Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033998.t1 | XP_013454728.1 | 99.5 | 396 | 2 | 0 | 1 | 396 | 1 | 396 | 2.00E-229 | 804.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033998.t1 | Q9C969 | 68.6 | 395 | 123 | 1 | 1 | 395 | 1 | 394 | 1.8e-167 | 590.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033998.t1 | A0A072UG88 | 99.5 | 396 | 2 | 0 | 1 | 396 | 1 | 396 | 1.4e-229 | 804.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene033998 | MS.gene028573 | PPI |
| MS.gene033998 | MS.gene40160 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033998.t1 | MTR_4g011820 | 99.495 | 396 | 2 | 0 | 1 | 396 | 1 | 396 | 0.0 | 815 |
| MS.gene033998.t1 | MTR_7g106830 | 30.028 | 353 | 220 | 8 | 62 | 394 | 128 | 473 | 2.62e-42 | 154 |
| MS.gene033998.t1 | MTR_8g091280 | 29.661 | 354 | 220 | 10 | 62 | 394 | 130 | 475 | 5.78e-40 | 148 |
| MS.gene033998.t1 | MTR_1807s0010 | 27.507 | 349 | 220 | 9 | 62 | 388 | 62 | 399 | 3.31e-23 | 100 |
| MS.gene033998.t1 | MTR_3g072670 | 25.062 | 403 | 261 | 17 | 6 | 387 | 63 | 445 | 1.04e-20 | 94.0 |
| MS.gene033998.t1 | MTR_3g072680 | 25.185 | 405 | 258 | 17 | 6 | 387 | 20 | 402 | 1.45e-20 | 93.2 |
| MS.gene033998.t1 | MTR_1g087760 | 25.070 | 359 | 245 | 9 | 5 | 353 | 3 | 347 | 2.23e-20 | 92.4 |
| MS.gene033998.t1 | MTR_8g101750 | 22.059 | 340 | 220 | 12 | 75 | 382 | 97 | 423 | 2.33e-15 | 77.8 |
| MS.gene033998.t1 | MTR_2g008430 | 29.080 | 337 | 213 | 14 | 64 | 382 | 108 | 436 | 3.96e-15 | 77.0 |
| MS.gene033998.t1 | MTR_6g091760 | 23.512 | 336 | 220 | 12 | 75 | 382 | 105 | 431 | 6.38e-15 | 76.3 |
| MS.gene033998.t1 | MTR_8g098930 | 22.599 | 354 | 234 | 14 | 61 | 382 | 87 | 432 | 9.46e-15 | 76.3 |
| MS.gene033998.t1 | MTR_3g103550 | 22.727 | 352 | 231 | 12 | 64 | 382 | 81 | 424 | 1.56e-14 | 75.5 |
| MS.gene033998.t1 | MTR_4g092620 | 25.333 | 300 | 186 | 10 | 62 | 336 | 125 | 411 | 9.31e-13 | 69.7 |
| MS.gene033998.t1 | MTR_8g023140 | 25.073 | 343 | 197 | 16 | 64 | 357 | 154 | 485 | 3.96e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033998.t1 | AT1G80360 | 68.608 | 395 | 123 | 1 | 1 | 395 | 1 | 394 | 0.0 | 595 |
| MS.gene033998.t1 | AT1G80360 | 68.608 | 395 | 123 | 1 | 1 | 395 | 1 | 394 | 0.0 | 595 |
| MS.gene033998.t1 | AT1G80360 | 68.608 | 395 | 123 | 1 | 1 | 395 | 1 | 394 | 0.0 | 595 |
| MS.gene033998.t1 | AT1G80360 | 68.608 | 395 | 123 | 1 | 1 | 395 | 1 | 394 | 0.0 | 595 |
| MS.gene033998.t1 | AT2G22250 | 28.756 | 386 | 247 | 9 | 25 | 390 | 47 | 424 | 1.20e-42 | 154 |
| MS.gene033998.t1 | AT2G22250 | 28.756 | 386 | 247 | 9 | 25 | 390 | 94 | 471 | 3.62e-42 | 154 |
| MS.gene033998.t1 | AT2G22250 | 28.756 | 386 | 247 | 9 | 25 | 390 | 94 | 471 | 3.62e-42 | 154 |
| MS.gene033998.t1 | AT1G77670 | 23.383 | 402 | 273 | 14 | 6 | 389 | 56 | 440 | 1.62e-18 | 87.4 |
| MS.gene033998.t1 | AT2G13810 | 25.485 | 361 | 213 | 13 | 64 | 391 | 108 | 445 | 1.22e-15 | 78.6 |
| MS.gene033998.t1 | AT4G33680 | 27.445 | 317 | 180 | 11 | 51 | 336 | 116 | 413 | 9.95e-15 | 75.9 |
| MS.gene033998.t1 | AT4G11280 | 23.944 | 355 | 228 | 15 | 60 | 382 | 89 | 433 | 1.00e-14 | 76.3 |
| MS.gene033998.t1 | AT2G24850 | 23.894 | 339 | 230 | 11 | 64 | 382 | 87 | 417 | 3.72e-14 | 74.3 |
| MS.gene033998.t1 | AT1G72330 | 24.561 | 342 | 200 | 13 | 64 | 357 | 170 | 501 | 9.77e-13 | 70.1 |
| MS.gene033998.t1 | AT1G72330 | 27.615 | 239 | 132 | 9 | 155 | 357 | 281 | 514 | 1.57e-12 | 69.3 |
| MS.gene033998.t1 | AT4G26200 | 22.899 | 345 | 220 | 15 | 75 | 386 | 111 | 442 | 3.48e-12 | 68.2 |
| MS.gene033998.t1 | AT5G51690 | 22.599 | 354 | 245 | 12 | 60 | 388 | 21 | 370 | 4.17e-12 | 67.4 |
| MS.gene033998.t1 | AT5G51690 | 22.599 | 354 | 245 | 12 | 60 | 388 | 144 | 493 | 5.98e-12 | 67.4 |
| MS.gene033998.t1 | AT2G22810 | 22.727 | 330 | 217 | 11 | 83 | 382 | 105 | 426 | 9.39e-11 | 63.9 |
Find 113 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCGGAGAAGGTTCTATTAA+AGG | 0.220827 | 4.3:+85102070 | MS.gene033998:CDS |
| GCATCTGGATAAAGTGTTTC+CGG | 0.228182 | 4.3:-85099611 | None:intergenic |
| TTCTTTACCTTAACCATAAT+AGG | 0.279146 | 4.3:-85097545 | None:intergenic |
| ACTCGTTCGGTAACCCATTC+AGG | 0.279683 | 4.3:-85101998 | None:intergenic |
| ACCTTATCCAATGCTTGCTT+TGG | 0.280175 | 4.3:-85098726 | None:intergenic |
| TGCACTCTACTCCTTAGAAT+TGG | 0.283839 | 4.3:+85101973 | MS.gene033998:CDS |
| CAGAGCAGCATTGGTGAAAA+AGG | 0.324208 | 4.3:+85098812 | MS.gene033998:CDS |
| AAAAGAAAGATGGGTTCTTA+TGG | 0.325486 | 4.3:+85097488 | None:intergenic |
| AGCTAAGAATGCTGTGTCTT+TGG | 0.329353 | 4.3:+85097685 | MS.gene033998:CDS |
| TTATCCAATGCTTGCTTTGG+AGG | 0.330963 | 4.3:-85098723 | None:intergenic |
| TAAGAAAGGTTTGGAAGAAT+TGG | 0.333107 | 4.3:+85102288 | MS.gene033998:CDS |
| GCAGCACCGCACGCACTTCC+AGG | 0.349728 | 4.3:-85102199 | None:intergenic |
| TTGTTCGCTGGCTAGCTAAT+AGG | 0.359579 | 4.3:+85102158 | MS.gene033998:CDS |
| TTTACAATAGTTACTAGCTT+CGG | 0.361088 | 4.3:-85100439 | None:intergenic |
| TTCTCTTTCTCGAAAGCATA+TGG | 0.362086 | 4.3:+85101094 | MS.gene033998:CDS |
| ACCAATGCTGCTCTGAGTTC+AGG | 0.364425 | 4.3:-85098804 | None:intergenic |
| TTTGCACAAATCCTCGGTTA+TGG | 0.370716 | 4.3:+85099290 | MS.gene033998:CDS |
