AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene032307

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032307.t1 MTR_8g059150 97.008 635 19 0 1 635 1 635 0.0 1261
MS.gene032307.t1 MTR_2g079980 69.167 600 182 3 35 634 1 597 0.0 865
MS.gene032307.t1 MTR_5g025470 54.530 607 248 7 35 627 45 637 0.0 645
MS.gene032307.t1 MTR_1g093990 51.246 642 289 9 1 626 27 660 0.0 632
MS.gene032307.t1 MTR_1g096580 48.490 629 282 11 35 627 45 667 0.0 558
MS.gene032307.t1 MTR_1g054960 46.711 608 283 6 37 627 1 584 0.0 549
MS.gene032307.t1 MTR_1g054935 45.116 645 297 8 8 627 127 739 0.0 546
MS.gene032307.t1 MTR_1g054935 46.465 594 275 6 59 627 2 577 0.0 533
MS.gene032307.t1 MTR_7g106880 46.016 615 282 7 35 624 136 725 6.03e-174 513
MS.gene032307.t1 MTR_7g106880 46.678 587 270 6 63 624 6 574 7.38e-173 504
MS.gene032307.t1 MTR_5g096390 44.044 638 323 10 18 626 48 680 1.91e-170 502
MS.gene032307.t1 MTR_1g108340 30.450 555 346 11 55 582 82 623 4.08e-82 273
MS.gene032307.t1 MTR_1g108340 30.450 555 346 11 55 582 82 623 6.58e-82 273
MS.gene032307.t1 MTR_7g100120 29.153 614 378 14 33 600 81 683 1.15e-72 249
MS.gene032307.t1 MTR_4g076970 31.429 525 318 12 64 554 49 565 1.75e-68 236
MS.gene032307.t1 MTR_6g066240 30.565 566 348 15 41 574 38 590 1.53e-67 234
MS.gene032307.t1 MTR_4g116540 31.207 580 362 16 66 626 75 636 2.01e-67 232
MS.gene032307.t1 MTR_4g094050 29.362 596 369 14 3 571 22 592 5.61e-67 232
MS.gene032307.t1 MTR_4g076900 28.995 607 371 16 60 624 23 611 4.89e-66 229
MS.gene032307.t1 MTR_4g076940 31.846 493 285 12 60 517 47 523 5.46e-66 229
MS.gene032307.t1 MTR_4g076940 31.846 493 285 12 60 517 87 563 7.02e-66 230
MS.gene032307.t1 MTR_1g115790 30.686 554 340 12 62 578 118 664 8.67e-66 230
MS.gene032307.t1 MTR_4g094060 30.526 570 346 14 3 547 22 566 9.25e-66 229
MS.gene032307.t1 MTR_2g078080 29.760 625 378 19 30 624 11 604 6.04e-63 219
MS.gene032307.t1 MTR_4g094090 30.127 551 343 16 49 571 12 548 1.56e-62 219
MS.gene032307.t1 MTR_4g094010 31.907 514 294 13 62 541 46 537 8.49e-62 217
MS.gene032307.t1 MTR_1g094660 29.535 667 388 20 6 625 467 1098 1.41e-61 222
MS.gene032307.t1 MTR_8g093840 29.293 594 369 17 66 624 56 633 1.42e-60 213
MS.gene032307.t1 MTR_3g096410 28.116 658 412 16 3 624 1 633 4.19e-59 209
MS.gene032307.t1 MTR_1g094660 39.344 305 166 5 6 304 467 758 6.40e-59 213
MS.gene032307.t1 MTR_4g093845 30.394 533 339 12 62 571 55 578 1.32e-58 208
MS.gene032307.t1 MTR_3g463680 28.716 592 385 17 4 574 785 1360 4.61e-57 209
MS.gene032307.t1 MTR_3g463680 25.556 540 334 13 58 542 160 686 9.78e-35 142
MS.gene032307.t1 MTR_4g011640 28.064 563 370 14 39 580 838 1386 1.51e-56 207
MS.gene032307.t1 MTR_4g011640 26.488 521 324 13 59 528 164 676 3.11e-38 152
MS.gene032307.t1 MTR_7g098780 27.957 558 373 14 36 575 817 1363 6.22e-56 206
MS.gene032307.t1 MTR_7g098780 26.286 525 327 15 66 539 175 690 1.15e-39 157
MS.gene032307.t1 MTR_7g104150 27.660 564 365 14 35 573 854 1399 2.32e-55 204
MS.gene032307.t1 MTR_7g104150 25.581 559 347 16 59 560 177 723 1.12e-35 144
MS.gene032307.t1 MTR_7g104130 27.788 565 363 15 35 573 854 1399 2.67e-55 204
MS.gene032307.t1 MTR_7g104130 33.214 280 150 7 59 302 177 455 1.92e-33 137
MS.gene032307.t1 MTR_1g050525 27.726 642 413 19 9 616 834 1458 3.26e-55 204
MS.gene032307.t1 MTR_1g050525 25.088 566 351 17 53 560 165 715 5.10e-41 161
MS.gene032307.t1 MTR_7g098750 27.861 603 379 20 21 588 563 1144 8.42e-55 202
MS.gene032307.t1 MTR_7g098750 25.121 414 281 10 167 560 27 431 1.87e-29 125
MS.gene032307.t1 MTR_4g011630 27.679 560 361 15 36 570 838 1378 1.07e-54 202
MS.gene032307.t1 MTR_4g011630 26.346 520 326 13 59 528 166 678 8.97e-38 151
MS.gene032307.t1 MTR_7g098750 28.227 581 368 19 36 588 855 1414 1.30e-54 202
MS.gene032307.t1 MTR_7g098750 26.412 549 341 16 66 560 162 701 3.10e-44 171
MS.gene032307.t1 MTR_7g098760 27.036 614 405 16 5 588 811 1411 1.40e-54 202
MS.gene032307.t1 MTR_7g098760 25.040 619 388 18 66 625 162 763 2.32e-42 165
MS.gene032307.t1 MTR_2g102640 28.049 574 366 16 36 582 830 1383 1.58e-54 201
MS.gene032307.t1 MTR_2g102640 24.522 575 359 17 59 573 160 719 1.25e-42 166
MS.gene032307.t1 MTR_1g099570 27.731 595 369 16 59 626 43 603 1.90e-54 196
MS.gene032307.t1 MTR_7g104130 29.191 507 318 12 66 550 883 1370 1.94e-54 201
MS.gene032307.t1 MTR_7g104130 33.214 280 150 7 59 302 177 455 1.89e-33 137
MS.gene032307.t1 MTR_7g104100 27.046 562 374 11 12 554 831 1375 3.12e-54 201
MS.gene032307.t1 MTR_7g104100 26.118 559 330 20 66 560 182 721 3.40e-38 152
MS.gene032307.t1 MTR_7g104110 28.014 564 363 15 35 573 846 1391 9.20e-54 199
MS.gene032307.t1 MTR_7g104110 26.212 557 346 17 59 560 171 717 2.29e-40 159
MS.gene032307.t1 MTR_2g102660 27.749 573 369 15 36 582 827 1380 1.05e-53 199
MS.gene032307.t1 MTR_2g102660 25.556 540 329 16 59 540 160 684 3.51e-43 167
MS.gene032307.t1 MTR_1g063920 28.249 531 310 13 30 513 470 976 1.28e-53 198
MS.gene032307.t1 MTR_2g102670 27.574 573 370 15 36 582 810 1363 1.82e-52 195
MS.gene032307.t1 MTR_2g102670 22.976 531 336 14 59 540 160 666 6.74e-35 142
MS.gene032307.t1 MTR_8g107450 41.155 277 152 4 29 300 35 305 2.92e-52 193
MS.gene032307.t1 MTR_7g098750 30.103 485 297 14 36 497 855 1320 3.77e-52 194
MS.gene032307.t1 MTR_7g098750 26.412 549 341 16 66 560 162 701 3.62e-44 170
MS.gene032307.t1 MTR_7g098320 27.807 579 373 18 36 588 847 1406 4.29e-52 194
MS.gene032307.t1 MTR_7g098320 25.953 551 341 17 66 560 158 697 2.09e-40 159
MS.gene032307.t1 MTR_3g107870 30.106 568 348 21 35 574 861 1407 5.69e-52 194
MS.gene032307.t1 MTR_3g107870 25.445 562 330 18 66 560 166 705 3.26e-41 161
MS.gene032307.t1 MTR_7g098740 26.117 582 379 16 36 588 813 1372 7.50e-52 194
MS.gene032307.t1 MTR_7g098740 25.760 559 352 16 66 570 162 711 2.45e-43 168
MS.gene032307.t1 MTR_7g098800 27.561 537 360 12 36 556 775 1298 7.80e-52 193
MS.gene032307.t1 MTR_7g098800 27.208 566 335 21 66 570 133 682 1.06e-43 169
MS.gene032307.t1 MTR_4g123850 27.143 560 365 14 35 570 830 1370 8.76e-52 193
MS.gene032307.t1 MTR_4g123850 24.640 556 341 18 66 560 168 706 1.23e-40 160
MS.gene032307.t1 MTR_2g101090 27.337 567 361 16 35 572 842 1386 1.08e-51 193
MS.gene032307.t1 MTR_2g101090 22.509 582 360 19 57 581 173 720 1.75e-28 122
MS.gene032307.t1 MTR_8g014360 26.446 605 389 15 4 574 840 1422 2.97e-51 192
MS.gene032307.t1 MTR_8g014360 25.258 582 363 17 59 581 171 739 9.02e-40 157
MS.gene032307.t1 MTR_7g101780 42.742 248 139 3 60 304 508 755 3.11e-51 191
MS.gene032307.t1 MTR_4g113070 26.677 641 411 19 20 621 793 1413 1.51e-50 189
MS.gene032307.t1 MTR_4g113070 26.020 588 350 19 52 573 139 707 5.45e-35 142
MS.gene032307.t1 MTR_4g076940 29.932 441 262 11 112 517 2 430 1.72e-50 185
MS.gene032307.t1 MTR_5g070320 28.058 556 364 12 35 569 829 1369 2.46e-50 189
MS.gene032307.t1 MTR_5g070320 26.829 533 338 14 58 542 161 689 4.81e-44 170
