Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035692.t1 | XP_003610159.1 | 97.9 | 576 | 12 | 0 | 1 | 576 | 1 | 576 | 0.00E+00 | 1089.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035692.t1 | A2AJL3 | 45.5 | 573 | 286 | 7 | 1 | 571 | 1 | 549 | 2.0e-138 | 494.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035692.t1 | G7JD18 | 97.9 | 576 | 12 | 0 | 1 | 576 | 1 | 576 | 0.0e+00 | 1089.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene035692 | MS.gene48333 | PPI |
| MS.gene035692 | MS.gene24749 | PPI |
| MS.gene011327 | MS.gene035692 | PPI |
| MS.gene035692 | MS.gene56912 | PPI |
| MS.gene70673 | MS.gene035692 | PPI |
| MS.gene035692 | MS.gene033288 | PPI |
| MS.gene035692 | MS.gene022347 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035692.t1 | MTR_4g128640 | 97.743 | 576 | 13 | 0 | 1 | 576 | 1 | 576 | 0.0 | 1169 |
| MS.gene035692.t1 | MTR_4g128640 | 94.991 | 579 | 20 | 2 | 1 | 576 | 1 | 573 | 0.0 | 1100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035692.t1 | AT4G30310 | 79.756 | 573 | 114 | 1 | 6 | 576 | 7 | 579 | 0.0 | 976 |
| MS.gene035692.t1 | AT4G30310 | 79.098 | 488 | 94 | 1 | 6 | 493 | 7 | 486 | 0.0 | 827 |
| MS.gene035692.t1 | AT4G30310 | 80.911 | 461 | 86 | 1 | 118 | 576 | 1 | 461 | 0.0 | 805 |
| MS.gene035692.t1 | AT4G30310 | 80.392 | 459 | 82 | 1 | 118 | 576 | 1 | 451 | 0.0 | 796 |
Find 167 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTTTGGTGGTTGCATTTC+TGG | 0.088084 | 8.4:+5912999 | None:intergenic |
| GCTCTTGGGTGCTGCTATTC+TGG | 0.108620 | 8.4:-5907752 | MS.gene035692:CDS |
| CCTGGCCATCCTTTGGGTTC+TGG | 0.174434 | 8.4:-5911200 | MS.gene035692:CDS |
| CAGGAACATGCTGATATTAT+TGG | 0.193681 | 8.4:-5908940 | MS.gene035692:intron |
| GCCACGGAATATCTTGTATT+TGG | 0.194882 | 8.4:+5906926 | None:intergenic |
| GTGGGTGGGATGATGAGTTT+TGG | 0.198692 | 8.4:-5912135 | MS.gene035692:CDS |
| ATCTAACTTTCCAGCTTCTA+TGG | 0.200690 | 8.4:-5912437 | MS.gene035692:intron |
| CGCTTTCCCTGGCCATCCTT+TGG | 0.231526 | 8.4:-5911207 | MS.gene035692:CDS |
| GAGCAGAACCAAACCTTTAT+AGG | 0.233071 | 8.4:-5909610 | MS.gene035692:CDS |
| AATTGTTCATTCCTGGGATT+TGG | 0.236868 | 8.4:-5910674 | MS.gene035692:CDS |
| ATTGTTCATTCCTGGGATTT+GGG | 0.242505 | 8.4:-5910673 | MS.gene035692:CDS |
| TTTGCACCACAGTTTGTAAA+TGG | 0.263446 | 8.4:-5912222 | MS.gene035692:CDS |
| CTTTCCATTGGAAGAATTAC+AGG | 0.277934 | 8.4:+5907784 | None:intergenic |
| CAGCAATGGTACCAGAATAT+TGG | 0.292707 | 8.4:-5909889 | MS.gene035692:CDS |