| ATAAAGTGTTTCCGGGTTAC+CGG | 0.370893 | 4.3:-85099603 | None:intergenic |
| TATTGGTAATGCCAGTCATT+TGG | 0.376721 | 4.3:-85099568 | None:intergenic |
| GGAAACTGAGATGCCTATTA+TGG | 0.380670 | 4.3:+85097532 | MS.gene033998:CDS |
| CCATTCAGGTCCCAATTCTA+AGG | 0.385511 | 4.3:-85101984 | None:intergenic |
| GCATACCCTTCTGAAGTAGA+AGG | 0.386056 | 4.3:+85101881 | MS.gene033998:CDS |
| TGAGATGCCTATTATGGTTA+AGG | 0.394646 | 4.3:+85097538 | MS.gene033998:CDS |
| GAGAAGGAGCTATATACCTT+TGG | 0.395158 | 4.3:+85102095 | MS.gene033998:CDS |
| GTAAATCCTGGCAATCCAAC+TGG | 0.395490 | 4.3:+85100457 | MS.gene033998:CDS |
| GGAAGTGCGTGCGGTGCTGC+TGG | 0.401509 | 4.3:+85102202 | MS.gene033998:CDS |
| TTGGAGGCCCTTTCTTCTCT+CGG | 0.402434 | 4.3:+85102052 | MS.gene033998:CDS |
| GAATGCTGTGTCTTTGGCTC+AGG | 0.403806 | 4.3:+85097691 | MS.gene033998:CDS |
| CTTAGAATTGGGACCTGAAT+GGG | 0.407280 | 4.3:+85101985 | MS.gene033998:CDS |
| GAAATTATTGAAGCACAGAT+TGG | 0.414853 | 4.3:-85101941 | None:intergenic |
| GCAATGACTTTACCTGCATC+TGG | 0.415721 | 4.3:-85099626 | None:intergenic |
| CATCTGGATAAAGTGTTTCC+GGG | 0.418128 | 4.3:-85099610 | None:intergenic |
| TTACAATAGTTACTAGCTTC+GGG | 0.420849 | 4.3:-85100438 | None:intergenic |
| GGAATGATGGGATGGCGAAT+TGG | 0.421184 | 4.3:+85101115 | MS.gene033998:CDS |
| GGTTACAGCCGGTGCCAATC+AGG | 0.424776 | 4.3:+85099311 | MS.gene033998:CDS |
| ACCGGGACCAACTAGTATAT+TGG | 0.429326 | 4.3:-85099585 | None:intergenic |
| TAGGTTCCAGTTGGATTGCC+AGG | 0.430279 | 4.3:-85100463 | None:intergenic |
| GGAAATCTTAGAATCTCGTT+TGG | 0.435661 | 4.3:+85102223 | MS.gene033998:CDS |
| GCACTCTACTCCTTAGAATT+GGG | 0.437159 | 4.3:+85101974 | MS.gene033998:CDS |
| CTAGTAACTATTGTAAATCC+TGG | 0.440627 | 4.3:+85100445 | MS.gene033998:CDS |
| CTCGAAAGCATATGGAATGA+TGG | 0.442266 | 4.3:+85101102 | MS.gene033998:CDS |
| AGAAAGGCTTAAGAAAGGTT+TGG | 0.446109 | 4.3:+85102279 | MS.gene033998:CDS |
| CCTTAGAATTGGGACCTGAA+TGG | 0.449662 | 4.3:+85101984 | MS.gene033998:CDS |
| AGAAGGAGCTATATACCTTT+GGG | 0.455675 | 4.3:+85102096 | MS.gene033998:CDS |
| CACAGATTGGAATGTTGTCT+TGG | 0.456455 | 4.3:-85101928 | None:intergenic |
| AGAATTGGTTGCACATGGTT+TGG | 0.459653 | 4.3:+85102303 | MS.gene033998:CDS |
| GCCCTTTCTTCTCTCGGAGA+AGG | 0.462214 | 4.3:+85102058 | MS.gene033998:CDS |
| GAGACCTTTAGAAGAGACTC+TGG | 0.464117 | 4.3:-85100490 | None:intergenic |
| AGCTGGCTCTTGGCTTGTTG+TGG | 0.474046 | 4.3:+85100689 | MS.gene033998:CDS |
| CCTTCTGAAGTAGAAGGGCT+TGG | 0.476025 | 4.3:+85101887 | MS.gene033998:CDS |
| GTTCTTACTCTATGTGATGC+GGG | 0.477132 | 4.3:+85099494 | MS.gene033998:CDS |
| TGTCTTGGACTTTGAGAAGT+TGG | 0.477434 | 4.3:-85101913 | None:intergenic |
| TTACCGTAACGACTAATAGA+AGG | 0.482081 | 4.3:-85098768 | None:intergenic |
| AATCTTAGAATCTCGTTTGG+AGG | 0.482371 | 4.3:+85102226 | MS.gene033998:CDS |
| TAGAAGAGACTCTGGAATGT+AGG | 0.483849 | 4.3:-85100482 | None:intergenic |
| GTCTTGGACTTTGAGAAGTT+GGG | 0.486069 | 4.3:-85101912 | None:intergenic |
| CACGGGATTGCTGTTATCCC+TGG | 0.486363 | 4.3:+85102181 | MS.gene033998:CDS |
| ACCTTCTCCGAGAGAAGAAA+GGG | 0.488063 | 4.3:-85102059 | None:intergenic |
| ATGTATGAATTGAAGTAGTA+AGG | 0.492382 | 4.3:-85099539 | None:intergenic |
| GAACAGACAAATTGTCTTGG+AGG | 0.501204 | 4.3:+85102036 | MS.gene033998:CDS |
| GGCATTACCAATATACTAGT+TGG | 0.508183 | 4.3:+85099578 | MS.gene033998:CDS |
| GGTTCTATTAAAGGAGGAGA+AGG | 0.509181 | 4.3:+85102079 | MS.gene033998:CDS |
| TCCAAAGCAAGCATTGGATA+AGG | 0.512289 | 4.3:+85098725 | MS.gene033998:CDS |
| CATTCCAGAGTCTCTTCTAA+AGG | 0.515139 | 4.3:+85100486 | MS.gene033998:CDS |
| GCAGCAGAAAGGCTTAAGAA+AGG | 0.515657 | 4.3:+85102274 | MS.gene033998:CDS |
| TTATGGAAATCTTGCAAAGA+GGG | 0.518324 | 4.3:+85097505 | MS.gene033998:CDS |
| TAAAGTGTTTCCGGGTTACC+GGG | 0.520274 | 4.3:-85099602 | None:intergenic |
| AAATAATTTGCACAAATCCT+CGG | 0.526185 | 4.3:+85099284 | MS.gene033998:CDS |
| TCCTGAACTCAGAGCAGCAT+TGG | 0.527559 | 4.3:+85098803 | MS.gene033998:CDS |
| TGTGTGAGAAAGCTGGCTCT+TGG | 0.527663 | 4.3:+85100679 | MS.gene033998:CDS |
| ACTAGTTGGTCCCGGTAACC+CGG | 0.528968 | 4.3:+85099592 | MS.gene033998:CDS |
| ATAGTTACTAGCTTCGGGAC+AGG | 0.530753 | 4.3:-85100433 | None:intergenic |
| AACCTTCTCCGAGAGAAGAA+AGG | 0.530812 | 4.3:-85102060 | None:intergenic |
| AGTCGTTACGGTAACGATGA+AGG | 0.530985 | 4.3:+85098777 | MS.gene033998:CDS |
| CGCTGGCTAGCTAATAGGCA+CGG | 0.532935 | 4.3:+85102163 | MS.gene033998:CDS |
| GCAAATCTGTGTGAGAAAGC+TGG | 0.534379 | 4.3:+85100672 | MS.gene033998:CDS |
| TCGAAAGCATATGGAATGAT+GGG | 0.535229 | 4.3:+85101103 | MS.gene033998:CDS |
| ATGATTTCGAAGTTGTTCGC+TGG | 0.540586 | 4.3:+85102146 | MS.gene033998:CDS |
| TCATCGTAACCATGTCCGCT+TGG | 0.540923 | 4.3:-85102127 | None:intergenic |
| CCAAGCCCTTCTACTTCAGA+AGG | 0.541143 | 4.3:-85101887 | None:intergenic |
| TACATGTCCTTCCAAATGAC+TGG | 0.541298 | 4.3:+85099557 | MS.gene033998:CDS |
| TCCTCGGTTATGGTTACAGC+CGG | 0.542897 | 4.3:+85099300 | MS.gene033998:CDS |
| GAGCCTTCTATTAGTCGTTA+CGG | 0.547456 | 4.3:+85098765 | MS.gene033998:CDS |
| TAAGAACAGACAAATTGTCT+TGG | 0.553853 | 4.3:+85102033 | MS.gene033998:CDS |
