530 347 208 15 30 357 37 362 2.65e-24 103
MS.gene032027.t1 AT1G75920 29.355 310 179 11 57 355 28 308 3.25e-24 101
MS.gene032027.t1 AT1G20132 27.353 340 209 14 30 355 61 376 7.43e-24 102
MS.gene032027.t1 AT1G53940 30.904 343 203 14 29 357 38 360 1.24e-23 101
MS.gene032027.t1 AT3G16370 27.195 353 220 13 20 359 22 350 1.36e-23 100
MS.gene032027.t1 AT3G14225 28.242 347 205 15 30 357 37 358 2.16e-23 100
MS.gene032027.t1 AT5G45960 26.269 335 219 11 30 353 47 364 4.93e-23 99.4
MS.gene032027.t1 AT3G04290 28.529 340 217 10 29 360 28 349 7.52e-23 99.0
MS.gene032027.t1 AT2G04570 26.087 345 217 12 30 360 28 348 8.79e-23 98.2
MS.gene032027.t1 AT1G59406 27.473 364 233 14 1 355 1 342 1.18e-22 97.8
MS.gene032027.t1 AT1G59030 27.473 364 233 14 1 355 1 342 1.18e-22 97.8
MS.gene032027.t1 AT1G58725 27.473 364 233 14 1 355 1 342 1.18e-22 97.8
MS.gene032027.t1 AT1G75890 28.035 346 213 15 30 355 47 376 1.67e-22 97.8
MS.gene032027.t1 AT5G42170 27.761 335 209 12 30 354 50 361 2.05e-22 97.4
MS.gene032027.t1 AT5G33370 26.801 347 214 14 29 360 29 350 3.16e-22 97.1
MS.gene032027.t1 AT3G09930 26.844 339 211 11 21 349 30 341 3.43e-22 96.7
MS.gene032027.t1 AT3G09930 26.844 339 211 11 21 349 30 341 3.43e-22 96.7
MS.gene032027.t1 AT1G29670 26.220 328 214 11 32 351 34 341 3.46e-22 97.1
MS.gene032027.t1 AT4G26790 26.409 337 220 11 28 355 27 344 7.08e-22 95.9
MS.gene032027.t1 AT4G26790 26.409 337 220 11 28 355 27 344 7.08e-22 95.9
MS.gene032027.t1 AT2G30310 28.691 359 224 17 5 350 7 346 1.09e-21 95.5
MS.gene032027.t1 AT5G03820 26.005 373 230 17 1 354 4 349 1.26e-21 95.1
MS.gene032027.t1 AT1G29670 26.524 328 213 11 32 351 102 409 1.36e-21 95.9
MS.gene032027.t1 AT5G03820 26.005 373 230 17 1 354 32 377 2.80e-21 94.7
MS.gene032027.t1 AT3G50400 27.979 386 220 16 1 356 1 358 3.46e-21 94.4
MS.gene032027.t1 AT4G28780 27.697 343 216 15 29 360 30 351 3.90e-21 94.0
MS.gene032027.t1 AT5G22810 27.473 364 234 15 1 354 8 351 4.69e-21 93.6
MS.gene032027.t1 AT2G19010 28.863 343 196 17 32 361 32 339 1.19e-20 92.4
MS.gene032027.t1 AT1G54000 26.765 340 202 14 27 353 33 338 1.19e-20 92.8
MS.gene032027.t1 AT2G31540 28.249 354 224 15 18 358 22 358 1.27e-20 92.4
MS.gene032027.t1 AT2G19010 28.125 384 218 19 1 361 21 369 1.52e-20 92.4
MS.gene032027.t1 AT5G37690 25.223 337 206 13 34 353 31 338 2.33e-20 91.7
MS.gene032027.t1 AT1G29660 26.426 333 208 17 32 351 34 342 3.90e-20 90.9
MS.gene032027.t1 AT1G74460 26.269 335 215 10 32 355 25 338 5.01e-20 90.9
MS.gene032027.t1 AT5G18430 25.575 348 219 13 29 360 27 350 7.41e-20 90.1
MS.gene032027.t1 AT1G54020 25.843 356 217 16 6 350 8 327 9.79e-20 90.1