| GAGTGCTACTGGTGCATTAT+TGG | 0.296050 | 8.4:-5909849 | MS.gene035692:CDS |
| GAAGGACATCATGCTAAAAT+AGG | 0.301530 | 8.4:-5912085 | MS.gene035692:intron |
| AGCTGCATTCAGGGCTTTCA+TGG | 0.304897 | 8.4:+5907690 | None:intergenic |
| CATGTTCTTCCTGACTTTCA+TGG | 0.316014 | 8.4:-5909568 | MS.gene035692:CDS |
| TTCCGACAGCTCACCTGTTT+CGG | 0.328398 | 8.4:-5913147 | MS.gene035692:CDS |
| CGGAGCAAATTGTTCATTCC+TGG | 0.329096 | 8.4:-5910681 | MS.gene035692:CDS |
| AAGAAAATTTGCAAGAATCT+TGG | 0.330498 | 8.4:-5912410 | MS.gene035692:CDS |
| TTCAGTCAGGGCGCCTATAA+AGG | 0.331186 | 8.4:+5909597 | None:intergenic |
| CTCTTGGGTGCTGCTATTCT+GGG | 0.338717 | 8.4:-5907751 | MS.gene035692:CDS |
| GCTTTCCCTGGCCATCCTTT+GGG | 0.344709 | 8.4:-5911206 | MS.gene035692:CDS |
| ACACCTGACCAGCTGCATTC+AGG | 0.348731 | 8.4:+5907680 | None:intergenic |
| TGTAGATAGGGTTCTTTGAT+AGG | 0.353694 | 8.4:+5908965 | None:intergenic |
| CAAGAAGAAATGTGATAGTA+TGG | 0.357580 | 8.4:-5913106 | MS.gene035692:CDS |
| CAAAGAAATATAATAGCCTT+AGG | 0.362518 | 8.4:-5907717 | MS.gene035692:CDS |
| GCTCACCTGTTTCGGTTTCT+CGG | 0.363236 | 8.4:-5913139 | MS.gene035692:CDS |
| AAATCAAAAGGAGTTATCTA+TGG | 0.364935 | 8.4:-5909439 | MS.gene035692:CDS |
| AGCAATCTTCTACAGATATA+TGG | 0.367313 | 8.4:-5913370 | MS.gene035692:CDS |
| GATGCTCATGCTGGTGGCGT+GGG | 0.370406 | 8.4:-5910902 | MS.gene035692:CDS |
| TGGACCAGCGCGAGCGCTGC+CGG | 0.374993 | 8.4:+5913676 | None:intergenic |
| TGATACAGATTCCCGAGATA+TGG | 0.379808 | 8.4:-5912164 | MS.gene035692:CDS |
| GCATGTTCCTGAATGTAGAT+AGG | 0.380329 | 8.4:+5908952 | None:intergenic |
| TACAAGTAAATCACCTGTAT+TGG | 0.383130 | 8.4:-5913045 | MS.gene035692:CDS |
| CACCTGACCAGCTGCATTCA+GGG | 0.386795 | 8.4:+5907681 | None:intergenic |
| TAGAGAGCTGTTGTTCATAA+AGG | 0.387938 | 8.4:+5906904 | None:intergenic |
| CAGGAACTGGGTCTTGTGCC+AGG | 0.395078 | 8.4:-5910950 | MS.gene035692:CDS |
| GTTTGTAAATGGACATATCT+TGG | 0.395154 | 8.4:-5912211 | MS.gene035692:CDS |
| TGAGTGACTGGTTGTCATAC+AGG | 0.406255 | 8.4:-5912362 | MS.gene035692:intron |
| GATGTCCCAACAGGAATTCC+TGG | 0.413797 | 8.4:+5910932 | None:intergenic |
| TGAGCTTCTGAACAAGCTCT+TGG | 0.422616 | 8.4:-5909647 | MS.gene035692:CDS |
| GAACATGTAAATCTTCAGTC+AGG | 0.427767 | 8.4:+5909584 | None:intergenic |
| CTAGCAGCCCGATACAGATA+TGG | 0.427837 | 8.4:-5913536 | MS.gene035692:CDS |
| TTTGCAAGAATCTTGGTCAA+TGG | 0.433970 | 8.4:-5912403 | MS.gene035692:CDS |
