Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036059.t1 | XP_013468459.1 | 97.4 | 454 | 6 | 1 | 1 | 448 | 1 | 454 | 3.30E-257 | 897.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036059.t1 | Q8LPJ1 | 72.4 | 478 | 99 | 10 | 1 | 448 | 5 | 479 | 6.8e-187 | 654.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036059.t1 | A0A072VLK3 | 97.4 | 454 | 6 | 1 | 1 | 448 | 1 | 454 | 2.4e-257 | 897.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene036059 | MS.gene68906 | PPI |
| MS.gene036059 | MS.gene00289 | PPI |
| MS.gene036059 | MS.gene004548 | PPI |
| MS.gene52398 | MS.gene036059 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036059.t1 | MTR_1g069720 | 97.357 | 454 | 6 | 1 | 1 | 448 | 1 | 454 | 0.0 | 916 |
| MS.gene036059.t1 | MTR_7g097160 | 78.280 | 465 | 82 | 7 | 1 | 448 | 1 | 463 | 0.0 | 728 |
| MS.gene036059.t1 | MTR_1g075870 | 71.304 | 460 | 115 | 6 | 1 | 446 | 2 | 458 | 0.0 | 642 |
| MS.gene036059.t1 | MTR_1g042280 | 71.145 | 454 | 120 | 5 | 1 | 446 | 2 | 452 | 0.0 | 633 |
| MS.gene036059.t1 | MTR_1g075870 | 84.098 | 327 | 51 | 1 | 1 | 327 | 2 | 327 | 0.0 | 585 |
| MS.gene036059.t1 | MTR_2g099670 | 65.358 | 433 | 114 | 8 | 1 | 425 | 1 | 405 | 0.0 | 552 |
| MS.gene036059.t1 | MTR_4g126010 | 72.222 | 360 | 87 | 4 | 1 | 347 | 1 | 360 | 0.0 | 545 |
| MS.gene036059.t1 | MTR_8g018310 | 64.976 | 414 | 121 | 7 | 1 | 397 | 1 | 407 | 0.0 | 538 |
| MS.gene036059.t1 | MTR_8g018310 | 79.167 | 312 | 64 | 1 | 1 | 312 | 1 | 311 | 0.0 | 533 |
| MS.gene036059.t1 | MTR_0492s0030 | 68.011 | 372 | 110 | 4 | 1 | 370 | 1 | 365 | 0.0 | 515 |
| MS.gene036059.t1 | MTR_0543s0020 | 68.011 | 372 | 110 | 4 | 1 | 370 | 1 | 365 | 0.0 | 515 |
| MS.gene036059.t1 | MTR_2g039930 | 55.063 | 474 | 177 | 6 | 1 | 447 | 1 | 465 | 0.0 | 514 |
| MS.gene036059.t1 | MTR_1g042280 | 89.474 | 266 | 28 | 0 | 40 | 305 | 9 | 274 | 0.0 | 513 |
| MS.gene036059.t1 | MTR_6g087070 | 77.741 | 301 | 67 | 0 | 1 | 301 | 1 | 301 | 2.98e-179 | 508 |
| MS.gene036059.t1 | MTR_8g102930 | 77.181 | 298 | 68 | 0 | 1 | 298 | 1 | 298 | 3.06e-177 | 502 |
| MS.gene036059.t1 | MTR_1g075870 | 81.295 | 278 | 50 | 2 | 57 | 334 | 1 | 276 | 2.05e-171 | 482 |
| MS.gene036059.t1 | MTR_3g110180 | 55.582 | 421 | 171 | 4 | 1 | 417 | 1 | 409 | 4.05e-164 | 469 |
| MS.gene036059.t1 | MTR_3g110180 | 55.582 | 421 | 170 | 5 | 1 | 417 | 1 | 408 | 8.22e-163 | 466 |
| MS.gene036059.t1 | MTR_1g004990 | 70.508 | 295 | 87 | 0 | 1 | 295 | 1 | 295 | 1.60e-162 | 465 |
| MS.gene036059.t1 | MTR_2g099670 | 63.441 | 372 | 100 | 8 | 62 | 425 | 10 | 353 | 9.62e-158 | 453 |
| MS.gene036059.t1 | MTR_7g097160 | 71.429 | 322 | 73 | 7 | 144 | 448 | 25 | 344 | 1.24e-154 | 442 |
| MS.gene036059.t1 | MTR_2g039930 | 52.672 | 393 | 150 | 6 | 82 | 447 | 1 | 384 | 2.69e-135 | 394 |
| MS.gene036059.t1 | MTR_7g006030 | 37.716 | 289 | 161 | 6 | 5 | 277 | 31 | 316 | 1.19e-57 | 200 |
| MS.gene036059.t1 | MTR_3g110240 | 37.276 | 279 | 162 | 6 | 5 | 273 | 115 | 390 | 2.82e-54 | 192 |
| MS.gene036059.t1 | MTR_7g085540 | 36.525 | 282 | 163 | 5 | 9 | 277 | 147 | 425 | 4.48e-54 | 192 |
| MS.gene036059.t1 | MTR_1g007150 | 36.918 | 279 | 163 | 6 | 5 | 273 | 118 | 393 | 5.26e-54 | 191 |
| MS.gene036059.t1 | MTR_1g116210 | 36.268 | 284 | 167 | 6 | 5 | 277 | 113 | 393 | 1.49e-53 | 190 |
| MS.gene036059.t1 | MTR_8g014050 | 36.170 | 282 | 158 | 7 | 9 | 273 | 128 | 404 | 1.20e-49 | 179 |
| MS.gene036059.t1 | MTR_7g116400 | 62.687 | 67 | 24 | 1 | 80 | 145 | 1 | 67 | 7.67e-21 | 87.0 |
| MS.gene036059.t1 | MTR_7g106710 | 29.167 | 216 | 131 | 9 | 9 | 215 | 135 | 337 | 3.04e-14 | 74.7 |
| MS.gene036059.t1 | MTR_5g007590 | 45.333 | 75 | 33 | 1 | 71 | 145 | 53 | 119 | 3.62e-14 | 69.7 |
| MS.gene036059.t1 | MTR_5g022030 | 26.818 | 220 | 144 | 6 | 8 | 219 | 98 | 308 | 4.33e-14 | 74.7 |
| MS.gene036059.t1 | MTR_5g022030 | 26.818 | 220 | 144 | 6 | 8 | 219 | 98 | 308 | 4.90e-14 | 74.3 |
| MS.gene036059.t1 | MTR_7g106710 | 29.167 | 216 | 131 | 9 | 9 | 215 | 135 | 337 | 6.59e-14 | 73.9 |
| MS.gene036059.t1 | MTR_7g106710 | 29.167 | 216 | 131 | 9 | 9 | 215 | 135 | 337 | 7.87e-14 | 73.9 |
| MS.gene036059.t1 | MTR_4g128820 | 29.630 | 216 | 128 | 7 | 7 | 213 | 8 | 208 | 8.83e-14 | 73.6 |
| MS.gene036059.t1 | MTR_7g106710 | 29.167 | 216 | 131 | 9 | 9 | 215 | 135 | 337 | 1.22e-13 | 73.6 |
| MS.gene036059.t1 | MTR_3g466480 | 29.817 | 218 | 133 | 9 | 5 | 214 | 17 | 222 | 1.20e-12 | 69.7 |
| MS.gene036059.t1 | MTR_7g073520 | 34.375 | 128 | 70 | 4 | 109 | 236 | 252 | 365 | 2.63e-12 | 68.9 |
| MS.gene036059.t1 | MTR_1g026190 | 28.030 | 264 | 151 | 10 | 9 | 251 | 78 | 323 | 3.50e-12 | 68.6 |
| MS.gene036059.t1 | MTR_7g106730 | 26.522 | 230 | 142 | 8 | 9 | 228 | 88 | 300 | 9.85e-12 | 67.0 |
| MS.gene036059.t1 | MTR_5g092815 | 26.609 | 233 | 148 | 8 | 9 | 233 | 91 | 308 | 1.05e-11 | 66.6 |
| MS.gene036059.t1 | MTR_3g099920 | 28.017 | 232 | 107 | 9 | 9 | 213 | 19 | 217 | 3.61e-11 | 65.5 |
| MS.gene036059.t1 | MTR_8g079790 | 27.948 | 229 | 139 | 10 | 6 | 219 | 122 | 339 | 3.82e-11 | 65.5 |
| MS.gene036059.t1 | MTR_5g092810 | 27.488 | 211 | 137 | 6 | 9 | 213 | 92 | 292 | 4.05e-11 | 65.5 |
| MS.gene036059.t1 | MTR_1g098300 | 28.302 | 212 | 127 | 9 | 9 | 209 | 126 | 323 | 4.42e-11 | 65.5 |
| MS.gene036059.t1 | MTR_4g132860 | 25.887 | 282 | 179 | 10 | 11 | 281 | 82 | 344 | 6.46e-11 | 64.3 |
| MS.gene036059.t1 | MTR_8g099095 | 29.437 | 231 | 134 | 11 | 9 | 228 | 66 | 278 | 9.27e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036059.t1 | AT4G28540 | 72.385 | 478 | 99 | 10 | 1 | 448 | 5 | 479 | 0.0 | 679 |
| MS.gene036059.t1 | AT4G14340 | 70.861 | 453 | 116 | 7 | 1 | 446 | 7 | 450 | 0.0 | 643 |
| MS.gene036059.t1 | AT3G23340 | 71.938 | 449 | 110 | 7 | 1 | 446 | 1 | 436 | 0.0 | 642 |
| MS.gene036059.t1 | AT5G43320 | 67.579 | 475 | 124 | 7 | 1 | 446 | 1 | 474 | 0.0 | 627 |
| MS.gene036059.t1 | AT1G03930 | 68.354 | 474 | 121 | 8 | 1 | 448 | 1 | 471 | 0.0 | 626 |
| MS.gene036059.t1 | AT3G23340 | 69.265 | 449 | 108 | 8 | 1 | 446 | 1 | 422 | 0.0 | 609 |
| MS.gene036059.t1 | AT1G04440 | 66.164 | 464 | 137 | 8 | 1 | 446 | 1 | 462 | 0.0 | 600 |
| MS.gene036059.t1 | AT5G44100 | 82.000 | 350 | 58 | 2 | 1 | 346 | 1 | 349 | 0.0 | 597 |
| MS.gene036059.t1 | AT5G44100 | 82.000 | 350 | 58 | 2 | 1 | 346 | 1 | 349 | 0.0 | 597 |
| MS.gene036059.t1 | AT4G14340 | 83.537 | 328 | 53 | 1 | 1 | 328 | 7 | 333 | 0.0 | 576 |
| MS.gene036059.t1 | AT5G43320 | 81.024 | 332 | 60 | 1 | 1 | 329 | 1 | 332 | 0.0 | 565 |
| MS.gene036059.t1 | AT5G43320 | 81.024 | 332 | 60 | 1 | 1 | 329 | 1 | 332 | 0.0 | 565 |
| MS.gene036059.t1 | AT1G72710 | 75.152 | 330 | 79 | 2 | 1 | 328 | 1 | 329 | 0.0 | 536 |
| MS.gene036059.t1 | AT4G26100 | 80.872 | 298 | 57 | 0 | 1 | 298 | 1 | 298 | 0.0 | 535 |
| MS.gene036059.t1 | AT5G57015 | 80.537 | 298 | 58 | 0 | 1 | 298 | 1 | 298 | 0.0 | 529 |
| MS.gene036059.t1 | AT2G19470 | 73.556 | 329 | 84 | 3 | 1 | 326 | 1 | 329 | 0.0 | 524 |
| MS.gene036059.t1 | AT4G28880 | 59.611 | 411 | 153 | 2 | 1 | 406 | 1 | 403 | 3.28e-176 | 499 |
| MS.gene036059.t1 | AT4G28880 | 59.611 | 411 | 153 | 2 | 1 | 406 | 1 | 403 | 3.28e-176 | 499 |
| MS.gene036059.t1 | AT4G28880 | 59.611 | 411 | 153 | 2 | 1 | 406 | 1 | 403 | 3.28e-176 | 499 |
| MS.gene036059.t1 | AT4G28880 | 59.611 | 411 | 153 | 2 | 1 | 406 | 1 | 403 | 3.28e-176 | 499 |
| MS.gene036059.t1 | AT4G28860 | 70.533 | 319 | 94 | 0 | 1 | 319 | 1 | 319 | 7.97e-175 | 494 |
| MS.gene036059.t1 | AT4G28860 | 74.832 | 298 | 75 | 0 | 1 | 298 | 1 | 298 | 1.78e-174 | 495 |
