Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036611.t1 | XP_013458166.1 | 100 | 145 | 0 | 0 | 1 | 145 | 1 | 145 | 9.10E-84 | 319.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036611.t1 | Q65WT0 | 88.3 | 145 | 17 | 0 | 1 | 145 | 1 | 145 | 5.8e-79 | 294.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036611.t1 | A0A072UR78 | 100.0 | 145 | 0 | 0 | 1 | 145 | 1 | 145 | 6.6e-84 | 319.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene036611 | MS.gene83541 | PPI |
| MS.gene036611 | MS.gene86409 | PPI |
| MS.gene067412 | MS.gene036611 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036611.t1 | MTR_4g117260 | 100.000 | 145 | 0 | 0 | 1 | 145 | 1 | 145 | 1.44e-106 | 300 |
| MS.gene036611.t1 | MTR_8g083120 | 96.552 | 145 | 5 | 0 | 1 | 145 | 1 | 145 | 2.37e-104 | 294 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036611.t1 | AT4G21110 | 86.207 | 145 | 20 | 0 | 1 | 145 | 1 | 145 | 5.83e-95 | 270 |
| MS.gene036611.t1 | AT4G21110 | 86.207 | 145 | 20 | 0 | 1 | 145 | 1 | 145 | 5.83e-95 | 270 |
Find 40 sgRNAs with CRISPR-Local
Find 128 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGAAATTTCCTTTCTCTTA+TGG | 0.231250 | 8.4:-13247938 | None:intergenic |
| TCAATTAATTCCCAGCCTTC+TGG | 0.234580 | 8.4:-13247680 | None:intergenic |
| TTCTCCTCCCTGAGCTCCTT+GGG | 0.301872 | 8.4:-13249374 | None:intergenic |
| CAAATACATAGCGGCTCTTC+TGG | 0.318337 | 8.4:-13247908 | None:intergenic |
| ACTCGGCTTGTCTTTACTTT+CGG | 0.326256 | 8.4:-13247650 | None:intergenic |
| CTTCTCCTCCCTGAGCTCCT+TGG | 0.345032 | 8.4:-13249375 | None:intergenic |
| AAAGAAAATGTGAGACTTTG+TGG | 0.382714 | 8.4:+13247865 | MS.gene036611:CDS |
| ACCGCAACCTAATTGCAAAA+TGG | 0.383315 | 8.4:+13248000 | MS.gene036611:CDS |
| GCAGAGTGCCCAAGGAGCTC+AGG | 0.388903 | 8.4:+13249366 | MS.gene036611:CDS |
| CAATTAATTCCCAGCCTTCT+GGG | 0.404207 | 8.4:-13247679 | None:intergenic |
| TATGAATTCTGTTTAGATCA+AGG | 0.408300 | 8.4:+13247969 | MS.gene036611:CDS |
| CCTACACTTCGTGAACTTCA+AGG | 0.446024 | 8.4:+13247704 | MS.gene036611:CDS |
| AGCCTTCTGGGTATTTAACT+CGG | 0.490950 | 8.4:-13247667 | None:intergenic |
| GAGTTAAATACCCAGAAGGC+TGG | 0.492946 | 8.4:+13247669 | MS.gene036611:CDS |
| CAAGGAGCTCAGGGAGGAGA+AGG | 0.494422 | 8.4:+13249376 | MS.gene036611:CDS |
| GTGTGTTCATTGTGGTTGCA+AGG | 0.509966 | 8.4:+13249406 | MS.gene036611:CDS |
| GTTGCAAGGGTTGTGCAAGT+GGG | 0.512248 | 8.4:+13249420 | MS.gene036611:CDS |
| GGTTGCAAGGGTTGTGCAAG+TGG | 0.514571 | 8.4:+13249419 | MS.gene036611:CDS |
| CAACATAGGCGTTCATAACC+AGG | 0.518122 | 8.4:-13249293 | None:intergenic |
| CCTAATTGCAAAATGGAAGA+AGG | 0.526082 | 8.4:+13248007 | MS.gene036611:CDS |
| GTATGCACCTCAAGCAACAT+AGG | 0.540597 | 8.4:-13249307 | None:intergenic |
| CCTTGAAGTTCACGAAGTGT+AGG | 0.544038 | 8.4:-13247704 | None:intergenic |