MS.gene032307.t1 MTR_5g070320 28.086 559 360 13 35 569 542 1082 2.57e-50 189
MS.gene032307.t1 MTR_5g070320 25.193 389 274 9 167 542 18 402 1.26e-27 119
MS.gene032307.t1 MTR_5g070320 28.058 556 364 12 35 569 638 1178 2.85e-50 189
MS.gene032307.t1 MTR_5g070320 25.052 483 312 13 106 542 20 498 2.86e-31 130
MS.gene032307.t1 MTR_1g011650 27.807 561 367 15 35 573 848 1392 2.92e-50 189
MS.gene032307.t1 MTR_1g011650 27.022 544 326 20 66 551 166 696 4.30e-36 145
MS.gene032307.t1 MTR_7g098370 25.561 579 386 15 36 588 813 1372 2.00e-49 186
MS.gene032307.t1 MTR_7g098370 25.709 529 328 15 66 540 162 679 1.01e-40 160
MS.gene032307.t1 MTR_5g030910 38.722 266 157 4 37 300 25 286 2.07e-49 184
MS.gene032307.t1 MTR_1g011640 26.829 574 356 13 35 573 825 1369 3.33e-49 186
MS.gene032307.t1 MTR_1g011640 28.177 543 321 20 66 551 154 684 1.68e-34 141
MS.gene032307.t1 MTR_4g054020 27.655 499 318 13 104 571 4 490 6.68e-49 180
MS.gene032307.t1 MTR_4g058000 38.111 307 173 5 1 304 456 748 1.88e-48 183
MS.gene032307.t1 MTR_1g492950 27.513 567 363 16 36 575 866 1411 4.63e-48 182
MS.gene032307.t1 MTR_1g492950 27.148 512 308 18 53 513 178 675 3.66e-40 158
MS.gene032307.t1 MTR_7g098300 26.516 577 379 16 36 588 851 1406 5.55e-47 179
MS.gene032307.t1 MTR_7g098300 26.134 551 340 16 66 560 162 701 1.00e-41 163
MS.gene032307.t1 MTR_4g011620 28.493 544 342 16 36 554 828 1349 5.60e-47 179
MS.gene032307.t1 MTR_4g011620 27.574 544 311 16 60 540 155 678 8.59e-41 160
MS.gene032307.t1 MTR_8g014360 28.367 490 296 15 4 461 840 1306 9.28e-44 169
MS.gene032307.t1 MTR_8g014360 25.084 598 366 18 43 581 165 739 7.14e-40 157
MS.gene032307.t1 MTR_2g095390 26.540 633 385 20 52 635 109 710 2.33e-42 163
MS.gene032307.t1 MTR_7g098320 25.953 551 341 17 66 560 158 697 1.07e-40 160
MS.gene032307.t1 MTR_7g098320 28.507 442 278 14 36 456 847 1271 1.11e-38 154
MS.gene032307.t1 MTR_7g098890 27.917 480 297 16 36 489 756 1212 1.19e-37 150
MS.gene032307.t1 MTR_7g098890 25.912 548 353 18 58 570 128 657 4.83e-34 139
MS.gene032307.t1 MTR_3g040670 37.657 239 141 5 86 319 201 436 6.71e-34 135
MS.gene032307.t1 MTR_4g089130 66.667 84 28 0 181 264 1 84 2.73e-32 120
MS.gene032307.t1 MTR_7g407080 24.802 504 308 16 75 556 120 574 1.08e-23 105
MS.gene032307.t1 MTR_8g103450 33.180 217 112 8 35 248 221 407 1.65e-21 97.8
MS.gene032307.t1 MTR_1567s0010 34.694 147 85 4 77 221 253 390 4.74e-18 87.8
MS.gene032307.t1 MTR_5g075955 34.375 192 110 7 63 247 366 548 6.10e-17 85.1
MS.gene032307.t1 MTR_5g075955 34.375 192 110 7 63 247 478 660 9.02e-17 84.7
MS.gene032307.t1 MTR_6g009070 30.864 243 152 10 65 299 950 1184 2.03e-16 84.0
MS.gene032307.t1 MTR_6g009070 28.866 194 124 7 63 250 315 500 1.47e-11 68.2
MS.gene032307.t1 MTR_6g009080 31.628 215 133 8 66 274 230 436 3.67e-16 82.0
MS.gene032307.t1 MTR_6g012535 30.047 213 123 9 65 264 15 214 3.73e-16 78.2
MS.gene032307.t1 MTR_6g008800 31.481 216 134 8 65 274 1023 1230 5.55e-16 82.4
MS.gene032307.t1 MTR_6g008800 29.381 194 123 7 63 250 375 560 8.04e-13 72.4
MS.gene032307.t1 MTR_6g009200 32.292 192 118 6 65 250 1036 1221 6.34e-16 82.4
MS.gene032307.t1 MTR_6g009200 29.381 194 123 7 63 250 375 560 2.29e-13 74.3
MS.gene032307.t1 MTR_1g059830 32.420 219 119 9 37 247 380 577 1.33e-15 80.9
MS.gene032307.t1 MTR_6g009030 31.771 192 119 6 65 250 1015 1200 1.50e-15 81.3
MS.gene032307.t1 MTR_6g009030 30.412 194 121 7 63 250 375 560 6.66e-14 75.9
MS.gene032307.t1 MTR_6g009110 32.812 192 117 6 65 250 1034 1219 2.13e-15 80.9
MS.gene032307.t1 MTR_6g009110 30.412 194 121 7 63 250 382 567 6.36e-14 75.9
MS.gene032307.t1 MTR_6g009150 30.594 219 132 10 65 274 1033 1240 1.06e-14 78.6
MS.gene032307.t1 MTR_6g009150 30.412 194 121 7 63 250 376 561 2.96e-14 77.0
MS.gene032307.t1 MTR_7g079540 30.172 232 130 9 63 271 97 319 1.18e-14 76.3
MS.gene032307.t1 MTR_6g008820 31.795 195 114 8 65 250 697 881 2.15e-14 77.4
MS.gene032307.t1 MTR_6g008820 30.928 194 120 7 63 250 41 226 3.58e-14 76.6
MS.gene032307.t1 MTR_1309s0010 27.313 227 120 10 7 220 402 596 2.16e-14 77.0
MS.gene032307.t1 MTR_6g008820 31.795 195 114 8 65 250 805 989 2.24e-14 77.4
MS.gene032307.t1 MTR_6g008820 29.167 192 122 7 65 250 151 334 2.01e-12 70.9
MS.gene032307.t1 MTR_6g008820 31.795 195 114 8 65 250 889 1073 2.25e-14 77.4
MS.gene032307.t1 MTR_6g008820 30.928 194 120 7 63 250 233 418 3.40e-14 76.6
MS.gene032307.t1 MTR_3g086430 26.336 262 173 9 1 250 947 1200 2.35e-14 77.4
MS.gene032307.t1 MTR_7g060570 27.309 249 136 8 70 314 932 1139 2.68e-14 77.0
MS.gene032307.t1 MTR_7g079540 30.806 211 115 8 63 250 97 299 2.70e-14 74.7
MS.gene032307.t1 MTR_6g008820 31.795 195 114 8 65 250 1019 1203 2.75e-14 77.0
MS.gene032307.t1 MTR_6g008820 30.928 194 120 7 63 250 363 548 3.95e-14 76.6
MS.gene032307.t1 MTR_6g465300 31.905 210 121 12 66 265 488 685 3.15e-14 76.6
MS.gene032307.t1 MTR_6g465300 31.905 210 121 12 66 265 488 685 3.33e-14 76.6
MS.gene032307.t1 MTR_5g075960 31.053 190 119 7 63 247 480 662 5.00e-14 75.9
MS.gene032307.t1 MTR_5g029750 33.333 183 108 5 74 250 1014 1188 7.28e-14 75.9
MS.gene032307.t1 MTR_7g051100 28.194 227 147 9 63 283 371 587 1.00e-13 75.5
MS.gene032307.t1 MTR_7g051100 30.102 196 125 7 65 254 1011 1200 7.22e-13 72.4
MS.gene032307.t1 MTR_4g109720 26.941 219 147 8 65 278 403 613 1.69e-13 73.9
MS.gene032307.t1 MTR_7g102070 31.633 196 116 8 63 250 440 625 2.82e-13 73.9
MS.gene032307.t1 MTR_7g102070 28.972 214 130 9 74 278 1106 1306 9.71e-13 72.0
MS.gene032307.t1 MTR_3g099990 25.214 234 156 4 23 246 495 719 4.10e-13 73.2
MS.gene032307.t1 MTR_8g022270 29.897 194 116 7 63 247 612 794 4.69e-13 73.2
MS.gene032307.t1 MTR_7g091350 44.156 77 43 0 189 265 81 157 6.46e-13 67.4
MS.gene032307.t1 MTR_7g091380 29.878 164 105 3 59 220 565 720 6.82e-13 72.8
MS.gene032307.t1 MTR_7g091380 24.490 245 163 6 10 246 1424 1654 3.28e-11 67.4
MS.gene032307.t1 MTR_7g091380 29.878 164 105 3 59 220 363 518 7.34e-13 72.8
MS.gene032307.t1 MTR_7g091380 24.898 245 162 7 10 246 1222 1452 3.17e-11 67.4
MS.gene032307.t1 MTR_7g091380 29.878 164 105 3 59 220 383 538 7.55e-13 72.8
MS.gene032307.t1 MTR_7g091380 24.898 245 162 7 10 246 1242 1472 3.37e-11 67.4
MS.gene032307.t1 MTR_7g091380 29.878 164 105 3 59 220 565 720 7.70e-13 72.8
MS.gene032307.t1 MTR_7g091380 24.898 245 162 7 10 246 1424 1654 3.31e-11 67.4
MS.gene032307.t1 MTR_4g123990 30.412 194 116 8 66 250 1053 1236 1.52e-12 71.6
MS.gene032307.t1 MTR_3g437990 29.480 173 109 3 78 246 556 719 1.55e-12 71.2
MS.gene032307.t1 MTR_6g009090 30.000 180 112 7 77 250 404 575 2.18e-12 70.5
MS.gene032307.t1 MTR_1g063170 30.108 186 110 7 74 250 1080 1254 2.64e-12 70.9
MS.gene032307.t1 MTR_1g063170 31.122 196 117 8 63 250 413 598 5.32e-12 69.7
MS.gene032307.t1 MTR_4g077930 30.108 186 111 8 74 250 950 1125 3.15e-12 70.5
MS.gene032307.t1 MTR_4g077930 30.108 186 111 8 74 250 1059 1234 3.59e-12 70.5
