Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036247.t1 | XP_003590693.1 | 99.8 | 417 | 1 | 0 | 1 | 417 | 1 | 417 | 2.90E-223 | 784.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036247.t1 | Q9M8J9 | 75.6 | 377 | 92 | 0 | 39 | 415 | 30 | 406 | 7.1e-170 | 598.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036247.t1 | G7I2K6 | 99.8 | 417 | 1 | 0 | 1 | 417 | 1 | 417 | 2.1e-223 | 784.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene33918 | MS.gene036247 | PPI |
| MS.gene036247 | MS.gene88846 | PPI |
| MS.gene60766 | MS.gene036247 | PPI |
| MS.gene006074 | MS.gene036247 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036247.t1 | MTR_1g072650 | 99.760 | 417 | 1 | 0 | 1 | 417 | 1 | 417 | 0.0 | 868 |
| MS.gene036247.t1 | MTR_7g094490 | 88.647 | 414 | 43 | 1 | 1 | 414 | 1 | 410 | 0.0 | 732 |
| MS.gene036247.t1 | MTR_5g087500 | 57.545 | 391 | 149 | 6 | 33 | 413 | 23 | 406 | 1.00e-154 | 443 |
| MS.gene036247.t1 | MTR_7g086500 | 56.883 | 385 | 158 | 4 | 36 | 415 | 13 | 394 | 1.46e-144 | 418 |
| MS.gene036247.t1 | MTR_5g087500 | 61.027 | 331 | 120 | 5 | 33 | 359 | 23 | 348 | 6.03e-141 | 406 |
| MS.gene036247.t1 | MTR_5g087500 | 60.486 | 329 | 122 | 4 | 33 | 357 | 23 | 347 | 1.30e-140 | 405 |
| MS.gene036247.t1 | MTR_7g086500 | 59.317 | 322 | 125 | 3 | 36 | 354 | 13 | 331 | 8.76e-128 | 373 |
| MS.gene036247.t1 | MTR_4g009630 | 60.335 | 179 | 71 | 0 | 39 | 217 | 23 | 201 | 9.50e-71 | 227 |
| MS.gene036247.t1 | MTR_4g009630 | 60.335 | 179 | 71 | 0 | 39 | 217 | 23 | 201 | 1.32e-69 | 225 |
| MS.gene036247.t1 | MTR_3g069000 | 54.595 | 185 | 84 | 0 | 204 | 388 | 51 | 235 | 3.35e-60 | 197 |
| MS.gene036247.t1 | MTR_1g104870 | 31.098 | 164 | 89 | 4 | 191 | 348 | 519 | 664 | 2.15e-15 | 78.6 |
| MS.gene036247.t1 | MTR_5g005940 | 30.435 | 161 | 94 | 3 | 191 | 348 | 516 | 661 | 3.26e-14 | 75.1 |
| MS.gene036247.t1 | MTR_7g094900 | 28.395 | 162 | 96 | 4 | 191 | 348 | 525 | 670 | 1.41e-13 | 73.2 |
| MS.gene036247.t1 | MTR_7g094910 | 28.395 | 162 | 96 | 4 | 191 | 348 | 506 | 651 | 1.81e-13 | 72.8 |
| MS.gene036247.t1 | MTR_3g088660 | 27.568 | 185 | 113 | 5 | 205 | 383 | 74 | 243 | 1.54e-12 | 67.8 |
| MS.gene036247.t1 | MTR_3g061090 | 28.289 | 152 | 94 | 3 | 201 | 350 | 83 | 221 | 1.32e-11 | 65.1 |
| MS.gene036247.t1 | MTR_3g061090 | 28.289 | 152 | 94 | 3 | 201 | 350 | 155 | 293 | 2.05e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036247.t1 | AT3G06190 | 72.616 | 409 | 108 | 1 | 7 | 415 | 2 | 406 | 0.0 | 626 |
| MS.gene036247.t1 | AT5G19000 | 72.872 | 376 | 102 | 0 | 40 | 415 | 32 | 407 | 0.0 | 593 |
| MS.gene036247.t1 | AT5G19000 | 72.872 | 376 | 102 | 0 | 40 | 415 | 32 | 407 | 0.0 | 593 |
| MS.gene036247.t1 | AT5G19000 | 66.667 | 411 | 102 | 1 | 40 | 415 | 32 | 442 | 0.0 | 577 |
| MS.gene036247.t1 | AT3G06190 | 72.857 | 350 | 91 | 1 | 7 | 356 | 2 | 347 | 0.0 | 540 |
| MS.gene036247.t1 | AT2G39760 | 60.674 | 356 | 139 | 1 | 27 | 382 | 11 | 365 | 1.77e-164 | 468 |
| MS.gene036247.t1 | AT3G03740 | 60.548 | 365 | 133 | 4 | 22 | 382 | 31 | 388 | 4.23e-153 | 441 |
| MS.gene036247.t1 | AT2G39760 | 60.976 | 328 | 127 | 1 | 27 | 354 | 11 | 337 | 4.50e-151 | 432 |
| MS.gene036247.t1 | AT2G39760 | 60.976 | 328 | 127 | 1 | 27 | 354 | 11 | 337 | 4.50e-151 | 432 |
| MS.gene036247.t1 | AT2G39760 | 60.976 | 328 | 127 | 1 | 27 | 354 | 11 | 337 | 6.73e-151 | 431 |
| MS.gene036247.t1 | AT3G43700 | 53.171 | 410 | 176 | 7 | 16 | 413 | 8 | 413 | 7.82e-146 | 421 |
| MS.gene036247.t1 | AT5G21010 | 52.068 | 411 | 181 | 6 | 15 | 413 | 2 | 408 | 5.02e-142 | 411 |
| MS.gene036247.t1 | AT3G43700 | 55.807 | 353 | 143 | 6 | 16 | 359 | 8 | 356 | 2.95e-134 | 390 |
| MS.gene036247.t1 | AT3G43700 | 56.609 | 348 | 138 | 6 | 16 | 354 | 8 | 351 | 4.92e-134 | 389 |
| MS.gene036247.t1 | AT3G06190 | 65.529 | 293 | 90 | 3 | 7 | 292 | 2 | 290 | 2.46e-133 | 385 |
| MS.gene036247.t1 | AT3G06190 | 71.538 | 260 | 70 | 1 | 7 | 266 | 2 | 257 | 6.11e-133 | 384 |
| MS.gene036247.t1 | AT3G06190 | 70.866 | 254 | 70 | 1 | 7 | 260 | 2 | 251 | 2.25e-126 | 367 |
| MS.gene036247.t1 | AT3G06190 | 59.649 | 57 | 23 | 0 | 359 | 415 | 239 | 295 | 1.54e-13 | 71.2 |