| TGGTACTTCTACATGTCATA+TGG | 0.435110 | 8.4:-5910712 | MS.gene035692:CDS |
| TTCCTGACTTTCATGGGAAT+AGG | 0.435627 | 8.4:-5909561 | MS.gene035692:intron |
| GATGAGGAAGGAAAGCTTCT+CGG | 0.436211 | 8.4:-5913564 | MS.gene035692:CDS |
| CCATCTTTCCATATCTGTAT+CGG | 0.442697 | 8.4:+5913528 | None:intergenic |
| ACCTACAGAAGTACAGAGTC+TGG | 0.443527 | 8.4:-5913297 | MS.gene035692:CDS |
| CCAGAACCCAAAGGATGGCC+AGG | 0.443578 | 8.4:+5911200 | None:intergenic |
| GGCACCGGCAGCGCTCGCGC+TGG | 0.448012 | 8.4:-5913680 | MS.gene035692:intron |
| ACCCACAAGCTTCCATATCT+CGG | 0.448292 | 8.4:+5912152 | None:intergenic |
| GGAAAGTGAATCTGTGCTCT+TGG | 0.451695 | 8.4:-5907767 | MS.gene035692:CDS |
| CCTTCAGTAAGCCAATATTC+TGG | 0.454185 | 8.4:+5909878 | None:intergenic |
| TACCTATTCCCATGAAAGTC+AGG | 0.457567 | 8.4:+5909559 | None:intergenic |
| ATGTTCTTCCTGACTTTCAT+GGG | 0.458051 | 8.4:-5909567 | MS.gene035692:CDS |
| GACAACCTTCAGTTTCTGAT+GGG | 0.462804 | 8.4:+5910861 | None:intergenic |
| TTGTGCCAGGAATTCCTGTT+GGG | 0.464564 | 8.4:-5910937 | MS.gene035692:CDS |
| AGCCCTGAATGCAGCTGGTC+AGG | 0.465495 | 8.4:-5907683 | MS.gene035692:intron |
| TTCTGTGATGGCTCAGGCGT+TGG | 0.466708 | 8.4:-5906877 | MS.gene035692:CDS |
| GGAGCAAATTGTTCATTCCT+GGG | 0.468555 | 8.4:-5910680 | MS.gene035692:CDS |
| AGTTCTAACGGTACCTTTGG+TGG | 0.470780 | 8.4:+5912987 | None:intergenic |
| CCACTCCGAGAAACCGAAAC+AGG | 0.474301 | 8.4:+5913134 | None:intergenic |
| GGGCGAAGTGTCGCTTTCCC+TGG | 0.475188 | 8.4:-5911218 | MS.gene035692:CDS |
| GGAGCGAGAAGCAGAAGGTT+CGG | 0.475193 | 8.4:+5913724 | None:intergenic |
| TCAGGGCGCCTATAAAGGTT+TGG | 0.475718 | 8.4:+5909602 | None:intergenic |
| ACTGTGCAGGGCATTGCATA+TGG | 0.476650 | 8.4:-5909367 | MS.gene035692:CDS |
| AACCGTATGGTGTTAGTTTG+TGG | 0.476840 | 8.4:-5910732 | MS.gene035692:CDS |
| AGCAGAAGGTTCGGTGGGAG+AGG | 0.479426 | 8.4:+5913733 | None:intergenic |
| CAGGAATGAACAATTTGCTC+CGG | 0.480068 | 8.4:+5910682 | None:intergenic |
| CCCGAGATATGGAAGCTTGT+GGG | 0.481065 | 8.4:-5912153 | MS.gene035692:CDS |
| CCTTCGCTGCAGTAGGAGTA+AGG | 0.484393 | 8.4:+5911177 | None:intergenic |
| TGACACAAGTGATCAACAAT+TGG | 0.484665 | 8.4:-5909407 | MS.gene035692:CDS |
| ATATCTTGTATTTGGCATCA+TGG | 0.486058 | 8.4:+5906934 | None:intergenic |
| CTCGGCGTCGACGTCGGCAC+CGG | 0.486914 | 8.4:-5913695 | MS.gene035692:CDS |
| GAAGGCGGGCAGAGTGCTAC+TGG | 0.487058 | 8.4:-5909860 | MS.gene035692:CDS |
| GGACAACCTTCAGTTTCTGA+TGG | 0.487406 | 8.4:+5910860 | None:intergenic |