MS.gene032307.t1 MTR_4g124000 30.108 186 111 8 74 250 1061 1236 4.85e-12 69.7
MS.gene032307.t1 MTR_4g124000 27.586 232 140 9 63 282 392 607 9.23e-11 65.9
MS.gene032307.t1 MTR_6g011680 30.108 186 110 7 74 250 1033 1207 6.23e-12 69.7
MS.gene032307.t1 MTR_4g081190 28.054 221 141 8 73 286 367 576 1.06e-11 68.9
MS.gene032307.t1 MTR_4g081190 26.786 224 136 9 43 250 978 1189 1.31e-11 68.6
MS.gene032307.t1 MTR_3g093430 30.412 194 121 7 63 250 378 563 1.40e-11 68.6
MS.gene032307.t1 MTR_3g093430 26.293 232 147 10 66 283 1014 1235 1.73e-11 68.2
MS.gene032307.t1 MTR_8g107410 29.412 238 150 8 34 265 3 228 2.28e-11 65.1
MS.gene032307.t1 MTR_2g018320 29.032 186 122 6 66 247 376 555 3.26e-11 67.4
MS.gene032307.t1 MTR_6g088670 29.744 195 123 7 62 250 372 558 3.79e-11 67.0
MS.gene032307.t1 MTR_3g107800 28.415 183 118 6 74 250 1051 1226 4.09e-11 67.0
MS.gene032307.t1 MTR_7g033710 27.807 187 115 8 74 250 450 626 4.37e-11 66.2
MS.gene032307.t1 MTR_4g124050 29.032 186 113 8 74 250 1075 1250 6.74e-11 66.2
MS.gene032307.t1 MTR_6g034755 30.476 210 113 11 64 265 643 827 6.83e-11 66.2
MS.gene032307.t1 MTR_1g025560 29.508 183 115 5 74 250 1019 1193 8.12e-11 65.9
MS.gene032307.t1 MTR_4g124000 27.586 232 140 9 63 282 392 607 9.94e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032307.t1 AT4G27420 57.344 640 260 8 1 631 1 636 0.0 692
MS.gene032307.t1 AT1G31770 54.758 599 261 5 35 627 51 645 0.0 646
MS.gene032307.t1 AT3G25620 51.364 623 279 6 21 624 52 669 0.0 610
MS.gene032307.t1 AT5G06530 44.984 618 290 8 37 629 157 749 0.0 539
MS.gene032307.t1 AT5G06530 44.984 618 290 8 37 629 157 749 0.0 539
MS.gene032307.t1 AT1G71960 46.656 643 299 15 22 627 25 660 0.0 535
MS.gene032307.t1 AT5G06530 46.225 543 259 6 37 554 157 691 2.26e-169 499
MS.gene032307.t1 AT3G13220 41.501 653 341 9 9 635 45 682 2.65e-162 481
MS.gene032307.t1 AT5G06530 46.278 497 241 5 83 554 1 496 9.51e-158 463
MS.gene032307.t1 AT3G25620 51.338 411 180 4 21 413 52 460 7.99e-136 405
MS.gene032307.t1 AT2G01320 30.948 559 354 12 49 582 69 620 5.03e-88 287
MS.gene032307.t1 AT2G01320 30.948 559 354 12 49 582 69 620 5.03e-88 287
MS.gene032307.t1 AT2G01320 30.948 559 354 12 49 582 69 620 2.18e-87 288
MS.gene032307.t1 AT2G01320 30.948 559 354 12 49 582 69 620 2.91e-87 287
MS.gene032307.t1 AT2G01320 30.948 559 354 12 49 582 69 620 3.33e-87 287
MS.gene032307.t1 AT2G01320 30.948 559 354 12 49 582 69 620 3.33e-87 287
MS.gene032307.t1 AT2G01320 33.333 459 281 9 49 489 69 520 3.34e-79 261
MS.gene032307.t1 AT2G01320 33.333 459 281 9 49 489 69 520 3.34e-79 261
MS.gene032307.t1 AT2G37360 30.375 586 371 12 37 590 98 678 1.11e-74 254
MS.gene032307.t1 AT5G13580 30.360 583 352 14 37 578 68 637 4.31e-69 239
MS.gene032307.t1 AT3G55100 31.746 567 346 14 37 578 22 572 6.62e-69 237
MS.gene032307.t1 AT3G55100 31.746 567 346 14 37 578 22 572 6.62e-69 237
MS.gene032307.t1 AT2G13610 31.410 624 365 21 48 632 43 642 7.47e-69 236
MS.gene032307.t1 AT3G55090 29.231 585 345 14 37 578 88 646 7.52e-69 238
MS.gene032307.t1 AT3G55110 31.469 572 358 16 31 578 57 618 3.27e-68 236
MS.gene032307.t1 AT3G53510 31.123 543 337 12 60 578 120 649 1.45e-67 234
MS.gene032307.t1 AT3G55130 32.867 572 333 20 37 571 73 630 3.61e-67 233
MS.gene032307.t1 AT1G17840 30.991 555 315 15 62 574 65 593 2.17e-66 231
MS.gene032307.t1 AT3G21090 31.569 529 313 14 64 556 43 558 2.25e-65 228
MS.gene032307.t1 AT1G51500 32.854 487 282 11 64 517 42 516 5.39e-65 226
MS.gene032307.t1 AT1G51460 29.952 631 339 21 64 626 28 623 7.30e-65 226
MS.gene032307.t1 AT2G39350 29.649 570 338 14 55 578 98 650 2.20e-64 226
MS.gene032307.t1 AT4G15236 29.322 590 361 16 10 570 767 1329 1.02e-62 226
MS.gene032307.t1 AT4G15236 26.497 551 337 21 59 554 145 682 1.13e-38 154
MS.gene032307.t1 AT4G15233 29.264 557 350 12 35 570 736 1269 5.60e-61 221
MS.gene032307.t1 AT4G15233 25.465 538 344 17 66 554 93 622 2.67e-36 146
MS.gene032307.t1 AT4G15233 29.264 557 350 12 35 570 736 1269 5.60e-61 221
MS.gene032307.t1 AT4G15233 25.465 538 344 17 66 554 93 622 2.67e-36 146
MS.gene032307.t1 AT4G15233 29.264 557 350 12 35 570 789 1322 5.86e-61 221
MS.gene032307.t1 AT4G15233 25.232 539 335 19 66 554 155 675 8.37e-32 132
MS.gene032307.t1 AT4G15233 29.264 557 350 12 35 570 798 1331 7.17e-61 221
MS.gene032307.t1 AT4G15233 25.788 539 341 18 66 554 155 684 3.40e-36 146
MS.gene032307.t1 AT4G15233 29.264 557 350 12 35 570 780 1313 8.16e-61 220
MS.gene032307.t1 AT4G15233 26.296 521 343 17 66 554 155 666 4.37e-38 152
MS.gene032307.t1 AT5G19410 29.809 577 364 16 66 626 66 617 1.12e-60 213
MS.gene032307.t1 AT5G19410 29.809 577 364 16 66 626 75 626 1.77e-60 213
MS.gene032307.t1 AT3G53480 27.036 614 398 16 4 588 816 1408 9.25e-60 217
MS.gene032307.t1 AT3G53480 25.636 550 354 16 53 554 176 718 1.95e-39 156
MS.gene032307.t1 AT2G37280 28.292 562 364 14 35 573 653 1198 9.78e-60 217
MS.gene032307.t1 AT2G37280 24.324 518 340 15 82 551 12 525 9.97e-35 141
MS.gene032307.t1 AT2G37280 28.292 562 364 14 35 573 840 1385 1.01e-59 217
MS.gene032307.t1 AT2G37280 23.446 563 350 15 66 551 154 712 1.53e-35 144
MS.gene032307.t1 AT2G37280 28.136 558 363 13 35 570 811 1352 1.32e-59 217
MS.gene032307.t1 AT2G37280 24.719 534 350 15 66 551 154 683 4.38e-39 155
MS.gene032307.t1 AT1G53270 29.043 606 381 18 31 624 13 581 2.61e-59 209
MS.gene032307.t1 AT1G53390 31.765 510 292 14 60 526 517 1013 3.79e-59 215
MS.gene032307.t1 AT4G15230 28.700 554 357 13 35 570 806 1339 6.72e-59 214
MS.gene032307.t1 AT4G15230 24.460 556 357 17 59 560 148 694 1.86e-36 147
MS.gene032307.t1 AT4G15230 28.700 554 357 13 35 570 806 1339 6.72e-59 214
MS.gene032307.t1 AT4G15230 24.460 556 357 17 59 560 148 694 1.86e-36 147
MS.gene032307.t1 AT4G15230 28.700 554 357 13 35 570 727 1260 6.92e-59 214
MS.gene032307.t1 AT4G15230 24.460 556 357 17 59 560 69 615 1.82e-36 147
MS.gene032307.t1 AT4G15233 28.250 577 354 12 35 570 798 1355 1.53e-58 214
MS.gene032307.t1 AT4G15233 25.788 539 341 18 66 554 155 684 3.06e-36 146
MS.gene032307.t1 AT3G16340 27.273 616 399 16 35 625 812 1403 6.61e-57 209
MS.gene032307.t1 AT3G16340 26.978 556 347 15 59 562 155 703 3.90e-43 167
MS.gene032307.t1 AT3G16340 27.273 616 399 16 35 625 807 1398 8.25e-57 208
MS.gene032307.t1 AT3G16340 26.486 555 346 14 59 562 155 698 9.53e-41 160
MS.gene032307.t1 AT4G15233 29.014 517 333 11 75 570 685 1188 9.96e-57 208
MS.gene032307.t1 AT4G15233 25.670 522 345 16 66 554 93 604 4.89e-38 152
MS.gene032307.t1 AT4G15233 29.014 517 333 11 75 570 685 1188 9.96e-57 208
MS.gene032307.t1 AT4G15233 25.670 522 345 16 66 554 93 604 4.89e-38 152
MS.gene032307.t1 AT4G15215 30.090 555 348 16 35 570 800 1333 3.49e-56 206
MS.gene032307.t1 AT4G15215 24.089 631 392 19 3 560 72 688 7.83e-39 154
MS.gene032307.t1 AT4G15215 30.090 555 348 16 35 570 800 1333 3.49e-56 206