MS.gene032027.t1 AT1G53990 26.146 371 233 15 1 357 6 349 1.03e-19 89.7
MS.gene032027.t1 AT1G58520 27.647 340 198 13 30 355 30 335 1.12e-19 89.4
MS.gene032027.t1 AT1G58525 27.647 340 198 13 30 355 30 335 1.12e-19 89.4
MS.gene032027.t1 AT5G03610 24.269 342 219 10 25 355 38 350 1.27e-19 89.4
MS.gene032027.t1 AT5G15720 25.806 279 176 9 30 293 30 292 1.47e-19 88.6
MS.gene032027.t1 AT1G75900 27.027 333 216 13 30 354 43 356 1.84e-19 89.0
MS.gene032027.t1 AT1G54010 27.027 333 196 15 26 345 32 330 1.87e-19 89.4
MS.gene032027.t1 AT1G20130 25.948 343 217 12 30 355 204 526 3.27e-19 89.4
MS.gene032027.t1 AT1G20130 25.948 343 217 12 30 355 184 506 5.88e-19 88.6
MS.gene032027.t1 AT5G41890 25.815 368 231 12 11 356 12 359 2.33e-18 85.9
MS.gene032027.t1 AT3G53100 24.405 336 222 12 30 354 29 343 2.97e-18 85.5
MS.gene032027.t1 AT1G33811 25.073 343 229 13 31 361 35 361 3.52e-18 85.5
MS.gene032027.t1 AT2G19060 27.378 347 198 17 32 359 32 343 6.62e-18 84.3
MS.gene032027.t1 AT1G75920 26.575 365 193 13 1 355 6 305 7.48e-18 83.6
MS.gene032027.t1 AT2G30220 27.095 358 230 15 5 350 7 345 8.05e-18 84.3
MS.gene032027.t1 AT2G24560 26.197 355 233 15 21 364 24 360 1.04e-17 84.0
MS.gene032027.t1 AT3G14820 26.786 336 210 12 30 354 32 342 2.43e-17 82.8
MS.gene032027.t1 AT5G55050 27.920 351 212 15 30 362 39 366 6.06e-17 82.0
MS.gene032027.t1 AT3G14210 26.023 342 206 16 26 353 32 340 2.51e-16 80.1
MS.gene032027.t1 AT1G53940 31.273 275 164 11 29 293 38 297 2.70e-16 79.0
MS.gene032027.t1 AT5G03600 23.867 331 216 10 24 349 8 307 3.23e-16 79.0
MS.gene032027.t1 AT5G03600 23.513 353 227 11 9 349 21 342 3.54e-16 79.3
MS.gene032027.t1 AT2G19050 24.412 340 215 11 32 359 33 342 7.31e-16 78.6
MS.gene032027.t1 AT5G37690 24.478 335 203 14 34 353 31 330 1.87e-15 77.0
MS.gene032027.t1 AT2G36325 25.076 331 214 11 31 354 48 351 3.77e-15 76.3
MS.gene032027.t1 AT5G45670 23.653 334 217 14 32 351 31 340 1.20e-14 74.7
MS.gene032027.t1 AT3G14220 22.192 365 233 14 9 356 7 337 1.01e-13 72.0
MS.gene032027.t1 AT5G33370 25.357 280 176 11 29 293 29 290 6.79e-13 69.3
MS.gene032027.t1 AT2G24560 27.431 288 181 13 21 294 24 297 1.20e-12 68.6
MS.gene032027.t1 AT2G31550 28.019 207 128 8 161 358 23 217 1.50e-12 67.0
MS.gene032027.t1 AT3G43550 27.076 277 169 10 30 293 30 286 1.72e-12 67.8
MS.gene032027.t1 AT2G04020 28.972 214 133 10 28 232 41 244 4.74e-12 66.2
MS.gene032027.t1 AT4G16230 26.496 234 148 8 1 221 3 225 1.24e-11 64.7
MS.gene032027.t1 AT2G04020 29.524 210 129 10 28 228 41 240 1.42e-11 65.5

Find 62 sgRNAs with CRISPR-Local

