Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037436.t1 | XP_013455158.1 | 98.8 | 495 | 6 | 0 | 1 | 495 | 1 | 495 | 2.00E-276 | 961.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037436.t1 | O80437 | 78.6 | 490 | 103 | 1 | 7 | 494 | 10 | 499 | 1.3e-226 | 786.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037436.t1 | A0A072UIH6 | 98.8 | 495 | 6 | 0 | 1 | 495 | 1 | 495 | 1.5e-276 | 961.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene056794 | MS.gene037436 | PPI |
| MS.gene019646 | MS.gene037436 | PPI |
| MS.gene84826 | MS.gene037436 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037436.t1 | MTR_4g415290 | 98.788 | 495 | 6 | 0 | 1 | 495 | 1 | 495 | 0.0 | 998 |
| MS.gene037436.t1 | MTR_7g067380 | 84.040 | 495 | 77 | 2 | 1 | 494 | 3 | 496 | 0.0 | 853 |
| MS.gene037436.t1 | MTR_8g030620 | 61.914 | 491 | 180 | 5 | 7 | 491 | 10 | 499 | 0.0 | 634 |
| MS.gene037436.t1 | MTR_1g040500 | 58.097 | 494 | 199 | 5 | 7 | 494 | 6 | 497 | 0.0 | 590 |
| MS.gene037436.t1 | MTR_5g080360 | 51.046 | 478 | 224 | 4 | 21 | 492 | 2 | 475 | 4.94e-164 | 473 |
| MS.gene037436.t1 | MTR_5g091660 | 50.305 | 491 | 228 | 7 | 7 | 491 | 51 | 531 | 1.87e-162 | 471 |
| MS.gene037436.t1 | MTR_3g448430 | 46.421 | 489 | 243 | 8 | 8 | 489 | 35 | 511 | 1.13e-149 | 437 |
| MS.gene037436.t1 | MTR_1g086650 | 43.333 | 480 | 255 | 8 | 17 | 489 | 60 | 529 | 5.16e-127 | 380 |
| MS.gene037436.t1 | MTR_5g061520 | 41.770 | 486 | 268 | 8 | 15 | 494 | 10 | 486 | 1.46e-120 | 362 |
| MS.gene037436.t1 | MTR_3g048330 | 52.837 | 282 | 120 | 3 | 220 | 493 | 1 | 277 | 1.27e-99 | 301 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037436.t1 | AT2G38110 | 79.794 | 485 | 96 | 1 | 7 | 489 | 10 | 494 | 0.0 | 791 |
| MS.gene037436.t1 | AT4G00400 | 61.475 | 488 | 182 | 5 | 7 | 491 | 10 | 494 | 0.0 | 606 |
| MS.gene037436.t1 | AT1G01610 | 60.772 | 492 | 186 | 6 | 7 | 494 | 10 | 498 | 0.0 | 595 |
| MS.gene037436.t1 | AT3G11430 | 50.932 | 483 | 215 | 4 | 19 | 489 | 9 | 481 | 1.17e-165 | 478 |
| MS.gene037436.t1 | AT5G06090 | 48.560 | 486 | 222 | 6 | 19 | 489 | 7 | 479 | 1.03e-152 | 445 |
| MS.gene037436.t1 | AT1G06520 | 44.574 | 516 | 250 | 11 | 5 | 490 | 76 | 585 | 2.18e-146 | 432 |
| MS.gene037436.t1 | AT1G02390 | 39.264 | 489 | 277 | 9 | 16 | 490 | 46 | 528 | 2.02e-110 | 338 |
| MS.gene037436.t1 | AT4G01950 | 39.148 | 493 | 270 | 11 | 17 | 492 | 41 | 520 | 8.11e-108 | 330 |
| MS.gene037436.t1 | AT4G01950 | 39.148 | 493 | 270 | 11 | 17 | 492 | 69 | 548 | 2.23e-107 | 330 |
| MS.gene037436.t1 | AT3G11325 | 49.237 | 262 | 100 | 1 | 228 | 489 | 144 | 372 | 1.07e-83 | 264 |
| MS.gene037436.t1 | AT3G11325 | 37.143 | 105 | 66 | 0 | 31 | 135 | 9 | 113 | 3.05e-16 | 80.9 |
| MS.gene037436.t1 | AT3G11325 | 49.237 | 262 | 100 | 1 | 228 | 489 | 141 | 369 | 1.47e-83 | 264 |
| MS.gene037436.t1 | AT3G11325 | 37.143 | 105 | 66 | 0 | 31 | 135 | 6 | 110 | 3.30e-16 | 80.9 |
Find 108 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATCCTTCCTTGTTAAAT+TGG | 0.158055 | 4.1:-80970624 | None:intergenic |
| GAGGCAGTTATGAAAGAATT+TGG | 0.160182 | 4.1:+80966307 | MS.gene037436:CDS |
| TTGCACTCTTAACCTTCTTA+TGG | 0.235930 | 4.1:+80969943 | MS.gene037436:CDS |
| TTTGTACTACATTTAGAAAT+TGG | 0.289581 | 4.1:-80965803 | None:intergenic |
| GAATCATACTTTCAATCTTA+AGG | 0.293063 | 4.1:+80969976 | MS.gene037436:CDS |
| GAGTAACAATTTGCCTGATT+TGG | 0.303564 | 4.1:+80966330 | MS.gene037436:CDS |