MS.gene032307.t1 AT4G15215 24.089 631 392 19 3 560 72 688 7.83e-39 154
MS.gene032307.t1 AT4G15215 30.090 555 348 16 35 570 800 1333 3.49e-56 206
MS.gene032307.t1 AT4G15215 24.089 631 392 19 3 560 72 688 7.83e-39 154
MS.gene032307.t1 AT4G15215 30.090 555 348 16 35 570 800 1333 3.49e-56 206
MS.gene032307.t1 AT4G15215 24.089 631 392 19 3 560 72 688 7.83e-39 154
MS.gene032307.t1 AT4G15215 30.090 555 348 16 35 570 800 1333 3.49e-56 206
MS.gene032307.t1 AT4G15215 24.089 631 392 19 3 560 72 688 7.83e-39 154
MS.gene032307.t1 AT4G15215 30.090 555 348 16 35 570 796 1329 3.52e-56 206
MS.gene032307.t1 AT4G15215 23.810 630 388 18 3 560 75 684 7.68e-37 148
MS.gene032307.t1 AT4G15215 30.090 555 348 16 35 570 793 1326 3.85e-56 206
MS.gene032307.t1 AT4G15215 23.810 630 388 18 3 560 72 681 1.04e-36 147
MS.gene032307.t1 AT4G15215 30.090 555 348 16 35 570 793 1326 3.85e-56 206
MS.gene032307.t1 AT4G15215 23.810 630 388 18 3 560 72 681 1.04e-36 147
MS.gene032307.t1 AT4G15215 30.090 555 348 16 35 570 793 1326 3.85e-56 206
MS.gene032307.t1 AT4G15215 23.810 630 388 18 3 560 72 681 1.04e-36 147
MS.gene032307.t1 AT4G15215 30.090 555 348 16 35 570 793 1326 3.85e-56 206
MS.gene032307.t1 AT4G15215 23.810 630 388 18 3 560 72 681 1.04e-36 147
MS.gene032307.t1 AT4G15215 30.090 555 348 16 35 570 803 1336 3.91e-56 206
MS.gene032307.t1 AT4G15215 24.083 627 397 17 3 560 75 691 6.91e-39 154
MS.gene032307.t1 AT1G59870 28.520 561 357 15 35 570 865 1406 3.05e-55 204
MS.gene032307.t1 AT1G59870 26.667 495 286 17 59 493 179 656 1.14e-40 160
MS.gene032307.t1 AT1G15520 27.516 636 417 19 4 614 794 1410 3.85e-55 203
MS.gene032307.t1 AT1G15520 24.555 562 355 16 66 570 169 718 1.61e-37 150
MS.gene032307.t1 AT2G37280 27.841 528 345 12 35 542 811 1322 2.16e-54 201
MS.gene032307.t1 AT2G37280 24.719 534 350 15 66 551 154 683 6.34e-39 154
MS.gene032307.t1 AT1G15210 29.055 561 354 17 35 570 838 1379 4.37e-54 200
MS.gene032307.t1 AT1G15210 25.623 562 352 17 55 562 176 725 3.15e-38 152
MS.gene032307.t1 AT5G52860 28.478 611 374 20 36 626 15 582 1.06e-53 194
MS.gene032307.t1 AT2G26910 27.671 571 372 16 35 581 816 1369 2.32e-53 198
MS.gene032307.t1 AT2G26910 24.955 561 356 13 60 565 144 694 9.83e-36 145
MS.gene032307.t1 AT2G29940 28.704 540 355 12 35 556 824 1351 2.53e-53 198
MS.gene032307.t1 AT2G29940 26.102 590 349 19 9 542 137 695 3.92e-43 167
MS.gene032307.t1 AT2G37010 26.490 604 386 12 60 625 494 1077 2.53e-53 197
MS.gene032307.t1 AT2G37010 26.490 604 386 12 60 625 494 1077 2.53e-53 197
MS.gene032307.t1 AT3G30842 28.067 538 354 13 37 556 821 1343 5.79e-53 197
MS.gene032307.t1 AT3G30842 25.880 568 353 19 49 561 147 701 3.01e-38 152
MS.gene032307.t1 AT4G15230 28.244 524 340 12 35 542 806 1309 6.43e-53 197
MS.gene032307.t1 AT4G15230 24.460 556 357 17 59 560 148 694 1.76e-36 147
MS.gene032307.t1 AT4G25750 28.464 534 337 14 59 585 23 518 1.88e-51 187
MS.gene032307.t1 AT1G66950 28.678 537 352 14 35 554 851 1373 2.07e-51 192
MS.gene032307.t1 AT1G66950 25.397 567 345 18 54 560 181 729 7.19e-39 154
MS.gene032307.t1 AT2G36380 27.717 552 338 15 35 554 850 1372 2.33e-50 189
MS.gene032307.t1 AT2G36380 26.418 564 343 19 54 560 179 727 1.05e-41 163
MS.gene032307.t1 AT5G60740 38.436 307 172 5 1 304 464 756 4.31e-48 182
MS.gene032307.t1 AT2G28070 26.032 630 411 18 42 634 105 716 1.06e-46 176
MS.gene032307.t1 AT2G28070 26.032 630 411 18 42 634 105 716 1.06e-46 176
MS.gene032307.t1 AT1G15520 29.498 478 301 14 4 462 794 1254 9.57e-46 175
MS.gene032307.t1 AT1G15520 24.602 565 353 17 65 570 168 718 1.01e-37 150
MS.gene032307.t1 AT5G58270 34.375 192 110 7 63 247 491 673 2.39e-17 86.7
MS.gene032307.t1 AT3G28390 31.905 210 123 9 74 274 1005 1203 5.06e-17 85.9
MS.gene032307.t1 AT3G28390 28.319 226 146 8 63 282 361 576 2.60e-13 73.9
MS.gene032307.t1 AT3G28415 33.333 210 120 10 74 274 1001 1199 1.81e-16 84.3
MS.gene032307.t1 AT3G28415 29.646 226 143 9 63 282 352 567 3.41e-12 70.5
MS.gene032307.t1 AT3G28415 33.333 210 120 10 74 274 1009 1207 1.95e-16 84.0
MS.gene032307.t1 AT3G28415 29.646 226 143 9 63 282 360 575 3.59e-12 70.5
MS.gene032307.t1 AT3G28380 31.222 221 136 9 65 278 1011 1222 3.22e-16 83.6
MS.gene032307.t1 AT3G28380 29.381 194 123 6 63 250 373 558 2.27e-13 74.3
MS.gene032307.t1 AT3G28360 32.367 207 126 8 65 265 997 1195 4.85e-16 82.8
MS.gene032307.t1 AT5G39040 31.937 191 119 7 65 250 412 596 2.59e-15 80.1
MS.gene032307.t1 AT4G28620 32.461 191 115 6 63 247 451 633 5.54e-15 79.0
MS.gene032307.t1 AT5G61730 28.194 227 133 8 32 246 505 713 5.68e-15 79.3
MS.gene032307.t1 AT5G61730 28.194 227 133 8 32 246 515 723 6.01e-15 79.3
MS.gene032307.t1 AT5G61690 26.316 247 161 7 10 246 487 722 6.13e-15 79.3
MS.gene032307.t1 AT5G61700 29.032 186 121 4 64 246 613 790 7.58e-15 79.0
MS.gene032307.t1 AT3G47780 30.000 190 114 7 64 246 631 808 8.07e-15 78.6
MS.gene032307.t1 AT3G47730 28.182 220 142 5 32 246 513 721 8.48e-15 78.6
MS.gene032307.t1 AT3G28345 32.240 183 112 6 74 250 1020 1196 1.02e-14 78.6
MS.gene032307.t1 AT3G28345 29.204 226 144 8 63 282 373 588 1.95e-13 74.3
MS.gene032307.t1 AT5G61690 25.506 247 162 7 10 246 487 721 2.08e-14 77.4
MS.gene032307.t1 AT5G61700 29.885 174 108 4 64 234 613 775 3.00e-14 76.6
MS.gene032307.t1 AT5G61700 29.885 174 108 4 64 234 613 775 3.00e-14 76.6
MS.gene032307.t1 AT4G28630 30.890 191 118 6 63 247 449 631 3.25e-14 76.6
MS.gene032307.t1 AT3G47750 28.042 189 119 6 64 246 633 810 3.50e-14 76.6
MS.gene032307.t1 AT1G27940 30.288 208 129 6 74 275 815 1012 8.63e-14 75.5
MS.gene032307.t1 AT1G27940 29.858 211 130 9 74 277 182 381 2.83e-11 67.4
MS.gene032307.t1 AT1G27940 30.288 208 129 6 74 275 1029 1226 9.56e-14 75.5
MS.gene032307.t1 AT1G27940 28.436 211 133 8 74 277 396 595 3.10e-11 67.4
MS.gene032307.t1 AT5G61740 27.957 186 123 5 64 246 571 748 4.60e-13 73.2
MS.gene032307.t1 AT5G61740 27.957 186 123 5 64 246 466 643 5.14e-13 72.8
MS.gene032307.t1 AT5G61740 27.957 186 123 5 64 246 605 782 5.47e-13 72.8
MS.gene032307.t1 AT4G25960 29.688 192 121 5 65 250 1046 1229 6.42e-13 72.8
MS.gene032307.t1 AT4G25960 30.208 192 120 7 65 250 417 600 8.59e-13 72.4
MS.gene032307.t1 AT2G36910 31.606 193 114 8 66 250 385 567 8.62e-13 72.4
MS.gene032307.t1 AT1G10680 29.688 192 121 7 65 250 377 560 9.80e-13 72.0
MS.gene032307.t1 AT1G10680 32.468 154 91 4 73 220 1006 1152 2.24e-11 67.8
MS.gene032307.t1 AT4G25450 29.545 220 133 10 66 275 318 525 1.05e-12 71.2
MS.gene032307.t1 AT1G10680 29.688 192 121 7 65 250 377 560 1.07e-12 72.0
MS.gene032307.t1 AT1G10680 30.435 184 114 5 73 250 1006 1181 1.55e-12 71.6
MS.gene032307.t1 AT3G28860 30.108 186 110 7 74 250 1035 1209 1.22e-12 72.0
MS.gene032307.t1 AT3G47770 27.059 255 156 11 1 246 546 779 1.44e-12 71.6
MS.gene032307.t1 AT4G25450 26.761 284 172 12 16 275 423 694 1.59e-12 71.2