| ATTTGCAAGGTGTATAGAAC+CGG | 0.490689 | 8.4:+5909805 | None:intergenic |
| CATCTTTCCATATCTGTATC+GGG | 0.490835 | 8.4:+5913529 | None:intergenic |
| TTGTTCATTCCTGGGATTTG+GGG | 0.492785 | 8.4:-5910672 | MS.gene035692:CDS |
| TCTAACTTTCCAGCTTCTAT+GGG | 0.496091 | 8.4:-5912436 | MS.gene035692:intron |
| TCAATCAATGATGTCCCAAC+AGG | 0.497590 | 8.4:+5910923 | None:intergenic |
| GGGCTTTCATGGCCTCCCTA+AGG | 0.499701 | 8.4:+5907701 | None:intergenic |
| CCTGTTTCGGTTTCTCGGAG+TGG | 0.501459 | 8.4:-5913134 | MS.gene035692:CDS |
| AGCACAGATTCACTTTCCAT+TGG | 0.502655 | 8.4:+5907772 | None:intergenic |
| TGATGCTCATGCTGGTGGCG+TGG | 0.503744 | 8.4:-5910903 | MS.gene035692:CDS |
| CTTGTGCCAGGAATTCCTGT+TGG | 0.504324 | 8.4:-5910938 | MS.gene035692:CDS |
| GAAAGTGAATCTGTGCTCTT+GGG | 0.505110 | 8.4:-5907766 | MS.gene035692:CDS |
| GACGTCGACGCCGAGGAAGA+TGG | 0.505360 | 8.4:+5913703 | None:intergenic |
| ATGCTCATGCTGGTGGCGTG+GGG | 0.506408 | 8.4:-5910901 | MS.gene035692:CDS |
| CCACCACAGTATTCCAATAC+AGG | 0.506731 | 8.4:+5913032 | None:intergenic |
| TTGTATTGATCCTTTCAGCT+TGG | 0.509862 | 8.4:+5913063 | None:intergenic |
| CCCACAAGCTTCCATATCTC+GGG | 0.512125 | 8.4:+5912153 | None:intergenic |
| AAAGAAATATAATAGCCTTA+GGG | 0.515674 | 8.4:-5907716 | MS.gene035692:CDS |
| GGTGGATGGATTTGAGTGAC+TGG | 0.517100 | 8.4:-5912374 | MS.gene035692:CDS |
| AAAGAACCCTATCTACATTC+AGG | 0.526921 | 8.4:-5908959 | MS.gene035692:CDS |
| CTGCCCTGTAATTCTTCCAA+TGG | 0.528088 | 8.4:-5907788 | MS.gene035692:CDS |
| CATCCTTACTTTGTGACCAT+GGG | 0.529335 | 8.4:+5909315 | None:intergenic |
| CATGTTCCTGAATGTAGATA+GGG | 0.529832 | 8.4:+5908953 | None:intergenic |
| AAGAAATGTGATAGTATGGA+TGG | 0.531924 | 8.4:-5913102 | MS.gene035692:CDS |
| TAATCGTTCTGTGATGGCTC+AGG | 0.533125 | 8.4:-5906883 | MS.gene035692:CDS |
| ATTGCAGACCCAAAATCAAA+AGG | 0.535856 | 8.4:-5909451 | MS.gene035692:CDS |
| CGAGAAGCAGAAGGTTCGGT+GGG | 0.539421 | 8.4:+5913728 | None:intergenic |
| CAATGCCCTGCACAGTTGCT+AGG | 0.539531 | 8.4:+5909374 | None:intergenic |
| TCTATACCTAGCAACTGTGC+AGG | 0.543459 | 8.4:-5909380 | MS.gene035692:CDS |
| ATGAAAGCCCTGAATGCAGC+TGG | 0.545563 | 8.4:-5907688 | MS.gene035692:CDS |
| GGTTTGGGTGATCTTGTTGA+AGG | 0.545633 | 8.4:-5912103 | MS.gene035692:CDS |
| GCATCCTTACTTTGTGACCA+TGG | 0.549525 | 8.4:+5909314 | None:intergenic |
| GGGAAGCAGCTCTATTTGCA+AGG | 0.553538 | 8.4:+5909792 | None:intergenic |
| CCTTACTCCTACTGCAGCGA+AGG | 0.555644 | 8.4:-5911177 | MS.gene035692:intron |