| AATTATATTCAAAGGGTTCT+TGG | 0.305203 | 4.1:+80970578 | MS.gene037436:CDS |
| AGAAGCTTGTTTCTTGGTAA+TGG | 0.311340 | 4.1:-80969867 | None:intergenic |
| GATAAGTATGCTATTCTTGC+AGG | 0.334585 | 4.1:+80970641 | MS.gene037436:CDS |
| GGGCTTAGAAGCTTGTTTCT+TGG | 0.336364 | 4.1:-80969873 | None:intergenic |
| TCTCTACATGTCGTTCCTTC+CGG | 0.339845 | 4.1:-80970323 | None:intergenic |
| TTTCTTGAATCAGTTGCCTT+TGG | 0.341998 | 4.1:+80970514 | MS.gene037436:CDS |
| AGTAACAATTTGCCTGATTT+GGG | 0.342680 | 4.1:+80966331 | MS.gene037436:CDS |
| AATCATACTTTCAATCTTAA+GGG | 0.343266 | 4.1:+80969977 | MS.gene037436:CDS |
| AGGGTTCTTGGAGGGACTCT+TGG | 0.352717 | 4.1:+80970590 | MS.gene037436:CDS |
| GGATTCATGAACACAAAATA+AGG | 0.356896 | 4.1:-80970470 | None:intergenic |
| CCAAGGTCTCGGAGACAAAT+AGG | 0.357156 | 4.1:-80965982 | None:intergenic |
| GAAGCTTGTTTCTTGGTAAT+GGG | 0.362820 | 4.1:-80969866 | None:intergenic |
| AGGCAGTTATGAAAGAATTT+GGG | 0.373459 | 4.1:+80966308 | MS.gene037436:CDS |
| TCTTGGTAATGGGTCACATT+TGG | 0.374038 | 4.1:-80969856 | None:intergenic |
| TGGAAGGTGTTCAATTCGTT+CGG | 0.374308 | 4.1:+80966118 | MS.gene037436:CDS |
| GTTGTTACAGGAGTTGCATT+AGG | 0.394796 | 4.1:+80970155 | MS.gene037436:CDS |
| TAAAAGCCGTTGCGCTTTCA+AGG | 0.395510 | 4.1:+80970237 | MS.gene037436:CDS |
| CTGGATCTAAAACTGTTCTA+TGG | 0.403705 | 4.1:-80970133 | None:intergenic |
| GAGGGCAAGTGGGTTTGTTA+AGG | 0.407100 | 4.1:+80966252 | MS.gene037436:CDS |
| TGGTACAATTATAAATTACT+TGG | 0.415906 | 4.1:+80970035 | MS.gene037436:CDS |
| ACCTTCTTATGGATGCCAAT+TGG | 0.419088 | 4.1:+80969954 | MS.gene037436:CDS |
| TTGAACACCTTCCATGTCTC+TGG | 0.423670 | 4.1:-80966109 | None:intergenic |
| TTAGAAATTGGTGGGAAAAG+TGG | 0.430405 | 4.1:-80965791 | None:intergenic |
| AATGCAACTCCTGTAACAAC+TGG | 0.433295 | 4.1:-80970152 | None:intergenic |
| AGTGCGATGAGCATGTAGTA+TGG | 0.434214 | 4.1:-80965893 | None:intergenic |
| GGAAGGTGTTCAATTCGTTC+GGG | 0.434242 | 4.1:+80966119 | MS.gene037436:CDS |
| CACGGCTAGTCCAAGGTTGA+TGG | 0.435779 | 4.1:+80966156 | MS.gene037436:CDS |
| AATGGGTCACATTTGGTCCT+TGG | 0.442068 | 4.1:-80969849 | None:intergenic |
| ATTGAAAGTATGATTCCAAT+TGG | 0.443499 | 4.1:-80969969 | None:intergenic |
| CTGTCTCCCAGTCCCAAATC+AGG | 0.448486 | 4.1:-80966343 | None:intergenic |
| CAATTTGCCTGATTTGGGAC+TGG | 0.449611 | 4.1:+80966336 | MS.gene037436:CDS |
| AAGAGTGCAAATAGAGGGGT+TGG | 0.455638 | 4.1:-80969930 | None:intergenic |
| GTAGAGAACCGTTTCTATTG+AGG | 0.458187 | 4.1:+80970339 | MS.gene037436:CDS |
| TCCAATTGGCATCCATAAGA+AGG | 0.458669 | 4.1:-80969955 | None:intergenic |
| ATGCTCATCGCACTTGAAGC+TGG | 0.461452 | 4.1:+80965902 | MS.gene037436:CDS |
| GGTGCTAGGGACTGAATTGA+TGG | 0.464183 | 4.1:+80966216 | MS.gene037436:CDS |
| AATTTGCCTGATTTGGGACT+GGG | 0.468437 | 4.1:+80966337 | MS.gene037436:CDS |
| AAGGAACCAGGAGTTCTTGT+TGG | 0.472018 | 4.1:+80966271 | MS.gene037436:CDS |
| TGCTTCGTATTAATCGCGAC+AGG | 0.478003 | 4.1:-80970401 | None:intergenic |
| TTTCTCGGTCAGTGTTGCCT+AGG | 0.478351 | 4.1:+80966065 | MS.gene037436:CDS |
| TTGTCACATTCGCGGGGCTA+AGG | 0.481220 | 4.1:+80966023 | MS.gene037436:CDS |
| TACTACATTTAGAAATTGGT+GGG | 0.484182 | 4.1:-80965799 | None:intergenic |
| TTGGGAGTAGATAAGGTGCT+AGG | 0.486623 | 4.1:+80966202 | MS.gene037436:CDS |
| CCTTTGGAATTGACTTGCAG+TGG | 0.493619 | 4.1:+80970530 | MS.gene037436:CDS |
| TTAATCTTTGTCACATTCGC+GGG | 0.496943 | 4.1:+80966016 | MS.gene037436:CDS |