MS.gene032307.t1 AT3G47770 27.059 255 156 11 1 246 572 805 1.78e-12 71.2
MS.gene032307.t1 AT2G41700 33.562 146 85 5 78 220 509 645 1.91e-12 71.2
MS.gene032307.t1 AT2G41700 30.412 194 109 7 64 246 1429 1607 2.79e-11 67.8
MS.gene032307.t1 AT2G41700 33.562 146 85 5 78 220 579 715 2.01e-12 71.2
MS.gene032307.t1 AT2G41700 30.412 194 109 7 64 246 1471 1649 3.16e-11 67.4
MS.gene032307.t1 AT1G65410 28.879 232 133 10 63 271 96 318 2.78e-12 68.9
MS.gene032307.t1 AT3G62150 30.769 208 123 10 74 272 1077 1272 6.87e-12 69.3
MS.gene032307.t1 AT3G62150 30.769 208 123 10 74 272 1077 1272 6.87e-12 69.3
MS.gene032307.t1 AT3G62150 30.769 208 123 10 74 272 1077 1272 6.87e-12 69.3
MS.gene032307.t1 AT1G28010 28.708 209 131 8 74 275 397 594 1.41e-11 68.6
MS.gene032307.t1 AT2G47000 30.288 208 124 10 74 272 1067 1262 1.89e-11 68.2
MS.gene032307.t1 AT2G47000 30.288 208 124 10 74 272 1067 1262 1.89e-11 68.2
MS.gene032307.t1 AT2G47000 30.288 208 124 10 74 272 1067 1262 1.89e-11 68.2
MS.gene032307.t1 AT4G01830 28.495 186 115 8 74 250 776 952 6.58e-11 66.2
MS.gene032307.t1 AT4G01830 28.495 186 115 8 74 250 1010 1186 7.27e-11 66.2

Find 123 sgRNAs with CRISPR-Local

Find 176 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGATCCATGCTATAAATTT+TGG 0.113814 8.2:-47894956 None:intergenic
AATCAGTTCGTTCTTATTTA+AGG 0.119518 8.2:-47894085 None:intergenic
AGAAAATTGTGTTCAATTTA+TGG 0.120780 8.2:+47893525 MS.gene032307:CDS
CCAATGTTGAGAGGGGTTTC+TGG 0.168438 8.2:+47893401 MS.gene032307:CDS
TATTCTTCATTAATAGCTTC+TGG 0.186344 8.2:+47894567 MS.gene032307:CDS
ATTGTGATTGCCCTTCTTAC+AGG 0.221473 8.2:+47894315 MS.gene032307:CDS
GAAGGAGTTCCTTTGTATTA+TGG 0.225177 8.2:+47893641 MS.gene032307:CDS
AGCCATTGGTGCTATTATTA+TGG 0.239074 8.2:+47894853 MS.gene032307:CDS
CTTCTATTCATAATGCTAAT+AGG 0.240377 8.2:+47895142 MS.gene032307:CDS
TATATATACAAGCTCGCTTT+AGG 0.260035 8.2:+47894998 MS.gene032307:CDS
GAATCCATCTGACTTCCTTT+TGG 0.270220 8.2:+47893724 MS.gene032307:CDS
GTCTAGTGTTTCGCACTTGC+AGG 0.274138 8.2:+47894353 MS.gene032307:CDS
TTTCTGGAGGGGAAAGAAAA+AGG 0.278516 8.2:+47893417 MS.gene032307:CDS
GATGGATTCATGGTAATTTC+AGG 0.282901 8.2:-47893710 None:intergenic
GAAAATTGTGTTCAATTTAT+GGG 0.295309 8.2:+47893526 MS.gene032307:CDS
ACTTCCAGATGGACCTAAAA+TGG 0.302169 8.2:-47893093 None:intergenic
GCTAATAGGTTATAGACTTA+TGG 0.307381 8.2:+47895156 MS.gene032307:CDS
GACACATACCCATGTTCTAA+TGG 0.315944 8.2:+47895040 MS.gene032307:CDS
GGATTTGAAGACAGTGGCTT+TGG 0.321484 8.2:+47894189 MS.gene032307:CDS
ATATATTATGATAATATATA+TGG 0.325849 8.2:-47894738 None:intergenic
CTGCAATGTAATTGTGTTAG+TGG 0.326227 8.2:-47892717 None:intergenic
ATGGAATATTTCGCTGGTAT+TGG 0.333632 8.2:+47893680 MS.gene032307:CDS
ATATATACAAGCTCGCTTTA+GGG 0.336172 8.2:+47894999 MS.gene032307:CDS
ATTCTTCATTAATAGCTTCT+GGG 0.347818 8.2:+47894568 MS.gene032307:CDS
AAGACAGTGGCTTTGGGAAA+TGG 0.361492 8.2:+47894196 MS.gene032307:CDS
TATAAGAAGTTGATCACATT+AGG 0.363780 8.2:-47894779 None:intergenic
ATTGCAAGTGAGTATGGATA+TGG 0.370002 8.2:+47892664 None:intergenic
GTGAATATTGCTTTGTAGAA+AGG 0.375910 8.2:-47894599 None:intergenic
AACTATTAGGTAATCTTAGA+AGG 0.381054 8.2:-47893292 None:intergenic
TATTACTTTCTCTTCTACCT+TGG 0.389053 8.2:-47893027 None:intergenic
AAATGCAAAGATAGCATCAT+TGG 0.403342 8.2:+47893374 MS.gene032307:CDS
AGCTATTAATGAAGAATAGA+AGG 0.407850 8.2:-47894562 None:intergenic
GTTTCCATTGATAAAGCAAA+TGG 0.409005 8.2:+47895081 MS.gene032307:CDS
TCTCCCATTTGCTTTATCAA+TGG 0.413855 8.2:-47895085 None:intergenic
ATATTATATATCCTACTTGA+AGG 0.416169 8.2:-47893593 None:intergenic
AACGAATTGCTGCGACCAAC+TGG 0.424570 8.2:-47894223 None:intergenic
CCAGCATAGTTGCCTCTTGA+GGG 0.427625 8.2:-47894625 None:intergenic
AAGGAAGTCAGATGGATTCA+TGG 0.428390 8.2:-47893720 None:intergenic
GATTTGAAGACAGTGGCTTT+GGG 0.428595 8.2:+47894190 MS.gene032307:CDS
AAATCTGCAAGGGCAGCTTA+TGG 0.430023 8.2:+47895111 MS.gene032307:CDS
CTATGAATTTCACCATTGTC+AGG 0.430773 8.2:-47894165 None:intergenic
CATTAATAGCTTCTGGGCTG+TGG 0.435397 8.2:+47894574 MS.gene032307:CDS
GTCTGCCTCCTAGTGCTGTT+AGG 0.441308 8.2:-47893130 None:intergenic
ACACATACCCATGTTCTAAT+GGG 0.441550 8.2:+47895041 MS.gene032307:CDS
AGTTCCTTTGTATTATGGTA+AGG 0.441967 8.2:+47893646 MS.gene032307:CDS
TGTTTCGCACTTGCAGGATC+AGG 0.444139 8.2:+47894359 MS.gene032307:CDS
AAATCCTTCAGTAACTTTGA+AGG 0.450958 8.2:+47892769 MS.gene032307:CDS
AAGTATTATTGGCTTCCATT+TGG 0.457045 8.2:-47894133 None:intergenic
AAATCTGTCATGGCTCTACT+TGG 0.459256 8.2:+47893344 MS.gene032307:CDS
ACCAAAGTAGTCCTGTAAGA+AGG 0.465457 8.2:-47894326 None:intergenic
CCCTCAAGAGGCAACTATGC+TGG 0.466451 8.2:+47894625 MS.gene032307:CDS
GAAGAGAAAGTAATACTGAA+TGG 0.467088 8.2:+47893035 MS.gene032307:CDS
AGAACTACTTTGATGCCAAA+TGG 0.473480 8.2:+47894118 MS.gene032307:CDS
CCCTTCTTACAGGACTACTT+TGG 0.474183 8.2:+47894325 MS.gene032307:CDS
AATTCAATGAAGAAGAGCAT+TGG 0.488846 8.2:+47893203 MS.gene032307:CDS
GAAATTCGCAGGACGGAGAA+TGG 0.488898 8.2:-47894285 None:intergenic
TGATGAGAGTCTATACATTC+CGG 0.490346 8.2:-47894663 None:intergenic
GTTGAATCTAATCCCGAAGT+AGG 0.490541 8.2:-47893494 None:intergenic
CCAAAGTAGTCCTGTAAGAA+GGG 0.496381 8.2:-47894325 None:intergenic
GTTCCTTTGTATTATGGTAA+GGG 0.498936 8.2:+47893647 MS.gene032307:CDS
TTACTGAAGGATTTCTCTTG+TGG 0.500628 8.2:-47892760 None:intergenic
TGGTAAGGGTTCTGAAGCTA+TGG 0.500793 8.2:+47893661 MS.gene032307:CDS
TTCCATAATAATAGCACCAA+TGG 0.504290 8.2:-47894855 None:intergenic
GTAATACTGAATGGAGTGAC+AGG 0.513530 8.2:+47893044 MS.gene032307:CDS
GAAGCTATGGAATATTTCGC+TGG 0.517627 8.2:+47893674 MS.gene032307:CDS
TATTATGATAATATATATGG+TGG 0.517721 8.2:-47894735 None:intergenic
GTTGAGAGGGGTTTCTGGAG+GGG 0.518670 8.2:+47893406 MS.gene032307:CDS
CCAGAAACCCCTCTCAACAT+TGG 0.523514 8.2:-47893401 None:intergenic
TTTCCATTGATAAAGCAAAT+GGG 0.529699 8.2:+47895082 MS.gene032307:CDS
AAACTATAACATTGAGCAAG+AGG 0.531274 8.2:-47894814 None:intergenic
AATATTCACTTTCCCTCAAG+AGG 0.531613 8.2:+47894613 MS.gene032307:CDS
GTGGGAAGGATAAGCTCCAT+TGG 0.534024 8.2:-47894716 None:intergenic
GACAATGGTGAAATTCATAG+TGG 0.534277 8.2:+47894168 MS.gene032307:CDS
TCCAGCATAGTTGCCTCTTG+AGG 0.534450 8.2:-47894626 None:intergenic
ATGTTCCAAAATTTATAGCA+TGG 0.534590 8.2:+47894951 MS.gene032307:CDS
ATGTTGAGAGGGGTTTCTGG+AGG 0.535927 8.2:+47893404 MS.gene032307:CDS
TGTTGAGAGGGGTTTCTGGA+GGG 0.540044 8.2:+47893405 MS.gene032307:CDS
TACCATTTGCAAGATCCAAA+AGG 0.543311 8.2:-47893739 None:intergenic
TAATAATAGCACCAATGGCT+AGG 0.545109 8.2:-47894850 None:intergenic
GTTATAGTTTCACAAGGACT+AGG 0.551012 8.2:+47894827 MS.gene032307:CDS
AGACTAGGAGGAAAACTCTC+TGG 0.553271 8.2:+47893149 MS.gene032307:CDS
TCTGGAACCATAACTTACAA+TGG 0.555922 8.2:+47893167 MS.gene032307:CDS
AATACCTTCAAAGTTACTGA+AGG 0.558667 8.2:-47892773 None:intergenic
TTGGAAAACCAATGTTGAGA+GGG 0.560860 8.2:+47893393 MS.gene032307:CDS
CTCAATGTTATAGTTTCACA+AGG 0.561473 8.2:+47894821 MS.gene032307:CDS