| MS.gene036059.t1 | AT4G08800 | 66.216 | 296 | 68 | 2 | 1 | 296 | 1 | 264 | 3.33e-145 | 416 |
| MS.gene036059.t1 | AT2G25760 | 39.286 | 280 | 155 | 4 | 9 | 273 | 107 | 386 | 6.92e-59 | 205 |
| MS.gene036059.t1 | AT2G25760 | 38.929 | 280 | 153 | 5 | 9 | 273 | 107 | 383 | 3.55e-56 | 197 |
| MS.gene036059.t1 | AT3G13670 | 35.986 | 289 | 166 | 6 | 5 | 277 | 131 | 416 | 3.66e-53 | 189 |
| MS.gene036059.t1 | AT5G18190 | 35.461 | 282 | 166 | 5 | 9 | 277 | 130 | 408 | 1.89e-52 | 187 |
| MS.gene036059.t1 | AT5G18190 | 35.461 | 282 | 166 | 5 | 9 | 277 | 130 | 408 | 1.89e-52 | 187 |
| MS.gene036059.t1 | AT3G03940 | 35.461 | 282 | 166 | 5 | 9 | 277 | 140 | 418 | 4.16e-52 | 186 |
| MS.gene036059.t1 | AT3G50530 | 28.319 | 226 | 141 | 7 | 5 | 219 | 144 | 359 | 1.04e-13 | 73.6 |
| MS.gene036059.t1 | AT5G21326 | 29.870 | 231 | 113 | 10 | 7 | 214 | 11 | 215 | 3.39e-13 | 71.6 |
| MS.gene036059.t1 | AT1G30270 | 27.386 | 241 | 147 | 10 | 7 | 236 | 29 | 252 | 5.82e-12 | 67.8 |
| MS.gene036059.t1 | AT2G17890 | 25.909 | 220 | 146 | 7 | 8 | 219 | 107 | 317 | 5.89e-12 | 68.2 |
| MS.gene036059.t1 | AT3G20410 | 28.384 | 229 | 143 | 8 | 9 | 230 | 91 | 305 | 5.99e-12 | 68.2 |
| MS.gene036059.t1 | AT3G20410 | 28.384 | 229 | 143 | 8 | 9 | 230 | 91 | 305 | 5.99e-12 | 68.2 |
| MS.gene036059.t1 | AT1G30270 | 27.386 | 241 | 147 | 10 | 7 | 236 | 29 | 252 | 6.46e-12 | 67.8 |
| MS.gene036059.t1 | AT2G38910 | 28.063 | 253 | 144 | 10 | 1 | 230 | 119 | 356 | 1.11e-11 | 67.4 |
| MS.gene036059.t1 | AT3G50530 | 26.104 | 249 | 148 | 9 | 5 | 219 | 144 | 390 | 1.27e-11 | 67.0 |
| MS.gene036059.t1 | AT4G36070 | 25.000 | 220 | 148 | 6 | 8 | 219 | 70 | 280 | 1.56e-11 | 66.6 |
| MS.gene036059.t1 | AT4G36070 | 25.000 | 220 | 148 | 6 | 8 | 219 | 70 | 280 | 1.58e-11 | 66.6 |
| MS.gene036059.t1 | AT3G61960 | 24.843 | 318 | 204 | 10 | 7 | 318 | 8 | 296 | 1.87e-11 | 66.6 |
| MS.gene036059.t1 | AT3G61960 | 24.843 | 318 | 204 | 10 | 7 | 318 | 8 | 296 | 1.90e-11 | 66.6 |
| MS.gene036059.t1 | AT1G29230 | 27.397 | 219 | 141 | 9 | 2 | 213 | 67 | 274 | 2.79e-11 | 65.9 |
| MS.gene036059.t1 | AT1G01140 | 28.689 | 244 | 140 | 13 | 7 | 236 | 17 | 240 | 2.94e-11 | 65.5 |
| MS.gene036059.t1 | AT4G31170 | 28.319 | 226 | 128 | 8 | 8 | 218 | 130 | 336 | 2.97e-11 | 65.5 |
| MS.gene036059.t1 | AT4G31170 | 28.319 | 226 | 128 | 8 | 8 | 218 | 130 | 336 | 2.97e-11 | 65.5 |
| MS.gene036059.t1 | AT4G31170 | 28.319 | 226 | 128 | 8 | 8 | 218 | 130 | 336 | 2.97e-11 | 65.5 |
| MS.gene036059.t1 | AT4G31170 | 28.319 | 226 | 128 | 8 | 8 | 218 | 130 | 336 | 2.97e-11 | 65.5 |
| MS.gene036059.t1 | AT4G31170 | 28.319 | 226 | 128 | 8 | 8 | 218 | 130 | 336 | 2.97e-11 | 65.5 |
| MS.gene036059.t1 | AT4G31170 | 28.319 | 226 | 128 | 8 | 8 | 218 | 130 | 336 | 2.97e-11 | 65.5 |
| MS.gene036059.t1 | AT4G31170 | 28.319 | 226 | 128 | 8 | 8 | 218 | 130 | 336 | 2.97e-11 | 65.5 |
| MS.gene036059.t1 | AT1G01140 | 28.689 | 244 | 140 | 13 | 7 | 236 | 17 | 240 | 3.21e-11 | 65.5 |
| MS.gene036059.t1 | AT1G50700 | 25.597 | 293 | 192 | 10 | 9 | 293 | 73 | 347 | 4.53e-11 | 65.1 |
| MS.gene036059.t1 | AT1G76040 | 28.037 | 214 | 136 | 7 | 9 | 215 | 112 | 314 | 4.82e-11 | 65.1 |
| MS.gene036059.t1 | AT1G76040 | 27.586 | 232 | 147 | 8 | 9 | 233 | 112 | 329 | 4.84e-11 | 65.1 |
| MS.gene036059.t1 | AT4G23650 | 29.167 | 216 | 131 | 7 | 9 | 215 | 78 | 280 | 6.43e-11 | 64.7 |
| MS.gene036059.t1 | AT1G50700 | 25.597 | 293 | 192 | 10 | 9 | 293 | 73 | 347 | 6.70e-11 | 64.7 |
| MS.gene036059.t1 | AT4G04720 | 23.052 | 308 | 201 | 9 | 2 | 293 | 66 | 353 | 8.26e-11 | 64.3 |
| MS.gene036059.t1 | AT4G04720 | 23.052 | 308 | 201 | 9 | 2 | 293 | 66 | 353 | 8.26e-11 | 64.3 |
| MS.gene036059.t1 | AT1G50700 | 25.357 | 280 | 184 | 9 | 9 | 281 | 73 | 334 | 9.73e-11 | 64.3 |
Find 123 sgRNAs with CRISPR-Local
Find 388 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAAACTTGGAAGGAAAAT+TGG | 0.141980 | 1.4:-56571164 | MS.gene036059:CDS |
| TAGAATTTGCGCGGTTCCTC+TGG | 0.208716 | 1.4:+56566042 | None:intergenic |
| GAATGGTCACCTGAGGAATT+TGG | 0.252408 | 1.4:+56565497 | None:intergenic |
| CCGACTTCAAAGTGAATTTC+CGG | 0.284081 | 1.4:+56570301 | None:intergenic |
| AAAATTGGGAGTGGCTCTTT+TGG | 0.284578 | 1.4:-56571149 | MS.gene036059:CDS |
| CAATTCATAATTACCTCTAT+TGG | 0.295962 | 1.4:+56567262 | None:intergenic |
| ACATACCTTCTCGAATAAAA+AGG | 0.309439 | 1.4:+56566602 | None:intergenic |
| CTCTTTAAATATGAATAATC+TGG | 0.309704 | 1.4:+56566637 | None:intergenic |
| TTCAGTTGGGAGAGAGATTC+GGG | 0.311421 | 1.4:-56566099 | MS.gene036059:intron |
| ATGTGCTAATGTATTTCTTA+AGG | 0.316233 | 1.4:-56567447 | MS.gene036059:CDS |
| ATTTATTCAATTACTGTAAC+CGG | 0.344610 | 1.4:-56570320 | MS.gene036059:CDS |
| CAACACAATTCAACTCGATA+TGG | 0.357353 | 1.4:-56565554 | MS.gene036059:CDS |
| CATAGCGTGCCGTGCCTGTA+AGG | 0.359631 | 1.4:+56567656 | None:intergenic |
| AATTCCTCAGGTGACCATTC+TGG | 0.359748 | 1.4:-56565494 | MS.gene036059:CDS |
| TTAAACTTGGAAGGAAAATT+GGG | 0.363410 | 1.4:-56571163 | MS.gene036059:CDS |
| TCCAGCCCTCAGTCCTTGCC+AGG | 0.368539 | 1.4:+56567333 | None:intergenic |
| AGGGAAAATAAGAACCTTAC+AGG | 0.372840 | 1.4:-56567670 | MS.gene036059:CDS |
| TGTGCTAATGTATTTCTTAA+GGG | 0.382905 | 1.4:-56567446 | MS.gene036059:CDS |
| TTTCAGTTGGGAGAGAGATT+CGG | 0.387170 | 1.4:-56566100 | MS.gene036059:intron |
| CGACCTTCTTGGACCCAGTC+TGG | 0.390528 | 1.4:-56570346 | MS.gene036059:CDS |
| GTGATGGTCATCGACCTTCT+TGG | 0.394243 | 1.4:-56570357 | MS.gene036059:CDS |
| ATGATTCTTCAAGGAGGAAC+TGG | 0.404829 | 1.4:-56570423 | MS.gene036059:CDS |
| ACCTCAACGAACGGCAATAG+TGG | 0.405356 | 1.4:+56566671 | None:intergenic |
| CCTCAACTCCAAACCATTTG+AGG | 0.409202 | 1.4:+56570391 | None:intergenic |
| GCTTTGAGCTCCTCACTATC+AGG | 0.414666 | 1.4:-56565346 | MS.gene036059:CDS |
| GAGATTCGGGAGAAATTATC+TGG | 0.415618 | 1.4:-56566086 | MS.gene036059:CDS |
| CTCAAATGGTTTGGAGTTGA+GGG | 0.423483 | 1.4:-56570390 | MS.gene036059:CDS |
| TCAGCTGTTAATATACAAAC+TGG | 0.426788 | 1.4:-56570999 | MS.gene036059:intron |
| GCAAGTGTCAACACTCATCT+TGG | 0.429797 | 1.4:-56567634 | MS.gene036059:CDS |
| ATAGGGATCTTCAGACTCAT+AGG | 0.434481 | 1.4:-56567991 | MS.gene036059:CDS |
| TTTATCATGGATCATGTGAT+TGG | 0.443086 | 1.4:-56571194 | None:intergenic |
| CCTCAAATGGTTTGGAGTTG+AGG | 0.448526 | 1.4:-56570391 | MS.gene036059:CDS |
| TTGCCGTTCGTTGAGGTTTG+AGG | 0.451388 | 1.4:-56566665 | MS.gene036059:CDS |
| ATATCGAGTTGAATTGTGTT+GGG | 0.458129 | 1.4:+56565556 | None:intergenic |
| ACAAAGTCGAAGGGATGATC+TGG | 0.458546 | 1.4:-56567482 | MS.gene036059:CDS |
| TTTCGCAAGGCCGAAGTCAA+TGG | 0.458863 | 1.4:+56568018 | None:intergenic |
| CATAAAGCACAAAAGATTCC+AGG | 0.463717 | 1.4:-56566305 | MS.gene036059:intron |
| AAACTGTATATGATTCTTCA+AGG | 0.471640 | 1.4:-56570432 | MS.gene036059:CDS |
| GTGGAAAGTTTAAACTTGGA+AGG | 0.472881 | 1.4:-56571172 | MS.gene036059:CDS |
| CTCCAAACCATTTGAGGTGG+GGG | 0.473526 | 1.4:+56570397 | None:intergenic |
| ATTGAATAAATCTTCCAGAC+TGG | 0.475781 | 1.4:+56570332 | None:intergenic |
| GTCAACACTCATCTTGGAAT+CGG | 0.482999 | 1.4:-56567628 | MS.gene036059:intron |
| GGCAGGATGGCCACAAGTGG+GGG | 0.486821 | 1.4:-56565473 | MS.gene036059:CDS |
| ATAGTGAAGCTGTGGATGCC+TGG | 0.493685 | 1.4:+56570461 | None:intergenic |
| TCTTCCCTGGCAAGGACTGA+GGG | 0.499281 | 1.4:-56567338 | MS.gene036059:CDS |
| TTGTGGCCATCCTGCCAGAA+TGG | 0.501550 | 1.4:+56565480 | None:intergenic |
| CCCTGGCAAGGACTGAGGGC+TGG | 0.502421 | 1.4:-56567334 | MS.gene036059:CDS |