| MS.gene036247.t1 | AT5G19330 | 29.193 | 161 | 96 | 3 | 191 | 348 | 521 | 666 | 7.53e-16 | 80.1 |
| MS.gene036247.t1 | AT5G13060 | 26.368 | 201 | 133 | 3 | 189 | 388 | 546 | 732 | 3.51e-14 | 75.1 |
Find 85 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTAAGACAGTTATCTTTA+AGG | 0.101359 | 1.3:+52352485 | None:intergenic |
| CATTGCTGCATGTTATATAT+TGG | 0.221491 | 1.3:-52351317 | MS.gene036247:CDS |
| CTCTCAAAAGGGATTGGAAT+TGG | 0.250201 | 1.3:-52353507 | MS.gene036247:CDS |
| TTACTGGGATTAACTCAAAA+TGG | 0.277584 | 1.3:-52351269 | MS.gene036247:CDS |
| TCTACTATTGGTCACCAGTT+TGG | 0.278284 | 1.3:-52352391 | MS.gene036247:CDS |
| TCACCAGTTTGGGAAGCTTT+TGG | 0.292881 | 1.3:-52352380 | MS.gene036247:CDS |
| CCTGACATGCAAGAGCTTAC+TGG | 0.322826 | 1.3:-52351285 | MS.gene036247:CDS |
| CGAGTGAAGGGACTGATGTT+AGG | 0.326194 | 1.3:-52353365 | MS.gene036247:CDS |
| CCAATATCACCTTCTACTAT+TGG | 0.326476 | 1.3:-52352403 | MS.gene036247:CDS |
| CTACTATTGGTCACCAGTTT+GGG | 0.329635 | 1.3:-52352390 | MS.gene036247:CDS |
| GAACCTATGTGAGCCTTTGA+TGG | 0.352408 | 1.3:+52353548 | None:intergenic |
| CCACGATATTTCAACGTATA+AGG | 0.352677 | 1.3:+52353255 | None:intergenic |
| ATTGCTGCATGTTATATATT+GGG | 0.354568 | 1.3:-52351316 | MS.gene036247:CDS |
| ATTGGAATCGAAAATGTTCT+AGG | 0.357925 | 1.3:+52352421 | None:intergenic |
| CATCAGCCTAAGTCTATCTA+AGG | 0.367304 | 1.3:+52351197 | None:intergenic |
| CTTGATGGCAGTGATGTAAA+TGG | 0.372844 | 1.3:-52350469 | MS.gene036247:CDS |
| ATTATTTAAACCTTGAAAAC+AGG | 0.377554 | 1.3:+52352196 | None:intergenic |
| CCAATAGTAGAAGGTGATAT+TGG | 0.380995 | 1.3:+52352403 | None:intergenic |
| CCAGTAAGCTCTTGCATGTC+AGG | 0.381423 | 1.3:+52351285 | None:intergenic |
| TTTCCAAAAGCTTCCCAAAC+TGG | 0.384496 | 1.3:+52352377 | None:intergenic |
| TCACATAGGTTCAAGATAAC+GGG | 0.392891 | 1.3:-52353537 | MS.gene036247:CDS |
| CGTGGCTACAACTTTAGCTT+TGG | 0.416152 | 1.3:-52351136 | MS.gene036247:CDS |
| TCTCAAAAGGGATTGGAATT+GGG | 0.424168 | 1.3:-52353506 | MS.gene036247:CDS |
| GATGTTGAGGAGGTTGTTGA+TGG | 0.428183 | 1.3:+52353582 | None:intergenic |
| GGCTAGATTTACTGAGCATT+CGG | 0.434481 | 1.3:-52350524 | MS.gene036247:CDS |
| CACCGTTGGTGGGTACGAAT+GGG | 0.437086 | 1.3:-52353460 | MS.gene036247:CDS |
| TCACCGTTGGTGGGTACGAA+TGG | 0.438080 | 1.3:-52353461 | MS.gene036247:CDS |
| ACGGGGTATTCACTCTCAAA+AGG | 0.441675 | 1.3:-52353519 | MS.gene036247:CDS |
| TCAAACAGACTGCTTTCAGC+TGG | 0.445729 | 1.3:+52351094 | None:intergenic |
| TTCATCGCGCTTGCGAGTGA+AGG | 0.449539 | 1.3:-52353378 | MS.gene036247:CDS |
| CTCACATAGGTTCAAGATAA+CGG | 0.449878 | 1.3:-52353538 | MS.gene036247:CDS |
| AAAATGGGCAACTACCTTGA+TGG | 0.450276 | 1.3:-52351253 | MS.gene036247:CDS |
| CTGACATGCAAGAGCTTACT+GGG | 0.457209 | 1.3:-52351284 | MS.gene036247:CDS |
| TGATGGTTTCGAGTACTTGA+AGG | 0.459553 | 1.3:-52350587 | MS.gene036247:CDS |
| TGTGTGTTCTGATCTTTCAT+AGG | 0.465282 | 1.3:+52352247 | None:intergenic |
| TATTCACTCTCAAAAGGGAT+TGG | 0.480986 | 1.3:-52353513 | MS.gene036247:CDS |
| AACTGGTGACCAATAGTAGA+AGG | 0.481007 | 1.3:+52352394 | None:intergenic |
| GAGGTTGTTGATGGAATTGA+GGG | 0.492292 | 1.3:+52353591 | None:intergenic |
| GAGTGAAGGGACTGATGTTA+GGG | 0.509324 | 1.3:-52353364 | MS.gene036247:CDS |
| CTTCGTTCCTATGCTTGCAC+AGG | 0.511010 | 1.3:+52350497 | None:intergenic |
| AGATGATGATGATGAATTTG+AGG | 0.513479 | 1.3:+52353629 | None:intergenic |
| GGAGGTTGTTGATGGAATTG+AGG | 0.515360 | 1.3:+52353590 | None:intergenic |
| ATCTGCTAGCAGCAGCTGAT+CGG | 0.518356 | 1.3:-52351224 | MS.gene036247:CDS |
| TACTGGGATTAACTCAAAAT+GGG | 0.520060 | 1.3:-52351268 | MS.gene036247:CDS |
| CGGGGTATTCACTCTCAAAA+GGG | 0.521264 | 1.3:-52353518 | MS.gene036247:CDS |
| TCATCGCGCTTGCGAGTGAA+GGG | 0.522765 | 1.3:-52353377 | MS.gene036247:CDS |
| TCTGTTTGAAATTCATTGCA+AGG | 0.524584 | 1.3:-52351080 | MS.gene036247:CDS |
| AAAAGCTCAGTCAAAACAGA+TGG | 0.526627 | 1.3:+52350556 | None:intergenic |
| CTTAGTGTTAATTGTAGCGT+TGG | 0.538942 | 1.3:-52352469 | MS.gene036247:CDS |
| GATGGAATTGAGGGTGGTGA+TGG | 0.542993 | 1.3:+52353600 | None:intergenic |
| AGGAACGAAGCAATACTTGA+TGG | 0.545226 | 1.3:-52350484 | MS.gene036247:CDS |