Find 104 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCTTCAAAACTAATAAAT+TGG 0.141859 3.4:-69675780 MS.gene032027:CDS
AAAGAAGACTATGACGAATT+TGG 0.244838 3.4:-69676169 MS.gene032027:CDS
TCAGAGCAAACTGTTGTATT+TGG 0.251645 3.4:+69675802 None:intergenic
GTGATCAAATGCAGCATTTC+CGG 0.268623 3.4:+69677203 None:intergenic
CATTAAATGTGCAATTTGAT+TGG 0.321915 3.4:-69676730 MS.gene032027:CDS
ATGAAGATCTTCATTCTGTT+TGG 0.357199 3.4:-69677324 MS.gene032027:CDS
AAAGCATGTTGTGGAGGAAT+TGG 0.363705 3.4:-69675859 MS.gene032027:CDS
TGCACATTTAATGATTCCTT+TGG 0.373985 3.4:+69676740 None:intergenic
AGAGTCGCCGAAGTTGAATA+TGG 0.388284 3.4:+69677236 None:intergenic
ACGAGAGATAGTTCCCTTGA+TGG 0.390493 3.4:-69676477 MS.gene032027:CDS
GCGGTAGAGCTAGTGGTTCC+AGG 0.394718 3.4:-69676247 MS.gene032027:CDS
TTAATTGTAGCTGAGGCATA+TGG 0.396651 3.4:-69676896 MS.gene032027:intron
GACATCAAGTGCAGTTGAAC+CGG 0.404703 3.4:+69676796 None:intergenic
CAATACTGATCATGATGATA+TGG 0.409129 3.4:+69675835 None:intergenic
TATTTGCTTATAAGCGGCTT+CGG 0.415948 3.4:+69675741 None:intergenic
AAACAGAATGAAGATCTTCA+TGG 0.420108 3.4:+69677326 None:intergenic
TTGAAGTATGTTGAACCATA+AGG 0.422999 3.4:+69677156 None:intergenic
TCCTTCAAAACTAATAAATT+GGG 0.433608 3.4:-69675779 MS.gene032027:CDS
CGACTCATCATAGATTTCAT+AGG 0.433635 3.4:-69677105 MS.gene032027:intron
ATTTGATCACCTCAAAGAAA+TGG 0.440475 3.4:-69677190 MS.gene032027:CDS
TTGTTTATAGTGGGAGAGAT+TGG 0.442235 3.4:-69676545 MS.gene032027:CDS
TTTGATTGATTCAACCATCA+AGG 0.454594 3.4:+69676463 None:intergenic
CCATCAGGACGCATGTCAAA+TGG 0.466839 3.4:-69677129 MS.gene032027:CDS
TATCAAGCACCACAACAGTA+TGG 0.472277 3.4:-69676013 MS.gene032027:intron
TGTCAGGCTTTAATTGAAGA+AGG 0.476299 3.4:-69676271 MS.gene032027:intron
TAAGCTATCTTGAAAGGAGC+AGG 0.481547 3.4:+69675673 None:intergenic
CATATCATCATGATCAGTAT+TGG 0.482301 3.4:-69675834 MS.gene032027:CDS
TTTAGAGAAGGATATGCAAA+AGG 0.485906 3.4:+69675697 None:intergenic
AATATACTATCTTAGCTTGA+GGG 0.487430 3.4:+69676065 None:intergenic
CACCCCATTGGAAAGTTCCC+TGG 0.497541 3.4:+69676229 None:intergenic
GACTTATGTAAAAGCAAAGA+AGG 0.499168 3.4:-69676689 MS.gene032027:intron
GCTTATAAGCAAATAGCTAA+AGG 0.500430 3.4:-69675733 MS.gene032027:CDS
GGAGTTAATTTCGCTTATGC+CGG 0.502383 3.4:-69676815 MS.gene032027:CDS
GTTCCAGGGAACTTTCCAAT+GGG 0.514992 3.4:-69676232 MS.gene032027:CDS
TTTATAGTGGGAGAGATTGG+TGG 0.518109 3.4:-69676542 MS.gene032027:CDS
TAATTGTAGCTGAGGCATAT+GGG 0.522458 3.4:-69676895 MS.gene032027:intron
CAACTCTAAGCTATCTTGAA+AGG 0.524346 3.4:+69675667 None:intergenic
TTTAGCTATTTGCTTATAAG+CGG 0.529705 3.4:+69675735 None:intergenic