| CAGAGTGCCCAAGGAGCTCA+GGG | 0.552081 | 8.4:+13249367 | MS.gene036611:CDS |
| TGTGTTCATTGTGGTTGCAA+GGG | 0.552779 | 8.4:+13249407 | MS.gene036611:CDS |
| TTGCAAGGGTTGTGCAAGTG+GGG | 0.556074 | 8.4:+13249421 | MS.gene036611:CDS |
| TGAACTCTACCATAAGAGAA+AGG | 0.559158 | 8.4:+13247929 | MS.gene036611:CDS |
| AGTTAAATACCCAGAAGGCT+GGG | 0.561161 | 8.4:+13247670 | MS.gene036611:CDS |
| CTTCAAGGAAAGATGAGGGA+AGG | 0.566524 | 8.4:+13247719 | MS.gene036611:CDS |
| TTGTGTATGCAGAGTGCCCA+AGG | 0.571684 | 8.4:+13249358 | MS.gene036611:CDS |
| GTTATAGAGTGTGTTCATTG+TGG | 0.573951 | 8.4:+13249398 | MS.gene036611:CDS |
| GTGAACTTCAAGGAAAGATG+AGG | 0.592845 | 8.4:+13247714 | MS.gene036611:CDS |
| CACTCTGCATACACAAGTGG+TGG | 0.609114 | 8.4:-13249351 | None:intergenic |
| GCTGAGAATGACCCACATGA+TGG | 0.619377 | 8.4:+13247840 | MS.gene036611:intron |
| TGAACTTCAAGGAAAGATGA+GGG | 0.638807 | 8.4:+13247715 | MS.gene036611:CDS |
| ATGAACGCCTATGTTGCTTG+AGG | 0.642564 | 8.4:+13249300 | MS.gene036611:CDS |
| GGGCACTCTGCATACACAAG+TGG | 0.642607 | 8.4:-13249354 | None:intergenic |
| AGCCGAGTTAAATACCCAGA+AGG | 0.645736 | 8.4:+13247665 | MS.gene036611:CDS |
| GTGGCGAAATTGTGATCGCG+TGG | 0.685360 | 8.4:-13249332 | None:intergenic |
| AGTGCCCAAGGAGCTCAGGG+AGG | 0.692740 | 8.4:+13249370 | MS.gene036611:CDS |
| GGTAGAGTTCAAATACATAG+CGG | 0.738599 | 8.4:-13247917 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATATATATTCCTATA+TGG | - | chr8.4:13248873-13248892 | None:intergenic | 10.0% |
| !! | AAAACCATTTAAAAACCAAA+AGG | - | chr8.4:13248564-13248583 | None:intergenic | 20.0% |
| !! | ATATTGTTATATCCTTTATG+TGG | + | chr8.4:13247815-13247834 | MS.gene036611:intron | 20.0% |
| ! | AACAAGGTGATTAGAATTTA+AGG | - | chr8.4:13248279-13248298 | None:intergenic | 25.0% |
| ! | ACCGTTGAAAATGAAATATA+TGG | + | chr8.4:13249200-13249219 | MS.gene036611:intron | 25.0% |
| ! | ACTAAATCTACTCTTACAAT+TGG | + | chr8.4:13248994-13249013 | MS.gene036611:intron | 25.0% |
| ! | ATTAACTGAAGACAATGAAA+AGG | - | chr8.4:13249157-13249176 | None:intergenic | 25.0% |
| ! | CAAACAATTACTTTAGCAAA+GGG | - | chr8.4:13248907-13248926 | None:intergenic | 25.0% |
| ! | GAAAGTAAATTTCATTTGAC+GGG | + | chr8.4:13248082-13248101 | MS.gene036611:intron | 25.0% |
| ! | GAATGAAAAAGAATACAGTA+AGG | - | chr8.4:13247771-13247790 | None:intergenic | 25.0% |
| ! | GGAAAGTAAATTTCATTTGA+CGG | + | chr8.4:13248081-13248100 | MS.gene036611:intron | 25.0% |
| ! | TAGAAATTTCCTTTCTCTTA+TGG | - | chr8.4:13247941-13247960 | None:intergenic | 25.0% |
| ! | TATGAATTCTGTTTAGATCA+AGG | + | chr8.4:13247969-13247988 | MS.gene036611:CDS | 25.0% |
| ! | TATTCAATGAATGAACCAAA+TGG | + | chr8.4:13248778-13248797 | MS.gene036611:intron | 25.0% |
| ! | TCAAACAATTACTTTAGCAA+AGG | - | chr8.4:13248908-13248927 | None:intergenic | 25.0% |