CTTGTATATATAGTATGTGA+TGG 0.562367 8.2:-47894987 None:intergenic
TGATAATATATATGGTGGGA+AGG 0.562566 8.2:-47894730 None:intergenic
TTGGGAAATGGTCTACCAGT+TGG 0.563716 8.2:+47894208 MS.gene032307:CDS
ACAGCACTAGGAGGCAGACT+AGG 0.566272 8.2:+47893134 MS.gene032307:CDS
GAAAGAGATGCAAGACATTG+AGG 0.567371 8.2:+47892688 MS.gene032307:CDS
CATTGGATTTGTTACACAAG+AGG 0.570838 8.2:+47893220 MS.gene032307:CDS
CAATGATCTTAGAAATTCGC+AGG 0.573449 8.2:-47894296 None:intergenic
ACAACTCTCCTAACAGCACT+AGG 0.577888 8.2:+47893122 MS.gene032307:CDS
ACTATTAGGTAATCTTAGAA+GGG 0.579744 8.2:-47893291 None:intergenic
CAAGGACTAGGCCTAGCCAT+TGG 0.586382 8.2:+47894839 MS.gene032307:CDS
AATTTATGGGAGCTTGCAAG+TGG 0.590215 8.2:+47893539 MS.gene032307:CDS
AAACACTTCCCATTAGAACA+TGG 0.591695 8.2:-47895049 None:intergenic
TGGGAGAACTAAATCTGCAA+GGG 0.592978 8.2:+47895101 MS.gene032307:CDS
AGATCCAAAAGGAAGTCAGA+TGG 0.593101 8.2:-47893728 None:intergenic
CATAGTGGATTTGAAGACAG+TGG 0.593604 8.2:+47894183 MS.gene032307:CDS
TAACACAATTACATTGCAGA+AGG 0.595663 8.2:+47892721 MS.gene032307:CDS
TTATGGGAGCTTGCAAGTGG+AGG 0.606573 8.2:+47893542 MS.gene032307:CDS
ATGGGAGAACTAAATCTGCA+AGG 0.612706 8.2:+47895100 MS.gene032307:CDS
GAAGGATAAGCTCCATTGGA+AGG 0.614023 8.2:-47894712 None:intergenic
GCACTAGGAGGCAGACTAGG+AGG 0.618451 8.2:+47893137 MS.gene032307:CDS
AACACTTCCCATTAGAACAT+GGG 0.621978 8.2:-47895048 None:intergenic
CAATACATCAACCTTCAAGT+AGG 0.622273 8.2:+47893582 MS.gene032307:CDS
GATGATAGTTGACCTTCCAA+TGG 0.622656 8.2:+47894700 MS.gene032307:CDS
TGGAAAACCAATGTTGAGAG+GGG 0.623196 8.2:+47893394 MS.gene032307:CDS
GATCTTAGAAATTCGCAGGA+CGG 0.623993 8.2:-47894292 None:intergenic
ACTGAATGGAGTGACAGGAA+TGG 0.628213 8.2:+47893049 MS.gene032307:CDS
TGAGCATGCGAAATCTGTCA+TGG 0.628954 8.2:+47893334 MS.gene032307:CDS
GTGACAGGAATGGTTCAGCC+TGG 0.631154 8.2:+47893059 MS.gene032307:CDS
ATTATGATAATATATATGGT+GGG 0.632876 8.2:-47894734 None:intergenic
TCTCATCATACTTCATGTCA+AGG 0.634155 8.2:+47894678 MS.gene032307:CDS
ATTGGAAAACCAATGTTGAG+AGG 0.636677 8.2:+47893392 MS.gene032307:CDS
AAAATGGCAAGAATCTCACC+AGG 0.649598 8.2:-47893077 None:intergenic
GAACCCTTACCATAATACAA+AGG 0.654701 8.2:-47893650 None:intergenic
CTTGATGAAAATCCTGACAA+TGG 0.681771 8.2:+47894153 MS.gene032307:CDS
ACTCTCCTAACAGCACTAGG+AGG 0.684785 8.2:+47893125 MS.gene032307:CDS
GTTTCTGTAACAGTCAAGTG+AGG 0.686147 8.2:-47893254 None:intergenic
TTCGGGATTAGATTCAACAA+CGG 0.706599 8.2:+47893499 MS.gene032307:CDS
TTACACTGATCAATCAAACG+AGG 0.770177 8.2:+47894056 MS.gene032307:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTAAAAAACATAGTT+GGG - chr8.2:47893963-47893982 None:intergenic 10.0%
!!! TAAATTTTAAAAAACATAGT+TGG - chr8.2:47893964-47893983 None:intergenic 10.0%
!! ATTATGATAATATATATGGT+GGG - chr8.2:47894737-47894756 None:intergenic 15.0%
!! TATTATGATAATATATATGG+TGG - chr8.2:47894738-47894757 None:intergenic 15.0%
!!! ATCATAATATATTTTATGAC+AGG + chr8.2:47894749-47894768 MS.gene032307:CDS 15.0%
!!! CGAATTATTTTTCATATAAA+TGG - chr8.2:47893834-47893853 None:intergenic 15.0%
!!! TCATAATATATTTTATGACA+GGG + chr8.2:47894750-47894769 MS.gene032307:CDS 15.0%
!! AGAAAATTGTGTTCAATTTA+TGG + chr8.2:47893525-47893544 MS.gene032307:CDS 20.0%
!! AGGTTATAATAATAATCATG+AGG - chr8.2:47892827-47892846 None:intergenic 20.0%
!! ATATTATATATCCTACTTGA+AGG - chr8.2:47893596-47893615 None:intergenic 20.0%
!! GAAAATTGTGTTCAATTTAT+GGG + chr8.2:47893526-47893545 MS.gene032307:CDS 20.0%
!! TTTGCAAAATAAATAGAACA+AGG - chr8.2:47893772-47893791 None:intergenic 20.0%
!!! AGATTTTCAATTCATGAAAA+AGG + chr8.2:47894387-47894406 MS.gene032307:intron 20.0%
!!! TGATTTTATATACAACATCA+TGG - chr8.2:47892971-47892990 None:intergenic 20.0%
! AAACATACATGATTCATGAA+TGG + chr8.2:47894489-47894508 MS.gene032307:intron 25.0%
! AACTATTAGGTAATCTTAGA+AGG - chr8.2:47893295-47893314 None:intergenic 25.0%
! ACTATTAGGTAATCTTAGAA+GGG - chr8.2:47893294-47893313 None:intergenic 25.0%
! AGCTATTAATGAAGAATAGA+AGG - chr8.2:47894565-47894584 None:intergenic 25.0%
! ATGTTCCAAAATTTATAGCA+TGG + chr8.2:47894951-47894970 MS.gene032307:CDS 25.0%
! ATTACTTGAGAAAAAAACCA+AGG + chr8.2:47893010-47893029 MS.gene032307:CDS 25.0%
! ATTCTTCATTAATAGCTTCT+GGG + chr8.2:47894568-47894587 MS.gene032307:CDS 25.0%
! CTTCTATTCATAATGCTAAT+AGG + chr8.2:47895142-47895161 MS.gene032307:CDS 25.0%
! CTTGTATATATAGTATGTGA+TGG - chr8.2:47894990-47895009 None:intergenic 25.0%
! TAGTTCAATTGTGTAGAATT+TGG + chr8.2:47894450-47894469 MS.gene032307:intron 25.0%
! TATTCTTCATTAATAGCTTC+TGG + chr8.2:47894567-47894586 MS.gene032307:CDS 25.0%
! TCATCTAAAAACAACAAACT+TGG - chr8.2:47893473-47893492 None:intergenic 25.0%
! TTAATCCATGCAAATTAAAG+AGG - chr8.2:47892851-47892870 None:intergenic 25.0%
! TTTCCATTGATAAAGCAAAT+GGG + chr8.2:47895082-47895101 MS.gene032307:CDS 25.0%
!! AATCAGTTCGTTCTTATTTA+AGG - chr8.2:47894088-47894107 None:intergenic 25.0%
!! ATGCTCAATTTTCTCTTTTT+TGG - chr8.2:47893321-47893340 None:intergenic 25.0%
!! CTAGTTACTATGTTTTATGT+TGG + chr8.2:47894008-47894027 MS.gene032307:intron 25.0%
!! GATTTTTCCATTGTAAGTTA+TGG - chr8.2:47893177-47893196 None:intergenic 25.0%
!! GGATTTTCATCAAGTATTAT+TGG - chr8.2:47894147-47894166 None:intergenic 25.0%
!! TATAAGAAGTTGATCACATT+AGG - chr8.2:47894782-47894801 None:intergenic 25.0%
!! TTGATCCATGCTATAAATTT+TGG - chr8.2:47894959-47894978 None:intergenic 25.0%
!!! TCTTTTTTGGTGAAACTATT+AGG - chr8.2:47893308-47893327 None:intergenic 25.0%
AAACTATAACATTGAGCAAG+AGG - chr8.2:47894817-47894836 None:intergenic 30.0%
AAATCAACAAGACCAAAAAG+TGG + chr8.2:47892985-47893004 MS.gene032307:CDS 30.0%
AAATCCTTCAGTAACTTTGA+AGG + chr8.2:47892769-47892788 MS.gene032307:CDS 30.0%
AAATGCAAAGATAGCATCAT+TGG + chr8.2:47893374-47893393 MS.gene032307:CDS 30.0%
AATACCTTCAAAGTTACTGA+AGG - chr8.2:47892776-47892795 None:intergenic 30.0%
ACTAAACAGTGAGGAAAAAA+AGG - chr8.2:47892887-47892906 None:intergenic 30.0%
ACTATTAGAACTAAACAGTG+AGG - chr8.2:47892896-47892915 None:intergenic 30.0%
AGTTCCTTTGTATTATGGTA+AGG + chr8.2:47893646-47893665 MS.gene032307:CDS 30.0%
ATATATACAAGCTCGCTTTA+GGG + chr8.2:47894999-47895018 MS.gene032307:CDS 30.0%
ATTCTTATGTGCATGTAGAT+TGG + chr8.2:47894539-47894558 MS.gene032307:intron 30.0%
CTAAACAGTGAGGAAAAAAA+GGG - chr8.2:47892886-47892905 None:intergenic 30.0%
CTACACAATTGAACTAAATC+TGG - chr8.2:47894446-47894465 None:intergenic 30.0%
CTCAATGTTATAGTTTCACA+AGG + chr8.2:47894821-47894840 MS.gene032307:CDS 30.0%
GAAGAGAAAGTAATACTGAA+TGG + chr8.2:47893035-47893054 MS.gene032307:CDS 30.0%
GCTAATAGGTTATAGACTTA+TGG + chr8.2:47895156-47895175 MS.gene032307:CDS 30.0%
GTGAATATTGCTTTGTAGAA+AGG - chr8.2:47894602-47894621 None:intergenic 30.0%
GTTCCTTTGTATTATGGTAA+GGG + chr8.2:47893647-47893666 MS.gene032307:CDS 30.0%
GTTTCCATTGATAAAGCAAA+TGG + chr8.2:47895081-47895100 MS.gene032307:CDS 30.0%