TTGATTGATTCAACCATCAA+GGG 0.530384 3.4:+69676464 None:intergenic
TGGTGCTTGATATAAACGTC+TGG 0.541930 3.4:+69676024 None:intergenic
CCATTTGACATGCGTCCTGA+TGG 0.543757 3.4:+69677129 None:intergenic
ACATACTTCAAACATCCATC+AGG 0.546171 3.4:-69677144 MS.gene032027:CDS
AATATGGCTTCATACGGTAG+AGG 0.557506 3.4:+69677252 None:intergenic
TTTGGTATCACCTTTGCATG+TGG 0.561909 3.4:-69677306 MS.gene032027:CDS
GGTTCCAGGGAACTTTCCAA+TGG 0.563863 3.4:-69676233 MS.gene032027:CDS
TTGGTGATATTCTTATAGGC+CGG 0.575246 3.4:+69676860 None:intergenic
CGGTAGAGCTAGTGGTTCCA+GGG 0.577023 3.4:-69676246 MS.gene032027:CDS
ATAGCTAAAGGTTTAATCGA+AGG 0.579347 3.4:-69675721 MS.gene032027:CDS
TCAAAACTAATAAATTGGGA+TGG 0.581957 3.4:-69675775 MS.gene032027:CDS
GGCGACTCTACAAGTGATAC+CGG 0.582604 3.4:-69677222 MS.gene032027:CDS
AGAAGGAGCGGTAGAGCTAG+TGG 0.586129 3.4:-69676254 MS.gene032027:CDS
AAATATACTATCTTAGCTTG+AGG 0.588022 3.4:+69676064 None:intergenic
ATTTGTATAACATACATTGG+TGG 0.593190 3.4:+69676436 None:intergenic
GGCTTTAATTGAAGAAGGAG+CGG 0.599772 3.4:-69676266 MS.gene032027:CDS
TAGTGGAGTCACTGCACCAA+AGG 0.599833 3.4:-69676756 MS.gene032027:CDS
CATCATGATCAGTATTGGTG+TGG 0.600970 3.4:-69675829 MS.gene032027:CDS
ATGTCAGTATTACACCCCAT+TGG 0.600994 3.4:+69676217 None:intergenic
AAGTTGAATATGGCTTCATA+CGG 0.609111 3.4:+69677246 None:intergenic
CTCCACACACCATACTGTTG+TGG 0.629875 3.4:+69676004 None:intergenic
TATGAAGCCATATTCAACTT+CGG 0.634458 3.4:-69677243 MS.gene032027:CDS
TTCCAGGGAACTTTCCAATG+GGG 0.642288 3.4:-69676231 MS.gene032027:CDS
TAAGCGGCTTCGGTAAAATG+TGG 0.667134 3.4:+69675751 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACAATGAAAATTTAACA+AGG + chr3.4:69677032-69677051 None:intergenic 15.0%
!! TTTATTTAATTATGTTTGTC+AGG - chr3.4:69676709-69676728 MS.gene032027:CDS 15.0%
!!! AATAATTGTGTTTAAGTTAT+AGG - chr3.4:69676644-69676663 MS.gene032027:intron 15.0%
!!! CTAAAATAATCTATTTTATG+AGG - chr3.4:69676003-69676022 MS.gene032027:intron 15.0%
!!! TTATTTTTCTGTGATATAAT+TGG - chr3.4:69676352-69676371 MS.gene032027:intron 15.0%
!! AAAAACTCATTGTTTATAGT+GGG - chr3.4:69676442-69676461 MS.gene032027:intron 20.0%
!! AAGATTTGTATAACATACAT+TGG + chr3.4:69676566-69676585 None:intergenic 20.0%
!! AATGTACATAAATTAGTGAA+TGG + chr3.4:69677078-69677097 None:intergenic 20.0%
!! AGGTATTAGTGAATAAATAA+TGG - chr3.4:69676664-69676683 MS.gene032027:intron 20.0%
!! ATCCTTCAAAACTAATAAAT+TGG - chr3.4:69677216-69677235 MS.gene032027:CDS 20.0%
!! ATGGAAAAATTAATTCCTTA+TGG - chr3.4:69675825-69675844 MS.gene032027:CDS 20.0%
!! ATGTACATAAATTAGTGAAT+GGG + chr3.4:69677077-69677096 None:intergenic 20.0%