| ! | TCATTCATTGAATATTCATC+TGG | - | chr8.4:13248772-13248791 | None:intergenic | 25.0% |
| ! | TTCAAGAGACATAATAAACT+CGG | + | chr8.4:13248643-13248662 | MS.gene036611:intron | 25.0% |
| ! | TTTAATAGTGAATGGTTGTT+TGG | + | chr8.4:13248827-13248846 | MS.gene036611:intron | 25.0% |
| !! | GCCATATATTTCATTTTCAA+CGG | - | chr8.4:13249204-13249223 | None:intergenic | 25.0% |
| !! | TAACATTCCTGTCATTTATA+CGG | - | chr8.4:13248438-13248457 | None:intergenic | 25.0% |
| !! | TCAACTTGTTTAATAGTGAA+TGG | + | chr8.4:13248819-13248838 | MS.gene036611:intron | 25.0% |
| !! | TGGTGTGCAATTTTAAATAT+AGG | - | chr8.4:13247891-13247910 | None:intergenic | 25.0% |
| !! | TTCACTATTAAACAAGTTGA+AGG | - | chr8.4:13248819-13248838 | None:intergenic | 25.0% |
| !!! | AGACAATATTTTTTTCCTAG+AGG | + | chr8.4:13249055-13249074 | MS.gene036611:intron | 25.0% |
| AAAGAAAATGTGAGACTTTG+TGG | + | chr8.4:13247865-13247884 | MS.gene036611:CDS | 30.0% | |
| AATGATCAAGTCCTTTACTT+TGG | - | chr8.4:13248535-13248554 | None:intergenic | 30.0% | |
| AGAAGTGAGAAATCTATATC+TGG | + | chr8.4:13248128-13248147 | MS.gene036611:intron | 30.0% | |
| CAATTTATTCTTGCACTATG+AGG | - | chr8.4:13248394-13248413 | None:intergenic | 30.0% | |
| GAAGTGAGAAATCTATATCT+GGG | + | chr8.4:13248129-13248148 | MS.gene036611:intron | 30.0% | |
| GTAAAGTAACCTTAAGCATA+TGG | + | chr8.4:13248203-13248222 | MS.gene036611:intron | 30.0% | |
| GTATAAATGACAGGAATGTT+AGG | + | chr8.4:13248437-13248456 | MS.gene036611:intron | 30.0% | |
| ! | ATTTTCTTTTGCCATCATGT+GGG | - | chr8.4:13247854-13247873 | None:intergenic | 30.0% |
| ! | GAACAATTTATTTGAGACCT+TGG | - | chr8.4:13248626-13248645 | None:intergenic | 30.0% |
| ! | TATGGTTTGTAGCAAAAACA+AGG | - | chr8.4:13248295-13248314 | None:intergenic | 30.0% |
| ! | TTGATCATTTAGTGACCTTT+TGG | + | chr8.4:13248546-13248565 | MS.gene036611:intron | 30.0% |
| !! | TTTGGTGTATGTCTTAGTTT+TGG | + | chr8.4:13248845-13248864 | MS.gene036611:intron | 30.0% |
| !!! | GTGACCTTTTGGTTTTTAAA+TGG | + | chr8.4:13248557-13248576 | MS.gene036611:intron | 30.0% |
| !!! | TTTTTTTCCTAGAGGTTACA+AGG | + | chr8.4:13249063-13249082 | MS.gene036611:intron | 30.0% |
| AGTGAACTACAATCAGCTTT+AGG | - | chr8.4:13248675-13248694 | None:intergenic | 35.0% | |
| CATCGTAGTTGCTATCTATA+AGG | + | chr8.4:13248950-13248969 | MS.gene036611:intron | 35.0% | |
| CCATAAAAAATTGCTCGAGA+AGG | + | chr8.4:13248310-13248329 | MS.gene036611:intron | 35.0% | |
| CCTAATTGCAAAATGGAAGA+AGG | + | chr8.4:13248007-13248026 | MS.gene036611:CDS | 35.0% | |
| GAGACATATCCATATGCTTA+AGG | - | chr8.4:13248215-13248234 | None:intergenic | 35.0% | |
| GAGATAGAATAAGTACGATC+AGG | + | chr8.4:13248104-13248123 | MS.gene036611:intron | 35.0% | |
| GAGTAAACTCTCCAAAGTAA+AGG | + | chr8.4:13248521-13248540 | MS.gene036611:intron | 35.0% | |