| CTAAGTCGGATGCCACGGTC+TGG | 0.497532 | 4.1:-80965838 | None:intergenic |
| ATAAAGAAATTGCTTGAAGA+AGG | 0.497977 | 4.1:+80970284 | MS.gene037436:CDS |
| GGCTCGCGGACACAAATTGT+TGG | 0.498712 | 4.1:+80970445 | MS.gene037436:CDS |
| GAAATATATGAAAGGGACTA+AGG | 0.501854 | 4.1:-80965954 | None:intergenic |
| CACATTACAGGAAGGATACA+TGG | 0.503595 | 4.1:+80969824 | MS.gene037436:intron |
| AGTTGCAAATTATATTCAAA+GGG | 0.504087 | 4.1:+80970571 | MS.gene037436:CDS |
| AAGTTGCAAATTATATTCAA+AGG | 0.504845 | 4.1:+80970570 | MS.gene037436:CDS |
| TGTTCACCAACAAGAACTCC+TGG | 0.509031 | 4.1:-80966277 | None:intergenic |
| AAGAAAGTGATCTCATAAGT+TGG | 0.509395 | 4.1:-80970497 | None:intergenic |
| GCTATTCTTGCAGGAACAGA+TGG | 0.510039 | 4.1:+80970650 | MS.gene037436:CDS |
| GGAATAAGAGTAATTAGAAA+AGG | 0.510705 | 4.1:+80970056 | MS.gene037436:CDS |
| CCTATTTGTCTCCGAGACCT+TGG | 0.512360 | 4.1:+80965982 | MS.gene037436:CDS |
| AGGTTAAGAGTGCAAATAGA+GGG | 0.520148 | 4.1:-80969935 | None:intergenic |
| AGGTGACTTAGTGATTTGTC+CGG | 0.526292 | 4.1:+80970304 | MS.gene037436:CDS |
| GGTACGTGAAATATATGAAA+GGG | 0.527101 | 4.1:-80965961 | None:intergenic |
| GAGACGTGGAGATTGTTTCT+CGG | 0.527308 | 4.1:+80966050 | MS.gene037436:CDS |
| AAGGTTAAGAGTGCAAATAG+AGG | 0.530421 | 4.1:-80969936 | None:intergenic |
| TGACTTCATGTCTATTTGCA+AGG | 0.539001 | 4.1:+80966378 | MS.gene037436:CDS |
| GCCGTCTAAGTCGGATGCCA+CGG | 0.541253 | 4.1:-80965843 | None:intergenic |
| GCACTAAACCTCAATAGAAA+CGG | 0.544972 | 4.1:-80970347 | None:intergenic |
| ATATTCAAAGGGTTCTTGGA+GGG | 0.546066 | 4.1:+80970582 | MS.gene037436:CDS |
| ATGCACTTCGCGACACGAGA+AGG | 0.548044 | 4.1:-80965868 | None:intergenic |
| TGTTGGTGAACACAAGAAAG+AGG | 0.548662 | 4.1:+80966288 | MS.gene037436:CDS |
| TGGGAGTAGATAAGGTGCTA+GGG | 0.549005 | 4.1:+80966203 | MS.gene037436:CDS |
| AGTGGGTTTGTTAAGGAACC+AGG | 0.551989 | 4.1:+80966259 | MS.gene037436:CDS |
| AATGGCTCAACCATCAACCT+TGG | 0.553342 | 4.1:-80966166 | None:intergenic |
| TGTCTCTGGATGCACGTCCT+CGG | 0.553696 | 4.1:-80966095 | None:intergenic |
| ATGTACCAATTTAACAAGGA+AGG | 0.557734 | 4.1:+80970619 | MS.gene037436:CDS |
| GTACTACATTTAGAAATTGG+TGG | 0.557810 | 4.1:-80965800 | None:intergenic |
| TATATTCAAAGGGTTCTTGG+AGG | 0.558009 | 4.1:+80970581 | MS.gene037436:CDS |
| AAAAGCCGTTGCGCTTTCAA+GGG | 0.561930 | 4.1:+80970238 | MS.gene037436:CDS |
| TGGAATTGACTTGCAGTGGA+GGG | 0.564415 | 4.1:+80970534 | MS.gene037436:CDS |
| AGGTACGTGAAATATATGAA+AGG | 0.567264 | 4.1:-80965962 | None:intergenic |
| TTGGAATTGACTTGCAGTGG+AGG | 0.574024 | 4.1:+80970533 | MS.gene037436:CDS |
| ATTAATCTTTGTCACATTCG+CGG | 0.578687 | 4.1:+80966015 | MS.gene037436:CDS |
| GAGAAGGGTGCCGTCTAAGT+CGG | 0.579695 | 4.1:-80965852 | None:intergenic |
| GTGATCTCATAAGTTGGCAT+AGG | 0.582217 | 4.1:-80970491 | None:intergenic |
| GGTTAAGAGTGCAAATAGAG+GGG | 0.592460 | 4.1:-80969934 | None:intergenic |
| TGCACTTCGCGACACGAGAA+GGG | 0.596300 | 4.1:-80965867 | None:intergenic |
| AGGACGTGCATCCAGAGACA+TGG | 0.604083 | 4.1:+80966098 | MS.gene037436:CDS |
| TCTTTCCCTTGAAAGCGCAA+CGG | 0.605263 | 4.1:-80970243 | None:intergenic |
| ACATTGTCACGGCTAGTCCA+AGG | 0.617998 | 4.1:+80966149 | MS.gene037436:CDS |
| GTTGCCTAGGTTCTATGCCG+AGG | 0.628644 | 4.1:+80966078 | MS.gene037436:CDS |
| GCTTCGTATTAATCGCGACA+GGG | 0.633339 | 4.1:-80970400 | None:intergenic |
| CCACTGCAAGTCAATTCCAA+AGG | 0.642771 | 4.1:-80970530 | None:intergenic |