| TTCGCAGCTACTTGTTCACT+CGG | 0.559234 | 8.4:-5913272 | MS.gene035692:intron |
| AATATTGGCTTACTGAAGGC+GGG | 0.560778 | 8.4:-5909874 | MS.gene035692:CDS |
| GGAAGCAATTTGCAACCGTA+TGG | 0.561289 | 8.4:-5910745 | MS.gene035692:CDS |
| ATCTTCCTCGGCGTCGACGT+CGG | 0.564258 | 8.4:-5913701 | MS.gene035692:CDS |
| CATGTCATATGGCTGTATCC+CGG | 0.565315 | 8.4:-5910701 | MS.gene035692:CDS |
| GCGAGAAGCAGAAGGTTCGG+TGG | 0.565317 | 8.4:+5913727 | None:intergenic |
| GAATATTGGCTTACTGAAGG+CGG | 0.565847 | 8.4:-5909875 | MS.gene035692:CDS |
| AGGAATGAACAATTTGCTCC+GGG | 0.568276 | 8.4:+5910683 | None:intergenic |
| CCGATACAGATATGGAAAGA+TGG | 0.571912 | 8.4:-5913528 | MS.gene035692:CDS |
| GCTTCTCGCTCCATCTTCCT+CGG | 0.576028 | 8.4:-5913713 | MS.gene035692:CDS |
| CATATAATTGAAAACCATGC+CGG | 0.578445 | 8.4:-5909824 | MS.gene035692:CDS |
| ACCAGAAATGCAACCACCAA+AGG | 0.579084 | 8.4:-5913000 | MS.gene035692:intron |
| CAGAACCCAAAGGATGGCCA+GGG | 0.580895 | 8.4:+5911201 | None:intergenic |
| TCCCGAGATATGGAAGCTTG+TGG | 0.581118 | 8.4:-5912154 | MS.gene035692:CDS |
| TACCACAAACTAACACCATA+CGG | 0.584648 | 8.4:+5910730 | None:intergenic |
| TCATTGATTGATGCTCATGC+TGG | 0.585328 | 8.4:-5910911 | MS.gene035692:CDS |
| AGTAGTCTACCTGACCAAAA+CGG | 0.588840 | 8.4:+5910648 | None:intergenic |
| AACCGAAACAGGTGAGCTGT+CGG | 0.593045 | 8.4:+5913145 | None:intergenic |
| GCTCTCTAATCGTTCTGTGA+TGG | 0.593052 | 8.4:-5906889 | MS.gene035692:CDS |
| CAAGGTGTATAGAACCGGCA+TGG | 0.596311 | 8.4:+5909810 | None:intergenic |
| TGTTTATGAATTAGTTGCGG+TGG | 0.598795 | 8.4:-5913171 | MS.gene035692:intron |
| TGTTCATTCCTGGGATTTGG+GGG | 0.599170 | 8.4:-5910671 | MS.gene035692:CDS |
| GCAGGCTTGTTTGATGAGGA+AGG | 0.605646 | 8.4:-5913576 | MS.gene035692:intron |
| GAGATATGGAAGCTTGTGGG+TGG | 0.607291 | 8.4:-5912150 | MS.gene035692:CDS |
| CTATACCTAGCAACTGTGCA+GGG | 0.609843 | 8.4:-5909379 | MS.gene035692:CDS |
| TAAGGCCAGAACCCAAAGGA+TGG | 0.612845 | 8.4:+5911195 | None:intergenic |
| GCCAAATACAAGATATTCCG+TGG | 0.614406 | 8.4:-5906927 | MS.gene035692:CDS |
| ATTCTTGCCTTCGCTGCAGT+AGG | 0.614851 | 8.4:+5911170 | None:intergenic |
| TGACATACTGCATGTGAGCA+TGG | 0.614970 | 8.4:+5912188 | None:intergenic |
| CGGTGCCGACGTCGACGCCG+AGG | 0.618580 | 8.4:+5913696 | None:intergenic |
| GAGCTGTAGACCAAGCTGAA+AGG | 0.619207 | 8.4:-5913073 | MS.gene035692:CDS |
| TGCTCATGCTGGTGGCGTGG+GGG | 0.620437 | 8.4:-5910900 | MS.gene035692:CDS |