TAACACAATTACATTGCAGA+AGG + chr8.2:47892721-47892740 MS.gene032307:CDS 30.0%
TATATATACAAGCTCGCTTT+AGG + chr8.2:47894998-47895017 MS.gene032307:CDS 30.0%
TATTACTTTCTCTTCTACCT+TGG - chr8.2:47893030-47893049 None:intergenic 30.0%
TGCACATAAGAATTGAGTTA+TGG - chr8.2:47894532-47894551 None:intergenic 30.0%
TTCCATAATAATAGCACCAA+TGG - chr8.2:47894858-47894877 None:intergenic 30.0%
! AATTCAATGAAGAAGAGCAT+TGG + chr8.2:47893203-47893222 MS.gene032307:CDS 30.0%
! ATTTTGCTCTTATGAGGATT+GGG + chr8.2:47895182-47895201 MS.gene032307:CDS 30.0%
! GTTCATGTTTTCTCTCTTTT+AGG - chr8.2:47894266-47894285 None:intergenic 30.0%
! TATTTTGCTCTTATGAGGAT+TGG + chr8.2:47895181-47895200 MS.gene032307:CDS 30.0%
! TGATAATATATATGGTGGGA+AGG - chr8.2:47894733-47894752 None:intergenic 30.0%
! TTTTTAGATGAACCTACTTC+GGG + chr8.2:47893482-47893501 MS.gene032307:CDS 30.0%
!! AAGTATTATTGGCTTCCATT+TGG - chr8.2:47894136-47894155 None:intergenic 30.0%
!! ACTGTTTTGCTTTTATCAGA+AGG + chr8.2:47893623-47893642 MS.gene032307:CDS 30.0%
!! CTCAAGTAATTTCCACTTTT+TGG - chr8.2:47893000-47893019 None:intergenic 30.0%
!! GTTTTTAGATGAACCTACTT+CGG + chr8.2:47893481-47893500 MS.gene032307:CDS 30.0%
AAACACTTCCCATTAGAACA+TGG - chr8.2:47895052-47895071 None:intergenic 35.0%
AACACTTCCCATTAGAACAT+GGG - chr8.2:47895051-47895070 None:intergenic 35.0%
AATATTCACTTTCCCTCAAG+AGG + chr8.2:47894613-47894632 MS.gene032307:CDS 35.0%
ACACATACCCATGTTCTAAT+GGG + chr8.2:47895041-47895060 MS.gene032307:CDS 35.0%
ACATGATTCATGAATGGCAA+AGG + chr8.2:47894495-47894514 MS.gene032307:intron 35.0%
AGAACTACTTTGATGCCAAA+TGG + chr8.2:47894118-47894137 MS.gene032307:CDS 35.0%
ATGGAATATTTCGCTGGTAT+TGG + chr8.2:47893680-47893699 MS.gene032307:CDS 35.0%
ATTGGAAAACCAATGTTGAG+AGG + chr8.2:47893392-47893411 MS.gene032307:CDS 35.0%
CAAAAATCAGCAATCACACT+TGG + chr8.2:47894878-47894897 MS.gene032307:CDS 35.0%
CAATACATCAACCTTCAAGT+AGG + chr8.2:47893582-47893601 MS.gene032307:CDS 35.0%
CAATGATCTTAGAAATTCGC+AGG - chr8.2:47894299-47894318 None:intergenic 35.0%
CTATGAATTTCACCATTGTC+AGG - chr8.2:47894168-47894187 None:intergenic 35.0%
CTGCAATGTAATTGTGTTAG+TGG - chr8.2:47892720-47892739 None:intergenic 35.0%
CTGGAAAAAGAAAGATCTTC+CGG + chr8.2:47894644-47894663 MS.gene032307:CDS 35.0%
CTTGATGAAAATCCTGACAA+TGG + chr8.2:47894153-47894172 MS.gene032307:CDS 35.0%
GAAAGAAAAAGGGTAAGCAT+AGG + chr8.2:47893428-47893447 MS.gene032307:CDS 35.0%
GAACCCTTACCATAATACAA+AGG - chr8.2:47893653-47893672 None:intergenic 35.0%
GAAGGAGTTCCTTTGTATTA+TGG + chr8.2:47893641-47893660 MS.gene032307:CDS 35.0%
GACAATGGTGAAATTCATAG+TGG + chr8.2:47894168-47894187 MS.gene032307:CDS 35.0%
GTTATAGTTTCACAAGGACT+AGG + chr8.2:47894827-47894846 MS.gene032307:CDS 35.0%
TAATAATAGCACCAATGGCT+AGG - chr8.2:47894853-47894872 None:intergenic 35.0%
TACCATTTGCAAGATCCAAA+AGG - chr8.2:47893742-47893761 None:intergenic 35.0%
TCCATGCAAATTAAAGAGGA+AGG - chr8.2:47892847-47892866 None:intergenic 35.0%
TCTCATCATACTTCATGTCA+AGG + chr8.2:47894678-47894697 MS.gene032307:CDS 35.0%
TCTCCCATTTGCTTTATCAA+TGG - chr8.2:47895088-47895107 None:intergenic 35.0%
TGAACTAAATCTGGTGTCTT+AGG - chr8.2:47894437-47894456 None:intergenic 35.0%
TGATGAGAGTCTATACATTC+CGG - chr8.2:47894666-47894685 None:intergenic 35.0%
TTACACTGATCAATCAAACG+AGG + chr8.2:47894056-47894075 MS.gene032307:CDS 35.0%
TTACTGAAGGATTTCTCTTG+TGG - chr8.2:47892763-47892782 None:intergenic 35.0%
TTCGGGATTAGATTCAACAA+CGG + chr8.2:47893499-47893518 MS.gene032307:CDS 35.0%
TTGGAAAACCAATGTTGAGA+GGG + chr8.2:47893393-47893412 MS.gene032307:CDS 35.0%
! ATGTTTTATGTTGGCCACAT+CGG + chr8.2:47894017-47894036 MS.gene032307:intron 35.0%
! GATGGATTCATGGTAATTTC+AGG - chr8.2:47893713-47893732 None:intergenic 35.0%
! TCTGGAACCATAACTTACAA+TGG + chr8.2:47893167-47893186 MS.gene032307:CDS 35.0%
! TTCCTTTTGGATCTTGCAAA+TGG + chr8.2:47893737-47893756 MS.gene032307:CDS 35.0%
! TTTTGCTCTTATGAGGATTG+GGG + chr8.2:47895183-47895202 MS.gene032307:CDS 35.0%
!! ACCTTCCTCTTTAATTTGCA+TGG + chr8.2:47892843-47892862 MS.gene032307:intron 35.0%
!! AGCCATTGGTGCTATTATTA+TGG + chr8.2:47894853-47894872 MS.gene032307:CDS 35.0%
!! CATTGGATTTGTTACACAAG+AGG + chr8.2:47893220-47893239 MS.gene032307:CDS 35.0%
!!! TGGCTTATTTTGCTCTTATG+AGG + chr8.2:47895176-47895195 MS.gene032307:CDS 35.0%
AAAATGGCAAGAATCTCACC+AGG - chr8.2:47893080-47893099 None:intergenic 40.0%
AATTTATGGGAGCTTGCAAG+TGG + chr8.2:47893539-47893558 MS.gene032307:CDS 40.0%
ACCAAAGTAGTCCTGTAAGA+AGG - chr8.2:47894329-47894348 None:intergenic 40.0%
ACTTCCAGATGGACCTAAAA+TGG - chr8.2:47893096-47893115 None:intergenic 40.0%
AGATCCAAAAGGAAGTCAGA+TGG - chr8.2:47893731-47893750 None:intergenic 40.0%
ATGGGAGAACTAAATCTGCA+AGG + chr8.2:47895100-47895119 MS.gene032307:CDS 40.0%
ATTGTGATTGCCCTTCTTAC+AGG + chr8.2:47894315-47894334 MS.gene032307:CDS 40.0%
CCAAAGTAGTCCTGTAAGAA+GGG - chr8.2:47894328-47894347 None:intergenic 40.0%
GAAAGAGATGCAAGACATTG+AGG + chr8.2:47892688-47892707 MS.gene032307:CDS 40.0%
GAAGCTATGGAATATTTCGC+TGG + chr8.2:47893674-47893693 MS.gene032307:CDS 40.0%
GACACATACCCATGTTCTAA+TGG + chr8.2:47895040-47895059 MS.gene032307:CDS 40.0%
GATCTTAGAAATTCGCAGGA+CGG - chr8.2:47894295-47894314 None:intergenic 40.0%
GATGATAGTTGACCTTCCAA+TGG + chr8.2:47894700-47894719 MS.gene032307:CDS 40.0%
GATTTGAAGACAGTGGCTTT+GGG + chr8.2:47894190-47894209 MS.gene032307:CDS 40.0%
GTAATACTGAATGGAGTGAC+AGG + chr8.2:47893044-47893063 MS.gene032307:CDS 40.0%
GTTGAATCTAATCCCGAAGT+AGG - chr8.2:47893497-47893516 None:intergenic 40.0%
GTTTCTGTAACAGTCAAGTG+AGG - chr8.2:47893257-47893276 None:intergenic 40.0%
TACAACATCATGGAACTGTG+AGG - chr8.2:47892961-47892980 None:intergenic 40.0%
TGGAAAACCAATGTTGAGAG+GGG + chr8.2:47893394-47893413 MS.gene032307:CDS 40.0%
TGGGAGAACTAAATCTGCAA+GGG + chr8.2:47895101-47895120 MS.gene032307:CDS 40.0%
! AAATCTGTCATGGCTCTACT+TGG + chr8.2:47893344-47893363 MS.gene032307:CDS 40.0%
! AAGGAAGTCAGATGGATTCA+TGG - chr8.2:47893723-47893742 None:intergenic 40.0%
! GAATCCATCTGACTTCCTTT+TGG + chr8.2:47893724-47893743 MS.gene032307:CDS 40.0%
! TTCTGGAGGGGAAAGAAAAA+GGG + chr8.2:47893418-47893437 MS.gene032307:CDS 40.0%
! TTTCTGGAGGGGAAAGAAAA+AGG + chr8.2:47893417-47893436 MS.gene032307:CDS 40.0%
!! ATTTTAGGTCCATCTGGAAG+TGG + chr8.2:47893095-47893114 MS.gene032307:CDS 40.0%
!! CATAGTGGATTTGAAGACAG+TGG + chr8.2:47894183-47894202 MS.gene032307:CDS 40.0%
!! GTTGTTTTACCACTTCCAGA+TGG - chr8.2:47893107-47893126 None:intergenic 40.0%
!!! CATCTTGCTTAGTTTTGTGC+TGG + chr8.2:47894907-47894926 MS.gene032307:CDS 40.0%
!!! CTTAGTTTTGTGCTGGTTGT+TGG + chr8.2:47894914-47894933 MS.gene032307:CDS 40.0%
!!! GGTGAGATTCTTGCCATTTT+AGG + chr8.2:47893080-47893099 MS.gene032307:CDS 40.0%
!!! TCCTGCAATTTTTTCCGATG+TGG - chr8.2:47894034-47894053 None:intergenic 40.0%
AAATCTGCAAGGGCAGCTTA+TGG + chr8.2:47895111-47895130 MS.gene032307:CDS 45.0%