| GCAGTAAACAACAGTGATAT+TGG | - | chr8.4:13249135-13249154 | None:intergenic | 35.0% | |
| GGTAGAGTTCAAATACATAG+CGG | - | chr8.4:13247920-13247939 | None:intergenic | 35.0% | |
| GTTATAGAGTGTGTTCATTG+TGG | + | chr8.4:13249398-13249417 | MS.gene036611:CDS | 35.0% | |
| TAAAGCTGATTGTAGTTCAC+TGG | + | chr8.4:13248674-13248693 | MS.gene036611:intron | 35.0% | |
| TAAAGTTATGCCTGTGAGTA+AGG | + | chr8.4:13248598-13248617 | MS.gene036611:intron | 35.0% | |
| TGAACTCTACCATAAGAGAA+AGG | + | chr8.4:13247929-13247948 | MS.gene036611:CDS | 35.0% | |
| TGAACTTCAAGGAAAGATGA+GGG | + | chr8.4:13247715-13247734 | MS.gene036611:CDS | 35.0% | |
| ! | CATTTTCTTTTGCCATCATG+TGG | - | chr8.4:13247855-13247874 | None:intergenic | 35.0% |
| ! | CCTTCTTCCATTTTGCAATT+AGG | - | chr8.4:13248010-13248029 | None:intergenic | 35.0% |
| ! | GCTTAAGGTTACTTTACCTA+GGG | - | chr8.4:13248200-13248219 | None:intergenic | 35.0% |
| ! | TGCTTAAGGTTACTTTACCT+AGG | - | chr8.4:13248201-13248220 | None:intergenic | 35.0% |
| !! | TCCATTTTGCAATTAGGTTG+CGG | - | chr8.4:13248004-13248023 | None:intergenic | 35.0% |
| !!! | CCTTCTCGAGCAATTTTTTA+TGG | - | chr8.4:13248313-13248332 | None:intergenic | 35.0% |
| !!! | TCTTAGTTTTGGCTCCATAT+AGG | + | chr8.4:13248856-13248875 | MS.gene036611:intron | 35.0% |
| ACAACAACCTTGTAACCTCT+AGG | - | chr8.4:13249073-13249092 | None:intergenic | 40.0% | |
| ACCGCAACCTAATTGCAAAA+TGG | + | chr8.4:13248000-13248019 | MS.gene036611:CDS | 40.0% | |
| AGCCTTCTGGGTATTTAACT+CGG | - | chr8.4:13247670-13247689 | None:intergenic | 40.0% | |
| AGGAATGTTAGGAGAAATGG+TGG | + | chr8.4:13248448-13248467 | MS.gene036611:intron | 40.0% | |
| AGTAGGACTGCAAATGATAC+GGG | + | chr8.4:13248250-13248269 | MS.gene036611:intron | 40.0% | |
| AGTTAAATACCCAGAAGGCT+GGG | + | chr8.4:13247670-13247689 | MS.gene036611:CDS | 40.0% | |
| CAATTAATTCCCAGCCTTCT+GGG | - | chr8.4:13247682-13247701 | None:intergenic | 40.0% | |
| CAGTAGGACTGCAAATGATA+CGG | + | chr8.4:13248249-13248268 | MS.gene036611:intron | 40.0% | |
| CCTAAAAAGGTCATTTCGCA+GGG | + | chr8.4:13248359-13248378 | MS.gene036611:intron | 40.0% | |
| GACAGGAATGTTAGGAGAAA+TGG | + | chr8.4:13248445-13248464 | MS.gene036611:intron | 40.0% | |
| GCTAGATCCGTATAAATGAC+AGG | + | chr8.4:13248428-13248447 | MS.gene036611:intron | 40.0% | |
| GCTCTCTGATCATCCTAAAA+AGG | + | chr8.4:13248346-13248365 | MS.gene036611:intron | 40.0% | |
| GTGAACTTCAAGGAAAGATG+AGG | + | chr8.4:13247714-13247733 | MS.gene036611:CDS | 40.0% | |
| GTTACACTTTCCTACTCTTG+TGG | - | chr8.4:13248178-13248197 | None:intergenic | 40.0% | |
| TCAATTAATTCCCAGCCTTC+TGG | - | chr8.4:13247683-13247702 | None:intergenic | 40.0% | |
| TCCTAAAAAGGTCATTTCGC+AGG | + | chr8.4:13248358-13248377 | MS.gene036611:intron | 40.0% | |
| TGTGTTCATTGTGGTTGCAA+GGG | + | chr8.4:13249407-13249426 | MS.gene036611:CDS | 40.0% | |