| ATCATCATAAGTCCTATGTC+TGG | 0.505727 | 1.4:+56565998 | None:intergenic |
| CATATCGAGTTGAATTGTGT+TGG | 0.505789 | 1.4:+56565555 | None:intergenic |
| ATTGGTGGAAAGTTTAAACT+TGG | 0.508093 | 1.4:-56571176 | MS.gene036059:CDS |
| AGAGGAGGTGGCTGTTAAGC+TGG | 0.511655 | 1.4:-56570976 | MS.gene036059:intron |
| CAGGTGTATGCCATTGACTT+CGG | 0.512497 | 1.4:-56568028 | MS.gene036059:CDS |
| AGAATTTGCGCGGTTCCTCT+GGG | 0.513807 | 1.4:+56566043 | None:intergenic |
| CTGGCAGGATGGCCACAAGT+GGG | 0.513957 | 1.4:-56565475 | MS.gene036059:CDS |
| AGGGATGATCTGGAATCTCT+TGG | 0.515030 | 1.4:-56567472 | MS.gene036059:CDS |
| GAAGGTATCAACTCCAATAG+AGG | 0.515426 | 1.4:-56567275 | MS.gene036059:intron |
| GTCTTCCCTGGCAAGGACTG+AGG | 0.516641 | 1.4:-56567339 | MS.gene036059:CDS |
| AATTGTCTGGCTTTATGTCT+CGG | 0.521040 | 1.4:+56570111 | None:intergenic |
| TCCACTATTGCCGTTCGTTG+AGG | 0.522705 | 1.4:-56566672 | MS.gene036059:CDS |
| CAGAGTAGTGGCAGCTCTAG+AGG | 0.523385 | 1.4:-56566447 | MS.gene036059:CDS |
| AGGCCCATCAGAAAATTGTC+TGG | 0.529417 | 1.4:+56570098 | None:intergenic |
| AACTCCAAACCATTTGAGGT+GGG | 0.533255 | 1.4:+56570395 | None:intergenic |
| TGGCAGGATGGCCACAAGTG+GGG | 0.534769 | 1.4:-56565474 | MS.gene036059:CDS |
| CTTGATTTGCTTTACGTCCG+AGG | 0.536022 | 1.4:+56570078 | None:intergenic |
| TTGTAACGACAGCATGGCAC+TGG | 0.538838 | 1.4:-56566359 | MS.gene036059:intron |
| ATCATGGATCATGTGATTGG+TGG | 0.540398 | 1.4:-56571191 | MS.gene036059:CDS |
| TATACAAACTGGAGAGGAGG+TGG | 0.543406 | 1.4:-56570988 | MS.gene036059:CDS |
| TAATGTATTTCTTAAGGGGA+AGG | 0.544863 | 1.4:-56567441 | MS.gene036059:intron |
| TTGAATAAATCTTCCAGACT+GGG | 0.547330 | 1.4:+56570333 | None:intergenic |
| GTGCTAATGTATTTCTTAAG+GGG | 0.552945 | 1.4:-56567445 | MS.gene036059:CDS |
| TAGTGGCAGCTCTAGAGGAC+GGG | 0.553447 | 1.4:-56566442 | MS.gene036059:intron |
| TCTGGCAGGATGGCCACAAG+TGG | 0.554722 | 1.4:-56565476 | MS.gene036059:CDS |
| GTAGTGGCAGCTCTAGAGGA+CGG | 0.557752 | 1.4:-56566443 | MS.gene036059:CDS |
| GTTGAATACATGCATTCAAG+AGG | 0.558652 | 1.4:-56570143 | MS.gene036059:CDS |
| TCATCAAAGCCAAATTCCTC+AGG | 0.559975 | 1.4:-56565506 | MS.gene036059:CDS |
| CAACTCCAAACCATTTGAGG+TGG | 0.572196 | 1.4:+56570394 | None:intergenic |
| TCCAGGAATCTGTGAAGACC+AGG | 0.574379 | 1.4:-56570479 | MS.gene036059:intron |
| CCTCAGGTGACCATTCTGGC+AGG | 0.574601 | 1.4:-56565490 | MS.gene036059:CDS |
| AGGTGACCATTCTGGCAGGA+TGG | 0.577708 | 1.4:-56565486 | MS.gene036059:CDS |
| CTCATAGGCACATACCGTAC+AGG | 0.580718 | 1.4:-56567976 | MS.gene036059:intron |
| CTCTATGTGCACCAGATGGA+CGG | 0.581552 | 1.4:+56565450 | None:intergenic |
| GATATGGAAGCAGTTCAAGA+AGG | 0.582141 | 1.4:-56565538 | MS.gene036059:CDS |
| GCTCGCAGTGGGTCTATGAG+AGG | 0.584728 | 1.4:-56565392 | MS.gene036059:CDS |
| CTTCCAGACTGGGTCCAAGA+AGG | 0.585280 | 1.4:+56570343 | None:intergenic |
| GATCACAAAACCAACCTGTA+CGG | 0.586380 | 1.4:+56567962 | None:intergenic |
| GAGATTACTTCCTGATAGTG+AGG | 0.590566 | 1.4:+56565336 | None:intergenic |
| CCAGCCCTCAGTCCTTGCCA+GGG | 0.593406 | 1.4:+56567334 | None:intergenic |
| ACTCCAAACCATTTGAGGTG+GGG | 0.595250 | 1.4:+56570396 | None:intergenic |
| ATTTGGCTTTGATGATACCA+TGG | 0.595993 | 1.4:+56565514 | None:intergenic |
| GCAAATTCTAGCCCTCATCA+TGG | 0.597335 | 1.4:-56566029 | MS.gene036059:CDS |
| TGGTGGCAGAACAAAGTCGA+AGG | 0.597531 | 1.4:-56567492 | MS.gene036059:intron |
| GCTTGTTTCGTATCATACAC+AGG | 0.597643 | 1.4:+56565422 | None:intergenic |
| TGGTGTGTTCACCATGATGA+GGG | 0.598433 | 1.4:+56566018 | None:intergenic |
| ATATGGAAGCAGTTCAAGAA+GGG | 0.599037 | 1.4:-56565537 | MS.gene036059:CDS |
| ATGGTGAACACACCAGACAT+AGG | 0.599179 | 1.4:-56566010 | MS.gene036059:CDS |
| CCGGAAATTCACTTTGAAGT+CGG | 0.603149 | 1.4:-56570301 | MS.gene036059:CDS |
| CTGGTGTGTTCACCATGATG+AGG | 0.607155 | 1.4:+56566017 | None:intergenic |
| AGACAGACTTACTAATTGAT+CGG | 0.609374 | 1.4:+56570266 | None:intergenic |
| AGGAGCTCAAAGCTCCTCAG+AGG | 0.611695 | 1.4:+56565356 | None:intergenic |
| AAGCAGTTCAAGAAGGGCCA+TGG | 0.612324 | 1.4:-56565531 | MS.gene036059:CDS |
| ACATAGGACTTATGATGATG+TGG | 0.615199 | 1.4:-56565994 | MS.gene036059:intron |
| ACGACAGCATGGCACTGGCA+AGG | 0.615258 | 1.4:-56566354 | MS.gene036059:intron |
| CTTGGAAGGAAAATTGGGAG+TGG | 0.615747 | 1.4:-56571158 | MS.gene036059:CDS |
| TTGAAGTATCCACAGAGTAG+TGG | 0.619683 | 1.4:-56566459 | MS.gene036059:CDS |
| TTTGACTCATAGTGAAGCTG+TGG | 0.620621 | 1.4:+56570453 | None:intergenic |
| CGATAAAATCAGTGAGACGA+AGG | 0.621170 | 1.4:-56567293 | MS.gene036059:CDS |
| TGAACTCTATGTGCACCAGA+TGG | 0.622235 | 1.4:+56565446 | None:intergenic |
| TGTCCTCAAACCTCAACGAA+CGG | 0.628598 | 1.4:+56566662 | None:intergenic |
| TGAGGGAGAGTACAATGTGA+TGG | 0.631924 | 1.4:-56570373 | MS.gene036059:CDS |
| AAATAAGAACCTTACAGGCA+CGG | 0.632067 | 1.4:-56567665 | MS.gene036059:CDS |
| TAATATACAAACTGGAGAGG+AGG | 0.635465 | 1.4:-56570991 | MS.gene036059:CDS |
| GATGAGGGCTAGAATTTGCG+CGG | 0.638446 | 1.4:+56566033 | None:intergenic |
| CTAGAGCTGCCACTACTCTG+TGG | 0.650464 | 1.4:+56566450 | None:intergenic |
| AAGTATGATACAAACTCAGA+GGG | 0.655305 | 1.4:+56566694 | None:intergenic |
| TGTTAATATACAAACTGGAG+AGG | 0.660638 | 1.4:-56570994 | MS.gene036059:CDS |
| GAAGTATGATACAAACTCAG+AGG | 0.660966 | 1.4:+56566693 | None:intergenic |
| GGTGGCAGAACAAAGTCGAA+GGG | 0.669079 | 1.4:-56567491 | MS.gene036059:intron |
| TTGTTGAAGCATTCACCCAG+AGG | 0.669158 | 1.4:-56566058 | MS.gene036059:CDS |
| CCTGCCAGAATGGTCACCTG+AGG | 0.679602 | 1.4:+56565490 | None:intergenic |
| AGCTCCTCAGAGGATCATCA+CGG | 0.696325 | 1.4:+56565366 | None:intergenic |
| GCCACCGTGATGATCCTCTG+AGG | 0.725239 | 1.4:-56565370 | MS.gene036059:CDS |
| CTGTATATGATTCTTCAAGG+AGG | 0.728537 | 1.4:-56570429 | MS.gene036059:CDS |
| TCCTCAGAGGATCATCACGG+TGG | 0.751052 | 1.4:+56565369 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGAATTATTACATTATT+AGG | - | chr1.4:56568977-56568996 | MS.gene036059:intron | 10.0% |
| !! | ATGAATTAAAAACAAAAAAA+AGG | + | chr1.4:56565437-56565456 | None:intergenic | 10.0% |
| !! | ATTAAATATAAGAAAATCTT+GGG | - | chr1.4:56566835-56566854 | MS.gene036059:intron | 10.0% |
| !! | TAATCATATATAGATAATTT+AGG | + | chr1.4:56566587-56566606 | None:intergenic | 10.0% |
| !! | TGAATTAAAAACAAAAAAAA+GGG | + | chr1.4:56565436-56565455 | None:intergenic | 10.0% |
| !!! | TACTTTTCATTTTTAAATTA+TGG | - | chr1.4:56569512-56569531 | MS.gene036059:intron | 10.0% |
| !!! | TGTTTTTAATTCATTTATTT+GGG | - | chr1.4:56565443-56565462 | MS.gene036059:CDS | 10.0% |
| !!! | TTGTTTTTAATTCATTTATT+TGG | - | chr1.4:56565442-56565461 | MS.gene036059:CDS | 10.0% |
| !!! | TTTATGAAAATAACATTTTA+GGG | + | chr1.4:56569709-56569728 | None:intergenic | 10.0% |
| !!! | TTTTAGATTTGTAAATAAAA+CGG | + | chr1.4:56570767-56570786 | None:intergenic | 10.0% |
| !!! | TTTTATGAAAATAACATTTT+AGG | + | chr1.4:56569710-56569729 | None:intergenic | 10.0% |
| !! | AAAAACATAATAGCTTAAAA+TGG | + | chr1.4:56566662-56566681 | None:intergenic | 15.0% |
| !! | AAAACATAATAGCTTAAAAT+GGG | + | chr1.4:56566661-56566680 | None:intergenic | 15.0% |
| !! | AATTAAAACAATATCAAACT+TGG | - | chr1.4:56568776-56568795 | MS.gene036059:intron | 15.0% |
| !! | CTAAAATATTATCTACATTT+AGG | + | chr1.4:56568748-56568767 | None:intergenic | 15.0% |
| !! | GATTAAATATAAGAAAATCT+TGG | - | chr1.4:56566834-56566853 | MS.gene036059:intron | 15.0% |
| !! | TAATATGGTTCTTTATATAA+TGG | - | chr1.4:56566310-56566329 | MS.gene036059:CDS | 15.0% |
| !! | TATTATATTGATATTGATAG+CGG | - | chr1.4:56567424-56567443 | MS.gene036059:intron | 15.0% |