| GCAACCTCCAAAGCAAGCAT+TGG | 0.556771 | 4.3:+85098719 | MS.gene033998:CDS |
| TTGAAACACACTTGTGTGGA+AGG | 0.559943 | 4.3:+85101052 | MS.gene033998:CDS |
| GAAACACTTTATCCAGATGC+AGG | 0.561975 | 4.3:+85099614 | MS.gene033998:CDS |
| TTCTTACTCTATGTGATGCG+GGG | 0.568076 | 4.3:+85099495 | MS.gene033998:CDS |
| CGCTTGGAATCTTCACCCAA+AGG | 0.571691 | 4.3:-85102111 | None:intergenic |
| ATTGTAGAGCAGCAGCAGAA+AGG | 0.574501 | 4.3:+85102263 | MS.gene033998:CDS |
| CAGCACCGCACGCACTTCCA+GGG | 0.574596 | 4.3:-85102198 | None:intergenic |
| AGTTCTTACTCTATGTGATG+CGG | 0.575309 | 4.3:+85099493 | MS.gene033998:CDS |
| ATTGATCACCTGATTGGCAC+CGG | 0.577365 | 4.3:-85099319 | None:intergenic |
| ACCAATATACTAGTTGGTCC+CGG | 0.579472 | 4.3:+85099584 | MS.gene033998:CDS |
| TCTGGAATGTAGGTTCCAGT+TGG | 0.581009 | 4.3:-85100472 | None:intergenic |
| TTGGAAGAATTGGTTGCACA+TGG | 0.587231 | 4.3:+85102298 | MS.gene033998:CDS |
| AAATCTTGCAAAGAGGGCTG+TGG | 0.590141 | 4.3:+85097511 | MS.gene033998:CDS |
| GTGAAGATTCCAAGCGGACA+TGG | 0.596507 | 4.3:+85102118 | MS.gene033998:CDS |
| CATACCCTTCTGAAGTAGAA+GGG | 0.598726 | 4.3:+85101882 | MS.gene033998:CDS |
| GGTAATGCCAGTCATTTGGA+AGG | 0.600013 | 4.3:-85099564 | None:intergenic |
| GCTGGCTAGCTAATAGGCAC+GGG | 0.607361 | 4.3:+85102164 | MS.gene033998:CDS |
| TCTTACTCTATGTGATGCGG+GGG | 0.608176 | 4.3:+85099496 | MS.gene033998:CDS |
| AAGCATATGGAATGATGGGA+TGG | 0.610773 | 4.3:+85101107 | MS.gene033998:CDS |
| CTTATGGAAATCTTGCAAAG+AGG | 0.623657 | 4.3:+85097504 | MS.gene033998:CDS |
| TGATTTGAAACACACTTGTG+TGG | 0.632329 | 4.3:+85101048 | MS.gene033998:CDS |
| ATTCTAAGGAGTAGAGTGCA+AGG | 0.647441 | 4.3:-85101970 | None:intergenic |
| GTTATCCCTGGAAGTGCGTG+CGG | 0.652820 | 4.3:+85102193 | MS.gene033998:CDS |
| GGAGAAGGTTCTATTAAAGG+AGG | 0.660414 | 4.3:+85102073 | MS.gene033998:CDS |
| CAAGCCCTTCTACTTCAGAA+GGG | 0.667050 | 4.3:-85101886 | None:intergenic |
| CAGATGCAGGAATTGCTACG+AGG | 0.695721 | 4.3:+85097662 | MS.gene033998:intron |
| ACCGGCTGTAACCATAACCG+AGG | 0.713175 | 4.3:-85099301 | None:intergenic |
| GTAAGGAGCATACATAACCA+CGG | 0.721488 | 4.3:-85099522 | None:intergenic |
| CTTTGGGTGAAGATTCCAAG+CGG | 0.736255 | 4.3:+85102112 | MS.gene033998:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGTTTATAATTAAAAACAT+TGG | - | chr4.3:85097931-85097950 | None:intergenic | 10.0% |
| !!! | CTAATTTATAATTTTAACAT+TGG | - | chr4.3:85097867-85097886 | None:intergenic | 10.0% |
| !! | AACACTAAAATTGAATTAAT+GGG | + | chr4.3:85100838-85100857 | MS.gene033998:intron | 15.0% |
| !! | ATATATGATATATCTAGAAA+CGG | + | chr4.3:85098372-85098391 | MS.gene033998:intron | 15.0% |
| !! | GATACAAAATATTAAGTTAA+AGG | - | chr4.3:85101347-85101366 | None:intergenic | 15.0% |
| !! | GATTTATTTCATTAATGTAA+AGG | - | chr4.3:85100756-85100775 | None:intergenic | 15.0% |
| !! | TACAAAAAATTATTGTCAAT+AGG | - | chr4.3:85099193-85099212 | None:intergenic | 15.0% |
| !! | TTTCATAAAAATTTGTCAAT+TGG | - | chr4.3:85101217-85101236 | None:intergenic | 15.0% |
| !!! | AATTATAAATTAGTCTAGAT+TGG | + | chr4.3:85097874-85097893 | MS.gene033998:intron | 15.0% |
| !!! | ATATATTAGTTGTTACTTAA+GGG | - | chr4.3:85101806-85101825 | None:intergenic | 15.0% |
| !!! | ATATCAAATTTTATTGTGAT+AGG | + | chr4.3:85099857-85099876 | MS.gene033998:intron | 15.0% |
| !!! | ATGCTAATTTTAATGAATTA+GGG | - | chr4.3:85101561-85101580 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTTTTCCCTTTAA+GGG | + | chr4.3:85099721-85099740 | MS.gene033998:intron | 15.0% |
| !!! | TATGCTAATTTTAATGAATT+AGG | - | chr4.3:85101562-85101581 | None:intergenic | 15.0% |
| !! | AAATATCCCAAAATTGAAAA+GGG | + | chr4.3:85098527-85098546 | MS.gene033998:intron | 20.0% |
| !! | CAACACTAAAATTGAATTAA+TGG | + | chr4.3:85100837-85100856 | MS.gene033998:intron | 20.0% |
| !! | GAGAAAATGAATATATCATT+TGG | - | chr4.3:85100595-85100614 | None:intergenic | 20.0% |
| !! | TATATGATATATCTAGAAAC+GGG | + | chr4.3:85098373-85098392 | MS.gene033998:intron | 20.0% |
| !! | TATATTAACAAAACAAGCAT+TGG | - | chr4.3:85097746-85097765 | None:intergenic | 20.0% |
| !! | TCAAATAAGCTAATCTAAAT+AGG | - | chr4.3:85098852-85098871 | None:intergenic | 20.0% |
| !! | TGAAAATAACTCTACAATAT+TGG | - | chr4.3:85100232-85100251 | None:intergenic | 20.0% |
| !! | TGATATGTTTAATGAGTATT+TGG | + | chr4.3:85097600-85097619 | MS.gene033998:intron | 20.0% |
| !!! | AATAAGTTGAAAAAAGCTTA+TGG | - | chr4.3:85098943-85098962 | None:intergenic | 20.0% |
| !!! | AATTTTAGTGTTGTTATCAA+AGG | - | chr4.3:85100830-85100849 | None:intergenic | 20.0% |
| !!! | ATAGCAATTTTTAGAAACAT+AGG | - | chr4.3:85098597-85098616 | None:intergenic | 20.0% |
| !!! | GATATATTAGTTGTTACTTA+AGG | - | chr4.3:85101807-85101826 | None:intergenic | 20.0% |
| !!! | GATTTTTTTTTTTCCCTTTA+AGG | + | chr4.3:85099720-85099739 | MS.gene033998:intron | 20.0% |
| !!! | GGTTTTACTTTTAAGAAATT+GGG | + | chr4.3:85099744-85099763 | MS.gene033998:intron | 20.0% |
| !!! | TATTATAAATTAGTCTAGCT+TGG | + | chr4.3:85097797-85097816 | MS.gene033998:intron | 20.0% |
| !!! | TGTGATTACTTTTACTTATA+GGG | + | chr4.3:85099142-85099161 | MS.gene033998:intron | 20.0% |
| !!! | TTTATTTTTTGTCTCTCATT+GGG | + | chr4.3:85097574-85097593 | MS.gene033998:intron | 20.0% |