| TTACCAAGATTCACGCCATT+TGG | - | chr8.4:13248796-13248815 | None:intergenic | 40.0% | |
| TTAGGAGAAATGGTGGTAGA+AGG | + | chr8.4:13248455-13248474 | MS.gene036611:intron | 40.0% | |
| ! | ACTCGGCTTGTCTTTACTTT+CGG | - | chr8.4:13247653-13247672 | None:intergenic | 40.0% |
| ! | CTGATTGTAGTTCACTGGTT+TGG | + | chr8.4:13248679-13248698 | MS.gene036611:intron | 40.0% |
| !! | TTTGTTTCTGAATTGCAGCC+TGG | + | chr8.4:13249275-13249294 | MS.gene036611:intron | 40.0% |
| ACACTTTCCTACTCTTGTGG+TGG | - | chr8.4:13248175-13248194 | None:intergenic | 45.0% | |
| AGCCGAGTTAAATACCCAGA+AGG | + | chr8.4:13247665-13247684 | MS.gene036611:CDS | 45.0% | |
| AGTCCTACTGTGTATGTGGT+AGG | - | chr8.4:13248239-13248258 | None:intergenic | 45.0% | |
| CAAATACATAGCGGCTCTTC+TGG | - | chr8.4:13247911-13247930 | None:intergenic | 45.0% | |
| CAACATAGGCGTTCATAACC+AGG | - | chr8.4:13249296-13249315 | None:intergenic | 45.0% | |
| CATTCTCAGCTGCCACATAA+AGG | - | chr8.4:13247830-13247849 | None:intergenic | 45.0% | |
| CCCACAGACAGAATTCTAAG+GGG | + | chr8.4:13248746-13248765 | MS.gene036611:intron | 45.0% | |
| CCCCTTAGAATTCTGTCTGT+GGG | - | chr8.4:13248749-13248768 | None:intergenic | 45.0% | |
| CCTACACTTCGTGAACTTCA+AGG | + | chr8.4:13247704-13247723 | MS.gene036611:CDS | 45.0% | |
| CCTACTCTTGTGGTGGTAAA+AGG | - | chr8.4:13248168-13248187 | None:intergenic | 45.0% | |
| CCTTGAAGTTCACGAAGTGT+AGG | - | chr8.4:13247707-13247726 | None:intergenic | 45.0% | |
| CTTCAAGGAAAGATGAGGGA+AGG | + | chr8.4:13247719-13247738 | MS.gene036611:CDS | 45.0% | |
| GAACCAAATGGCGTGAATCT+TGG | + | chr8.4:13248790-13248809 | MS.gene036611:intron | 45.0% | |
| GAGTTAAATACCCAGAAGGC+TGG | + | chr8.4:13247669-13247688 | MS.gene036611:CDS | 45.0% | |
| GCCCACAGACAGAATTCTAA+GGG | + | chr8.4:13248745-13248764 | MS.gene036611:intron | 45.0% | |
| GGATCTAGCTAACAAGCATC+AGG | - | chr8.4:13248417-13248436 | None:intergenic | 45.0% | |
| GTATGCACCTCAAGCAACAT+AGG | - | chr8.4:13249310-13249329 | None:intergenic | 45.0% | |
| GTGTGTTCATTGTGGTTGCA+AGG | + | chr8.4:13249406-13249425 | MS.gene036611:CDS | 45.0% | |
| TCTCCTACCACATACACAGT+AGG | + | chr8.4:13248233-13248252 | MS.gene036611:intron | 45.0% | |
| TGCCCACAGACAGAATTCTA+AGG | + | chr8.4:13248744-13248763 | MS.gene036611:intron | 45.0% | |
| TGGTGGTAAAAGGCAAGTGT+TGG | - | chr8.4:13248158-13248177 | None:intergenic | 45.0% | |
| TTCTGTCTGTGGGCAAATTG+TGG | - | chr8.4:13248739-13248758 | None:intergenic | 45.0% | |
| TTGCAGTCCTACTGTGTATG+TGG | - | chr8.4:13248243-13248262 | None:intergenic | 45.0% | |
| ! | ATGAACGCCTATGTTGCTTG+AGG | + | chr8.4:13249300-13249319 | MS.gene036611:CDS | 45.0% |
| ! | CCCTGCGAAATGACCTTTTT+AGG | - | chr8.4:13248362-13248381 | None:intergenic | 45.0% |
| ! | CCTTTTACCACCACAAGAGT+AGG | + | chr8.4:13248165-13248184 | MS.gene036611:intron | 45.0% |