| ACCGTGGCATCCGACTTAGA+CGG | 0.650375 | 4.1:+80965842 | MS.gene037436:CDS |
| GACTTAGTGATTTGTCCGGA+AGG | 0.655073 | 4.1:+80970308 | MS.gene037436:CDS |
| ACGTCCTCGGCATAGAACCT+AGG | 0.656526 | 4.1:-80966082 | None:intergenic |
| TTGAATGTACCAATTTAACA+AGG | 0.660163 | 4.1:+80970615 | MS.gene037436:CDS |
| AATTGGTGGGAAAAGTGGAA+AGG | 0.662471 | 4.1:-80965786 | None:intergenic |
| TAATCTTTGTCACATTCGCG+GGG | 0.673980 | 4.1:+80966017 | MS.gene037436:CDS |
| AGATAGATCAAACCAGACCG+TGG | 0.682527 | 4.1:+80965826 | MS.gene037436:CDS |
| AGGAAGGATACATGGTACCA+AGG | 0.684832 | 4.1:+80969832 | MS.gene037436:intron |
| CGGGAAACGATACATTGTCA+CGG | 0.691995 | 4.1:+80966138 | MS.gene037436:CDS |
| CGTGCATCCAGAGACATGGA+AGG | 0.693169 | 4.1:+80966102 | MS.gene037436:CDS |
| GGGGCTAAGGATAAGAGACG+TGG | 0.717767 | 4.1:+80966036 | MS.gene037436:CDS |
| AAGGGAAAGAGATAGAGATG+CGG | 0.731861 | 4.1:+80970256 | MS.gene037436:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAAATACATAGTT+AGG | - | chr4.1:80969311-80969330 | None:intergenic | 10.0% |
| !! | TGATGATTATTAAATTATAT+CGG | + | chr4.1:80967813-80967832 | MS.gene037436:intron | 10.0% |
| !!! | AAAAAAAGTGATTTTTATTA+CGG | - | chr4.1:80968996-80969015 | None:intergenic | 10.0% |
| !!! | AAAAAATAGATTTTTTTTAG+AGG | - | chr4.1:80969112-80969131 | None:intergenic | 10.0% |
| !!! | ATGAATGTTTTATTAATTAA+TGG | + | chr4.1:80966602-80966621 | MS.gene037436:intron | 10.0% |
| !!! | CTTTTCAAAAAAAAATATAT+TGG | + | chr4.1:80966755-80966774 | MS.gene037436:intron | 10.0% |
| !! | AACTAACACATTATATAATT+TGG | - | chr4.1:80966477-80966496 | None:intergenic | 15.0% |
| !! | ATAACAAAAATATACATGAA+TGG | - | chr4.1:80966860-80966879 | None:intergenic | 15.0% |
| !! | CAAAAACATGATAAATAAAT+AGG | - | chr4.1:80966834-80966853 | None:intergenic | 15.0% |
| !! | TAAAATTGAGAAATCAAAAT+AGG | - | chr4.1:80967540-80967559 | None:intergenic | 15.0% |
| !! | TAATAGACTATAATTTAGAA+TGG | + | chr4.1:80966680-80966699 | MS.gene037436:intron | 15.0% |
| !! | TTTGATTAATCAAAATCTAA+TGG | + | chr4.1:80966940-80966959 | MS.gene037436:intron | 15.0% |
| !!! | ATTTTCATACATTTTTTATG+TGG | - | chr4.1:80968578-80968597 | None:intergenic | 15.0% |
| !!! | GATTTTTTTTTTTCTTCTAA+TGG | + | chr4.1:80969549-80969568 | MS.gene037436:intron | 15.0% |
| !!! | TTATATAATGTGTTAGTTTA+TGG | + | chr4.1:80966479-80966498 | MS.gene037436:intron | 15.0% |
| !!! | TTTTTTTTTCAATCTAACTT+AGG | + | chr4.1:80967360-80967379 | MS.gene037436:intron | 15.0% |
| !! | AAACTCATAAAGTTATCATA+GGG | + | chr4.1:80968865-80968884 | MS.gene037436:intron | 20.0% |
| !! | AAATAAAATTTAGGAAGTCT+AGG | - | chr4.1:80968644-80968663 | None:intergenic | 20.0% |
| !! | AACAAGGACAAATAAAATTT+AGG | - | chr4.1:80968653-80968672 | None:intergenic | 20.0% |
| !! | AAGTTGCAAATTATATTCAA+AGG | + | chr4.1:80970570-80970589 | MS.gene037436:CDS | 20.0% |
| !! | AATAAAATTTAGGAAGTCTA+GGG | - | chr4.1:80968643-80968662 | None:intergenic | 20.0% |
| !! | AATCATACTTTCAATCTTAA+GGG | + | chr4.1:80969977-80969996 | MS.gene037436:CDS | 20.0% |
| !! | AGAAAAGAAAAAAAAGAACA+AGG | - | chr4.1:80968669-80968688 | None:intergenic | 20.0% |
| !! | AGAAATAATTAGACTATGTT+TGG | - | chr4.1:80969804-80969823 | None:intergenic | 20.0% |
| !! | AGTTGCAAATTATATTCAAA+GGG | + | chr4.1:80970571-80970590 | MS.gene037436:CDS | 20.0% |
| !! | TCACAACTAAAAAATTATAC+TGG | - | chr4.1:80967152-80967171 | None:intergenic | 20.0% |