| GAGTGGGAAAGAGAGGCATA+AGG | 0.552695 | 1.3:-52353313 | MS.gene036247:CDS |
| CTGCTTTCAGCTGGAAACAA+TGG | 0.557661 | 1.3:+52351103 | None:intergenic |
| TGGATCAGAGTGGGAAAGAG+AGG | 0.559531 | 1.3:-52353320 | MS.gene036247:CDS |
| TAGCAGATGCTGAGCCATCA+AGG | 0.560135 | 1.3:+52351239 | None:intergenic |
| TTGGAATCGAAAATGTTCTA+GGG | 0.573539 | 1.3:+52352422 | None:intergenic |
| TTTGATAGGACGTTGGAGAG+TGG | 0.581385 | 1.3:-52353279 | MS.gene036247:CDS |
| CGGACTTCCTGTGCAAGCAT+AGG | 0.582301 | 1.3:-52350504 | MS.gene036247:CDS |
| ATGTGAGCCTTTGATGGTGT+CGG | 0.584850 | 1.3:+52353554 | None:intergenic |
| GTTGTTGATGGAATTGAGGG+TGG | 0.596454 | 1.3:+52353594 | None:intergenic |
| TGAAATATCGTGGTAGCATG+TGG | 0.600425 | 1.3:-52353245 | MS.gene036247:intron |
| TCGATAACCGACACCATCAA+AGG | 0.601387 | 1.3:-52353561 | MS.gene036247:CDS |
| CAAAGCTAAAGTTGTAGCCA+CGG | 0.605118 | 1.3:+52351137 | None:intergenic |
| TCAGCTGTGATGCAAACTGA+TGG | 0.605667 | 1.3:-52350604 | MS.gene036247:intron |
| ATTGTAGCGTTGGTGTTGTG+AGG | 0.611297 | 1.3:-52352459 | MS.gene036247:CDS |
| CAGTGATGTAAATGGAAGGC+GGG | 0.613054 | 1.3:-52350461 | MS.gene036247:CDS |
| CGCCCATTCGTACCCACCAA+CGG | 0.616095 | 1.3:+52353458 | None:intergenic |
| GATGATGATGAATTTGAGGA+TGG | 0.626655 | 1.3:+52353633 | None:intergenic |
| CCTTATACGTTGAAATATCG+TGG | 0.627057 | 1.3:-52353255 | MS.gene036247:CDS |
| AAAGCTCAGTCAAAACAGAT+GGG | 0.629546 | 1.3:+52350557 | None:intergenic |
| TATAAAAGTTGAAGATATCG+AGG | 0.632506 | 1.3:-52352221 | MS.gene036247:CDS |
| ACACCATCAAAGGCTCACAT+AGG | 0.632820 | 1.3:-52353551 | MS.gene036247:CDS |
| GTCGGTTATCGATGTTGAGG+AGG | 0.637096 | 1.3:+52353572 | None:intergenic |
| GTTGTGAGGTCACACACAGA+GGG | 0.645126 | 1.3:-52352445 | MS.gene036247:CDS |
| GGTATGCCTTAGATAGACTT+AGG | 0.647862 | 1.3:-52351203 | MS.gene036247:CDS |
| CACATAGGTTCAAGATAACG+GGG | 0.658135 | 1.3:-52353536 | MS.gene036247:CDS |
| CCCTGATGGGAAAAGCGTGG+AGG | 0.667337 | 1.3:-52353424 | MS.gene036247:CDS |
| TTACCCTGATGGGAAAAGCG+TGG | 0.670712 | 1.3:-52353427 | MS.gene036247:CDS |
| ATGGCAGTGATGTAAATGGA+AGG | 0.702793 | 1.3:-52350465 | MS.gene036247:CDS |
| AGATGTTGCAATAAATACCG+TGG | 0.705274 | 1.3:-52351154 | MS.gene036247:CDS |
| GCAGTGATGTAAATGGAAGG+CGG | 0.707656 | 1.3:-52350462 | MS.gene036247:CDS |
| GGTGTCGGTTATCGATGTTG+AGG | 0.707765 | 1.3:+52353569 | None:intergenic |
| TGTTGTGAGGTCACACACAG+AGG | 0.714300 | 1.3:-52352446 | MS.gene036247:CDS |
| GCAAGGCCTGAAAATCTCAG+AGG | 0.724609 | 1.3:-52351063 | MS.gene036247:intron |
| AGATTCTTCGAGAAACAACG+AGG | 0.757753 | 1.3:-52353656 | MS.gene036247:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGCTTAACAATTATAATAA+GGG | + | chr1.3:52352059-52352078 | None:intergenic | 15.0% |
| !! | TATGCTTAACAATTATAATA+AGG | + | chr1.3:52352060-52352079 | None:intergenic | 15.0% |
| !! | TCAAAATAGAGAAAAAAATA+TGG | + | chr1.3:52352755-52352774 | None:intergenic | 15.0% |
| !! | TTATAAGAAAGATGAAAATT+TGG | - | chr1.3:52351132-52351151 | MS.gene036247:CDS | 15.0% |
| !!! | AATGTTGATAAAAAAAATAG+AGG | + | chr1.3:52352323-52352342 | None:intergenic | 15.0% |
| !!! | TATTTTTTTCTCTATTTTGA+AGG | - | chr1.3:52352755-52352774 | MS.gene036247:intron | 15.0% |
| !! | AAAAATATGTGCAATATTAG+GGG | - | chr1.3:52353106-52353125 | MS.gene036247:intron | 20.0% |
| !! | AGAAAAATATGTGCAATATT+AGG | - | chr1.3:52353104-52353123 | MS.gene036247:intron | 20.0% |
| !! | AGAACACAACAATAAAAATA+TGG | - | chr1.3:52352280-52352299 | MS.gene036247:CDS | 20.0% |
| !! | ATTATTTAAACCTTGAAAAC+AGG | + | chr1.3:52351902-52351921 | None:intergenic | 20.0% |
| !! | GAAAAATATGTGCAATATTA+GGG | - | chr1.3:52353105-52353124 | MS.gene036247:intron | 20.0% |
| !! | TAAAGGAAATAAAATCAGAA+AGG | + | chr1.3:52352523-52352542 | None:intergenic | 20.0% |
| !! | TCTAATTCTTATTAAACCAT+TGG | - | chr1.3:52352583-52352602 | MS.gene036247:intron | 20.0% |
| !! | TCTTTATACCAATTAACATT+TGG | + | chr1.3:52352375-52352394 | None:intergenic | 20.0% |
| !! | TGCTTAACAATTATAATAAG+GGG | + | chr1.3:52352058-52352077 | None:intergenic | 20.0% |
| !!! | ATTACTTTGAGTTATTTAAG+GGG | + | chr1.3:52351374-52351393 | None:intergenic | 20.0% |