| !!! | TTTTATTTTTTGTCTCTCAT+TGG | + | chr4.3:85097573-85097592 | MS.gene033998:intron | 20.0% |
| !!! | TTTTTTTTTTTCCCTTTAAG+GGG | + | chr4.3:85099722-85099741 | MS.gene033998:intron | 20.0% |
| ! | AAAAAGCAAAGAATACAACA+AGG | - | chr4.3:85100951-85100970 | None:intergenic | 25.0% |
| ! | AACATGTTACTATAGAATGT+TGG | - | chr4.3:85100044-85100063 | None:intergenic | 25.0% |
| ! | AATATCCCAAAATTGAAAAG+GGG | + | chr4.3:85098528-85098547 | MS.gene033998:intron | 25.0% |
| ! | AATGTAAAGGAATTTCCATT+AGG | - | chr4.3:85100743-85100762 | None:intergenic | 25.0% |
| ! | ACAAATCTATTATTCCTAAG+AGG | + | chr4.3:85099697-85099716 | MS.gene033998:intron | 25.0% |
| ! | ACTCCTATTATCAGTATAAT+TGG | - | chr4.3:85099885-85099904 | None:intergenic | 25.0% |
| ! | ATAAACATTTCAGCATTCAT+TGG | + | chr4.3:85099429-85099448 | MS.gene033998:intron | 25.0% |
| ! | ATATGATATATCTAGAAACG+GGG | + | chr4.3:85098374-85098393 | MS.gene033998:intron | 25.0% |
| ! | ATGTATGAATTGAAGTAGTA+AGG | - | chr4.3:85099542-85099561 | None:intergenic | 25.0% |
| ! | ATTAAACTAACAACATTGTC+AGG | + | chr4.3:85099829-85099848 | MS.gene033998:intron | 25.0% |
| ! | ATTGTCAATAGGATGTTTAA+AGG | - | chr4.3:85099182-85099201 | None:intergenic | 25.0% |
| ! | CAAATATCCCAAAATTGAAA+AGG | + | chr4.3:85098526-85098545 | MS.gene033998:intron | 25.0% |
| ! | CAAATCTATTATTCCTAAGA+GGG | + | chr4.3:85099698-85099717 | MS.gene033998:intron | 25.0% |
| ! | CAAATCTTAAGGATCAATTA+AGG | - | chr4.3:85099216-85099235 | None:intergenic | 25.0% |
| ! | CCAATGTTTGAATTATAAAG+TGG | + | chr4.3:85098070-85098089 | MS.gene033998:intron | 25.0% |
| ! | CCACTTTATAATTCAAACAT+TGG | - | chr4.3:85098073-85098092 | None:intergenic | 25.0% |
| ! | GAAAAAAAAAAATCCCTCTT+AGG | - | chr4.3:85099714-85099733 | None:intergenic | 25.0% |
| ! | GAACCAATTATACTGATAAT+AGG | + | chr4.3:85099879-85099898 | MS.gene033998:intron | 25.0% |
| ! | GTTTGTAGATCTTAAATTTG+AGG | + | chr4.3:85100983-85101002 | MS.gene033998:intron | 25.0% |
| ! | TAAAAATGTCAAGACAAAGT+TGG | + | chr4.3:85101433-85101452 | MS.gene033998:intron | 25.0% |
| ! | TAATCGCAAATTATATAGCT+GGG | - | chr4.3:85099347-85099366 | None:intergenic | 25.0% |
| ! | TGAAAAAGGTAAATGATCTA+AGG | + | chr4.3:85098826-85098845 | MS.gene033998:intron | 25.0% |
| ! | TGTTTAATGAGTATTTGGAT+TGG | + | chr4.3:85097605-85097624 | MS.gene033998:intron | 25.0% |
| ! | TTAATCGCAAATTATATAGC+TGG | - | chr4.3:85099348-85099367 | None:intergenic | 25.0% |
| ! | TTAATGTTCAAATCTGGTAA+AGG | + | chr4.3:85101774-85101793 | MS.gene033998:intron | 25.0% |
| ! | TTCAAATTGCAGTTACAAAT+TGG | + | chr4.3:85100248-85100267 | MS.gene033998:intron | 25.0% |
| ! | TTCTTTACCTTAACCATAAT+AGG | - | chr4.3:85097548-85097567 | None:intergenic | 25.0% |
| ! | TTCTTTATTCTGTCATAACA+GGG | + | chr4.3:85099370-85099389 | MS.gene033998:intron | 25.0% |
| ! | TTTCTGTAGTTGATCATTAA+TGG | + | chr4.3:85101731-85101750 | MS.gene033998:intron | 25.0% |
| !! | AAATAATTTGCACAAATCCT+CGG | + | chr4.3:85099284-85099303 | MS.gene033998:CDS | 25.0% |
| !! | AACAAGTTCCTTTTCTAAAT+CGG | + | chr4.3:85100639-85100658 | MS.gene033998:intron | 25.0% |
| !! | TAATTGCGATGTAATTTTGA+TGG | - | chr4.3:85101528-85101547 | None:intergenic | 25.0% |
| !! | TTTACAATAGTTACTAGCTT+CGG | - | chr4.3:85100442-85100461 | None:intergenic | 25.0% |
| !! | TTTATATGTGTGTGTTTTTC+TGG | + | chr4.3:85097902-85097921 | MS.gene033998:intron | 25.0% |
| !!! | ATTTTCTTGATTTTTCAGAC+TGG | + | chr4.3:85100383-85100402 | MS.gene033998:intron | 25.0% |
| !!! | GGGTTTTACTTTTAAGAAAT+TGG | + | chr4.3:85099743-85099762 | MS.gene033998:intron | 25.0% |
| !!! | GTGTGATTACTTTTACTTAT+AGG | + | chr4.3:85099141-85099160 | MS.gene033998:intron | 25.0% |
| !!! | TGTTGTATTCTTTGCTTTTT+TGG | + | chr4.3:85100951-85100970 | MS.gene033998:intron | 25.0% |
| !!! | TTCAATTTTGGGATATTTGA+TGG | - | chr4.3:85098525-85098544 | None:intergenic | 25.0% |
| !!! | TTTGTGTGTTTTTTCAATGT+TGG | + | chr4.3:85097774-85097793 | MS.gene033998:intron | 25.0% |
| !!! | TTTGTTTGCTATTAATCCAA+TGG | - | chr4.3:85099682-85099701 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTCCCTTTAAGG+GGG | + | chr4.3:85099723-85099742 | MS.gene033998:intron | 25.0% |
| AAAAGTAAAACCCCCTTAAA+GGG | - | chr4.3:85099736-85099755 | None:intergenic | 30.0% | |
| AACTAATGGAGATGCATTAT+CGG | - | chr4.3:85100330-85100349 | None:intergenic | 30.0% | |
| AAGAAATCAGACACAACTAA+TGG | - | chr4.3:85100344-85100363 | None:intergenic | 30.0% | |
| AATAATACCACAAATCCAAC+GGG | - | chr4.3:85101301-85101320 | None:intergenic | 30.0% | |
| AATCACACTAACAAGAAACT+AGG | - | chr4.3:85099129-85099148 | None:intergenic | 30.0% | |
| AATCGCAAATTATATAGCTG+GGG | - | chr4.3:85099346-85099365 | None:intergenic | 30.0% | |
| ACAGTGAAAACTGAAATTCT+TGG | + | chr4.3:85099926-85099945 | MS.gene033998:intron | 30.0% | |
| ACCAACAACAATAACAACAT+TGG | - | chr4.3:85098006-85098025 | None:intergenic | 30.0% | |
| ATCACACTAACAAGAAACTA+GGG | - | chr4.3:85099128-85099147 | None:intergenic | 30.0% | |
| CAATAATACCACAAATCCAA+CGG | - | chr4.3:85101302-85101321 | None:intergenic | 30.0% | |