| CCCAGACTCTGTACTTCTGT+AGG | 0.620897 | 8.4:+5913296 | None:intergenic |
| CCAGAATATTGGCTTACTGA+AGG | 0.621883 | 8.4:-5909878 | MS.gene035692:CDS |
| CAACCTTCAGTTTCTGATGG+GGG | 0.623501 | 8.4:+5910863 | None:intergenic |
| GTAGAGCATTGTAATGCCCA+TGG | 0.624269 | 8.4:-5909331 | MS.gene035692:CDS |
| ATCAACACATTACTTGCATG+TGG | 0.626073 | 8.4:-5908991 | MS.gene035692:CDS |
| GAAATATAATAGCCTTAGGG+AGG | 0.627076 | 8.4:-5907713 | MS.gene035692:CDS |
| ACAACCTTCAGTTTCTGATG+GGG | 0.628160 | 8.4:+5910862 | None:intergenic |
| ATATGTCCATTTACAAACTG+TGG | 0.629492 | 8.4:+5912216 | None:intergenic |
| TTGATTGATGCTCATGCTGG+TGG | 0.633063 | 8.4:-5910908 | MS.gene035692:CDS |
| GGAGTAAGGCCAGAACCCAA+AGG | 0.635240 | 8.4:+5911191 | None:intergenic |
| GAAAGATGGTGCCTTTGTTG+AGG | 0.636370 | 8.4:-5913514 | MS.gene035692:intron |
| AACATGTAAATCTTCAGTCA+GGG | 0.637963 | 8.4:+5909585 | None:intergenic |
| CCTACAGAAGTACAGAGTCT+GGG | 0.640434 | 8.4:-5913296 | MS.gene035692:CDS |
| CGTATCCTCAGAGAATGACA+AGG | 0.648996 | 8.4:-5910766 | MS.gene035692:intron |
| TGATGCAGGCTTGTTTGATG+AGG | 0.653210 | 8.4:-5913580 | MS.gene035692:intron |
| CAAACAAGTTACCTCAACAA+AGG | 0.656353 | 8.4:+5913503 | None:intergenic |
| GCTGTTGTTCATAAAGGCCA+CGG | 0.660748 | 8.4:+5906910 | None:intergenic |
| AAGATGGAGCGAGAAGCAGA+AGG | 0.666509 | 8.4:+5913719 | None:intergenic |
| AACACATTACTTGCATGTGG+AGG | 0.667479 | 8.4:-5908988 | MS.gene035692:CDS |
| TTTCCATTGGAAGAATTACA+GGG | 0.672358 | 8.4:+5907785 | None:intergenic |
| CCTGTATTGGAATACTGTGG+TGG | 0.701824 | 8.4:-5913032 | MS.gene035692:CDS |
| AGATATGGAAGCTTGTGGGT+GGG | 0.708937 | 8.4:-5912149 | MS.gene035692:CDS |
| TCACCTGTATTGGAATACTG+TGG | 0.766102 | 8.4:-5913035 | MS.gene035692:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 5906872 | 5913759 | 5906872 | ID=MS.gene035692 |
| chr8.4 | mRNA | 5906872 | 5913759 | 5906872 | ID=MS.gene035692.t1;Parent=MS.gene035692 |
| chr8.4 | exon | 5913681 | 5913759 | 5913681 | ID=MS.gene035692.t1.exon1;Parent=MS.gene035692.t1 |
| chr8.4 | CDS | 5913681 | 5913759 | 5913681 | ID=cds.MS.gene035692.t1;Parent=MS.gene035692.t1 |
| chr8.4 | exon | 5913515 | 5913594 | 5913515 | ID=MS.gene035692.t1.exon2;Parent=MS.gene035692.t1 |
| chr8.4 | CDS | 5913515 | 5913594 | 5913515 | ID=cds.MS.gene035692.t1;Parent=MS.gene035692.t1 |
| chr8.4 | exon | 5913273 | 5913390 | 5913273 | ID=MS.gene035692.t1.exon3;Parent=MS.gene035692.t1 |
| chr8.4 | CDS | 5913273 | 5913390 | 5913273 | ID=cds.MS.gene035692.t1;Parent=MS.gene035692.t1 |