| ! | GAGTAGGAAAGTGTAACCCT+AGG | + | chr8.4:13248181-13248200 | MS.gene036611:intron | 45.0% |
| !!! | TTATTTTGTTTTTTTTTTAT+AGG | + | chr8.4:13248060-13248079 | MS.gene036611:intron | 5.0% |
| CACTCTGCATACACAAGTGG+TGG | - | chr8.4:13249354-13249373 | None:intergenic | 50.0% | |
| GCCCCTTAGAATTCTGTCTG+TGG | - | chr8.4:13248750-13248769 | None:intergenic | 50.0% | |
| GCTGAGAATGACCCACATGA+TGG | + | chr8.4:13247840-13247859 | MS.gene036611:intron | 50.0% | |
| GTTGCAAGGGTTGTGCAAGT+GGG | + | chr8.4:13249420-13249439 | MS.gene036611:CDS | 50.0% | |
| TTGCAAGGGTTGTGCAAGTG+GGG | + | chr8.4:13249421-13249440 | MS.gene036611:CDS | 50.0% | |
| ! | TTGTGTATGCAGAGTGCCCA+AGG | + | chr8.4:13249358-13249377 | MS.gene036611:CDS | 50.0% |
| !! | TAGGATGATCAGAGAGCACC+AGG | - | chr8.4:13248343-13248362 | None:intergenic | 50.0% |
| GACCTTGGCTCCTTACTCAC+AGG | - | chr8.4:13248611-13248630 | None:intergenic | 55.0% | |
| GGGCACTCTGCATACACAAG+TGG | - | chr8.4:13249357-13249376 | None:intergenic | 55.0% | |
| GGTTGCAAGGGTTGTGCAAG+TGG | + | chr8.4:13249419-13249438 | MS.gene036611:CDS | 55.0% | |
| GTGGCGAAATTGTGATCGCG+TGG | - | chr8.4:13249335-13249354 | None:intergenic | 55.0% | |
| TGCCTGTGAGTAAGGAGCCA+AGG | + | chr8.4:13248606-13248625 | MS.gene036611:intron | 55.0% | |
| TTCTCCTCCCTGAGCTCCTT+GGG | - | chr8.4:13249377-13249396 | None:intergenic | 55.0% | |
| ! | GCTCGAGAAGGTATAGCACC+TGG | + | chr8.4:13248322-13248341 | MS.gene036611:intron | 55.0% |
| CAAGGAGCTCAGGGAGGAGA+AGG | + | chr8.4:13249376-13249395 | MS.gene036611:CDS | 60.0% | |
| CTTCTCCTCCCTGAGCTCCT+TGG | - | chr8.4:13249378-13249397 | None:intergenic | 60.0% | |
| ! | CAGAGTGCCCAAGGAGCTCA+GGG | + | chr8.4:13249367-13249386 | MS.gene036611:CDS | 60.0% |
| AGTGCCCAAGGAGCTCAGGG+AGG | + | chr8.4:13249370-13249389 | MS.gene036611:CDS | 65.0% | |
| ! | GCAGAGTGCCCAAGGAGCTC+AGG | + | chr8.4:13249366-13249385 | MS.gene036611:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 13247647 | 13249448 | 13247647 | ID=MS.gene036611 |
| chr8.4 | mRNA | 13247647 | 13249448 | 13247647 | ID=MS.gene036611.t1;Parent=MS.gene036611 |
| chr8.4 | exon | 13247647 | 13247740 | 13247647 | ID=MS.gene036611.t1.exon1;Parent=MS.gene036611.t1 |
| chr8.4 | CDS | 13247647 | 13247740 | 13247647 | ID=cds.MS.gene036611.t1;Parent=MS.gene036611.t1 |
| chr8.4 | exon | 13247841 | 13248028 | 13247841 | ID=MS.gene036611.t1.exon2;Parent=MS.gene036611.t1 |
| chr8.4 | CDS | 13247841 | 13248028 | 13247841 | ID=cds.MS.gene036611.t1;Parent=MS.gene036611.t1 |
| chr8.4 | exon | 13249293 | 13249448 | 13249293 | ID=MS.gene036611.t1.exon3;Parent=MS.gene036611.t1 |
| chr8.4 | CDS | 13249293 | 13249448 | 13249293 | ID=cds.MS.gene036611.t1;Parent=MS.gene036611.t1 |
| Gene Sequence |
| Protein sequence |