!! TCCTTCAAAACTAATAAATT+GGG - chr3.4:69677217-69677236 MS.gene032027:CDS 20.0%
!! TTTATGTACATTAATGATGT+AGG - chr3.4:69677086-69677105 MS.gene032027:intron 20.0%
!!! AAATATTTTAGTGGTATTAG+TGG - chr3.4:69676223-69676242 MS.gene032027:CDS 20.0%
!!! AACAAAACAAAAGTATTGTT+AGG + chr3.4:69676393-69676412 None:intergenic 20.0%
!!! ATAGATTATTTTAGAGTTCT+TGG + chr3.4:69675997-69676016 None:intergenic 20.0%
!!! TTAATTTTTCCATTTCTTTG+AGG + chr3.4:69675818-69675837 None:intergenic 20.0%
! AAAATAACATGCAAGGATTT+AGG + chr3.4:69676339-69676358 None:intergenic 25.0%
! ATTTGTATAACATACATTGG+TGG + chr3.4:69676563-69676582 None:intergenic 25.0%
! CAAAAACTCATTGTTTATAG+TGG - chr3.4:69676441-69676460 MS.gene032027:intron 25.0%
! CATTAAATGTGCAATTTGAT+TGG - chr3.4:69676266-69676285 MS.gene032027:CDS 25.0%
! TAGTGAATAAATAATGGTCT+TGG - chr3.4:69676670-69676689 MS.gene032027:intron 25.0%
! TCAAAACTAATAAATTGGGA+TGG - chr3.4:69677221-69677240 MS.gene032027:CDS 25.0%
! TTTAGCTATTTGCTTATAAG+CGG + chr3.4:69677264-69677283 None:intergenic 25.0%
!! AAATATACTATCTTAGCTTG+AGG + chr3.4:69676935-69676954 None:intergenic 25.0%
!! AATATACTATCTTAGCTTGA+GGG + chr3.4:69676934-69676953 None:intergenic 25.0%
!!! CTTGATGTCAAATATTTTAG+TGG - chr3.4:69676214-69676233 MS.gene032027:CDS 25.0%
!!! GATTTTGGTGATATTCTTAT+AGG + chr3.4:69676143-69676162 None:intergenic 25.0%
!!! TCCCAATTTATTAGTTTTGA+AGG + chr3.4:69677221-69677240 None:intergenic 25.0%
!!! TTCTTTGCTTTTACATAAGT+CGG + chr3.4:69676308-69676327 None:intergenic 25.0%
!!! TTTCTGTTTTATTGTCTCTA+TGG + chr3.4:69676909-69676928 None:intergenic 25.0%
AAAGAAGACTATGACGAATT+TGG - chr3.4:69676827-69676846 MS.gene032027:CDS 30.0%
AAGTTGAATATGGCTTCATA+CGG + chr3.4:69675753-69675772 None:intergenic 30.0%
ATAGCTAAAGGTTTAATCGA+AGG - chr3.4:69677275-69677294 MS.gene032027:CDS 30.0%
ATGAAGATCTTCATTCTGTT+TGG - chr3.4:69675672-69675691 MS.gene032027:CDS 30.0%
ATTTGATCACCTCAAAGAAA+TGG - chr3.4:69675806-69675825 MS.gene032027:CDS 30.0%
CAATACTGATCATGATGATA+TGG + chr3.4:69677164-69677183 None:intergenic 30.0%
CATATCATCATGATCAGTAT+TGG - chr3.4:69677162-69677181 MS.gene032027:CDS 30.0%
GACTTATGTAAAAGCAAAGA+AGG - chr3.4:69676307-69676326 MS.gene032027:intron 30.0%
GCTTATAAGCAAATAGCTAA+AGG - chr3.4:69677263-69677282 MS.gene032027:CDS 30.0%
TATGAAGCCATATTCAACTT+CGG - chr3.4:69675753-69675772 MS.gene032027:CDS 30.0%
TCACAGAAAAATAACATGCA+AGG + chr3.4:69676346-69676365 None:intergenic 30.0%
TGCACATTTAATGATTCCTT+TGG + chr3.4:69676259-69676278 None:intergenic 30.0%
TTGAAGTATGTTGAACCATA+AGG + chr3.4:69675843-69675862 None:intergenic 30.0%