| !!! | ATTGTTTTAAATTGTGTTTC+AGG | - | chr1.3:52351540-52351559 | MS.gene036247:intron | 20.0% |
| !!! | ATTTTATTTCCTTTATTGCT+TGG | - | chr1.3:52352528-52352547 | MS.gene036247:CDS | 20.0% |
| !!! | CATTACTTTGAGTTATTTAA+GGG | + | chr1.3:52351375-52351394 | None:intergenic | 20.0% |
| !!! | GTTCTTAAACTCTTTTAATT+AGG | - | chr1.3:52353321-52353340 | MS.gene036247:CDS | 20.0% |
| !!! | TTGTTTTAAATTGTGTTTCA+GGG | - | chr1.3:52351541-52351560 | MS.gene036247:intron | 20.0% |
| ! | AAATCAACAAATCCATTCAA+TGG | + | chr1.3:52351437-52351456 | None:intergenic | 25.0% |
| ! | AATCAACAAATCCATTCAAT+GGG | + | chr1.3:52351436-52351455 | None:intergenic | 25.0% |
| ! | AATTTATACAAGAACTTGTG+GGG | + | chr1.3:52352477-52352496 | None:intergenic | 25.0% |
| ! | ACATGTTTGCAAAAAAACAT+TGG | - | chr1.3:52352146-52352165 | MS.gene036247:intron | 25.0% |
| ! | ATGTTAATTGGTATAAAGAC+TGG | - | chr1.3:52352376-52352395 | MS.gene036247:CDS | 25.0% |
| ! | ATTGCTGCATGTTATATATT+GGG | - | chr1.3:52352779-52352798 | MS.gene036247:intron | 25.0% |
| ! | CAATTTATACAAGAACTTGT+GGG | + | chr1.3:52352478-52352497 | None:intergenic | 25.0% |
| ! | CCTTAAATAACTCAAAGTAA+TGG | - | chr1.3:52351373-52351392 | MS.gene036247:intron | 25.0% |
| ! | GAAGTTTAATAACATGCATA+TGG | - | chr1.3:52352702-52352721 | MS.gene036247:intron | 25.0% |
| ! | TATAAAAGTTGAAGATATCG+AGG | - | chr1.3:52351874-52351893 | MS.gene036247:intron | 25.0% |
| ! | TCAATTTATACAAGAACTTG+TGG | + | chr1.3:52352479-52352498 | None:intergenic | 25.0% |
| ! | TTATACCAATTAACATTTGG+AGG | + | chr1.3:52352372-52352391 | None:intergenic | 25.0% |
| !! | AATACTTCAGTTGATATCAT+AGG | + | chr1.3:52353453-52353472 | None:intergenic | 25.0% |
| !! | CCATTACTTTGAGTTATTTA+AGG | + | chr1.3:52351376-52351395 | None:intergenic | 25.0% |
| !!! | AAACGTTTGATTCGTTTTTT+GGG | - | chr1.3:52351308-52351327 | MS.gene036247:CDS | 25.0% |
| !!! | TGTTTTAAATTGTGTTTCAG+GGG | - | chr1.3:52351542-52351561 | MS.gene036247:intron | 25.0% |
| !!! | TTGAATGGATTTGTTGATTT+TGG | - | chr1.3:52351437-52351456 | MS.gene036247:intron | 25.0% |
| AAATCAAGCTTAGTGACTTT+GGG | - | chr1.3:52353279-52353298 | MS.gene036247:CDS | 30.0% | |
| AATTAGGATGCTGTATATGA+TGG | - | chr1.3:52353337-52353356 | MS.gene036247:CDS | 30.0% | |
| ACTTGTGTTTAATGTGTTTG+TGG | - | chr1.3:52352660-52352679 | MS.gene036247:intron | 30.0% | |
| ATACAAATTTACCAACGCTT+TGG | + | chr1.3:52353378-52353397 | None:intergenic | 30.0% | |
| ATAGTCTAACTTCAAAACCA+AGG | + | chr1.3:52351351-52351370 | None:intergenic | 30.0% | |
| ATCACAGCTGAAAAAAAGAA+AGG | + | chr1.3:52353482-52353501 | None:intergenic | 30.0% | |
| ATTGGAATCGAAAATGTTCT+AGG | + | chr1.3:52351677-52351696 | None:intergenic | 30.0% | |
| CACTAAGACAGTTATCTTTA+AGG | + | chr1.3:52351613-52351632 | None:intergenic | 30.0% | |
| CATTGCTGCATGTTATATAT+TGG | - | chr1.3:52352778-52352797 | MS.gene036247:intron | 30.0% | |
| CGAAGTTCAATATCTATATC+AGG | + | chr1.3:52352017-52352036 | None:intergenic | 30.0% | |
| TACAAATTTACCAACGCTTT+GGG | + | chr1.3:52353377-52353396 | None:intergenic | 30.0% | |
| TACTGGGATTAACTCAAAAT+GGG | - | chr1.3:52352827-52352846 | MS.gene036247:intron | 30.0% | |
| TCACAGCTGAAAAAAAGAAA+GGG | + | chr1.3:52353481-52353500 | None:intergenic | 30.0% | |
| TGATTCTAATTCCTTATCGA+GGG | - | chr1.3:52350941-52350960 | MS.gene036247:intron | 30.0% | |
| TTACATACTTATGCTTCTGT+GGG | - | chr1.3:52351093-52351112 | MS.gene036247:CDS | 30.0% | |
| TTACTGGGATTAACTCAAAA+TGG | - | chr1.3:52352826-52352845 | MS.gene036247:intron | 30.0% | |
| TTATGCCTCCAAATGTTAAT+TGG | - | chr1.3:52352364-52352383 | MS.gene036247:CDS | 30.0% | |
| TTCTGAACATTGTTGGAAAA+GGG | - | chr1.3:52351198-52351217 | MS.gene036247:CDS | 30.0% | |
| TTGGAATCGAAAATGTTCTA+GGG | + | chr1.3:52351676-52351695 | None:intergenic | 30.0% | |
| ! | AATTTTTGCGGCTCATAAAT+TGG | - | chr1.3:52351781-52351800 | MS.gene036247:intron | 30.0% |
| ! | AGATGATGATGATGAATTTG+AGG | + | chr1.3:52350469-52350488 | None:intergenic | 30.0% |
| ! | AGTGAATGGTGAAATTTTTG+CGG | - | chr1.3:52351769-52351788 | MS.gene036247:intron | 30.0% |
| ! | CGTATGCTTATGCTTTATTA+AGG | - | chr1.3:52353218-52353237 | MS.gene036247:intron | 30.0% |