| !!! | ATGTTTTAAATGTTAACTTT+TGG | - | chr1.4:56565775-56565794 | MS.gene036059:intron | 15.0% |
| !!! | CATAGTAATATTTACTTTTT+GGG | - | chr1.4:56567882-56567901 | MS.gene036059:intron | 15.0% |
| !!! | TACAAAATGAAGTATTTTAA+AGG | + | chr1.4:56568228-56568247 | None:intergenic | 15.0% |
| !!! | TCATAGTAATATTTACTTTT+TGG | - | chr1.4:56567881-56567900 | MS.gene036059:intron | 15.0% |
| !!! | TTGTTTTTTTACATTTTTGT+TGG | - | chr1.4:56570130-56570149 | MS.gene036059:CDS | 15.0% |
| !!! | TTTTATTTTATGAATGTGAT+AGG | - | chr1.4:56568362-56568381 | MS.gene036059:intron | 15.0% |
| !! | AAAAAAAAAATGATAGATGC+AGG | + | chr1.4:56569296-56569315 | None:intergenic | 20.0% |
| !! | AATGATTTCCAGTAAAAAAA+TGG | + | chr1.4:56568724-56568743 | None:intergenic | 20.0% |
| !! | ACAAAATATATTGAGATCAA+TGG | + | chr1.4:56568814-56568833 | None:intergenic | 20.0% |
| !! | AGCAATTATTAAGCAATATA+AGG | + | chr1.4:56568646-56568665 | None:intergenic | 20.0% |
| !! | ATATTTACAAATGGTAAACA+AGG | + | chr1.4:56570704-56570723 | None:intergenic | 20.0% |
| !! | ATTTATTCAATTACTGTAAC+CGG | - | chr1.4:56566208-56566227 | MS.gene036059:intron | 20.0% |
| !! | CAAAATATATTGAGATCAAT+GGG | + | chr1.4:56568813-56568832 | None:intergenic | 20.0% |
| !! | CTAGTACAAATATTTACAAA+TGG | + | chr1.4:56570713-56570732 | None:intergenic | 20.0% |
| !! | CTCTTTAAATATGAATAATC+TGG | + | chr1.4:56569894-56569913 | None:intergenic | 20.0% |
| !! | GATATTATCTTAACTCTTTA+GGG | - | chr1.4:56565687-56565706 | MS.gene036059:intron | 20.0% |
| !! | TTATGTGAAAAAACATGAAA+TGG | + | chr1.4:56570659-56570678 | None:intergenic | 20.0% |
| !!! | AAGCTATTATGTTTTTTCTT+TGG | - | chr1.4:56566666-56566685 | MS.gene036059:CDS | 20.0% |
| !!! | AGTATTTTAAAGGATACAAA+TGG | + | chr1.4:56568218-56568237 | None:intergenic | 20.0% |
| !!! | ATATTTTTCTTCTTTGCTTA+GGG | - | chr1.4:56568839-56568858 | MS.gene036059:intron | 20.0% |
| !!! | ATCATATGAAGTTTTCAAAT+GGG | - | chr1.4:56570592-56570611 | MS.gene036059:intron | 20.0% |
| !!! | GTTTCTTGTTTATTAGAAAT+TGG | - | chr1.4:56569357-56569376 | MS.gene036059:intron | 20.0% |
| !!! | TCTATAGATAATTCTTTTCT+AGG | + | chr1.4:56566617-56566636 | None:intergenic | 20.0% |
| !!! | TCTTTATTTATATCAAAGAC+AGG | + | chr1.4:56567648-56567667 | None:intergenic | 20.0% |
| !!! | TTACGTGCTTTTATAAAAAT+AGG | - | chr1.4:56569794-56569813 | MS.gene036059:intron | 20.0% |
| !!! | TTTCATGAATTTCTAGAATT+TGG | - | chr1.4:56565623-56565642 | MS.gene036059:intron | 20.0% |
| !!! | TTTTTTTTGTTATCAGTTAG+TGG | - | chr1.4:56565960-56565979 | MS.gene036059:intron | 20.0% |
| ! | AAACTGTATATGATTCTTCA+AGG | - | chr1.4:56566096-56566115 | MS.gene036059:CDS | 25.0% |
| ! | AATGGTAAACAAGGTAAAAA+TGG | + | chr1.4:56570695-56570714 | None:intergenic | 25.0% |
| ! | AGAGTCTAAATAGGAATAAA+TGG | - | chr1.4:56566768-56566787 | MS.gene036059:intron | 25.0% |
| ! | AGCTGAATAAGAATGAAATT+CGG | - | chr1.4:56570259-56570278 | MS.gene036059:intron | 25.0% |
| ! | ATAACATCAAAATACAAGCT+TGG | - | chr1.4:56567699-56567718 | MS.gene036059:intron | 25.0% |
| ! | ATATACTAATTGTGTGATTG+TGG | - | chr1.4:56569016-56569035 | MS.gene036059:intron | 25.0% |
| ! | ATATCATTTATCGAAGGAAA+TGG | - | chr1.4:56565744-56565763 | MS.gene036059:intron | 25.0% |
| ! | ATGAAAATAAGCAAAATGAC+TGG | + | chr1.4:56567831-56567850 | None:intergenic | 25.0% |
| ! | ATGGTAAACAAGGTAAAAAT+GGG | + | chr1.4:56570694-56570713 | None:intergenic | 25.0% |
| ! | ATGTGCTAATGTATTTCTTA+AGG | - | chr1.4:56569081-56569100 | MS.gene036059:intron | 25.0% |
| ! | ATGTTATAATTAGCACTGTA+TGG | + | chr1.4:56568132-56568151 | None:intergenic | 25.0% |
| ! | CAATTCATAATTACCTCTAT+TGG | + | chr1.4:56569269-56569288 | None:intergenic | 25.0% |
| ! | GGATATTATCTTAACTCTTT+AGG | - | chr1.4:56565686-56565705 | MS.gene036059:intron | 25.0% |
| ! | TGTGCTAATGTATTTCTTAA+GGG | - | chr1.4:56569082-56569101 | MS.gene036059:intron | 25.0% |
| ! | TTAAACTTGGAAGGAAAATT+GGG | - | chr1.4:56565365-56565384 | MS.gene036059:CDS | 25.0% |
| ! | TTAATTCCTTTGTCTATTGT+GGG | - | chr1.4:56566516-56566535 | MS.gene036059:intron | 25.0% |
| ! | TTAGGTTAAGCTAAACAATT+AGG | - | chr1.4:56568611-56568630 | MS.gene036059:intron | 25.0% |
| ! | TTCAGTTATTTGTGTTTGAA+AGG | - | chr1.4:56567050-56567069 | MS.gene036059:intron | 25.0% |
| ! | TTGGCGAAAGTTATTTAATA+TGG | - | chr1.4:56566295-56566314 | MS.gene036059:intron | 25.0% |
| ! | TTTAAACTTGGAAGGAAAAT+TGG | - | chr1.4:56565364-56565383 | MS.gene036059:CDS | 25.0% |
| ! | TTTAATTCCTTTGTCTATTG+TGG | - | chr1.4:56566515-56566534 | MS.gene036059:intron | 25.0% |
| !! | AAAAAACAAACAAAAGTGTG+AGG | + | chr1.4:56566353-56566372 | None:intergenic | 25.0% |
| !! | AAAGCAATTGGTTTCTTTAA+GGG | - | chr1.4:56568268-56568287 | MS.gene036059:intron | 25.0% |
| !! | AATGTTAACTTTTGGTCAAT+AGG | - | chr1.4:56565783-56565802 | MS.gene036059:intron | 25.0% |
| !! | ACAAGATTCTATCATCTTTT+CGG | + | chr1.4:56567253-56567272 | None:intergenic | 25.0% |
| !! | AGTATATTTTGCTGGAAATT+CGG | - | chr1.4:56569977-56569996 | MS.gene036059:intron | 25.0% |
| !! | ATGCATTTTCCACATTATTT+TGG | + | chr1.4:56569955-56569974 | None:intergenic | 25.0% |
| !! | CATCATATGAAGTTTTCAAA+TGG | - | chr1.4:56570591-56570610 | MS.gene036059:intron | 25.0% |
| !! | GATATTTTTCTTCTTTGCTT+AGG | - | chr1.4:56568838-56568857 | MS.gene036059:intron | 25.0% |
| !! | TATTTTCATATCACGTCTAT+TGG | - | chr1.4:56567842-56567861 | MS.gene036059:intron | 25.0% |
| !! | TCATGCTATTTATTTCAGTT+GGG | - | chr1.4:56570416-56570435 | MS.gene036059:CDS | 25.0% |
| !! | TGCATTTTCCACATTATTTT+GGG | + | chr1.4:56569954-56569973 | None:intergenic | 25.0% |
| !! | TGTCATATATTTTCTTGTGT+GGG | - | chr1.4:56566727-56566746 | MS.gene036059:intron | 25.0% |
| !! | TTCATGCTATTTATTTCAGT+TGG | - | chr1.4:56570415-56570434 | MS.gene036059:CDS | 25.0% |
| !!! | AACATCAACTTTTTTTACCA+GGG | + | chr1.4:56567302-56567321 | None:intergenic | 25.0% |
| !!! | AACTTAGGATTTTAAAGGAA+AGG | + | chr1.4:56567806-56567825 | None:intergenic | 25.0% |
| !!! | AATTTGACTATGTTTTTGAC+TGG | - | chr1.4:56570040-56570059 | MS.gene036059:intron | 25.0% |
| !!! | AGTAATATTTACTTTTTGGG+AGG | - | chr1.4:56567885-56567904 | MS.gene036059:intron | 25.0% |
| !!! | GTAATATTTACTTTTTGGGA+GGG | - | chr1.4:56567886-56567905 | MS.gene036059:intron | 25.0% |
| !!! | TAACATCAACTTTTTTTACC+AGG | + | chr1.4:56567303-56567322 | None:intergenic | 25.0% |
| !!! | TGGTTGATGTTTTTTATTCA+TGG | - | chr1.4:56565643-56565662 | MS.gene036059:intron | 25.0% |
| !!! | TTGATGTTTTTTATTCATGG+TGG | - | chr1.4:56565646-56565665 | MS.gene036059:intron | 25.0% |
| AAAAGTTTGATAGAGGAGTA+TGG | - | chr1.4:56566555-56566574 | MS.gene036059:intron | 30.0% | |
| AAGTATGATACAAACTCAGA+GGG | + | chr1.4:56569837-56569856 | None:intergenic | 30.0% | |
| ACATACCTTCTCGAATAAAA+AGG | + | chr1.4:56569929-56569948 | None:intergenic | 30.0% | |
| AGACAGACTTACTAATTGAT+CGG | + | chr1.4:56566265-56566284 | None:intergenic | 30.0% | |
| ATATTCCCCTCTTAATATTC+AGG | + | chr1.4:56566898-56566917 | None:intergenic | 30.0% | |
| ATGTATCAGTCGATTGTATT+TGG | + | chr1.4:56568461-56568480 | None:intergenic | 30.0% | |
| ATTGAATAAATCTTCCAGAC+TGG | + | chr1.4:56566199-56566218 | None:intergenic | 30.0% | |
| ATTGGTGGAAAGTTTAAACT+TGG | - | chr1.4:56565352-56565371 | MS.gene036059:CDS | 30.0% | |
| CAACTCAACATTATACTCAA+GGG | + | chr1.4:56568008-56568027 | None:intergenic | 30.0% | |
| CATAGTTGAAGAGTCTAAAT+AGG | - | chr1.4:56566759-56566778 | MS.gene036059:intron | 30.0% | |