| !! | TGGTACAATTATAAATTACT+TGG | + | chr4.1:80970035-80970054 | MS.gene037436:CDS | 20.0% |
| !! | TTGGATACAACAATTTAAAA+GGG | + | chr4.1:80969037-80969056 | MS.gene037436:intron | 20.0% |
| !! | TTTCTTCTTCTGTATATTAT+TGG | - | chr4.1:80968229-80968248 | None:intergenic | 20.0% |
| !! | TTTGGATACAACAATTTAAA+AGG | + | chr4.1:80969036-80969055 | MS.gene037436:intron | 20.0% |
| !! | TTTGTACTACATTTAGAAAT+TGG | - | chr4.1:80965806-80965825 | None:intergenic | 20.0% |
| !!! | AACTTTAGAGAACAAAAAAA+TGG | - | chr4.1:80968038-80968057 | None:intergenic | 20.0% |
| !!! | AAGTTTTAGGTGAAAAAAAT+AGG | - | chr4.1:80967421-80967440 | None:intergenic | 20.0% |
| !!! | GATGTTTTTTTTTTTTGAAG+AGG | - | chr4.1:80968379-80968398 | None:intergenic | 20.0% |
| !!! | TACAAATAATCTAGTTTGTT+TGG | + | chr4.1:80969018-80969037 | MS.gene037436:intron | 20.0% |
| !!! | TATAAAGCATCAATAAAGTT+AGG | - | chr4.1:80968066-80968085 | None:intergenic | 20.0% |
| !!! | TCTTTTTCAAATTTCTGTTT+TGG | + | chr4.1:80967721-80967740 | MS.gene037436:intron | 20.0% |
| !!! | TTATTTTAATCCGTAACAAA+CGG | - | chr4.1:80968892-80968911 | None:intergenic | 20.0% |
| !!! | TTTTAAAAAGCTGTAACAAA+CGG | + | chr4.1:80969196-80969215 | MS.gene037436:intron | 20.0% |
| !!! | TTTTAGTTGTGACAAATTAA+GGG | + | chr4.1:80967160-80967179 | MS.gene037436:intron | 20.0% |
| !!! | TTTTATAGGCGAAATTATTT+CGG | - | chr4.1:80970222-80970241 | None:intergenic | 20.0% |
| !!! | TTTTTAGTTGTGACAAATTA+AGG | + | chr4.1:80967159-80967178 | MS.gene037436:intron | 20.0% |
| !!! | TTTTTGTAGATGTGATATTA+GGG | + | chr4.1:80967483-80967502 | MS.gene037436:intron | 20.0% |
| !!! | TTTTTTTTTTTGAAGAGGAT+TGG | - | chr4.1:80968374-80968393 | None:intergenic | 20.0% |
| ! | AAATTATCAGTTCATAGACT+AGG | - | chr4.1:80969353-80969372 | None:intergenic | 25.0% |
| ! | AAGTTATCCTAAAAAGCTTA+TGG | - | chr4.1:80969655-80969674 | None:intergenic | 25.0% |
| ! | AATAAATAGGCAGATAGATA+TGG | - | chr4.1:80966821-80966840 | None:intergenic | 25.0% |
| ! | AATTATATTCAAAGGGTTCT+TGG | + | chr4.1:80970578-80970597 | MS.gene037436:CDS | 25.0% |
| ! | AATTGGAAGATATCCAATTA+GGG | - | chr4.1:80968257-80968276 | None:intergenic | 25.0% |
| ! | AGAAGAAAAAAATCCCTAAT+TGG | + | chr4.1:80968241-80968260 | MS.gene037436:intron | 25.0% |
| ! | AGACATAAATTTAAGGAAAG+AGG | - | chr4.1:80967903-80967922 | None:intergenic | 25.0% |
| ! | ATAAAATTTAGGAAGTCTAG+GGG | - | chr4.1:80968642-80968661 | None:intergenic | 25.0% |
| ! | ATAAAGAAATTGCTTGAAGA+AGG | + | chr4.1:80970284-80970303 | MS.gene037436:CDS | 25.0% |
| ! | ATGTGATATTAGGGATTTAA+AGG | + | chr4.1:80967492-80967511 | MS.gene037436:intron | 25.0% |
| ! | ATTAAATTGACTACAGAAAC+TGG | - | chr4.1:80966781-80966800 | None:intergenic | 25.0% |
| ! | ATTGAGAAATCAAAATAGGA+AGG | - | chr4.1:80967536-80967555 | None:intergenic | 25.0% |
| ! | CAAACTCATAAAGTTATCAT+AGG | + | chr4.1:80968864-80968883 | MS.gene037436:intron | 25.0% |
| ! | CAACTAAAAAATTATACTGG+AGG | - | chr4.1:80967149-80967168 | None:intergenic | 25.0% |
| ! | CAATTGTAAAATCAGTTCTA+GGG | + | chr4.1:80968272-80968291 | MS.gene037436:intron | 25.0% |
| ! | CAGATAGATATGGATATATT+AGG | - | chr4.1:80966811-80966830 | None:intergenic | 25.0% |
| ! | CGAAAACAGACATAAATTTA+AGG | - | chr4.1:80967910-80967929 | None:intergenic | 25.0% |
| ! | CTATGATAACTTTATGAGTT+TGG | - | chr4.1:80968866-80968885 | None:intergenic | 25.0% |