| ! | GCTTTTTGAATTAACGCTTT+TGG | - | chr1.3:52350755-52350774 | MS.gene036247:intron | 30.0% |
| ! | GGAATGATAGGAATTTTTAC+TGG | - | chr1.3:52351062-52351081 | MS.gene036247:intron | 30.0% |
| ! | TCTGTTTGAAATTCATTGCA+AGG | - | chr1.3:52353015-52353034 | MS.gene036247:intron | 30.0% |
| !! | AGGTTCATAGTCATTTTGAT+AGG | - | chr1.3:52350802-52350821 | MS.gene036247:intron | 30.0% |
| !!! | AACGTTTGATTCGTTTTTTG+GGG | - | chr1.3:52351309-52351328 | MS.gene036247:CDS | 30.0% |
| !!! | ACTGGTATTTTTTCAGATTG+AGG | - | chr1.3:52352394-52352413 | MS.gene036247:CDS | 30.0% |
| !!! | ATGGAACTTTTTTGTGACAA+TGG | - | chr1.3:52351492-52351511 | MS.gene036247:intron | 30.0% |
| !!! | CAAACGTTTGATTCGTTTTT+TGG | - | chr1.3:52351307-52351326 | MS.gene036247:CDS | 30.0% |
| !!! | CGATTTATTTTTACCCTGAT+GGG | - | chr1.3:52350658-52350677 | MS.gene036247:intron | 30.0% |
| !!! | GATGTGAATTTTGAAGTGAA+TGG | - | chr1.3:52351755-52351774 | MS.gene036247:intron | 30.0% |
| !!! | TGGATTTGTTGATTTTGGTT+TGG | - | chr1.3:52351442-52351461 | MS.gene036247:intron | 30.0% |
| AAAAGCTCAGTCAAAACAGA+TGG | + | chr1.3:52353542-52353561 | None:intergenic | 35.0% | |
| AAACAGGAACCAAGCAATAA+AGG | + | chr1.3:52352540-52352559 | None:intergenic | 35.0% | |
| AAAGCTCAGTCAAAACAGAT+GGG | + | chr1.3:52353541-52353560 | None:intergenic | 35.0% | |
| AGATGTTGCAATAAATACCG+TGG | - | chr1.3:52352941-52352960 | MS.gene036247:intron | 35.0% | |
| ATAGCAACATACAGACTTTC+AGG | + | chr1.3:52353150-52353169 | None:intergenic | 35.0% | |
| ATATACTCGCAAATTGCAAC+TGG | + | chr1.3:52352218-52352237 | None:intergenic | 35.0% | |
| ATATCAGGACAGAGACAAAA+AGG | + | chr1.3:52352002-52352021 | None:intergenic | 35.0% | |
| ATGTGCAATATTAGGGGAAT+TGG | - | chr1.3:52353112-52353131 | MS.gene036247:intron | 35.0% | |
| CAAATCAAGCTTAGTGACTT+TGG | - | chr1.3:52353278-52353297 | MS.gene036247:CDS | 35.0% | |
| CATTCCAAGTTACCAACATT+GGG | + | chr1.3:52351048-52351067 | None:intergenic | 35.0% | |
| CCAATAGTAGAAGGTGATAT+TGG | + | chr1.3:52351695-52351714 | None:intergenic | 35.0% | |
| CCAATATCACCTTCTACTAT+TGG | - | chr1.3:52351692-52351711 | MS.gene036247:intron | 35.0% | |
| CCACGATATTTCAACGTATA+AGG | + | chr1.3:52350843-52350862 | None:intergenic | 35.0% | |
| CCTTATACGTTGAAATATCG+TGG | - | chr1.3:52350840-52350859 | MS.gene036247:intron | 35.0% | |
| CTCACATAGGTTCAAGATAA+CGG | - | chr1.3:52350557-52350576 | MS.gene036247:CDS | 35.0% | |
| CTGATTCTAATTCCTTATCG+AGG | - | chr1.3:52350940-52350959 | MS.gene036247:intron | 35.0% | |
| CTTAGTGTTAATTGTAGCGT+TGG | - | chr1.3:52351626-52351645 | MS.gene036247:intron | 35.0% | |
| GGTCTGGATGAAGAATAAAT+AGG | + | chr1.3:52353432-52353451 | None:intergenic | 35.0% | |
| GTTACATACTTATGCTTCTG+TGG | - | chr1.3:52351092-52351111 | MS.gene036247:CDS | 35.0% | |
| TATTCACTCTCAAAAGGGAT+TGG | - | chr1.3:52350582-52350601 | MS.gene036247:CDS | 35.0% | |
| TCACATAGGTTCAAGATAAC+GGG | - | chr1.3:52350558-52350577 | MS.gene036247:CDS | 35.0% | |
| TCATTCCAAGTTACCAACAT+TGG | + | chr1.3:52351049-52351068 | None:intergenic | 35.0% | |
| TCTCAAAAGGGATTGGAATT+GGG | - | chr1.3:52350589-52350608 | MS.gene036247:CDS | 35.0% | |
| TCTGAACATTGTTGGAAAAG+GGG | - | chr1.3:52351199-52351218 | MS.gene036247:CDS | 35.0% | |
| TGTGCAATATTAGGGGAATT+GGG | - | chr1.3:52353113-52353132 | MS.gene036247:intron | 35.0% | |
| TGTGTGTTCTGATCTTTCAT+AGG | + | chr1.3:52351851-52351870 | None:intergenic | 35.0% | |
| TGTTTGTGAAGGTTTAAGCT+TGG | - | chr1.3:52350967-52350986 | MS.gene036247:intron | 35.0% | |
| TTCTTGAATTGACCCAATGT+TGG | - | chr1.3:52351033-52351052 | MS.gene036247:intron | 35.0% | |
| TTGCGAGTATATTTGACTGT+TGG | - | chr1.3:52352226-52352245 | MS.gene036247:CDS | 35.0% | |
| ! | AACATTTGGAGGCATAAATG+AGG | + | chr1.3:52352361-52352380 | None:intergenic | 35.0% |
| ! | ACATTTGGAGGCATAAATGA+GGG | + | chr1.3:52352360-52352379 | None:intergenic | 35.0% |
| ! | GATGATGATGAATTTGAGGA+TGG | + | chr1.3:52350465-52350484 | None:intergenic | 35.0% |
| ! | GTTCTGAACATTGTTGGAAA+AGG | - | chr1.3:52351197-52351216 | MS.gene036247:CDS | 35.0% |