| CTATAGACAAGTATAACACA+TGG | - | chr1.4:56566630-56566649 | MS.gene036059:CDS | 30.0% | |
| GAAAAGATATGATTGTGCAA+TGG | - | chr1.4:56567166-56567185 | MS.gene036059:intron | 30.0% | |
| GAATATTAAGAGGGGAATAT+TGG | - | chr1.4:56566898-56566917 | MS.gene036059:intron | 30.0% | |
| GGATACAAATGGTAAAGTTT+AGG | + | chr1.4:56568207-56568226 | None:intergenic | 30.0% | |
| GTATGACCTGAATATTAAGA+GGG | - | chr1.4:56566889-56566908 | MS.gene036059:intron | 30.0% | |
| GTATGTTACCCAAAATAATG+TGG | - | chr1.4:56569943-56569962 | MS.gene036059:intron | 30.0% | |
| GTGCTAATGTATTTCTTAAG+GGG | - | chr1.4:56569083-56569102 | MS.gene036059:intron | 30.0% | |
| TAATGTATTTCTTAAGGGGA+AGG | - | chr1.4:56569087-56569106 | MS.gene036059:intron | 30.0% | |
| TACCCATTATAATGAGTCTT+CGG | - | chr1.4:56567670-56567689 | MS.gene036059:CDS | 30.0% | |
| TATAATTAGCACTGTATGGT+TGG | + | chr1.4:56568128-56568147 | None:intergenic | 30.0% | |
| TATGACCTGAATATTAAGAG+GGG | - | chr1.4:56566890-56566909 | MS.gene036059:intron | 30.0% | |
| TCAGCTGTTAATATACAAAC+TGG | - | chr1.4:56565529-56565548 | MS.gene036059:CDS | 30.0% | |
| TCCAATTTCTAATTGTCTCA+CGG | - | chr1.4:56566011-56566030 | MS.gene036059:CDS | 30.0% | |
| TGGTTGAGTAACATTTGAAT+TGG | - | chr1.4:56567719-56567738 | MS.gene036059:intron | 30.0% | |
| TGTTAATATACAAACTGGAG+AGG | - | chr1.4:56565534-56565553 | MS.gene036059:CDS | 30.0% | |
| TTGAATAAATCTTCCAGACT+GGG | + | chr1.4:56566198-56566217 | None:intergenic | 30.0% | |
| TTGTGATCATAATTTCAGGA+GGG | - | chr1.4:56568581-56568600 | MS.gene036059:intron | 30.0% | |
| TTTGTGATCATAATTTCAGG+AGG | - | chr1.4:56568580-56568599 | MS.gene036059:intron | 30.0% | |
| ! | AAAGTTTGATAGAGGAGTAT+GGG | - | chr1.4:56566556-56566575 | MS.gene036059:intron | 30.0% |
| ! | AAGATTTTACATGAGACAGA+AGG | + | chr1.4:56569749-56569768 | None:intergenic | 30.0% |
| ! | AGATTTTACATGAGACAGAA+GGG | + | chr1.4:56569748-56569767 | None:intergenic | 30.0% |
| ! | ATCTTTTGTGCTTTATGTAC+AGG | + | chr1.4:56570220-56570239 | None:intergenic | 30.0% |
| ! | ATGCATTCAGTATATTTTGC+TGG | - | chr1.4:56569969-56569988 | MS.gene036059:intron | 30.0% |
| ! | ATTTCCTTCAAACTTTTGAG+AGG | + | chr1.4:56567078-56567097 | None:intergenic | 30.0% |
| ! | CAAAGCAATTGGTTTCTTTA+AGG | - | chr1.4:56568267-56568286 | MS.gene036059:intron | 30.0% |
| ! | CCTCTATCAAACTTTTCAAA+AGG | + | chr1.4:56566551-56566570 | None:intergenic | 30.0% |
| ! | CTGTCATATATTTTCTTGTG+TGG | - | chr1.4:56566726-56566745 | MS.gene036059:intron | 30.0% |
| ! | TAGTTTTTGACAGAATGCAA+CGG | - | chr1.4:56567563-56567582 | MS.gene036059:intron | 30.0% |
| ! | TGGTGAACTTAGGATTTTAA+AGG | + | chr1.4:56567811-56567830 | None:intergenic | 30.0% |
| ! | TTAGAGATGAGAATTTTGCA+GGG | - | chr1.4:56567126-56567145 | MS.gene036059:intron | 30.0% |
| ! | TTGTGTAGTTTGGATGATTT+TGG | - | chr1.4:56567612-56567631 | MS.gene036059:intron | 30.0% |
| ! | TTTAGAGATGAGAATTTTGC+AGG | - | chr1.4:56567125-56567144 | MS.gene036059:intron | 30.0% |
| !! | ATATCGAGTTGAATTGTGTT+GGG | + | chr1.4:56570975-56570994 | None:intergenic | 30.0% |
| !! | ATTTCCTAAATTTGTTGTGC+AGG | + | chr1.4:56567975-56567994 | None:intergenic | 30.0% |
| !! | CCTTTTGAAAAGTTTGATAG+AGG | - | chr1.4:56566548-56566567 | MS.gene036059:intron | 30.0% |
| !! | GGTTTTGTGATCATAATTTC+AGG | - | chr1.4:56568577-56568596 | MS.gene036059:intron | 30.0% |
| !! | TCAGTTTATTGATTTCATCC+TGG | - | chr1.4:56568098-56568117 | MS.gene036059:intron | 30.0% |
| !! | TTTCCTAAATTTGTTGTGCA+GGG | + | chr1.4:56567974-56567993 | None:intergenic | 30.0% |
| !! | TTTTTGTTATCAGTTAGTGG+TGG | - | chr1.4:56565963-56565982 | MS.gene036059:intron | 30.0% |
| !!! | ATAACATTTTAGGGTGTGTT+TGG | + | chr1.4:56569700-56569719 | None:intergenic | 30.0% |
| !!! | CATTTGATTCGTGGTTTTAA+CGG | - | chr1.4:56567589-56567608 | MS.gene036059:intron | 30.0% |
| !!! | CTGTTATGCCATTTTTTTAC+TGG | - | chr1.4:56568713-56568732 | MS.gene036059:intron | 30.0% |
| !!! | TTTTTTATTCATGGTGGTTC+TGG | - | chr1.4:56565652-56565671 | MS.gene036059:intron | 30.0% |
| AAACACTTGACTTCTCTTGT+TGG | + | chr1.4:56567107-56567126 | None:intergenic | 35.0% | |
| AAATAAGAACCTTACAGGCA+CGG | - | chr1.4:56568863-56568882 | MS.gene036059:intron | 35.0% | |
| ACCGTGAGACAATTAGAAAT+TGG | + | chr1.4:56566015-56566034 | None:intergenic | 35.0% | |
| AGAATCTTGTCTAACATGTG+AGG | - | chr1.4:56567263-56567282 | MS.gene036059:intron | 35.0% | |
| AGACAAGTATAACACATGGT+AGG | - | chr1.4:56566634-56566653 | MS.gene036059:CDS | 35.0% | |
| AGCGTAAGTCATTGAACTAA+AGG | + | chr1.4:56567921-56567940 | None:intergenic | 35.0% | |
| AGGGAAAATAAGAACCTTAC+AGG | - | chr1.4:56568858-56568877 | MS.gene036059:intron | 35.0% | |
| ATATGGAAGCAGTTCAAGAA+GGG | - | chr1.4:56570991-56571010 | MS.gene036059:CDS | 35.0% | |
| ATCATCATAAGTCCTATGTC+TGG | + | chr1.4:56570533-56570552 | None:intergenic | 35.0% | |
| ATGCAATAGTGCTCAATAAC+TGG | + | chr1.4:56569337-56569356 | None:intergenic | 35.0% | |
| ATGCCGAAGACTCATTATAA+TGG | + | chr1.4:56567676-56567695 | None:intergenic | 35.0% | |
| ATGGCATAACAGCCTATTAA+AGG | + | chr1.4:56568705-56568724 | None:intergenic | 35.0% | |
| ATGTTCTTACTAGCATATCC+AGG | - | chr1.4:56566695-56566714 | MS.gene036059:CDS | 35.0% | |
| ATTGAACCCACAATAGACAA+AGG | + | chr1.4:56566525-56566544 | None:intergenic | 35.0% | |
| CAACACAATTCAACTCGATA+TGG | - | chr1.4:56570974-56570993 | MS.gene036059:intron | 35.0% | |
| CAGTTGAATGCAGGAAATAT+AGG | + | chr1.4:56569430-56569449 | None:intergenic | 35.0% | |
| CATAAAGCACAAAAGATTCC+AGG | - | chr1.4:56570223-56570242 | MS.gene036059:intron | 35.0% | |
| CATATTAATGCCACAACACA+AGG | - | chr1.4:56566925-56566944 | MS.gene036059:intron | 35.0% | |
| CATGCGATATCATTTATCGA+AGG | - | chr1.4:56565738-56565757 | MS.gene036059:intron | 35.0% | |
| CATTCAACTGTTAGCACTTA+GGG | - | chr1.4:56569440-56569459 | MS.gene036059:intron | 35.0% | |
| CCAACTCAACATTATACTCA+AGG | + | chr1.4:56568009-56568028 | None:intergenic | 35.0% | |
| CCTTGAGTATAATGTTGAGT+TGG | - | chr1.4:56568006-56568025 | MS.gene036059:CDS | 35.0% | |
| CTGTATATGATTCTTCAAGG+AGG | - | chr1.4:56566099-56566118 | MS.gene036059:intron | 35.0% | |
| CTTCTCGAATAAAAAGGTCT+CGG | + | chr1.4:56569923-56569942 | None:intergenic | 35.0% | |
| CTTGGTATGATAGATTCAAG+GGG | + | chr1.4:56566964-56566983 | None:intergenic | 35.0% | |
| GAAAAACTCAAGGACAAACA+TGG | + | chr1.4:56567758-56567777 | None:intergenic | 35.0% | |
| GAAGTATGATACAAACTCAG+AGG | + | chr1.4:56569838-56569857 | None:intergenic | 35.0% | |
| GACAAGTATAACACATGGTA+GGG | - | chr1.4:56566635-56566654 | MS.gene036059:CDS | 35.0% | |
| GAGTACTCTTGAAAAACTCA+AGG | + | chr1.4:56567768-56567787 | None:intergenic | 35.0% | |
| GCTTGGTATGATAGATTCAA+GGG | + | chr1.4:56566965-56566984 | None:intergenic | 35.0% | |
| GGTATGACCTGAATATTAAG+AGG | - | chr1.4:56566888-56566907 | MS.gene036059:intron | 35.0% | |
| GGTTCTGTCAAAAATATTCC+AGG | - | chr1.4:56566032-56566051 | MS.gene036059:CDS | 35.0% | |
| GTGGAAAGTTTAAACTTGGA+AGG | - | chr1.4:56565356-56565375 | MS.gene036059:CDS | 35.0% | |
| GTTGAATACATGCATTCAAG+AGG | - | chr1.4:56566385-56566404 | MS.gene036059:intron | 35.0% | |
| TAATATACAAACTGGAGAGG+AGG | - | chr1.4:56565537-56565556 | MS.gene036059:CDS | 35.0% | |
| TACTAATTGTGTGATTGTGG+TGG | - | chr1.4:56569019-56569038 | MS.gene036059:intron | 35.0% | |
| TATTAAGAGGGGAATATTGG+AGG | - | chr1.4:56566901-56566920 | MS.gene036059:intron | 35.0% | |