ACAACTCTCCTAACAGCACT+AGG + chr8.2:47893122-47893141 MS.gene032307:CDS 45.0%
ACTGAATGGAGTGACAGGAA+TGG + chr8.2:47893049-47893068 MS.gene032307:CDS 45.0%
AGACTAGGAGGAAAACTCTC+TGG + chr8.2:47893149-47893168 MS.gene032307:CDS 45.0%
CATTAATAGCTTCTGGGCTG+TGG + chr8.2:47894574-47894593 MS.gene032307:CDS 45.0%
CCCTTCTTACAGGACTACTT+TGG + chr8.2:47894325-47894344 MS.gene032307:CDS 45.0%
GAAGGATAAGCTCCATTGGA+AGG - chr8.2:47894715-47894734 None:intergenic 45.0%
GCCACATCGGAAAAAATTGC+AGG + chr8.2:47894030-47894049 MS.gene032307:intron 45.0%
GGATTTGAAGACAGTGGCTT+TGG + chr8.2:47894189-47894208 MS.gene032307:CDS 45.0%
TGAGCATGCGAAATCTGTCA+TGG + chr8.2:47893334-47893353 MS.gene032307:CDS 45.0%
TTGGGAAATGGTCTACCAGT+TGG + chr8.2:47894208-47894227 MS.gene032307:CDS 45.0%
!! AAGACAGTGGCTTTGGGAAA+TGG + chr8.2:47894196-47894215 MS.gene032307:CDS 45.0%
!! TGGTAAGGGTTCTGAAGCTA+TGG + chr8.2:47893661-47893680 MS.gene032307:CDS 45.0%
!!! CTTGCCATTTTAGGTCCATC+TGG + chr8.2:47893089-47893108 MS.gene032307:CDS 45.0%
!! ATATATTATGATAATATATA+TGG - chr8.2:47894741-47894760 None:intergenic 5.0%
AACGAATTGCTGCGACCAAC+TGG - chr8.2:47894226-47894245 None:intergenic 50.0%
ACTCTCCTAACAGCACTAGG+AGG + chr8.2:47893125-47893144 MS.gene032307:CDS 50.0%
CCAATGTTGAGAGGGGTTTC+TGG + chr8.2:47893401-47893420 MS.gene032307:CDS 50.0%
CCAGAAACCCCTCTCAACAT+TGG - chr8.2:47893404-47893423 None:intergenic 50.0%
CCAGCATAGTTGCCTCTTGA+GGG - chr8.2:47894628-47894647 None:intergenic 50.0%
GAAATTCGCAGGACGGAGAA+TGG - chr8.2:47894288-47894307 None:intergenic 50.0%
GTCTAGTGTTTCGCACTTGC+AGG + chr8.2:47894353-47894372 MS.gene032307:CDS 50.0%
GTGGGAAGGATAAGCTCCAT+TGG - chr8.2:47894719-47894738 None:intergenic 50.0%
TCCAGCATAGTTGCCTCTTG+AGG - chr8.2:47894629-47894648 None:intergenic 50.0%
TGTTTCGCACTTGCAGGATC+AGG + chr8.2:47894359-47894378 MS.gene032307:CDS 50.0%
TTATGGGAGCTTGCAAGTGG+AGG + chr8.2:47893542-47893561 MS.gene032307:CDS 50.0%
! ATGTTGAGAGGGGTTTCTGG+AGG + chr8.2:47893404-47893423 MS.gene032307:CDS 50.0%
! TGTTGAGAGGGGTTTCTGGA+GGG + chr8.2:47893405-47893424 MS.gene032307:CDS 50.0%
ACAGCACTAGGAGGCAGACT+AGG + chr8.2:47893134-47893153 MS.gene032307:CDS 55.0%
CAAGGACTAGGCCTAGCCAT+TGG + chr8.2:47894839-47894858 MS.gene032307:CDS 55.0%
CCCTCAAGAGGCAACTATGC+TGG + chr8.2:47894625-47894644 MS.gene032307:CDS 55.0%
GTGACAGGAATGGTTCAGCC+TGG + chr8.2:47893059-47893078 MS.gene032307:CDS 55.0%
! GTCTGCCTCCTAGTGCTGTT+AGG - chr8.2:47893133-47893152 None:intergenic 55.0%
! GTTGAGAGGGGTTTCTGGAG+GGG + chr8.2:47893406-47893425 MS.gene032307:CDS 55.0%
GCACTAGGAGGCAGACTAGG+AGG + chr8.2:47893137-47893156 MS.gene032307:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 47892677 47895228 47892677 ID=MS.gene032307
chr8.2 mRNA 47892677 47895228 47892677 ID=MS.gene032307.t1;Parent=MS.gene032307
chr8.2 exon 47892677 47892790 47892677 ID=MS.gene032307.t1.exon1;Parent=MS.gene032307.t1
chr8.2 CDS 47892677 47892790 47892677 ID=cds.MS.gene032307.t1;Parent=MS.gene032307.t1
chr8.2 exon 47892966 47893758 47892966 ID=MS.gene032307.t1.exon2;Parent=MS.gene032307.t1
chr8.2 CDS 47892966 47893758 47892966 ID=cds.MS.gene032307.t1;Parent=MS.gene032307.t1
chr8.2 exon 47894052 47894380 47894052 ID=MS.gene032307.t1.exon3;Parent=MS.gene032307.t1
chr8.2 CDS 47894052 47894380 47894052 ID=cds.MS.gene032307.t1;Parent=MS.gene032307.t1
chr8.2 exon 47894557 47895228 47894557 ID=MS.gene032307.t1.exon4;Parent=MS.gene032307.t1
chr8.2 CDS 47894557 47895228 47894557 ID=cds.MS.gene032307.t1;Parent=MS.gene032307.t1
Gene Sequence

>MS.gene032307

ATGGATATGGAGAAAGAGATGCAAGACATTGAGGCTCAAACCACTAACACAATTACATTGCAGAAGGAAGCATCTAACATCTTCCACAAGAGAAATCCTTCAGTAACTTTGAAGGTATTTTGAGTTAAAATTAAAAGAAATCATTTTCCTCATGATTATTATTATAACCTTCCTCTTTAATTTGCATGGATTAATGTTGAAATAATCCCTTTTTTTCCTCACTGTTTAGTTCTAATAGTAATCTTTGTAATATTCAATTAAATATATTTCTGACATTGTTTCCTCACAGTTCCATGATGTTGTATATAAAATCAACAAGACCAAAAAGTGGAAATTACTTGAGAAAAAAACCAAGGTAGAAGAGAAAGTAATACTGAATGGAGTGACAGGAATGGTTCAGCCTGGTGAGATTCTTGCCATTTTAGGTCCATCTGGAAGTGGTAAAACAACTCTCCTAACAGCACTAGGAGGCAGACTAGGAGGAAAACTCTCTGGAACCATAACTTACAATGGAAAAATCTTTTCAAATTCAATGAAGAAGAGCATTGGATTTGTTACACAAGAGGATATTCTCTATCCTCACTTGACTGTTACAGAAACTCTAGTGTTTACTTCCCTTCTAAGATTACCTAATAGTTTCACCAAAAAAGAGAAAATTGAGCATGCGAAATCTGTCATGGCTCTACTTGGTTTAACAAAATGCAAAGATAGCATCATTGGAAAACCAATGTTGAGAGGGGTTTCTGGAGGGGAAAGAAAAAGGGTAAGCATAGGACAAGAGATGCTTATAAATCCAAGTTTGTTGTTTTTAGATGAACCTACTTCGGGATTAGATTCAACAACGGCGCAGAAAATTGTGTTCAATTTATGGGAGCTTGCAAGTGGAGGAAGAACATTTGTGATGACAATACATCAACCTTCAAGTAGGATATATAATATGTTTCACACTGTTTTGCTTTTATCAGAAGGAGTTCCTTTGTATTATGGTAAGGGTTCTGAAGCTATGGAATATTTCGCTGGTATTGGATATGAACCTGAAATTACCATGAATCCATCTGACTTCCTTTTGGATCTTGCAAATGGTATGTTGCTCCTTGTTCTATTTATTTTGCAAAGTTTCAGCATTCGTCGTTTTTATGATTCAATACACACTTCCATTTATATGAAAAATAATTCGAAAAAAGAATTTTTCTTTTTAGTACTTGCATATATTTTGATTCATTTTTTTAATATTTATTTTTTAAAAAAAAGTAATGTAAAGACATCATTGTGATTATTCAATTCCCAACTATGTTTTTTAAAATTTAATGTAAAGACATCATTGTGATTATCTAGTTACTATGTTTTATGTTGGCCACATCGGAAAAAATTGCAGGAGTTTACACTGATCAATCAAACGAGGATCATGCCTTAAATAAGAACGAACTGATTTCTGCATATAAGAACTACTTTGATGCCAAATGGAAGCCAATAATACTTGATGAAAATCCTGACAATGGTGAAATTCATAGTGGATTTGAAGACAGTGGCTTTGGGAAATGGTCTACCAGTTGGTCGCAGCAATTCGTTGTGCTGTTAAAAAGAGACCTAAAAGAGAGAAAACATGAACCATTCTCCGTCCTGCGAATTTCTAAGATCATTGTGATTGCCCTTCTTACAGGACTACTTTGGTATAAGTCTAGTGTTTCGCACTTGCAGGATCAGGTAATAAGATTTTCAATTCATGAAAAAGGAAAAATGAAAATAAGTTTTGTGTTCCTAAGACACCAGATTTAGTTCAATTGTGTAGAATTTGGCTTATAAAATATTAGCAAACATACATGATTCATGAATGGCAAAGGATGATAGTTGACCATAACTCAATTCTTATGTGCATGTAGATTGGCCTTCTATTCTTCATTAATAGCTTCTGGGCTGTGGTACCTTTCTACAAAGCAATATTCACTTTCCCTCAAGAGGCAACTATGCTGGAAAAAGAAAGATCTTCCGGAATGTATAGACTCTCATCATACTTCATGTCAAGGATGATAGTTGACCTTCCAATGGAGCTTATCCTTCCCACCATATATATTATCATAATATATTTTATGACAGGGTTGAAACCTAATGTGATCAACTTCTTATACACTTTGTTTAGCCTCTTGCTCAATGTTATAGTTTCACAAGGACTAGGCCTAGCCATTGGTGCTATTATTATGGAACAAAAATCAGCAATCACACTTGGCTCAATCATCTTGCTTAGTTTTGTGCTGGTTGTTGGATTCTATGTTCAACATGTTCCAAAATTTATAGCATGGATCAAGTACATTTCCATCACATACTATATATACAAGCTCGCTTTAGGGTCTCAGTATGACATTAATGACACATACCCATGTTCTAATGGGAAGTGTTTGATTGCTGAGTTTCCATTGATAAAGCAAATGGGAGAACTAAATCTGCAAGGGCAGCTTATGGCAGTATTTCTTCTATTCATAATGCTAATAGGTTATAGACTTATGGCTTATTTTGCTCTTATGAGGATTGGGGTGACAAAGAAGATTTCTATCTGA
Protein sequence

>MS.gene032307.t1

MDMEKEMQDIEAQTTNTITLQKEASNIFHKRNPSVTLKFHDVVYKINKTKKWKLLEKKTKVEEKVILNGVTGMVQPGEILAILGPSGSGKTTLLTALGGRLGGKLSGTITYNGKIFSNSMKKSIGFVTQEDILYPHLTVTETLVFTSLLRLPNSFTKKEKIEHAKSVMALLGLTKCKDSIIGKPMLRGVSGGERKRVSIGQEMLINPSLLFLDEPTSGLDSTTAQKIVFNLWELASGGRTFVMTIHQPSSRIYNMFHTVLLLSEGVPLYYGKGSEAMEYFAGIGYEPEITMNPSDFLLDLANGVYTDQSNEDHALNKNELISAYKNYFDAKWKPIILDENPDNGEIHSGFEDSGFGKWSTSWSQQFVVLLKRDLKERKHEPFSVLRISKIIVIALLTGLLWYKSSVSHLQDQIGLLFFINSFWAVVPFYKAIFTFPQEATMLEKERSSGMYRLSSYFMSRMIVDLPMELILPTIYIIIIYFMTGLKPNVINFLYTLFSLLLNVIVSQGLGLAIGAIIMEQKSAITLGSIILLSFVLVVGFYVQHVPKFIAWIKYISITYYIYKLALGSQYDINDTYPCSNGKCLIAEFPLIKQMGELNLQGQLMAVFLLFIMLIGYRLMAYFALMRIGVTKKISI