TTTAGAGAAGGATATGCAAA+AGG + chr3.4:69677302-69677321 None:intergenic 30.0%
! GAGCTAGTGAAATTTTCAAT+CGG + chr3.4:69676071-69676090 None:intergenic 30.0%
! TGTAGGTTTTACTTCTGATA+AGG - chr3.4:69677103-69677122 MS.gene032027:intron 30.0%
! TTGATTGATTCAACCATCAA+GGG + chr3.4:69676535-69676554 None:intergenic 30.0%
! TTTGATTGATTCAACCATCA+AGG + chr3.4:69676536-69676555 None:intergenic 30.0%
!! TCTTTGCTTTTACATAAGTC+GGG + chr3.4:69676307-69676326 None:intergenic 30.0%
!!! TCTCATTTTAATTGTAGCTG+AGG - chr3.4:69676093-69676112 MS.gene032027:CDS 30.0%
AATCCCAGATGCTGTAAAAA+AGG - chr3.4:69676159-69676178 MS.gene032027:CDS 35.0%
ACATACTTCAAACATCCATC+AGG - chr3.4:69675852-69675871 MS.gene032027:CDS 35.0%
ATCCCAGATGCTGTAAAAAA+GGG - chr3.4:69676160-69676179 MS.gene032027:CDS 35.0%
CGACTCATCATAGATTTCAT+AGG - chr3.4:69675891-69675910 MS.gene032027:CDS 35.0%
TAATTGTAGCTGAGGCATAT+GGG - chr3.4:69676101-69676120 MS.gene032027:CDS 35.0%
TATTTGCTTATAAGCGGCTT+CGG + chr3.4:69677258-69677277 None:intergenic 35.0%
TCAGAGCAAACTGTTGTATT+TGG + chr3.4:69677197-69677216 None:intergenic 35.0%
TTAATTGTAGCTGAGGCATA+TGG - chr3.4:69676100-69676119 MS.gene032027:CDS 35.0%
TTCTTATAGGCCGGTAAAAA+TGG + chr3.4:69676130-69676149 None:intergenic 35.0%
! TGTCAGGCTTTAATTGAAGA+AGG - chr3.4:69676725-69676744 MS.gene032027:CDS 35.0%
! TTGGTGATATTCTTATAGGC+CGG + chr3.4:69676139-69676158 None:intergenic 35.0%
! TTGTTTATAGTGGGAGAGAT+TGG - chr3.4:69676451-69676470 MS.gene032027:CDS 35.0%
! TTTTACTTCTGATAAGGTCG+AGG - chr3.4:69677109-69677128 MS.gene032027:CDS 35.0%
!! TTTTACAGCATCTGGGATTT+TGG + chr3.4:69676158-69676177 None:intergenic 35.0%
!!! ATATGGGTTGCCATTTTTAC+CGG - chr3.4:69676117-69676136 MS.gene032027:CDS 35.0%
AAAGCATGTTGTGGAGGAAT+TGG - chr3.4:69677137-69677156 MS.gene032027:CDS 40.0%
AATATGGCTTCATACGGTAG+AGG + chr3.4:69675747-69675766 None:intergenic 40.0%
ATGTCAGTATTACACCCCAT+TGG + chr3.4:69676782-69676801 None:intergenic 40.0%
GGAGTTAATTTCGCTTATGC+CGG - chr3.4:69676181-69676200 MS.gene032027:CDS 40.0%
GTGATCAAATGCAGCATTTC+CGG + chr3.4:69675796-69675815 None:intergenic 40.0%
TAAGCTATCTTGAAAGGAGC+AGG + chr3.4:69677326-69677345 None:intergenic 40.0%
TATCAAGCACCACAACAGTA+TGG - chr3.4:69676983-69677002 MS.gene032027:intron 40.0%
TCCAAAAAAGCCACATGCAA+AGG + chr3.4:69675703-69675722 None:intergenic 40.0%
TGGTGCTTGATATAAACGTC+TGG + chr3.4:69676975-69676994 None:intergenic 40.0%
TTTGGTATCACCTTTGCATG+TGG - chr3.4:69675690-69675709 MS.gene032027:CDS 40.0%
! GGCTTTAATTGAAGAAGGAG+CGG - chr3.4:69676730-69676749 MS.gene032027:CDS 40.0%
! TTTATAGTGGGAGAGATTGG+TGG - chr3.4:69676454-69676473 MS.gene032027:CDS 40.0%