| TGAGATCAATGGGAATTTGT+GGG | + | chr1.4:56568803-56568822 | None:intergenic | 35.0% | |
| TGCCGAAGACTCATTATAAT+GGG | + | chr1.4:56567675-56567694 | None:intergenic | 35.0% | |
| TGCTTGATTGCACTATGTAA+CGG | + | chr1.4:56567484-56567503 | None:intergenic | 35.0% | |
| TGGCATAACAGCCTATTAAA+GGG | + | chr1.4:56568704-56568723 | None:intergenic | 35.0% | |
| TGGGGAAAGATATAAATCGT+AGG | - | chr1.4:56566995-56567014 | MS.gene036059:intron | 35.0% | |
| TTGAGATCAATGGGAATTTG+TGG | + | chr1.4:56568804-56568823 | None:intergenic | 35.0% | |
| ! | AAAGCCAGACAATTTTCTGA+TGG | - | chr1.4:56566426-56566445 | MS.gene036059:intron | 35.0% |
| ! | AAGCCAGACAATTTTCTGAT+GGG | - | chr1.4:56566427-56566446 | MS.gene036059:intron | 35.0% |
| ! | ACATAGGACTTATGATGATG+TGG | - | chr1.4:56570534-56570553 | MS.gene036059:intron | 35.0% |
| ! | ATATTTTGCTGGAAATTCGG+TGG | - | chr1.4:56569980-56569999 | MS.gene036059:intron | 35.0% |
| ! | CAATTGGTTTCTTTAAGGGT+GGG | - | chr1.4:56568272-56568291 | MS.gene036059:intron | 35.0% |
| ! | CATTTTATCGTGTTAACGCT+AGG | + | chr1.4:56568181-56568200 | None:intergenic | 35.0% |
| ! | CGGTAAGTGATATTTTATGC+TGG | - | chr1.4:56568920-56568939 | MS.gene036059:intron | 35.0% |
| ! | GTTAACTTTTGGTCAATAGG+TGG | - | chr1.4:56565786-56565805 | MS.gene036059:intron | 35.0% |
| ! | TAGAGATGAGAATTTTGCAG+GGG | - | chr1.4:56567127-56567146 | MS.gene036059:intron | 35.0% |
| ! | TGTTTTTCCTACTCTCTCTT+GGG | + | chr1.4:56567223-56567242 | None:intergenic | 35.0% |
| ! | TTCAAGTGAGTTGGATGAAA+TGG | - | chr1.4:56567019-56567038 | MS.gene036059:intron | 35.0% |
| !! | AATTGTCTGGCTTTATGTCT+CGG | + | chr1.4:56566420-56566439 | None:intergenic | 35.0% |
| !! | ATGCTGGTTTGTTACTTTCT+CGG | - | chr1.4:56568936-56568955 | MS.gene036059:intron | 35.0% |
| !! | ATTTGGCTTTGATGATACCA+TGG | + | chr1.4:56571017-56571036 | None:intergenic | 35.0% |
| !! | ATTTTCTTGTGTGGGTTGTA+TGG | - | chr1.4:56566735-56566754 | MS.gene036059:intron | 35.0% |
| !! | CAGTCGATTGTATTTGGTTT+TGG | + | chr1.4:56568455-56568474 | None:intergenic | 35.0% |
| !! | CATATCGAGTTGAATTGTGT+TGG | + | chr1.4:56570976-56570995 | None:intergenic | 35.0% |
| !! | GTTTTAACGGTTGTGTAGTT+TGG | - | chr1.4:56567602-56567621 | MS.gene036059:intron | 35.0% |
| !! | TCTTTTGGAGAGCTTTACTT+AGG | - | chr1.4:56565394-56565413 | MS.gene036059:CDS | 35.0% |
| !!! | GATCCCTATATTTTTTCGCA+AGG | + | chr1.4:56568526-56568545 | None:intergenic | 35.0% |
| !!! | GTGGTTCTGGATGTATTTTT+AGG | - | chr1.4:56565665-56565684 | MS.gene036059:intron | 35.0% |
| AACGTCTTGTCAAACCAAAC+AGG | + | chr1.4:56570628-56570647 | None:intergenic | 40.0% | |
| AAGTGCTAACAGTTGAATGC+AGG | + | chr1.4:56569439-56569458 | None:intergenic | 40.0% | |
| ACCAATTGCTTTGACCAACA+AGG | + | chr1.4:56568260-56568279 | None:intergenic | 40.0% | |
| AGCTGCAAAACAGAATTGTG+AGG | + | chr1.4:56565858-56565877 | None:intergenic | 40.0% | |
| AGGTCATACCATATCCAATG+TGG | + | chr1.4:56566878-56566897 | None:intergenic | 40.0% | |
| ATACCAAGCGACGAAGAAAT+GGG | - | chr1.4:56566976-56566995 | MS.gene036059:intron | 40.0% | |
| ATAGGGATCTTCAGACTCAT+AGG | - | chr1.4:56568537-56568556 | MS.gene036059:intron | 40.0% | |
| ATCGTAGGATTCAAGTGAGT+TGG | - | chr1.4:56567010-56567029 | MS.gene036059:intron | 40.0% | |
| ATGATTCTTCAAGGAGGAAC+TGG | - | chr1.4:56566105-56566124 | MS.gene036059:intron | 40.0% | |
| CACACTCTGTATCTCATTTC+AGG | - | chr1.4:56568481-56568500 | MS.gene036059:intron | 40.0% | |
| CCGACTTCAAAGTGAATTTC+CGG | + | chr1.4:56566230-56566249 | None:intergenic | 40.0% | |
| CGATAAAATCAGTGAGACGA+AGG | - | chr1.4:56569235-56569254 | MS.gene036059:intron | 40.0% | |
| CGCATTTGCATCCCTTTAAT+AGG | - | chr1.4:56568690-56568709 | MS.gene036059:intron | 40.0% | |
| CGCTTGGTATGATAGATTCA+AGG | + | chr1.4:56566966-56566985 | None:intergenic | 40.0% | |
| CGGCCTTGCGAAAAAATATA+GGG | - | chr1.4:56568520-56568539 | MS.gene036059:intron | 40.0% | |
| GAGATTCGGGAGAAATTATC+TGG | - | chr1.4:56570442-56570461 | MS.gene036059:CDS | 40.0% | |
| GATATGGAAGCAGTTCAAGA+AGG | - | chr1.4:56570990-56571009 | MS.gene036059:CDS | 40.0% | |
| GATCACAAAACCAACCTGTA+CGG | + | chr1.4:56568569-56568588 | None:intergenic | 40.0% | |
| GATCCCTGCACAACAAATTT+AGG | - | chr1.4:56567968-56567987 | MS.gene036059:intron | 40.0% | |
| GCAAAATGACTGGTGAACTT+AGG | + | chr1.4:56567821-56567840 | None:intergenic | 40.0% | |
| GCATTCAACTGTTAGCACTT+AGG | - | chr1.4:56569439-56569458 | MS.gene036059:intron | 40.0% | |
| GCTTGTTTCGTATCATACAC+AGG | + | chr1.4:56571109-56571128 | None:intergenic | 40.0% | |
| GGTACCTCTCAAAAGTTTGA+AGG | - | chr1.4:56567071-56567090 | MS.gene036059:intron | 40.0% | |
| GGTCATACCATATCCAATGT+GGG | + | chr1.4:56566877-56566896 | None:intergenic | 40.0% | |
| GGTGGGAATTTCTTAATCGT+TGG | - | chr1.4:56568289-56568308 | MS.gene036059:intron | 40.0% | |
| GTCAACACTCATCTTGGAAT+CGG | - | chr1.4:56568900-56568919 | MS.gene036059:intron | 40.0% | |
| TCAAGGACAAACATGGAAAC+AGG | + | chr1.4:56567751-56567770 | None:intergenic | 40.0% | |
| TCATCAAAGCCAAATTCCTC+AGG | - | chr1.4:56571022-56571041 | MS.gene036059:intron | 40.0% | |
| TCCTTGTTGGTCAAAGCAAT+TGG | - | chr1.4:56568256-56568275 | MS.gene036059:intron | 40.0% | |
| TCGGCCTTGCGAAAAAATAT+AGG | - | chr1.4:56568519-56568538 | MS.gene036059:intron | 40.0% | |
| TCTCGAAATGAGACGTGAAA+TGG | - | chr1.4:56565818-56565837 | MS.gene036059:intron | 40.0% | |
| TGAAAATTCGTAGTCCTGAC+AGG | + | chr1.4:56567199-56567218 | None:intergenic | 40.0% | |
| TGTGTTTGGATTGAGGGTTT+AGG | + | chr1.4:56569686-56569705 | None:intergenic | 40.0% | |
| TTAGGGTGTGTTTGGATTGA+GGG | + | chr1.4:56569692-56569711 | None:intergenic | 40.0% | |
| TTCTTACTAGCATATCCAGG+AGG | - | chr1.4:56566698-56566717 | MS.gene036059:CDS | 40.0% | |
| TTGGTCAATAGGTGGATGAT+TGG | - | chr1.4:56565794-56565813 | MS.gene036059:intron | 40.0% | |
| TTTCAGGAGGGAGCAATATT+AGG | - | chr1.4:56568593-56568612 | MS.gene036059:intron | 40.0% | |
| TTTCAGTTGGGAGAGAGATT+CGG | - | chr1.4:56570428-56570447 | MS.gene036059:CDS | 40.0% | |
| TTTGACTCATAGTGAAGCTG+TGG | + | chr1.4:56566078-56566097 | None:intergenic | 40.0% | |
| TTTGGATTGAGGGTTTAGGA+GGG | + | chr1.4:56569682-56569701 | None:intergenic | 40.0% | |
| ! | AAAATTGGGAGTGGCTCTTT+TGG | - | chr1.4:56565379-56565398 | MS.gene036059:CDS | 40.0% |
| ! | AACTCCAAACCATTTGAGGT+GGG | + | chr1.4:56566136-56566155 | None:intergenic | 40.0% |
| ! | ACATTTGTTGAGTCCCACAT+TGG | - | chr1.4:56566861-56566880 | MS.gene036059:intron | 40.0% |
| ! | CGAGACCTTTTTATTCGAGA+AGG | - | chr1.4:56569921-56569940 | MS.gene036059:intron | 40.0% |
| ! | CTCAAATGGTTTGGAGTTGA+GGG | - | chr1.4:56566138-56566157 | MS.gene036059:intron | 40.0% |
| ! | CTGTTGCTCAGTTCTTTTCA+AGG | + | chr1.4:56567330-56567349 | None:intergenic | 40.0% |
| ! | GCAATTGGTTTCTTTAAGGG+TGG | - | chr1.4:56568271-56568290 | MS.gene036059:intron | 40.0% |
| ! | GTGTTTTTCCTACTCTCTCT+TGG | + | chr1.4:56567224-56567243 | None:intergenic | 40.0% |
| ! | TGTGTTTGGATGGAGTGTTT+AGG | - | chr1.4:56569463-56569482 | MS.gene036059:intron | 40.0% |
| ! | TTGAAGTATCCACAGAGTAG+TGG | - | chr1.4:56570069-56570088 | MS.gene036059:intron | 40.0% |
| ! | TTTAGGGTGTGTTTGGATTG+AGG | + | chr1.4:56569693-56569712 | None:intergenic | 40.0% |
| ! | TTTGACATGCGCACACATTT+TGG | - | chr1.4:56568051-56568070 | MS.gene036059:intron | 40.0% |
| ! | TTTGGATGGAGTGTTTAGGA+GGG | - | chr1.4:56569467-56569486 | MS.gene036059:intron | 40.0% |
| ! | TTTTCAACCCAAGAGAGAGT+AGG | - | chr1.4:56567213-56567232 | MS.gene036059:intron | 40.0% |