| ! | TGAAGTGTTCTGAACATTGT+TGG | - | chr1.3:52351191-52351210 | MS.gene036247:CDS | 35.0% |
| ! | TTCAGTTGATATCATAGGTC+TGG | + | chr1.3:52353448-52353467 | None:intergenic | 35.0% |
| !! | AAAAGCTGAGCTCTAAAAAC+AGG | + | chr1.3:52351824-52351843 | None:intergenic | 35.0% |
| !! | GAAGAGGTACAGTTTTCTAA+AGG | - | chr1.3:52351514-52351533 | MS.gene036247:intron | 35.0% |
| !! | TAGTCATTTTGATAGGACGT+TGG | - | chr1.3:52350809-52350828 | MS.gene036247:intron | 35.0% |
| !! | TGTTGGTAACTTGGAATGAT+AGG | - | chr1.3:52351050-52351069 | MS.gene036247:intron | 35.0% |
| !!! | ACGTTTGATTCGTTTTTTGG+GGG | - | chr1.3:52351310-52351329 | MS.gene036247:CDS | 35.0% |
| !!! | ATCTGTTTTGACTGAGCTTT+TGG | - | chr1.3:52353541-52353560 | MS.gene036247:CDS | 35.0% |
| !!! | CTTTTTTGTGACAATGGAAG+AGG | - | chr1.3:52351498-52351517 | MS.gene036247:intron | 35.0% |
| !!! | GCGATTTATTTTTACCCTGA+TGG | - | chr1.3:52350657-52350676 | MS.gene036247:intron | 35.0% |
| !!! | GTTTTTAGAGCTCAGCTTTT+TGG | - | chr1.3:52351824-52351843 | MS.gene036247:intron | 35.0% |
| AAAATGGGCAACTACCTTGA+TGG | - | chr1.3:52352842-52352861 | MS.gene036247:intron | 40.0% | |
| AAACTGCAGAAAGTCAAAGG+CGG | + | chr1.3:52352618-52352637 | None:intergenic | 40.0% | |
| AACTGGTGACCAATAGTAGA+AGG | + | chr1.3:52351704-52351723 | None:intergenic | 40.0% | |
| AAGGCGGTTTGAAAAACCAA+TGG | + | chr1.3:52352602-52352621 | None:intergenic | 40.0% | |
| AGATTCTTCGAGAAACAACG+AGG | - | chr1.3:52350439-52350458 | MS.gene036247:CDS | 40.0% | |
| AGCATACGATAGTCAACAAC+AGG | + | chr1.3:52353206-52353225 | None:intergenic | 40.0% | |
| AGGAACGAAGCAATACTTGA+TGG | - | chr1.3:52353611-52353630 | MS.gene036247:CDS | 40.0% | |
| AGGGGAATTGGGACATTAAA+AGG | - | chr1.3:52353124-52353143 | MS.gene036247:intron | 40.0% | |
| ATGGCAGTGATGTAAATGGA+AGG | - | chr1.3:52353630-52353649 | MS.gene036247:CDS | 40.0% | |
| CAAAGCTAAAGTTGTAGCCA+CGG | + | chr1.3:52352961-52352980 | None:intergenic | 40.0% | |
| CACATAGGTTCAAGATAACG+GGG | - | chr1.3:52350559-52350578 | MS.gene036247:CDS | 40.0% | |
| CATCAGCCTAAGTCTATCTA+AGG | + | chr1.3:52352901-52352920 | None:intergenic | 40.0% | |
| CGTAAACTGCAGAAAGTCAA+AGG | + | chr1.3:52352621-52352640 | None:intergenic | 40.0% | |
| CTACTATTGGTCACCAGTTT+GGG | - | chr1.3:52351705-52351724 | MS.gene036247:intron | 40.0% | |
| CTCTCAAAAGGGATTGGAAT+TGG | - | chr1.3:52350588-52350607 | MS.gene036247:CDS | 40.0% | |
| CTGAACATTGTTGGAAAAGG+GGG | - | chr1.3:52351200-52351219 | MS.gene036247:CDS | 40.0% | |
| GCTAGAACAACTCAACAAAC+AGG | + | chr1.3:52352556-52352575 | None:intergenic | 40.0% | |
| GGCTAGATTTACTGAGCATT+CGG | - | chr1.3:52353571-52353590 | MS.gene036247:CDS | 40.0% | |
| GGTATGCCTTAGATAGACTT+AGG | - | chr1.3:52352892-52352911 | MS.gene036247:intron | 40.0% | |
| GTTCACTGAGATGTGAGATT+TGG | - | chr1.3:52352419-52352438 | MS.gene036247:CDS | 40.0% | |
| TCTACTATTGGTCACCAGTT+TGG | - | chr1.3:52351704-52351723 | MS.gene036247:intron | 40.0% | |
| TGAAATATCGTGGTAGCATG+TGG | - | chr1.3:52350850-52350869 | MS.gene036247:intron | 40.0% | |
| TGAACATTGTTGGAAAAGGG+GGG | - | chr1.3:52351201-52351220 | MS.gene036247:CDS | 40.0% | |
| TGTGAAGGTTTAAGCTTGGT+GGG | - | chr1.3:52350971-52350990 | MS.gene036247:intron | 40.0% | |
| TTCCATGAACTCAATTCAGC+AGG | + | chr1.3:52351478-52351497 | None:intergenic | 40.0% | |
| TTCCTGCTGAATTGAGTTCA+TGG | - | chr1.3:52351473-52351492 | MS.gene036247:intron | 40.0% | |
| TTGTGAAGGTTTAAGCTTGG+TGG | - | chr1.3:52350970-52350989 | MS.gene036247:intron | 40.0% | |
| TTTCCAAAAGCTTCCCAAAC+TGG | + | chr1.3:52351721-52351740 | None:intergenic | 40.0% | |
| ! | CTTGATGGCAGTGATGTAAA+TGG | - | chr1.3:52353626-52353645 | MS.gene036247:CDS | 40.0% |
| ! | GAGGTTGTTGATGGAATTGA+GGG | + | chr1.3:52350507-52350526 | None:intergenic | 40.0% |
| ! | GTTTGTTGAGTTGTTCTAGC+TGG | - | chr1.3:52352556-52352575 | MS.gene036247:intron | 40.0% |
| ! | TAACGCTTTTGGATCAGAGT+GGG | - | chr1.3:52350766-52350785 | MS.gene036247:intron | 40.0% |
| ! | TACAGTTTTACCCAAAGCGT+TGG | - | chr1.3:52353364-52353383 | MS.gene036247:CDS | 40.0% |
| ! | TGATGGTTTCGAGTACTTGA+AGG | - | chr1.3:52353508-52353527 | MS.gene036247:CDS | 40.0% |