| ! | CTTAAAAAAGCTGTAACAAA+CGG | + | chr4.1:80969268-80969287 | MS.gene037436:intron | 25.0% |
| ! | GAATCATACTTTCAATCTTA+AGG | + | chr4.1:80969976-80969995 | MS.gene037436:CDS | 25.0% |
| ! | GGAATAAGAGTAATTAGAAA+AGG | + | chr4.1:80970056-80970075 | MS.gene037436:CDS | 25.0% |
| ! | GGATATAGAGATGTTAAAAT+GGG | - | chr4.1:80968353-80968372 | None:intergenic | 25.0% |
| ! | TAAAGATAGAAAAAGACAGA+TGG | - | chr4.1:80967980-80967999 | None:intergenic | 25.0% |
| ! | TACCCTCATGAAAAATAATT+GGG | - | chr4.1:80969896-80969915 | None:intergenic | 25.0% |
| ! | TACTACATTTAGAAATTGGT+GGG | - | chr4.1:80965802-80965821 | None:intergenic | 25.0% |
| ! | TGGATATAGAGATGTTAAAA+TGG | - | chr4.1:80968354-80968373 | None:intergenic | 25.0% |
| ! | TGTGATATTAGGGATTTAAA+GGG | + | chr4.1:80967493-80967512 | MS.gene037436:intron | 25.0% |
| ! | TTAAAAAAGCTGTAACAAAC+GGG | + | chr4.1:80969269-80969288 | MS.gene037436:intron | 25.0% |
| ! | TTGAATGTACCAATTTAACA+AGG | + | chr4.1:80970615-80970634 | MS.gene037436:CDS | 25.0% |
| ! | TTTAGTTGTGACAAATTAAG+GGG | + | chr4.1:80967161-80967180 | MS.gene037436:intron | 25.0% |
| !! | AATTATACTGGAGGATATTT+TGG | - | chr4.1:80967140-80967159 | None:intergenic | 25.0% |
| !! | AATTGATGGTTACAAAAACA+GGG | + | chr4.1:80966230-80966249 | MS.gene037436:CDS | 25.0% |
| !! | AGACTATAATTTAGAATGGA+TGG | + | chr4.1:80966684-80966703 | MS.gene037436:intron | 25.0% |
| !! | AGTCATATTTCACAAGTTTT+AGG | - | chr4.1:80967434-80967453 | None:intergenic | 25.0% |
| !! | ATTGAAAGTATGATTCCAAT+TGG | - | chr4.1:80969972-80969991 | None:intergenic | 25.0% |
| !! | ATTTGTGAATGTCGATTAAA+AGG | - | chr4.1:80966533-80966552 | None:intergenic | 25.0% |
| !! | CATTTTATCATACTGTCATA+TGG | - | chr4.1:80968812-80968831 | None:intergenic | 25.0% |
| !! | CTAATTATTTCTCACATTAC+AGG | + | chr4.1:80969812-80969831 | MS.gene037436:intron | 25.0% |
| !! | CTTATTTCCATAAGCTTTTT+AGG | + | chr4.1:80969645-80969664 | MS.gene037436:intron | 25.0% |
| !! | GTTTTCGTGTATAATTTTTC+CGG | + | chr4.1:80967923-80967942 | MS.gene037436:intron | 25.0% |
| !! | GTTTTTGTAGATGTGATATT+AGG | + | chr4.1:80967482-80967501 | MS.gene037436:intron | 25.0% |
| !!! | AAGCAATTTTTTCAGGTAAA+GGG | - | chr4.1:80970016-80970035 | None:intergenic | 25.0% |
| !!! | AAGTCTTTTAGTTGAACTTA+TGG | + | chr4.1:80969587-80969606 | MS.gene037436:intron | 25.0% |
| !!! | AAGTTTGTTTTATGGAACAT+CGG | + | chr4.1:80970424-80970443 | MS.gene037436:CDS | 25.0% |
| !!! | AATTGACTAGTATTTTAGCT+TGG | - | chr4.1:80968304-80968323 | None:intergenic | 25.0% |
| !!! | ATTGACTAGTATTTTAGCTT+GGG | - | chr4.1:80968303-80968322 | None:intergenic | 25.0% |
| !!! | CCATTTGTTAAGACATTTTT+GGG | + | chr4.1:80966184-80966203 | MS.gene037436:CDS | 25.0% |
| !!! | TTCAAATTTCTGTTTTGGAT+GGG | + | chr4.1:80967726-80967745 | MS.gene037436:intron | 25.0% |
| !!! | TTTCAAATTTCTGTTTTGGA+TGG | + | chr4.1:80967725-80967744 | MS.gene037436:intron | 25.0% |
| AAGAAAGTGATCTCATAAGT+TGG | - | chr4.1:80970500-80970519 | None:intergenic | 30.0% | |
| ACCCAACATCAAAAAATTAG+GGG | - | chr4.1:80967839-80967858 | None:intergenic | 30.0% | |
| AGGCAGTTATGAAAGAATTT+GGG | + | chr4.1:80966308-80966327 | MS.gene037436:CDS | 30.0% | |
| AGGTACGTGAAATATATGAA+AGG | - | chr4.1:80965965-80965984 | None:intergenic | 30.0% | |
| AGTAACAATTTGCCTGATTT+GGG | + | chr4.1:80966331-80966350 | MS.gene037436:CDS | 30.0% | |
| ATGAACTGATAATTTCCACA+TGG | + | chr4.1:80969358-80969377 | MS.gene037436:intron | 30.0% | |