| ! | TTTTTGTTGGTCGCTTACTG+TGG | - | chr1.4:56570143-56570162 | MS.gene036059:CDS | 40.0% |
| !! | CCGGAAATTCACTTTGAAGT+CGG | - | chr1.4:56566227-56566246 | MS.gene036059:intron | 40.0% |
| !! | GAAGGTATCAACTCCAATAG+AGG | - | chr1.4:56569253-56569272 | MS.gene036059:intron | 40.0% |
| !! | GGATTTTAAAGGAAAGGTCC+AGG | + | chr1.4:56567800-56567819 | None:intergenic | 40.0% |
| !! | GGTTTGTTACTTTCTCGGTT+AGG | - | chr1.4:56568941-56568960 | MS.gene036059:intron | 40.0% |
| !! | TGGGAATGTTGTTTCCTGTT+TGG | - | chr1.4:56570611-56570630 | MS.gene036059:intron | 40.0% |
| !! | TTGTAGACTAGTCTCCTTGT+TGG | - | chr1.4:56568243-56568262 | MS.gene036059:intron | 40.0% |
| !!! | TTTCCTTTTTCAGTCTTCCC+TGG | - | chr1.4:56569177-56569196 | MS.gene036059:intron | 40.0% |
| AAACTGTGCACCTTGTGTTG+TGG | + | chr1.4:56566938-56566957 | None:intergenic | 45.0% | |
| AATTCCTCAGGTGACCATTC+TGG | - | chr1.4:56571034-56571053 | MS.gene036059:intron | 45.0% | |
| ACAAAGTCGAAGGGATGATC+TGG | - | chr1.4:56569046-56569065 | MS.gene036059:intron | 45.0% | |
| AGGCCCATCAGAAAATTGTC+TGG | + | chr1.4:56566433-56566452 | None:intergenic | 45.0% | |
| AGTCTGTCTGTCTGTCAAGT+TGG | - | chr1.4:56566276-56566295 | MS.gene036059:intron | 45.0% | |
| ATGGTGAACACACCAGACAT+AGG | - | chr1.4:56570518-56570537 | MS.gene036059:intron | 45.0% | |
| CAACACAAGGTGCACAGTTT+CGG | - | chr1.4:56566938-56566957 | MS.gene036059:intron | 45.0% | |
| CAACTCCAAACCATTTGAGG+TGG | + | chr1.4:56566137-56566156 | None:intergenic | 45.0% | |
| CATACCAAGCGACGAAGAAA+TGG | - | chr1.4:56566975-56566994 | MS.gene036059:intron | 45.0% | |
| CCTCAACTCCAAACCATTTG+AGG | + | chr1.4:56566140-56566159 | None:intergenic | 45.0% | |
| CGCATGCATGCTCAATATCA+TGG | + | chr1.4:56565724-56565743 | None:intergenic | 45.0% | |
| CTGTCACAGCACATATTAGC+AGG | + | chr1.4:56570288-56570307 | None:intergenic | 45.0% | |
| CTTGGAAGGAAAATTGGGAG+TGG | - | chr1.4:56565370-56565389 | MS.gene036059:CDS | 45.0% | |
| GAATGGTCACCTGAGGAATT+TGG | + | chr1.4:56571034-56571053 | None:intergenic | 45.0% | |
| GAGACAGAAGGGAAATGAAG+AGG | + | chr1.4:56569737-56569756 | None:intergenic | 45.0% | |
| GAGGAGTCTAATAGAAACCC+TGG | - | chr1.4:56567282-56567301 | MS.gene036059:CDS | 45.0% | |
| GCAAATTCTAGCCCTCATCA+TGG | - | chr1.4:56570499-56570518 | MS.gene036059:intron | 45.0% | |
| GCAAGTGTCAACACTCATCT+TGG | - | chr1.4:56568894-56568913 | MS.gene036059:intron | 45.0% | |
| GCAATGGAATAACACCTGTC+AGG | - | chr1.4:56567182-56567201 | MS.gene036059:intron | 45.0% | |
| GCAGGGATCTATGCTATGAA+CGG | + | chr1.4:56567957-56567976 | None:intergenic | 45.0% | |
| GTTAGCACTTAGGGTGTGTT+TGG | - | chr1.4:56569449-56569468 | MS.gene036059:intron | 45.0% | |
| GTTGAGTCCCACATTGGATA+TGG | - | chr1.4:56566867-56566886 | MS.gene036059:intron | 45.0% | |
| GTTTGGATTGAGGGTTTAGG+AGG | + | chr1.4:56569683-56569702 | None:intergenic | 45.0% | |
| TACCAAGCGACGAAGAAATG+GGG | - | chr1.4:56566977-56566996 | MS.gene036059:intron | 45.0% | |
| TATACAAACTGGAGAGGAGG+TGG | - | chr1.4:56565540-56565559 | MS.gene036059:CDS | 45.0% | |
| TATATGACAGCGTTACCTCC+TGG | + | chr1.4:56566716-56566735 | None:intergenic | 45.0% | |
| TGAACTCTATGTGCACCAGA+TGG | + | chr1.4:56571085-56571104 | None:intergenic | 45.0% | |
| TGGTGTGTTCACCATGATGA+GGG | + | chr1.4:56570513-56570532 | None:intergenic | 45.0% | |
| TGGTTGTTGTAACGACAGCA+TGG | - | chr1.4:56570163-56570182 | MS.gene036059:intron | 45.0% | |
| TGTCCTCAAACCTCAACGAA+CGG | + | chr1.4:56569869-56569888 | None:intergenic | 45.0% | |
| TTCAGTTGGGAGAGAGATTC+GGG | - | chr1.4:56570429-56570448 | MS.gene036059:CDS | 45.0% | |
| TTGCCAGGGAAGACTGAAAA+AGG | + | chr1.4:56569183-56569202 | None:intergenic | 45.0% | |
| TTGGATTGAGGGTTTAGGAG+GGG | + | chr1.4:56569681-56569700 | None:intergenic | 45.0% | |
| ! | AAGCAACTTTTGCTCGCAGT+GGG | - | chr1.4:56571125-56571144 | MS.gene036059:intron | 45.0% |
| ! | ACTCCAAACCATTTGAGGTG+GGG | + | chr1.4:56566135-56566154 | None:intergenic | 45.0% |
| ! | AGAATTTTGCAGGGGATGAG+TGG | - | chr1.4:56567135-56567154 | MS.gene036059:intron | 45.0% |
| ! | AGGGATGATCTGGAATCTCT+TGG | - | chr1.4:56569056-56569075 | MS.gene036059:intron | 45.0% |
| ! | CCTCAAATGGTTTGGAGTTG+AGG | - | chr1.4:56566137-56566156 | MS.gene036059:intron | 45.0% |
| ! | GTTTGGATGGAGTGTTTAGG+AGG | - | chr1.4:56569466-56569485 | MS.gene036059:intron | 45.0% |
| ! | TGAGGGAGAGTACAATGTGA+TGG | - | chr1.4:56566155-56566174 | MS.gene036059:intron | 45.0% |
| ! | TTGGATGGAGTGTTTAGGAG+GGG | - | chr1.4:56569468-56569487 | MS.gene036059:intron | 45.0% |
| ! | TTGTTGAAGCATTCACCCAG+AGG | - | chr1.4:56570470-56570489 | MS.gene036059:CDS | 45.0% |
| !! | CAGGTGTATGCCATTGACTT+CGG | - | chr1.4:56568500-56568519 | MS.gene036059:intron | 45.0% |
| !! | CTTGATTTGCTTTACGTCCG+AGG | + | chr1.4:56566453-56566472 | None:intergenic | 45.0% |
| !! | GACAATTTTCTGATGGGCCT+CGG | - | chr1.4:56566433-56566452 | MS.gene036059:intron | 45.0% |
| !! | TTTTTCAGTCTTCCCTGGCA+AGG | - | chr1.4:56569182-56569201 | MS.gene036059:intron | 45.0% |
| !! | TCATAAAATAAAATAAAAAA+TGG | + | chr1.4:56568355-56568374 | None:intergenic | 5.0% |
| AAGCAGTTCAAGAAGGGCCA+TGG | - | chr1.4:56570997-56571016 | MS.gene036059:CDS | 50.0% | |
| ACCTCAACGAACGGCAATAG+TGG | + | chr1.4:56569860-56569879 | None:intergenic | 50.0% | |
| AGAATTTGCGCGGTTCCTCT+GGG | + | chr1.4:56570488-56570507 | None:intergenic | 50.0% | |
| AGCTCCTCAGAGGATCATCA+CGG | + | chr1.4:56571165-56571184 | None:intergenic | 50.0% | |
| ATAGTGAAGCTGTGGATGCC+TGG | + | chr1.4:56566070-56566089 | None:intergenic | 50.0% | |
| ATCCCCCACCTCAAATGGTT+TGG | - | chr1.4:56566129-56566148 | MS.gene036059:intron | 50.0% | |
| CAAGCAACTGCAAGCTAGTC+AGG | - | chr1.4:56567498-56567517 | MS.gene036059:intron | 50.0% | |
| CAGCTGAAAGACAACAGACC+TGG | + | chr1.4:56570244-56570263 | None:intergenic | 50.0% | |
| CGGTGGTTGTGAATTGACGT+GGG | - | chr1.4:56569997-56570016 | MS.gene036059:intron | 50.0% | |
| CTCATAGGCACATACCGTAC+AGG | - | chr1.4:56568552-56568571 | MS.gene036059:intron | 50.0% | |
| CTCTATGTGCACCAGATGGA+CGG | + | chr1.4:56571081-56571100 | None:intergenic | 50.0% | |
| CTGGTGTGTTCACCATGATG+AGG | + | chr1.4:56570514-56570533 | None:intergenic | 50.0% | |
| GATGAGGGCTAGAATTTGCG+CGG | + | chr1.4:56570498-56570517 | None:intergenic | 50.0% | |
| GCACTTAGGGTGTGTTTGGA+TGG | - | chr1.4:56569453-56569472 | MS.gene036059:intron | 50.0% | |
| GGTGGCAGAACAAAGTCGAA+GGG | - | chr1.4:56569037-56569056 | MS.gene036059:intron | 50.0% | |
| GTGATGGTCATCGACCTTCT+TGG | - | chr1.4:56566171-56566190 | MS.gene036059:intron | 50.0% | |
| TAGAATTTGCGCGGTTCCTC+TGG | + | chr1.4:56570489-56570508 | None:intergenic | 50.0% | |
| TAGGCACATACCGTACAGGT+TGG | - | chr1.4:56568556-56568575 | MS.gene036059:intron | 50.0% | |
| TCCACTATTGCCGTTCGTTG+AGG | - | chr1.4:56569856-56569875 | MS.gene036059:intron | 50.0% | |
| TCCAGGAATCTGTGAAGACC+AGG | - | chr1.4:56566049-56566068 | MS.gene036059:CDS | 50.0% | |
| TCGGTGGTTGTGAATTGACG+TGG | - | chr1.4:56569996-56570015 | MS.gene036059:intron | 50.0% | |
| TGGTGGCAGAACAAAGTCGA+AGG | - | chr1.4:56569036-56569055 | MS.gene036059:intron | 50.0% | |
| TTCCCCATTTCTTCGTCGCT+TGG | + | chr1.4:56566982-56567001 | None:intergenic | 50.0% | |
| TTGCCGTTCGTTGAGGTTTG+AGG | - | chr1.4:56569863-56569882 | MS.gene036059:intron | 50.0% | |
| TTGTAACGACAGCATGGCAC+TGG | - | chr1.4:56570169-56570188 | MS.gene036059:intron | 50.0% | |
| TTTCGCAAGGCCGAAGTCAA+TGG | + | chr1.4:56568513-56568532 | None:intergenic | 50.0% | |