| CCATAGAAAGAAAACTTGAA+TGG | - | chr4.3:85100541-85100560 | None:intergenic | 30.0% | |
| CTACAATATTGGATTCTCAT+TGG | - | chr4.3:85100221-85100240 | None:intergenic | 30.0% | |
| CTAGTAACTATTGTAAATCC+TGG | + | chr4.3:85100445-85100464 | MS.gene033998:CDS | 30.0% | |
| CTGTAGTTAATGTTCAAATC+TGG | + | chr4.3:85101768-85101787 | MS.gene033998:intron | 30.0% | |
| GAAATTATTGAAGCACAGAT+TGG | - | chr4.3:85101944-85101963 | None:intergenic | 30.0% | |
| GGATTTGTGGTATTATTGAT+AGG | + | chr4.3:85101304-85101323 | MS.gene033998:intron | 30.0% | |
| GTTCTTTATTCTGTCATAAC+AGG | + | chr4.3:85099369-85099388 | MS.gene033998:intron | 30.0% | |
| TAAAAGTAAAACCCCCTTAA+AGG | - | chr4.3:85099737-85099756 | None:intergenic | 30.0% | |
| TAAAGGAATTTCCATTAGGA+TGG | - | chr4.3:85100739-85100758 | None:intergenic | 30.0% | |
| TAAGAAAGGTTTGGAAGAAT+TGG | + | chr4.3:85102288-85102307 | MS.gene033998:CDS | 30.0% | |
| TAAGAACAGACAAATTGTCT+TGG | + | chr4.3:85102033-85102052 | MS.gene033998:CDS | 30.0% | |
| TATCACAAGATGAAGTATGA+TGG | - | chr4.3:85100004-85100023 | None:intergenic | 30.0% | |
| TGAGATTGAAGCCATAAAAT+GGG | - | chr4.3:85098331-85098350 | None:intergenic | 30.0% | |
| TGCATAAACACTTAATGTGT+AGG | - | chr4.3:85099070-85099089 | None:intergenic | 30.0% | |
| TTATGGAAATCTTGCAAAGA+GGG | + | chr4.3:85097505-85097524 | MS.gene033998:CDS | 30.0% | |
| TTATTGTCCTATATGTATGC+AGG | + | chr4.3:85101011-85101030 | MS.gene033998:intron | 30.0% | |
| TTGAGATTGAAGCCATAAAA+TGG | - | chr4.3:85098332-85098351 | None:intergenic | 30.0% | |
| ! | AAATCTCCCCTTTTCAATTT+TGG | - | chr4.3:85098537-85098556 | None:intergenic | 30.0% |
| ! | AAGAATTTCAGTTTTCACTG+TGG | - | chr4.3:85099927-85099946 | None:intergenic | 30.0% |
| ! | AATCTCCCCTTTTCAATTTT+GGG | - | chr4.3:85098536-85098555 | None:intergenic | 30.0% |
| ! | AATTATAAACTAGCCTAGCT+TGG | + | chr4.3:85097939-85097958 | MS.gene033998:intron | 30.0% |
| ! | CTGAAATTTTTCTTCTGTAG+GGG | + | chr4.3:85098685-85098704 | MS.gene033998:intron | 30.0% |
| ! | GATGGATTCGAAATACAAAA+TGG | - | chr4.3:85099986-85100005 | None:intergenic | 30.0% |
| ! | GCTGAAATTTTTCTTCTGTA+GGG | + | chr4.3:85098684-85098703 | MS.gene033998:intron | 30.0% |
| ! | TAAAGTACCTGCATACATAT+AGG | - | chr4.3:85101021-85101040 | None:intergenic | 30.0% |
| ! | TCCAATGTTGTTATTGTTGT+TGG | + | chr4.3:85098002-85098021 | MS.gene033998:intron | 30.0% |
| ! | TGAAATTTTTCTTCTGTAGG+GGG | + | chr4.3:85098686-85098705 | MS.gene033998:intron | 30.0% |
| ! | TGCTGAAATTTTTCTTCTGT+AGG | + | chr4.3:85098683-85098702 | MS.gene033998:intron | 30.0% |
| ! | TTACAATAGTTACTAGCTTC+GGG | - | chr4.3:85100441-85100460 | None:intergenic | 30.0% |
| ! | TTGATAGGAAAATTTGCTCT+AGG | + | chr4.3:85101319-85101338 | MS.gene033998:intron | 30.0% |
| !! | CCATTCAAGTTTTCTTTCTA+TGG | + | chr4.3:85100538-85100557 | MS.gene033998:intron | 30.0% |
| !! | GTTGTTTTCATAAGCTATCT+TGG | - | chr4.3:85098978-85098997 | None:intergenic | 30.0% |
| !! | TTTTGGCAAAAAGTACACTT+CGG | + | chr4.3:85098181-85098200 | MS.gene033998:intron | 30.0% |
| !!! | GTGTCAAGTTAGTCATTTTT+TGG | + | chr4.3:85101392-85101411 | MS.gene033998:intron | 30.0% |
| AAGGACTATGCAACATAACA+AGG | - | chr4.3:85100811-85100830 | None:intergenic | 35.0% | |
| AATCTTAGAATCTCGTTTGG+AGG | + | chr4.3:85102226-85102245 | MS.gene033998:CDS | 35.0% | |
| AGAAACTTCTTTACGACCAT+TGG | + | chr4.3:85099663-85099682 | MS.gene033998:intron | 35.0% | |
| AGAAAGGCTTAAGAAAGGTT+TGG | + | chr4.3:85102279-85102298 | MS.gene033998:CDS | 35.0% | |
| AGAAGGAGCTATATACCTTT+GGG | + | chr4.3:85102096-85102115 | MS.gene033998:CDS | 35.0% | |
| AGCATCAAAAAGATTACGGA+CGG | + | chr4.3:85098204-85098223 | MS.gene033998:intron | 35.0% | |
| AGTTCTTACTCTATGTGATG+CGG | + | chr4.3:85099493-85099512 | MS.gene033998:CDS | 35.0% | |
| ATCGCAAATTATATAGCTGG+GGG | - | chr4.3:85099345-85099364 | None:intergenic | 35.0% | |
| CATTCGATAGTTGTATAGCA+TGG | - | chr4.3:85101255-85101274 | None:intergenic | 35.0% | |
| CCATAAAATGGGATTCAAAC+AGG | - | chr4.3:85098320-85098339 | None:intergenic | 35.0% | |
| CTTATGGAAATCTTGCAAAG+AGG | + | chr4.3:85097504-85097523 | MS.gene033998:CDS | 35.0% | |
| GGAAATCTTAGAATCTCGTT+TGG | + | chr4.3:85102223-85102242 | MS.gene033998:CDS | 35.0% | |
| GGCAAACATTTCATGTAGTA+AGG | - | chr4.3:85098504-85098523 | None:intergenic | 35.0% | |
| GGCATTACCAATATACTAGT+TGG | + | chr4.3:85099578-85099597 | MS.gene033998:CDS | 35.0% | |
| GTAAGTCTTTACCATCCTAA+TGG | + | chr4.3:85100725-85100744 | MS.gene033998:intron | 35.0% | |
| TGAGATGCCTATTATGGTTA+AGG | + | chr4.3:85097538-85097557 | MS.gene033998:CDS | 35.0% | |
| TGATGAGTTTGGCAAAATCA+CGG | - | chr4.3:85098235-85098254 | None:intergenic | 35.0% | |
| TTACCGTAACGACTAATAGA+AGG | - | chr4.3:85098771-85098790 | None:intergenic | 35.0% | |
| TTGAGCGAACACAAATCTTA+AGG | - | chr4.3:85099227-85099246 | None:intergenic | 35.0% | |
| TTGTCAACTTGGGTCTATAT+TGG | + | chr4.3:85101690-85101709 | MS.gene033998:intron | 35.0% | |
| TTTCTAAATATCTGCAGTGC+AGG | + | chr4.3:85099457-85099476 | MS.gene033998:intron | 35.0% | |
| ! | ACTTTTTGCCAAAATCGCAA+TGG | - | chr4.3:85098175-85098194 | None:intergenic | 35.0% |