| ! | TTAACGCTTTTGGATCAGAG+TGG | - | chr1.3:52350765-52350784 | MS.gene036247:intron | 40.0% |
| !! | GTTTGTTGTCTCCCATTGAA+TGG | - | chr1.3:52351422-52351441 | MS.gene036247:intron | 40.0% |
| !! | TTGACCCAATGTTGGTAACT+TGG | - | chr1.3:52351041-52351060 | MS.gene036247:intron | 40.0% |
| !! | TTTGGGAAGCTTTTGGAAAG+TGG | - | chr1.3:52351722-52351741 | MS.gene036247:intron | 40.0% |
| !!! | AACACACCTCTGAGATTTTC+AGG | + | chr1.3:52353041-52353060 | None:intergenic | 40.0% |
| !!! | TTGATTCGTTTTTTGGGGGT+GGG | - | chr1.3:52351314-52351333 | MS.gene036247:CDS | 40.0% |
| !!! | TTTGATTCGTTTTTTGGGGG+TGG | - | chr1.3:52351313-52351332 | MS.gene036247:CDS | 40.0% |
| ACACCATCAAAGGCTCACAT+AGG | - | chr1.3:52350544-52350563 | MS.gene036247:CDS | 45.0% | |
| ATCGAGGGTAGTGTTTGTGA+AGG | - | chr1.3:52350956-52350975 | MS.gene036247:intron | 45.0% | |
| CACAAACACTACCCTCGATA+AGG | + | chr1.3:52350955-52350974 | None:intergenic | 45.0% | |
| CAGTGATGTAAATGGAAGGC+GGG | - | chr1.3:52353634-52353653 | MS.gene036247:CDS | 45.0% | |
| CTGACATGCAAGAGCTTACT+GGG | - | chr1.3:52352811-52352830 | MS.gene036247:intron | 45.0% | |
| CTGCTTTCAGCTGGAAACAA+TGG | + | chr1.3:52352995-52353014 | None:intergenic | 45.0% | |
| GAACCTATGTGAGCCTTTGA+TGG | + | chr1.3:52350550-52350569 | None:intergenic | 45.0% | |
| GAGTGAAGGGACTGATGTTA+GGG | - | chr1.3:52350731-52350750 | MS.gene036247:intron | 45.0% | |
| GATGTTGAGGAGGTTGTTGA+TGG | + | chr1.3:52350516-52350535 | None:intergenic | 45.0% | |
| GCAGTGATGTAAATGGAAGG+CGG | - | chr1.3:52353633-52353652 | MS.gene036247:CDS | 45.0% | |
| TCAAACAGACTGCTTTCAGC+TGG | + | chr1.3:52353004-52353023 | None:intergenic | 45.0% | |
| TCAGCTGTGATGCAAACTGA+TGG | - | chr1.3:52353491-52353510 | MS.gene036247:CDS | 45.0% | |
| TCGATAACCGACACCATCAA+AGG | - | chr1.3:52350534-52350553 | MS.gene036247:CDS | 45.0% | |
| TCGCAAATTGCAACTGGCAA+GGG | + | chr1.3:52352212-52352231 | None:intergenic | 45.0% | |
| TTTGATAGGACGTTGGAGAG+TGG | - | chr1.3:52350816-52350835 | MS.gene036247:intron | 45.0% | |
| ! | ACGGGGTATTCACTCTCAAA+AGG | - | chr1.3:52350576-52350595 | MS.gene036247:CDS | 45.0% |
| ! | CGGGGTATTCACTCTCAAAA+GGG | - | chr1.3:52350577-52350596 | MS.gene036247:CDS | 45.0% |
| ! | CGTGGCTACAACTTTAGCTT+TGG | - | chr1.3:52352959-52352978 | MS.gene036247:intron | 45.0% |
| ! | CTGAGATTTTCACCGTTGGT+GGG | - | chr1.3:52350625-52350644 | MS.gene036247:intron | 45.0% |
| ! | GGAGGTTGTTGATGGAATTG+AGG | + | chr1.3:52350508-52350527 | None:intergenic | 45.0% |
| ! | GTTGTTGATGGAATTGAGGG+TGG | + | chr1.3:52350504-52350523 | None:intergenic | 45.0% |
| ! | TATCGAGGCTCCTGTTTTCA+AGG | - | chr1.3:52351889-52351908 | MS.gene036247:intron | 45.0% |
| ! | TCACCAGTTTGGGAAGCTTT+TGG | - | chr1.3:52351715-52351734 | MS.gene036247:intron | 45.0% |
| !! | ATGTGAGCCTTTGATGGTGT+CGG | + | chr1.3:52350544-52350563 | None:intergenic | 45.0% |
| !! | ATTGTAGCGTTGGTGTTGTG+AGG | - | chr1.3:52351636-52351655 | MS.gene036247:intron | 45.0% |
| !! | GCATCTGAGATTTTCACCGT+TGG | - | chr1.3:52350621-52350640 | MS.gene036247:intron | 45.0% |
| !! | TCTGAGATTTTCACCGTTGG+TGG | - | chr1.3:52350624-52350643 | MS.gene036247:intron | 45.0% |
| !!! | GACTGAGCTTTTGGAGTATG+TGG | - | chr1.3:52353550-52353569 | MS.gene036247:CDS | 45.0% |
| !!! | TGATTCGTTTTTTGGGGGTG+GGG | - | chr1.3:52351315-52351334 | MS.gene036247:CDS | 45.0% |
| AACTAATGCCAGAAGCAGGC+AGG | + | chr1.3:52352109-52352128 | None:intergenic | 50.0% | |
| ACCCAACTAATGCCAGAAGC+AGG | + | chr1.3:52352113-52352132 | None:intergenic | 50.0% | |
| ATCTGCTAGCAGCAGCTGAT+CGG | - | chr1.3:52352871-52352890 | MS.gene036247:intron | 50.0% | |
| CAAATTGCAACTGGCAAGGG+TGG | + | chr1.3:52352209-52352228 | None:intergenic | 50.0% | |
| CCAGTAAGCTCTTGCATGTC+AGG | + | chr1.3:52352813-52352832 | None:intergenic | 50.0% | |
| CCTGACATGCAAGAGCTTAC+TGG | - | chr1.3:52352810-52352829 | MS.gene036247:intron | 50.0% | |
| CGAGTGAAGGGACTGATGTT+AGG | - | chr1.3:52350730-52350749 | MS.gene036247:intron | 50.0% | |
| CTCGCAAATTGCAACTGGCA+AGG | + | chr1.3:52352213-52352232 | None:intergenic | 50.0% | |
| CTTCGTTCCTATGCTTGCAC+AGG | + | chr1.3:52353601-52353620 | None:intergenic | 50.0% | |