| ! | AGAGTACTCTCACTTCGTCC+TGG | - | chr1.4:56567779-56567798 | MS.gene036059:intron | 50.0% |
| ! | ATGGAGTGTTTAGGAGGGGA+GGG | - | chr1.4:56569472-56569491 | MS.gene036059:intron | 50.0% |
| ! | CAACGGCGTCATTTGATTCG+TGG | - | chr1.4:56567580-56567599 | MS.gene036059:intron | 50.0% |
| ! | CAAGCAACTTTTGCTCGCAG+TGG | - | chr1.4:56571124-56571143 | MS.gene036059:intron | 50.0% |
| ! | CACTGTATGGTTGGTATGCC+AGG | + | chr1.4:56568119-56568138 | None:intergenic | 50.0% |
| ! | CTCCAAACCATTTGAGGTGG+GGG | + | chr1.4:56566134-56566153 | None:intergenic | 50.0% |
| ! | GCTTTGAGCTCCTCACTATC+AGG | - | chr1.4:56571182-56571201 | MS.gene036059:CDS | 50.0% |
| AGAGGAGGTGGCTGTTAAGC+TGG | - | chr1.4:56565552-56565571 | MS.gene036059:CDS | 55.0% | |
| AGGAGCTCAAAGCTCCTCAG+AGG | + | chr1.4:56571175-56571194 | None:intergenic | 55.0% | |
| AGGTGACCATTCTGGCAGGA+TGG | - | chr1.4:56571042-56571061 | MS.gene036059:intron | 55.0% | |
| CTAGAGCTGCCACTACTCTG+TGG | + | chr1.4:56570081-56570100 | None:intergenic | 55.0% | |
| CTGGAATCCCCCACCTCAAA+TGG | - | chr1.4:56566124-56566143 | MS.gene036059:intron | 55.0% | |
| CTTCCAGACTGGGTCCAAGA+AGG | + | chr1.4:56566188-56566207 | None:intergenic | 55.0% | |
| TCCTCAGAGGATCATCACGG+TGG | + | chr1.4:56571162-56571181 | None:intergenic | 55.0% | |
| TCTTCCCTGGCAAGGACTGA+GGG | - | chr1.4:56569190-56569209 | MS.gene036059:intron | 55.0% | |
| TGTTTAGGAGGGGAGGGGAA+GGG | - | chr1.4:56569478-56569497 | MS.gene036059:intron | 55.0% | |
| TTGTGGCCATCCTGCCAGAA+TGG | + | chr1.4:56571051-56571070 | None:intergenic | 55.0% | |
| ! | CAGAGTAGTGGCAGCTCTAG+AGG | - | chr1.4:56570081-56570100 | MS.gene036059:CDS | 55.0% |
| ! | GATGGAGTGTTTAGGAGGGG+AGG | - | chr1.4:56569471-56569490 | MS.gene036059:intron | 55.0% |
| ! | GCCTGGTCTTCACAGATTCC+TGG | + | chr1.4:56566053-56566072 | None:intergenic | 55.0% |
| ! | TGGAGTGTTTAGGAGGGGAG+GGG | - | chr1.4:56569473-56569492 | MS.gene036059:intron | 55.0% |
| !! | GACGTGGGCATTGATCATGC+AGG | - | chr1.4:56570012-56570031 | MS.gene036059:intron | 55.0% |
| !! | GTAGTGGCAGCTCTAGAGGA+CGG | - | chr1.4:56570085-56570104 | MS.gene036059:CDS | 55.0% |
| !! | TAGTGGCAGCTCTAGAGGAC+GGG | - | chr1.4:56570086-56570105 | MS.gene036059:CDS | 55.0% |
| AGGGTTTAGGAGGGGAAGCG+AGG | + | chr1.4:56569673-56569692 | None:intergenic | 60.0% | |
| CATAGCGTGCCGTGCCTGTA+AGG | + | chr1.4:56568875-56568894 | None:intergenic | 60.0% | |
| CCTCAGGTGACCATTCTGGC+AGG | - | chr1.4:56571038-56571057 | MS.gene036059:intron | 60.0% | |
| CCTGCCAGAATGGTCACCTG+AGG | + | chr1.4:56571041-56571060 | None:intergenic | 60.0% | |
| CGACCTTCTTGGACCCAGTC+TGG | - | chr1.4:56566182-56566201 | MS.gene036059:intron | 60.0% | |
| CTGGCAGGATGGCCACAAGT+GGG | - | chr1.4:56571053-56571072 | MS.gene036059:intron | 60.0% | |
| GCCACCGTGATGATCCTCTG+AGG | - | chr1.4:56571158-56571177 | MS.gene036059:CDS | 60.0% | |
| GCTCGCAGTGGGTCTATGAG+AGG | - | chr1.4:56571136-56571155 | MS.gene036059:CDS | 60.0% | |
| GGGTTTAGGAGGGGAAGCGA+GGG | + | chr1.4:56569672-56569691 | None:intergenic | 60.0% | |
| GTCTTCCCTGGCAAGGACTG+AGG | - | chr1.4:56569189-56569208 | MS.gene036059:intron | 60.0% | |
| GTGTTTAGGAGGGGAGGGGA+AGG | - | chr1.4:56569477-56569496 | MS.gene036059:intron | 60.0% | |
| TAGGAGGGGAAGCGAGGGAA+GGG | + | chr1.4:56569667-56569686 | None:intergenic | 60.0% | |
| TCTGGCAGGATGGCCACAAG+TGG | - | chr1.4:56571052-56571071 | MS.gene036059:intron | 60.0% | |
| TGGCAGGATGGCCACAAGTG+GGG | - | chr1.4:56571054-56571073 | MS.gene036059:intron | 60.0% | |
| TTAGGAGGGGAAGCGAGGGA+AGG | + | chr1.4:56569668-56569687 | None:intergenic | 60.0% | |
| !! | ACGACAGCATGGCACTGGCA+AGG | - | chr1.4:56570174-56570193 | MS.gene036059:intron | 60.0% |
| ACAAGTGGGGGCCGTCCATC+TGG | - | chr1.4:56571067-56571086 | MS.gene036059:intron | 65.0% | |
| AGATGGACGGCCCCCACTTG+TGG | + | chr1.4:56571068-56571087 | None:intergenic | 65.0% | |
| CCAGCCCTCAGTCCTTGCCA+GGG | + | chr1.4:56569197-56569216 | None:intergenic | 65.0% | |
| GGCAGGATGGCCACAAGTGG+GGG | - | chr1.4:56571055-56571074 | MS.gene036059:intron | 65.0% | |
| TAGGAGGGGAGGGGAAGGGA+GGG | - | chr1.4:56569482-56569501 | MS.gene036059:intron | 65.0% | |
| TCCAGCCCTCAGTCCTTGCC+AGG | + | chr1.4:56569198-56569217 | None:intergenic | 65.0% | |
| TTAGGAGGGGAGGGGAAGGG+AGG | - | chr1.4:56569481-56569500 | MS.gene036059:intron | 65.0% | |
| AGGAGGGGAGGGGAAGGGAG+GGG | - | chr1.4:56569483-56569502 | MS.gene036059:intron | 70.0% | |
| CCCTGGCAAGGACTGAGGGC+TGG | - | chr1.4:56569194-56569213 | MS.gene036059:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 56565340 | 56571210 | 56565340 | ID=MS.gene036059 |
| chr1.4 | mRNA | 56565340 | 56571210 | 56565340 | ID=MS.gene036059.t1;Parent=MS.gene036059 |
| chr1.4 | exon | 56571135 | 56571210 | 56571135 | ID=MS.gene036059.t1.exon1;Parent=MS.gene036059.t1 |
| chr1.4 | CDS | 56571135 | 56571210 | 56571135 | ID=cds.MS.gene036059.t1;Parent=MS.gene036059.t1 |
| chr1.4 | exon | 56570977 | 56571017 | 56570977 | ID=MS.gene036059.t1.exon2;Parent=MS.gene036059.t1 |
| chr1.4 | CDS | 56570977 | 56571017 | 56570977 | ID=cds.MS.gene036059.t1;Parent=MS.gene036059.t1 |
| chr1.4 | exon | 56570278 | 56570496 | 56570278 | ID=MS.gene036059.t1.exon3;Parent=MS.gene036059.t1 |
| chr1.4 | CDS | 56570278 | 56570496 | 56570278 | ID=cds.MS.gene036059.t1;Parent=MS.gene036059.t1 |
| chr1.4 | exon | 56570079 | 56570174 | 56570079 | ID=MS.gene036059.t1.exon4;Parent=MS.gene036059.t1 |
| chr1.4 | CDS | 56570079 | 56570174 | 56570079 | ID=cds.MS.gene036059.t1;Parent=MS.gene036059.t1 |
| chr1.4 | exon | 56567977 | 56568047 | 56567977 | ID=MS.gene036059.t1.exon5;Parent=MS.gene036059.t1 |
| chr1.4 | CDS | 56567977 | 56568047 | 56567977 | ID=cds.MS.gene036059.t1;Parent=MS.gene036059.t1 |
| chr1.4 | exon | 56567629 | 56567690 | 56567629 | ID=MS.gene036059.t1.exon6;Parent=MS.gene036059.t1 |
| chr1.4 | CDS | 56567629 | 56567690 | 56567629 | ID=cds.MS.gene036059.t1;Parent=MS.gene036059.t1 |
| chr1.4 | exon | 56567442 | 56567505 | 56567442 | ID=MS.gene036059.t1.exon7;Parent=MS.gene036059.t1 |
| chr1.4 | CDS | 56567442 | 56567505 | 56567442 | ID=cds.MS.gene036059.t1;Parent=MS.gene036059.t1 |
| chr1.4 | exon | 56567276 | 56567360 | 56567276 | ID=MS.gene036059.t1.exon8;Parent=MS.gene036059.t1 |
| chr1.4 | CDS | 56567276 | 56567360 | 56567276 | ID=cds.MS.gene036059.t1;Parent=MS.gene036059.t1 |
| chr1.4 | exon | 56566608 | 56566734 | 56566608 | ID=MS.gene036059.t1.exon9;Parent=MS.gene036059.t1 |
| chr1.4 | CDS | 56566608 | 56566734 | 56566608 | ID=cds.MS.gene036059.t1;Parent=MS.gene036059.t1 |
| chr1.4 | exon | 56566443 | 56566516 | 56566443 | ID=MS.gene036059.t1.exon10;Parent=MS.gene036059.t1 |
| chr1.4 | CDS | 56566443 | 56566516 | 56566443 | ID=cds.MS.gene036059.t1;Parent=MS.gene036059.t1 |
| chr1.4 | exon | 56566306 | 56566369 | 56566306 | ID=MS.gene036059.t1.exon11;Parent=MS.gene036059.t1 |
| chr1.4 | CDS | 56566306 | 56566369 | 56566306 | ID=cds.MS.gene036059.t1;Parent=MS.gene036059.t1 |
| chr1.4 | exon | 56565995 | 56566116 | 56565995 | ID=MS.gene036059.t1.exon12;Parent=MS.gene036059.t1 |
| chr1.4 | CDS | 56565995 | 56566116 | 56565995 | ID=cds.MS.gene036059.t1;Parent=MS.gene036059.t1 |
| chr1.4 | exon | 56565340 | 56565585 | 56565340 | ID=MS.gene036059.t1.exon13;Parent=MS.gene036059.t1 |
| chr1.4 | CDS | 56565340 | 56565585 | 56565340 | ID=cds.MS.gene036059.t1;Parent=MS.gene036059.t1 |
| Gene Sequence |
| Protein sequence |