| ! | AGCAAGAGTTTTTACTCGTT+CGG | - | chr4.3:85102014-85102033 | None:intergenic | 35.0% |
| ! | CCTGTTTGAATCCCATTTTA+TGG | + | chr4.3:85098317-85098336 | MS.gene033998:intron | 35.0% |
| ! | GTTTTTGTGTTTTCAGATGC+AGG | + | chr4.3:85097649-85097668 | MS.gene033998:intron | 35.0% |
| ! | TCGAAAGCATATGGAATGAT+GGG | + | chr4.3:85101103-85101122 | MS.gene033998:CDS | 35.0% |
| ! | TCGGAGCATCAAAAAGATTA+CGG | + | chr4.3:85098200-85098219 | MS.gene033998:intron | 35.0% |
| ! | TGATTTGAAACACACTTGTG+TGG | + | chr4.3:85101048-85101067 | MS.gene033998:CDS | 35.0% |
| ! | TGATTTTGCCAAACTCATCA+CGG | + | chr4.3:85098235-85098254 | MS.gene033998:intron | 35.0% |
| ! | TTCAGATTTTCATCGTACGT+GGG | + | chr4.3:85098293-85098312 | MS.gene033998:intron | 35.0% |
| ! | TTCTCTTTCTCGAAAGCATA+TGG | + | chr4.3:85101094-85101113 | MS.gene033998:CDS | 35.0% |
| ! | TTTCAGATTTTCATCGTACG+TGG | + | chr4.3:85098292-85098311 | MS.gene033998:intron | 35.0% |
| !! | AAGAGTTTTTGAGAGAAGCT+TGG | + | chr4.3:85098263-85098282 | MS.gene033998:intron | 35.0% |
| !! | ACAAAACAAGCATTGGAAAC+AGG | - | chr4.3:85097739-85097758 | None:intergenic | 35.0% |
| !! | CTGGTTGGAAAAAGTGTTAT+CGG | + | chr4.3:85100402-85100421 | MS.gene033998:CDS | 35.0% |
| !! | TATTGGTAATGCCAGTCATT+TGG | - | chr4.3:85099571-85099590 | None:intergenic | 35.0% |
| !! | TCTTGATTTTTCAGACTGGT+TGG | + | chr4.3:85100387-85100406 | MS.gene033998:intron | 35.0% |
| ACCAATATACTAGTTGGTCC+CGG | + | chr4.3:85099584-85099603 | MS.gene033998:CDS | 40.0% | |
| ACCTTATCCAATGCTTGCTT+TGG | - | chr4.3:85098729-85098748 | None:intergenic | 40.0% | |
| AGAATTGGTTGCACATGGTT+TGG | + | chr4.3:85102303-85102322 | MS.gene033998:CDS | 40.0% | |
| AGCTAAGAATGCTGTGTCTT+TGG | + | chr4.3:85097685-85097704 | MS.gene033998:CDS | 40.0% | |
| AGTGTGTAGTAGACGAGAAA+AGG | + | chr4.3:85100151-85100170 | MS.gene033998:intron | 40.0% | |
| ATGATTTCGAAGTTGTTCGC+TGG | + | chr4.3:85102146-85102165 | MS.gene033998:CDS | 40.0% | |
| CACAGATTGGAATGTTGTCT+TGG | - | chr4.3:85101931-85101950 | None:intergenic | 40.0% | |
| CATTCCAGAGTCTCTTCTAA+AGG | + | chr4.3:85100486-85100505 | MS.gene033998:CDS | 40.0% | |
| CTCGGAGAAGGTTCTATTAA+AGG | + | chr4.3:85102070-85102089 | MS.gene033998:CDS | 40.0% | |
| CTGTTGTTGTGTGTGATTTC+TGG | + | chr4.3:85097977-85097996 | MS.gene033998:intron | 40.0% | |
| CTTAGAATTGGGACCTGAAT+GGG | + | chr4.3:85101985-85102004 | MS.gene033998:CDS | 40.0% | |
| CTTTGTATCCGTGATGAGTT+TGG | - | chr4.3:85098246-85098265 | None:intergenic | 40.0% | |
| GAAACACTTTATCCAGATGC+AGG | + | chr4.3:85099614-85099633 | MS.gene033998:CDS | 40.0% | |
| GAACAGACAAATTGTCTTGG+AGG | + | chr4.3:85102036-85102055 | MS.gene033998:CDS | 40.0% | |
| GAGAAGGAGCTATATACCTT+TGG | + | chr4.3:85102095-85102114 | MS.gene033998:CDS | 40.0% | |
| GAGCCTTCTATTAGTCGTTA+CGG | + | chr4.3:85098765-85098784 | MS.gene033998:CDS | 40.0% | |
| GCACTCTACTCCTTAGAATT+GGG | + | chr4.3:85101974-85101993 | MS.gene033998:CDS | 40.0% | |
| GGAAACTGAGATGCCTATTA+TGG | + | chr4.3:85097532-85097551 | MS.gene033998:CDS | 40.0% | |
| GGAGAAGGTTCTATTAAAGG+AGG | + | chr4.3:85102073-85102092 | MS.gene033998:CDS | 40.0% | |
| GGTTCTATTAAAGGAGGAGA+AGG | + | chr4.3:85102079-85102098 | MS.gene033998:CDS | 40.0% | |
| GTGTGTAGTAGACGAGAAAA+GGG | + | chr4.3:85100152-85100171 | MS.gene033998:intron | 40.0% | |
| GTTCTTACTCTATGTGATGC+GGG | + | chr4.3:85099494-85099513 | MS.gene033998:CDS | 40.0% | |
| TACATGTCCTTCCAAATGAC+TGG | + | chr4.3:85099557-85099576 | MS.gene033998:CDS | 40.0% | |
| TGCACTCTACTCCTTAGAAT+TGG | + | chr4.3:85101973-85101992 | MS.gene033998:CDS | 40.0% | |
| TGTGTAGTAGACGAGAAAAG+GGG | + | chr4.3:85100153-85100172 | MS.gene033998:intron | 40.0% | |
| TGTGTTAGTAAGCGCATGTT+TGG | + | chr4.3:85098117-85098136 | MS.gene033998:intron | 40.0% | |
| TTATCCAATGCTTGCTTTGG+AGG | - | chr4.3:85098726-85098745 | None:intergenic | 40.0% | |
| TTCTTACTCTATGTGATGCG+GGG | + | chr4.3:85099495-85099514 | MS.gene033998:CDS | 40.0% | |
| TTGAAACACACTTGTGTGGA+AGG | + | chr4.3:85101052-85101071 | MS.gene033998:CDS | 40.0% | |
| TTGGAAGAATTGGTTGCACA+TGG | + | chr4.3:85102298-85102317 | MS.gene033998:CDS | 40.0% | |
| TTTGCACAAATCCTCGGTTA+TGG | + | chr4.3:85099290-85099309 | MS.gene033998:CDS | 40.0% | |
| ! | AAGCATATGGAATGATGGGA+TGG | + | chr4.3:85101107-85101126 | MS.gene033998:CDS | 40.0% |
| ! | AATTTTTCTTCTGTAGGGGG+TGG | + | chr4.3:85098689-85098708 | MS.gene033998:intron | 40.0% |
| ! | ACTTATAGGGAAGTACGACT+TGG | + | chr4.3:85099155-85099174 | MS.gene033998:intron | 40.0% |
| ! | ATAAAGTGTTTCCGGGTTAC+CGG | - | chr4.3:85099606-85099625 | None:intergenic | 40.0% |
| ! | ATGGGTTGCATTCATGAATG+AGG | + | chr4.3:85100856-85100875 | MS.gene033998:intron | 40.0% |
| ! | ATTCTAAGGAGTAGAGTGCA+AGG | - | chr4.3:85101973-85101992 | None:intergenic | 40.0% |
| ! | CACAGTTGATTGCTCACTTT+TGG | + | chr4.3:85100917-85100936 | MS.gene033998:intron | 40.0% |
| ! | CATCTGGATAAAGTGTTTCC+GGG | - | chr4.3:85099613-85099632 | None:intergenic | 40.0% |
| ! | CTCGAAAGCATATGGAATGA+TGG | + | chr4.3:85101102-85101121 | MS.gene033998:CDS | 40.0% |
| ! | CTTATAGGGAAGTACGACTT+GGG | + | chr4.3:85099156-85099175 | MS.gene033998:intron | 40.0% |