| chr8.4 | exon | 5913001 | 5913179 | 5913001 | ID=MS.gene035692.t1.exon4;Parent=MS.gene035692.t1 |
| chr8.4 | CDS | 5913001 | 5913179 | 5913001 | ID=cds.MS.gene035692.t1;Parent=MS.gene035692.t1 |
| chr8.4 | exon | 5912363 | 5912445 | 5912363 | ID=MS.gene035692.t1.exon5;Parent=MS.gene035692.t1 |
| chr8.4 | CDS | 5912363 | 5912445 | 5912363 | ID=cds.MS.gene035692.t1;Parent=MS.gene035692.t1 |
| chr8.4 | exon | 5912086 | 5912270 | 5912086 | ID=MS.gene035692.t1.exon6;Parent=MS.gene035692.t1 |
| chr8.4 | CDS | 5912086 | 5912270 | 5912086 | ID=cds.MS.gene035692.t1;Parent=MS.gene035692.t1 |
| chr8.4 | exon | 5911178 | 5911239 | 5911178 | ID=MS.gene035692.t1.exon7;Parent=MS.gene035692.t1 |
| chr8.4 | CDS | 5911178 | 5911239 | 5911178 | ID=cds.MS.gene035692.t1;Parent=MS.gene035692.t1 |
| chr8.4 | exon | 5910867 | 5910969 | 5910867 | ID=MS.gene035692.t1.exon8;Parent=MS.gene035692.t1 |
| chr8.4 | CDS | 5910867 | 5910969 | 5910867 | ID=cds.MS.gene035692.t1;Parent=MS.gene035692.t1 |
| chr8.4 | exon | 5910658 | 5910777 | 5910658 | ID=MS.gene035692.t1.exon9;Parent=MS.gene035692.t1 |
| chr8.4 | CDS | 5910658 | 5910777 | 5910658 | ID=cds.MS.gene035692.t1;Parent=MS.gene035692.t1 |
| chr8.4 | exon | 5909789 | 5909908 | 5909789 | ID=MS.gene035692.t1.exon10;Parent=MS.gene035692.t1 |
| chr8.4 | CDS | 5909789 | 5909908 | 5909789 | ID=cds.MS.gene035692.t1;Parent=MS.gene035692.t1 |
| chr8.4 | exon | 5909562 | 5909682 | 5909562 | ID=MS.gene035692.t1.exon11;Parent=MS.gene035692.t1 |
| chr8.4 | CDS | 5909562 | 5909682 | 5909562 | ID=cds.MS.gene035692.t1;Parent=MS.gene035692.t1 |
| chr8.4 | exon | 5909324 | 5909480 | 5909324 | ID=MS.gene035692.t1.exon12;Parent=MS.gene035692.t1 |
| chr8.4 | CDS | 5909324 | 5909480 | 5909324 | ID=cds.MS.gene035692.t1;Parent=MS.gene035692.t1 |
| chr8.4 | exon | 5908941 | 5909013 | 5908941 | ID=MS.gene035692.t1.exon13;Parent=MS.gene035692.t1 |
| chr8.4 | CDS | 5908941 | 5909013 | 5908941 | ID=cds.MS.gene035692.t1;Parent=MS.gene035692.t1 |
| chr8.4 | exon | 5907684 | 5907811 | 5907684 | ID=MS.gene035692.t1.exon14;Parent=MS.gene035692.t1 |
| chr8.4 | CDS | 5907684 | 5907811 | 5907684 | ID=cds.MS.gene035692.t1;Parent=MS.gene035692.t1 |
| chr8.4 | exon | 5906872 | 5906994 | 5906872 | ID=MS.gene035692.t1.exon15;Parent=MS.gene035692.t1 |
| chr8.4 | CDS | 5906872 | 5906994 | 5906872 | ID=cds.MS.gene035692.t1;Parent=MS.gene035692.t1 |
| Gene Sequence |
| Protein sequence |