!! CATCATGATCAGTATTGGTG+TGG - chr3.4:69677167-69677186 MS.gene032027:CDS 40.0%
!!! AAAGGAGCAGGTTTTAGAGA+AGG + chr3.4:69677314-69677333 None:intergenic 40.0%
!!! ACCTTTGCATGTGGCTTTTT+TGG - chr3.4:69675699-69675718 MS.gene032027:CDS 40.0%
!!! ACTCCCTTTTTTACAGCATC+TGG + chr3.4:69676166-69676185 None:intergenic 40.0%
!!! CTCCCTTTTTTACAGCATCT+GGG + chr3.4:69676165-69676184 None:intergenic 40.0%
!!! GAGGTTTTGAAAGCATGTTG+TGG - chr3.4:69677128-69677147 MS.gene032027:CDS 40.0%
!!! GTTTTGAAAGCATGTTGTGG+AGG - chr3.4:69677131-69677150 MS.gene032027:CDS 40.0%
ACGAGAGATAGTTCCCTTGA+TGG - chr3.4:69676519-69676538 MS.gene032027:CDS 45.0%
AGAGTCGCCGAAGTTGAATA+TGG + chr3.4:69675763-69675782 None:intergenic 45.0%
GACATCAAGTGCAGTTGAAC+CGG + chr3.4:69676203-69676222 None:intergenic 45.0%
GTTCCAGGGAACTTTCCAAT+GGG - chr3.4:69676764-69676783 MS.gene032027:CDS 45.0%
TAAGCGGCTTCGGTAAAATG+TGG + chr3.4:69677248-69677267 None:intergenic 45.0%
TTCCAGGGAACTTTCCAATG+GGG - chr3.4:69676765-69676784 MS.gene032027:CDS 45.0%
!!! ATTAAAATCAATAATTTTTA+AGG - chr3.4:69676034-69676053 MS.gene032027:CDS 5.0%
CACCACAACAGTATGGTGTG+TGG - chr3.4:69676990-69677009 MS.gene032027:intron 50.0%
CCATCAGGACGCATGTCAAA+TGG - chr3.4:69675867-69675886 MS.gene032027:CDS 50.0%
CCATTTGACATGCGTCCTGA+TGG + chr3.4:69675870-69675889 None:intergenic 50.0%
CTCCACACACCATACTGTTG+TGG + chr3.4:69676995-69677014 None:intergenic 50.0%
GGCGACTCTACAAGTGATAC+CGG - chr3.4:69675774-69675793 MS.gene032027:CDS 50.0%
GGTTCCAGGGAACTTTCCAA+TGG - chr3.4:69676763-69676782 MS.gene032027:CDS 50.0%
TAGTGGAGTCACTGCACCAA+AGG - chr3.4:69676240-69676259 MS.gene032027:CDS 50.0%
AGAAGGAGCGGTAGAGCTAG+TGG - chr3.4:69676742-69676761 MS.gene032027:CDS 55.0%
CACCCCATTGGAAAGTTCCC+TGG + chr3.4:69676770-69676789 None:intergenic 55.0%
CGGTAGAGCTAGTGGTTCCA+GGG - chr3.4:69676750-69676769 MS.gene032027:CDS 55.0%
GCGGTAGAGCTAGTGGTTCC+AGG - chr3.4:69676749-69676768 MS.gene032027:CDS 60.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 69675672 69677346 69675672 ID=MS.gene032027
chr3.4 mRNA 69675672 69677346 69675672 ID=MS.gene032027.t1;Parent=MS.gene032027
chr3.4 exon 69677106 69677346 69677106 ID=MS.gene032027.t1.exon1;Parent=MS.gene032027.t1
chr3.4 CDS 69677106 69677346 69677106 ID=cds.MS.gene032027.t1;Parent=MS.gene032027.t1
chr3.4 exon 69676690 69676908 69676690 ID=MS.gene032027.t1.exon2;Parent=MS.gene032027.t1
chr3.4 CDS 69676690 69676908 69676690 ID=cds.MS.gene032027.t1;Parent=MS.gene032027.t1
chr3.4 exon 69676451 69676593 69676451 ID=MS.gene032027.t1.exon3;Parent=MS.gene032027.t1