| ! | GATTGGTGATCTGGAATTTG+AGG | + | chr4.3:85097622-85097641 | MS.gene033998:intron | 40.0% |
| ! | GCATCTGGATAAAGTGTTTC+CGG | - | chr4.3:85099614-85099633 | None:intergenic | 40.0% |
| ! | GCTCTCTTTTTGATGAGAAC+TGG | + | chr4.3:85098407-85098426 | MS.gene033998:intron | 40.0% |
| ! | GTAAGGAGCATACATAACCA+CGG | - | chr4.3:85099525-85099544 | None:intergenic | 40.0% |
| ! | GTCTTGGACTTTGAGAAGTT+GGG | - | chr4.3:85101915-85101934 | None:intergenic | 40.0% |
| ! | GTGTGTGTGTGTGTGTTTTA+TGG | + | chr4.3:85098044-85098063 | MS.gene033998:intron | 40.0% |
| ! | GTTTGGAATAGTGGTGAGAT+TGG | + | chr4.3:85098134-85098153 | MS.gene033998:intron | 40.0% |
| ! | TAAGCGCATGTTTGGAATAG+TGG | + | chr4.3:85098125-85098144 | MS.gene033998:intron | 40.0% |
| ! | TAGACCCAAGTTGACAAACA+TGG | - | chr4.3:85101687-85101706 | None:intergenic | 40.0% |
| ! | TGTCTTGGACTTTGAGAAGT+TGG | - | chr4.3:85101916-85101935 | None:intergenic | 40.0% |
| ! | TTTCAGTTTTCACTGTGGCA+AGG | - | chr4.3:85099922-85099941 | None:intergenic | 40.0% |
| !! | CATACCCTTCTGAAGTAGAA+GGG | + | chr4.3:85101882-85101901 | MS.gene033998:CDS | 40.0% |
| !! | GAGTATTTGGATTGGTGATC+TGG | + | chr4.3:85097613-85097632 | MS.gene033998:intron | 40.0% |
| !! | TAGAAGAGACTCTGGAATGT+AGG | - | chr4.3:85100485-85100504 | None:intergenic | 40.0% |
| !! | TCCAAAGCAAGCATTGGATA+AGG | + | chr4.3:85098725-85098744 | MS.gene033998:CDS | 40.0% |
| AAATCTTGCAAAGAGGGCTG+TGG | + | chr4.3:85097511-85097530 | MS.gene033998:CDS | 45.0% | |
| AACCTTCTCCGAGAGAAGAA+AGG | - | chr4.3:85102063-85102082 | None:intergenic | 45.0% | |
| ACAGCAACAATAGCCAAGCT+AGG | - | chr4.3:85097955-85097974 | None:intergenic | 45.0% | |
| ACCGGGACCAACTAGTATAT+TGG | - | chr4.3:85099588-85099607 | None:intergenic | 45.0% | |
| ACCTTCTCCGAGAGAAGAAA+GGG | - | chr4.3:85102062-85102081 | None:intergenic | 45.0% | |
| AGCCTCCATGTTTGTCAACT+TGG | + | chr4.3:85101679-85101698 | MS.gene033998:intron | 45.0% | |
| AGTCGTTACGGTAACGATGA+AGG | + | chr4.3:85098777-85098796 | MS.gene033998:CDS | 45.0% | |
| ATTGATCACCTGATTGGCAC+CGG | - | chr4.3:85099322-85099341 | None:intergenic | 45.0% | |
| ATTGTAGAGCAGCAGCAGAA+AGG | + | chr4.3:85102263-85102282 | MS.gene033998:CDS | 45.0% | |
| CAAGAAACTAGGGCTCTGTT+TGG | - | chr4.3:85099118-85099137 | None:intergenic | 45.0% | |
| CAAGCCCTTCTACTTCAGAA+GGG | - | chr4.3:85101889-85101908 | None:intergenic | 45.0% | |
| CACACAGATTTGCAATCCTC+TGG | - | chr4.3:85100665-85100684 | None:intergenic | 45.0% | |
| CCATTCAGGTCCCAATTCTA+AGG | - | chr4.3:85101987-85102006 | None:intergenic | 45.0% | |
| CCTTAGAATTGGGACCTGAA+TGG | + | chr4.3:85101984-85102003 | MS.gene033998:CDS | 45.0% | |
| CTTTGGGTGAAGATTCCAAG+CGG | + | chr4.3:85102112-85102131 | MS.gene033998:CDS | 45.0% | |
| GCAAATCTGTGTGAGAAAGC+TGG | + | chr4.3:85100672-85100691 | MS.gene033998:CDS | 45.0% | |
| GCAATGACTTTACCTGCATC+TGG | - | chr4.3:85099629-85099648 | None:intergenic | 45.0% | |
| GCAGCAGAAAGGCTTAAGAA+AGG | + | chr4.3:85102274-85102293 | MS.gene033998:CDS | 45.0% | |
| GCCTCCATGTTTGTCAACTT+GGG | + | chr4.3:85101680-85101699 | MS.gene033998:intron | 45.0% | |
| GGTAATGCCAGTCATTTGGA+AGG | - | chr4.3:85099567-85099586 | None:intergenic | 45.0% | |
| GTAAATCCTGGCAATCCAAC+TGG | + | chr4.3:85100457-85100476 | MS.gene033998:CDS | 45.0% | |
| TCTTACTCTATGTGATGCGG+GGG | + | chr4.3:85099496-85099515 | MS.gene033998:CDS | 45.0% | |
| TGAGTTTGGCAAAATCACGG+CGG | - | chr4.3:85098232-85098251 | None:intergenic | 45.0% | |
| TGGAATAGTGGTGAGATTGG+AGG | + | chr4.3:85098137-85098156 | MS.gene033998:intron | 45.0% | |
| TTCTGTAGGGGGTGGTTTAT+TGG | + | chr4.3:85098697-85098716 | MS.gene033998:intron | 45.0% | |
| ! | ACCCAAGTTGACAAACATGG+AGG | - | chr4.3:85101684-85101703 | None:intergenic | 45.0% |
| ! | ATAGTTACTAGCTTCGGGAC+AGG | - | chr4.3:85100436-85100455 | None:intergenic | 45.0% |
| ! | GAGACCTTTAGAAGAGACTC+TGG | - | chr4.3:85100493-85100512 | None:intergenic | 45.0% |
| ! | TAAAGTGTTTCCGGGTTACC+GGG | - | chr4.3:85099605-85099624 | None:intergenic | 45.0% |
| ! | TCCTCTGGCCGATTTAGAAA+AGG | - | chr4.3:85100650-85100669 | None:intergenic | 45.0% |
| ! | TCCTTTTCTAAATCGGCCAG+AGG | + | chr4.3:85100646-85100665 | MS.gene033998:intron | 45.0% |
| ! | TCTGGAATGTAGGTTCCAGT+TGG | - | chr4.3:85100475-85100494 | None:intergenic | 45.0% |
| ! | TTGTTCGCTGGCTAGCTAAT+AGG | + | chr4.3:85102158-85102177 | MS.gene033998:CDS | 45.0% |
| !! | CAGAGCAGCATTGGTGAAAA+AGG | + | chr4.3:85098812-85098831 | MS.gene033998:CDS | 45.0% |
| !! | GCATACCCTTCTGAAGTAGA+AGG | + | chr4.3:85101881-85101900 | MS.gene033998:CDS | 45.0% |
| AACATGCAGTGATGTCCCGT+TGG | + | chr4.3:85101283-85101302 | MS.gene033998:intron | 50.0% | |
| AACTGGATCCTCTTGCAGTC+AGG | + | chr4.3:85098424-85098443 | MS.gene033998:intron | 50.0% | |
| ACTCGTTCGGTAACCCATTC+AGG | - | chr4.3:85102001-85102020 | None:intergenic | 50.0% | |
| ACTGGATCCTCTTGCAGTCA+GGG | + | chr4.3:85098425-85098444 | MS.gene033998:intron | 50.0% | |
| CAGATGCAGGAATTGCTACG+AGG | + | chr4.3:85097662-85097681 | MS.gene033998:intron | 50.0% | |
| CCAAGCCCTTCTACTTCAGA+AGG | - | chr4.3:85101890-85101909 | None:intergenic | 50.0% | |