| ATGTACCAATTTAACAAGGA+AGG | + | chr4.1:80970619-80970638 | MS.gene037436:CDS | 30.0% | |
| ATTAATCTTTGTCACATTCG+CGG | + | chr4.1:80966015-80966034 | MS.gene037436:CDS | 30.0% | |
| CAATAAACACGATACTGATA+TGG | + | chr4.1:80968118-80968137 | MS.gene037436:intron | 30.0% | |
| CAATTGGAAGATATCCAATT+AGG | - | chr4.1:80968258-80968277 | None:intergenic | 30.0% | |
| CACCCAACATCAAAAAATTA+GGG | - | chr4.1:80967840-80967859 | None:intergenic | 30.0% | |
| CATAAATTTAAGGAAAGAGG+AGG | - | chr4.1:80967900-80967919 | None:intergenic | 30.0% | |
| CCAATTGTAAAATCAGTTCT+AGG | + | chr4.1:80968271-80968290 | MS.gene037436:intron | 30.0% | |
| CCCAAAAATGTCTTAACAAA+TGG | - | chr4.1:80966187-80966206 | None:intergenic | 30.0% | |
| CTACCCTCATGAAAAATAAT+TGG | - | chr4.1:80969897-80969916 | None:intergenic | 30.0% | |
| CTTATCCTTCCTTGTTAAAT+TGG | - | chr4.1:80970627-80970646 | None:intergenic | 30.0% | |
| CTTTACCTGAAAAAATTGCT+TGG | + | chr4.1:80970015-80970034 | MS.gene037436:CDS | 30.0% | |
| GAAATATATGAAAGGGACTA+AGG | - | chr4.1:80965957-80965976 | None:intergenic | 30.0% | |
| GGATTCATGAACACAAAATA+AGG | - | chr4.1:80970473-80970492 | None:intergenic | 30.0% | |
| GGTACGTGAAATATATGAAA+GGG | - | chr4.1:80965964-80965983 | None:intergenic | 30.0% | |
| GTACTACATTTAGAAATTGG+TGG | - | chr4.1:80965803-80965822 | None:intergenic | 30.0% | |
| GTCTGTTTGAGAGTTTAAAA+GGG | - | chr4.1:80967286-80967305 | None:intergenic | 30.0% | |
| TCACCCAACATCAAAAAATT+AGG | - | chr4.1:80967841-80967860 | None:intergenic | 30.0% | |
| TCTGTTTGAGAGTTTAAAAG+GGG | - | chr4.1:80967285-80967304 | None:intergenic | 30.0% | |
| TTAGTTGTGACAAATTAAGG+GGG | + | chr4.1:80967162-80967181 | MS.gene037436:intron | 30.0% | |
| TTCTAGATATCACAGATTCA+GGG | + | chr4.1:80968685-80968704 | MS.gene037436:intron | 30.0% | |
| TTTCTAGATATCACAGATTC+AGG | + | chr4.1:80968684-80968703 | MS.gene037436:intron | 30.0% | |
| ! | AGAAAACCTTAACTGTTTTG+TGG | - | chr4.1:80969411-80969430 | None:intergenic | 30.0% |
| ! | ATGGTTATCATGTATCGTTT+TGG | + | chr4.1:80966959-80966978 | MS.gene037436:intron | 30.0% |
| ! | CAAAACAGTTAAGGTTTTCT+AGG | + | chr4.1:80969411-80969430 | MS.gene037436:intron | 30.0% |
| ! | GAAAACCTTAACTGTTTTGT+GGG | - | chr4.1:80969410-80969429 | None:intergenic | 30.0% |
| ! | GAATTGATGGTTACAAAAAC+AGG | + | chr4.1:80966229-80966248 | MS.gene037436:CDS | 30.0% |
| ! | TGCTCTTTTTGCAGAATTAA+CGG | + | chr4.1:80970367-80970386 | MS.gene037436:CDS | 30.0% |
| ! | TGGTTATCATGTATCGTTTT+GGG | + | chr4.1:80966960-80966979 | MS.gene037436:intron | 30.0% |
| ! | TTATTTCTCACATTACAGGA+AGG | + | chr4.1:80969816-80969835 | MS.gene037436:intron | 30.0% |
| !! | AAGCCCAATTATTTTTCATG+AGG | + | chr4.1:80969890-80969909 | MS.gene037436:CDS | 30.0% |
| !! | AGCCCAATTATTTTTCATGA+GGG | + | chr4.1:80969891-80969910 | MS.gene037436:CDS | 30.0% |
| !! | ATTAAGGGGGTTTTATATCT+TGG | + | chr4.1:80967175-80967194 | MS.gene037436:intron | 30.0% |
| !! | ATTGAGTTGAGTTGGATTAT+AGG | + | chr4.1:80968321-80968340 | MS.gene037436:intron | 30.0% |
| !! | CCTAGAACTGATTTTACAAT+TGG | - | chr4.1:80968274-80968293 | None:intergenic | 30.0% |
| !! | GCCATTTGTTAAGACATTTT+TGG | + | chr4.1:80966183-80966202 | MS.gene037436:CDS | 30.0% |
| !! | TTGAGTTGAGTTGGATTATA+GGG | + | chr4.1:80968322-80968341 | MS.gene037436:intron | 30.0% |
| !! | TTTTTGCAGAATTAACGGAT+AGG | + | chr4.1:80970372-80970391 | MS.gene037436:CDS | 30.0% |