chr3.4 CDS 69676451 69676593 69676451 ID=cds.MS.gene032027.t1;Parent=MS.gene032027.t1
chr3.4 exon 69676014 69676287 69676014 ID=MS.gene032027.t1.exon4;Parent=MS.gene032027.t1
chr3.4 CDS 69676014 69676287 69676014 ID=cds.MS.gene032027.t1;Parent=MS.gene032027.t1
chr3.4 exon 69675672 69675910 69675672 ID=MS.gene032027.t1.exon5;Parent=MS.gene032027.t1
chr3.4 CDS 69675672 69675910 69675672 ID=cds.MS.gene032027.t1;Parent=MS.gene032027.t1
Gene Sequence

>MS.gene032027

ATGAAGATCTTCATTCTGTTTGGTATCACCTTTGCATGTGGCTTTTTTGGAAACTTTATTTCAAATGCTAATCCTCTACCGTATGAAGCCATATTCAACTTCGGCGACTCTACAAGTGATACCGGAAATGCTGCATTTGATCACCTCAAAGAAATGGAAAAATTAATTCCTTATGGTTCAACATACTTCAAACATCCATCAGGACGCATGTCAAATGGACGACTCATCATAGATTTCATAGGTACTTTTACACATACTTTTTTTTCTTAAATAAATTCTTTTTGTATTAATGAAATAGTAAATAACAAAAAAAAAAATACTACCAAGAACTCTAAAATAATCTATTTTATGAGGTCGTTATAATTAAAATCAATAATTTTTAAGGTTGATACATTTCCGATTGAAAATTTCACTAGCTCATTCTCATTTTAATTGTAGCTGAGGCATATGGGTTGCCATTTTTACCGGCCTATAAGAATATCACCAAAATCCCAGATGCTGTAAAAAAGGGAGTTAATTTCGCTTATGCCGGTTCAACTGCACTTGATGTCAAATATTTTAGTGGTATTAGTGGAGTCACTGCACCAAAGGAATCATTAAATGTGCAATTTGATTGGTTTAAGAAGCTAAAACCCGACTTATGTAAAAGCAAAGAAGGTTTTGTCCTAAATCCTTGCATGTTATTTTTCTGTGATATAATTGGTTTATCATCTATATGCCTAACAATACTTTTGTTTTGTTATGAGTTCACAGAATGTGACAGCTTCTTCAAAAACTCATTGTTTATAGTGGGAGAGATTGGTGGAAATGATATTTTTTATCATCTTTCTAAAACTATTACTGAACTACGAGAGATAGTTCCCTTGATGGTTGAATCAATCAAAAATACCACCAATGTATGTTATACAAATCTTAAGTAATTAAATGTTTACATATTAGCAAAAAATAAATAACTGTTGACTTCAATTGTAGAATAATTGTGTTTAAGTTATAGGTATTAGTGAATAAATAATGGTCTTGGAAAAATGTAATAGAGATTTATTTAATTATGTTTGTCAGGCTTTAATTGAAGAAGGAGCGGTAGAGCTAGTGGTTCCAGGGAACTTTCCAATGGGGTGTAATACTGACATATTGTCAAAAAAGATTAGTCAGAAGAAAGAAGACTATGACGAATTTGGATGTTTGACAGCTTACAACACTCTCATCGAATACTTTAATGAGCAGCTAAAAAAATCCATAGAGACAATAAAACAGAAACACCCTCAAGCTAAGATAGTATATTTTGACTATTACAACGATGCCAGACGTTTATATCAAGCACCACAACAGTATGGTGTGTGGAGCAATTATTTTCTTTCCTTGTTAAATTTTCATTGTTTTATTCTTGTCAAATTTGTTTGATCCCATTCACTAATTTATGTACATTAATGATGTAGGTTTTACTTCTGATAAGGTCGAGGTTTTGAAAGCATGTTGTGGAGGAATTGGACCATATCATCATGATCAGTATTGGTGTGGAACGCCAAATACAACAGTTTGCTCTGATCCTTCAAAACTAATAAATTGGGATGGACCACATTTTACCGAAGCCGCTTATAAGCAAATAGCTAAAGGTTTAATCGAAGGACCTTTTGCATATCCTTCTCTAAAACCTGCTCCTTTCAAGATAGCTTAG
Protein sequence

>MS.gene032027.t1

MKIFILFGITFACGFFGNFISNANPLPYEAIFNFGDSTSDTGNAAFDHLKEMEKLIPYGSTYFKHPSGRMSNGRLIIDFIAEAYGLPFLPAYKNITKIPDAVKKGVNFAYAGSTALDVKYFSGISGVTAPKESLNVQFDWFKKLKPDLCKSKEECDSFFKNSLFIVGEIGGNDIFYHLSKTITELREIVPLMVESIKNTTNALIEEGAVELVVPGNFPMGCNTDILSKKISQKKEDYDEFGCLTAYNTLIEYFNEQLKKSIETIKQKHPQAKIVYFDYYNDARRLYQAPQQYGFTSDKVEVLKACCGGIGPYHHDQYWCGTPNTTVCSDPSKLINWDGPHFTEAAYKQIAKGLIEGPFAYPSLKPAPFKIA