| GAGGCATAAATGAGGGAAGC+GGG | + | chr1.3:52352353-52352372 | None:intergenic | 50.0% | |
| GATGGAATTGAGGGTGGTGA+TGG | + | chr1.3:52350498-52350517 | None:intergenic | 50.0% | |
| GCAAGGCCTGAAAATCTCAG+AGG | - | chr1.3:52353032-52353051 | MS.gene036247:intron | 50.0% | |
| GCCTGCTTCTGGCATTAGTT+GGG | - | chr1.3:52352109-52352128 | MS.gene036247:intron | 50.0% | |
| GTCGGTTATCGATGTTGAGG+AGG | + | chr1.3:52350526-52350545 | None:intergenic | 50.0% | |
| GTTGTGAGGTCACACACAGA+GGG | - | chr1.3:52351650-52351669 | MS.gene036247:intron | 50.0% | |
| TAGCAGATGCTGAGCCATCA+AGG | + | chr1.3:52352859-52352878 | None:intergenic | 50.0% | |
| TGCCTGCTTCTGGCATTAGT+TGG | - | chr1.3:52352108-52352127 | MS.gene036247:intron | 50.0% | |
| TGGATCAGAGTGGGAAAGAG+AGG | - | chr1.3:52350775-52350794 | MS.gene036247:intron | 50.0% | |
| TGTTGGAAAAGGGGGGTGAA+AGG | - | chr1.3:52351208-52351227 | MS.gene036247:CDS | 50.0% | |
| TGTTGTGAGGTCACACACAG+AGG | - | chr1.3:52351649-52351668 | MS.gene036247:intron | 50.0% | |
| TTACCCTGATGGGAAAAGCG+TGG | - | chr1.3:52350668-52350687 | MS.gene036247:intron | 50.0% | |
| ! | GAGTGGGAAAGAGAGGCATA+AGG | - | chr1.3:52350782-52350801 | MS.gene036247:intron | 50.0% |
| ! | GGAGGCATAAATGAGGGAAG+CGG | + | chr1.3:52352354-52352373 | None:intergenic | 50.0% |
| !! | GGTGTCGGTTATCGATGTTG+AGG | + | chr1.3:52350529-52350548 | None:intergenic | 50.0% |
| ATGCCAGAAGCAGGCAGGAT+TGG | + | chr1.3:52352104-52352123 | None:intergenic | 55.0% | |
| CGGACTTCCTGTGCAAGCAT+AGG | - | chr1.3:52353591-52353610 | MS.gene036247:CDS | 55.0% | |
| GGCAGGATTGGGCACTAAGT+TGG | + | chr1.3:52352092-52352111 | None:intergenic | 55.0% | |
| TCATCGCGCTTGCGAGTGAA+GGG | - | chr1.3:52350718-52350737 | MS.gene036247:intron | 55.0% | |
| TGCCAGAAGCAGGCAGGATT+GGG | + | chr1.3:52352103-52352122 | None:intergenic | 55.0% | |
| TTCATCGCGCTTGCGAGTGA+AGG | - | chr1.3:52350717-52350736 | MS.gene036247:intron | 55.0% | |
| ! | CACCGTTGGTGGGTACGAAT+GGG | - | chr1.3:52350635-52350654 | MS.gene036247:intron | 55.0% |
| ! | CCTCCACGCTTTTCCCATCA+GGG | + | chr1.3:52350674-52350693 | None:intergenic | 55.0% |
| ! | TCACCGTTGGTGGGTACGAA+TGG | - | chr1.3:52350634-52350653 | MS.gene036247:intron | 55.0% |
| ! | TCCTCCACGCTTTTCCCATC+AGG | + | chr1.3:52350675-52350694 | None:intergenic | 55.0% |
| !!! | TCGTTTTTTGGGGGTGGGGT+GGG | - | chr1.3:52351319-52351338 | MS.gene036247:CDS | 55.0% |
| !!! | TTCGTTTTTTGGGGGTGGGG+TGG | - | chr1.3:52351318-52351337 | MS.gene036247:CDS | 55.0% |
| CGCCCATTCGTACCCACCAA+CGG | + | chr1.3:52350640-52350659 | None:intergenic | 60.0% | |
| TGCCCAATCCTGCCTGCTTC+TGG | - | chr1.3:52352098-52352117 | MS.gene036247:intron | 60.0% | |
| ! | CCCTGATGGGAAAAGCGTGG+AGG | - | chr1.3:52350671-52350690 | MS.gene036247:intron | 60.0% |
| TTTGGGGGTGGGGTGGGAGA+GGG | - | chr1.3:52351325-52351344 | MS.gene036247:intron | 65.0% | |
| !! | TTTTGGGGGTGGGGTGGGAG+AGG | - | chr1.3:52351324-52351343 | MS.gene036247:intron | 65.0% |
| GGTGGGGTGGGAGAGGGCCT+TGG | - | chr1.3:52351331-52351350 | MS.gene036247:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 52350432 | 52353685 | 52350432 | ID=MS.gene036247 |
| chr1.3 | mRNA | 52350432 | 52353685 | 52350432 | ID=MS.gene036247.t1;Parent=MS.gene036247 |
| chr1.3 | exon | 52353246 | 52353685 | 52353246 | ID=MS.gene036247.t1.exon1;Parent=MS.gene036247.t1 |
| chr1.3 | CDS | 52353246 | 52353685 | 52353246 | ID=cds.MS.gene036247.t1;Parent=MS.gene036247.t1 |
| chr1.3 | exon | 52352207 | 52352555 | 52352207 | ID=MS.gene036247.t1.exon2;Parent=MS.gene036247.t1 |
| chr1.3 | CDS | 52352207 | 52352555 | 52352207 | ID=cds.MS.gene036247.t1;Parent=MS.gene036247.t1 |
| chr1.3 | exon | 52351064 | 52351340 | 52351064 | ID=MS.gene036247.t1.exon3;Parent=MS.gene036247.t1 |
| chr1.3 | CDS | 52351064 | 52351340 | 52351064 | ID=cds.MS.gene036247.t1;Parent=MS.gene036247.t1 |
| chr1.3 | exon | 52350432 | 52350622 | 52350432 | ID=MS.gene036247.t1.exon4;Parent=MS.gene036247.t1 |
| chr1.3 | CDS | 52350432 | 52350622 | 52350432 | ID=cds.MS.gene036247.t1;Parent=MS.gene036247.t1 |
| Gene Sequence |
| Protein sequence |