| CGCTTGGAATCTTCACCCAA+AGG | - | chr4.3:85102114-85102133 | None:intergenic | 50.0% | |
| CTCAATGCAAGCGACATGAG+TGG | + | chr4.3:85098347-85098366 | MS.gene033998:intron | 50.0% | |
| GCAACCTCCAAAGCAAGCAT+TGG | + | chr4.3:85098719-85098738 | MS.gene033998:CDS | 50.0% | |
| GTGAAGATTCCAAGCGGACA+TGG | + | chr4.3:85102118-85102137 | MS.gene033998:CDS | 50.0% | |
| GTGATGTCCCGTTGGATTTG+TGG | + | chr4.3:85101291-85101310 | MS.gene033998:intron | 50.0% | |
| TAGGTTCCAGTTGGATTGCC+AGG | - | chr4.3:85100466-85100485 | None:intergenic | 50.0% | |
| TCATCGTAACCATGTCCGCT+TGG | - | chr4.3:85102130-85102149 | None:intergenic | 50.0% | |
| TCCTCGGTTATGGTTACAGC+CGG | + | chr4.3:85099300-85099319 | MS.gene033998:CDS | 50.0% | |
| TCCTGAACTCAGAGCAGCAT+TGG | + | chr4.3:85098803-85098822 | MS.gene033998:CDS | 50.0% | |
| TGGGGGATTGATCACCTGAT+TGG | - | chr4.3:85099328-85099347 | None:intergenic | 50.0% | |
| TTGGAGGCCCTTTCTTCTCT+CGG | + | chr4.3:85102052-85102071 | MS.gene033998:CDS | 50.0% | |
| ! | ACCAATGCTGCTCTGAGTTC+AGG | - | chr4.3:85098807-85098826 | None:intergenic | 50.0% |
| ! | ACGACGAGCCATTGCGATTT+TGG | + | chr4.3:85098164-85098183 | MS.gene033998:intron | 50.0% |
| ! | GAATGCTGTGTCTTTGGCTC+AGG | + | chr4.3:85097691-85097710 | MS.gene033998:CDS | 50.0% |
| ! | GGAATGATGGGATGGCGAAT+TGG | + | chr4.3:85101115-85101134 | MS.gene033998:CDS | 50.0% |
| ! | TGTGTGAGAAAGCTGGCTCT+TGG | + | chr4.3:85100679-85100698 | MS.gene033998:CDS | 50.0% |
| !! | CCTTCTGAAGTAGAAGGGCT+TGG | + | chr4.3:85101887-85101906 | MS.gene033998:CDS | 50.0% |
| !! | GGGTCTATATTGGTGCTGAG+CGG | + | chr4.3:85101700-85101719 | MS.gene033998:intron | 50.0% |
| ACCGGCTGTAACCATAACCG+AGG | - | chr4.3:85099304-85099323 | None:intergenic | 55.0% | |
| ACTAGTTGGTCCCGGTAACC+CGG | + | chr4.3:85099592-85099611 | MS.gene033998:CDS | 55.0% | |
| CTGGATCCTCTTGCAGTCAG+GGG | + | chr4.3:85098426-85098445 | MS.gene033998:intron | 55.0% | |
| GCCCTTTCTTCTCTCGGAGA+AGG | + | chr4.3:85102058-85102077 | MS.gene033998:CDS | 55.0% | |
| TGTGATCCCCTGACTGCAAG+AGG | - | chr4.3:85098435-85098454 | None:intergenic | 55.0% | |
| ! | CACGGGATTGCTGTTATCCC+TGG | + | chr4.3:85102181-85102200 | MS.gene033998:CDS | 55.0% |
| ! | CGCTGGCTAGCTAATAGGCA+CGG | + | chr4.3:85102163-85102182 | MS.gene033998:CDS | 55.0% |
| ! | GCTGGCTAGCTAATAGGCAC+GGG | + | chr4.3:85102164-85102183 | MS.gene033998:CDS | 55.0% |
| ! | GTTATCCCTGGAAGTGCGTG+CGG | + | chr4.3:85102193-85102212 | MS.gene033998:CDS | 55.0% |
| !! | AGCTGGCTCTTGGCTTGTTG+TGG | + | chr4.3:85100689-85100708 | MS.gene033998:CDS | 55.0% |
| ATGTGATGCGGGGGATTCCG+TGG | + | chr4.3:85099505-85099524 | MS.gene033998:CDS | 60.0% | |
| ! | GGTTACAGCCGGTGCCAATC+AGG | + | chr4.3:85099311-85099330 | MS.gene033998:CDS | 60.0% |
| CAGCACCGCACGCACTTCCA+GGG | - | chr4.3:85102201-85102220 | None:intergenic | 65.0% | |
| GCAGCACCGCACGCACTTCC+AGG | - | chr4.3:85102202-85102221 | None:intergenic | 70.0% | |
| !! | GGAAGTGCGTGCGGTGCTGC+TGG | + | chr4.3:85102202-85102221 | MS.gene033998:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 85097497 | 85102336 | 85097497 | ID=MS.gene033998 |
| chr4.3 | mRNA | 85097497 | 85102336 | 85097497 | ID=MS.gene033998.t1;Parent=MS.gene033998 |
| chr4.3 | exon | 85097497 | 85097559 | 85097497 | ID=MS.gene033998.t1.exon1;Parent=MS.gene033998.t1 |
| chr4.3 | CDS | 85097497 | 85097559 | 85097497 | ID=cds.MS.gene033998.t1;Parent=MS.gene033998.t1 |
| chr4.3 | exon | 85097665 | 85097712 | 85097665 | ID=MS.gene033998.t1.exon2;Parent=MS.gene033998.t1 |
| chr4.3 | CDS | 85097665 | 85097712 | 85097665 | ID=cds.MS.gene033998.t1;Parent=MS.gene033998.t1 |
| chr4.3 | exon | 85098705 | 85098833 | 85098705 | ID=MS.gene033998.t1.exon3;Parent=MS.gene033998.t1 |
| chr4.3 | CDS | 85098705 | 85098833 | 85098705 | ID=cds.MS.gene033998.t1;Parent=MS.gene033998.t1 |
| chr4.3 | exon | 85099273 | 85099332 | 85099273 | ID=MS.gene033998.t1.exon4;Parent=MS.gene033998.t1 |
| chr4.3 | CDS | 85099273 | 85099332 | 85099273 | ID=cds.MS.gene033998.t1;Parent=MS.gene033998.t1 |
| chr4.3 | exon | 85099479 | 85099635 | 85099479 | ID=MS.gene033998.t1.exon5;Parent=MS.gene033998.t1 |
| chr4.3 | CDS | 85099479 | 85099635 | 85099479 | ID=cds.MS.gene033998.t1;Parent=MS.gene033998.t1 |
| chr4.3 | exon | 85100401 | 85100507 | 85100401 | ID=MS.gene033998.t1.exon6;Parent=MS.gene033998.t1 |
| chr4.3 | CDS | 85100401 | 85100507 | 85100401 | ID=cds.MS.gene033998.t1;Parent=MS.gene033998.t1 |
| chr4.3 | exon | 85100666 | 85100724 | 85100666 | ID=MS.gene033998.t1.exon7;Parent=MS.gene033998.t1 |
| chr4.3 | CDS | 85100666 | 85100724 | 85100666 | ID=cds.MS.gene033998.t1;Parent=MS.gene033998.t1 |
| chr4.3 | exon | 85101033 | 85101141 | 85101033 | ID=MS.gene033998.t1.exon8;Parent=MS.gene033998.t1 |
| chr4.3 | CDS | 85101033 | 85101141 | 85101033 | ID=cds.MS.gene033998.t1;Parent=MS.gene033998.t1 |
| chr4.3 | exon | 85101878 | 85102336 | 85101878 | ID=MS.gene033998.t1.exon9;Parent=MS.gene033998.t1 |
| chr4.3 | CDS | 85101878 | 85102336 | 85101878 | ID=cds.MS.gene033998.t1;Parent=MS.gene033998.t1 |
| Gene Sequence |
| Protein sequence |