| !!! | ACGAAGCAAAGTTTGTTTTA+TGG | + | chr4.1:80970416-80970435 | MS.gene037436:CDS | 30.0% |
| !!! | CAAGCAATTTTTTCAGGTAA+AGG | - | chr4.1:80970017-80970036 | None:intergenic | 30.0% |
| !!! | CGTTTGTTACAGCTTTTTTA+AGG | - | chr4.1:80969270-80969289 | None:intergenic | 30.0% |
| !!! | GATTAATGTTTTGATTGCCA+AGG | - | chr4.1:80966002-80966021 | None:intergenic | 30.0% |
| !!! | TGACTTTTCTGAAACAATTC+AGG | + | chr4.1:80967449-80967468 | MS.gene037436:intron | 30.0% |
| !!! | TTGTACCAAGCAATTTTTTC+AGG | - | chr4.1:80970023-80970042 | None:intergenic | 30.0% |
| AAACCACCGATATAACTTCA+TGG | + | chr4.1:80969384-80969403 | MS.gene037436:intron | 35.0% | |
| AAATGGACCATGGTTTGAAT+TGG | - | chr4.1:80968021-80968040 | None:intergenic | 35.0% | |
| AACTGATAATTTCCACATGG+AGG | + | chr4.1:80969361-80969380 | MS.gene037436:intron | 35.0% | |
| AATGGACCATGGTTTGAATT+GGG | - | chr4.1:80968020-80968039 | None:intergenic | 35.0% | |
| ACAAGGATTGTGCTTTCTTA+TGG | - | chr4.1:80968613-80968632 | None:intergenic | 35.0% | |
| ATATTCAAAGGGTTCTTGGA+GGG | + | chr4.1:80970582-80970601 | MS.gene037436:CDS | 35.0% | |
| ATGAAGAAGTGACACATACA+CGG | + | chr4.1:80968094-80968113 | MS.gene037436:intron | 35.0% | |
| CAAGAAAAGGAAGGATGAAA+TGG | - | chr4.1:80967252-80967271 | None:intergenic | 35.0% | |
| CTATCTTTACTAGCTCGTAT+TGG | + | chr4.1:80967991-80968010 | MS.gene037436:intron | 35.0% | |
| GACTCTAGTATGAACACTTA+AGG | - | chr4.1:80967308-80967327 | None:intergenic | 35.0% | |
| GAGAACAAAAAAATGGACCA+TGG | - | chr4.1:80968031-80968050 | None:intergenic | 35.0% | |
| GAGGCAGTTATGAAAGAATT+TGG | + | chr4.1:80966307-80966326 | MS.gene037436:CDS | 35.0% | |
| GAGTAACAATTTGCCTGATT+TGG | + | chr4.1:80966330-80966349 | MS.gene037436:CDS | 35.0% | |
| GATAAGTATGCTATTCTTGC+AGG | + | chr4.1:80970641-80970660 | MS.gene037436:CDS | 35.0% | |
| GCACTAAACCTCAATAGAAA+CGG | - | chr4.1:80970350-80970369 | None:intergenic | 35.0% | |
| GCGCACATACACATATATAT+GGG | - | chr4.1:80967666-80967685 | None:intergenic | 35.0% | |
| GGTCTGTTTGAGAGTTTAAA+AGG | - | chr4.1:80967287-80967306 | None:intergenic | 35.0% | |
| GGTTGGACATGAGAAATTTA+TGG | - | chr4.1:80968526-80968545 | None:intergenic | 35.0% | |
| TATATTCAAAGGGTTCTTGG+AGG | + | chr4.1:80970581-80970600 | MS.gene037436:CDS | 35.0% | |
| TGACTTCATGTCTATTTGCA+AGG | + | chr4.1:80966378-80966397 | MS.gene037436:CDS | 35.0% | |
| TGCGCACATACACATATATA+TGG | - | chr4.1:80967667-80967686 | None:intergenic | 35.0% | |
| TTAATCTTTGTCACATTCGC+GGG | + | chr4.1:80966016-80966035 | MS.gene037436:CDS | 35.0% | |
| TTAGAAATTGGTGGGAAAAG+TGG | - | chr4.1:80965794-80965813 | None:intergenic | 35.0% | |
| TTGCACTCTTAACCTTCTTA+TGG | + | chr4.1:80969943-80969962 | MS.gene037436:CDS | 35.0% | |
| TTTATGTGGTACAAGCTGTA+CGG | - | chr4.1:80968564-80968583 | None:intergenic | 35.0% | |
| TTTCTTGAATCAGTTGCCTT+TGG | + | chr4.1:80970514-80970533 | MS.gene037436:CDS | 35.0% | |
| ! | AAGGTTAAGAGTGCAAATAG+AGG | - | chr4.1:80969939-80969958 | None:intergenic | 35.0% |
| ! | AGAAGCTTGTTTCTTGGTAA+TGG | - | chr4.1:80969870-80969889 | None:intergenic | 35.0% |
| ! | AGGTTAAGAGTGCAAATAGA+GGG | - | chr4.1:80969938-80969957 | None:intergenic | 35.0% |
| ! | ATTGGTTTACTCTGTTGTAC+CGG | - | chr4.1:80968211-80968230 | None:intergenic | 35.0% |
| ! | CTGGATCTAAAACTGTTCTA+TGG | - | chr4.1:80970136-80970155 | None:intergenic | 35.0% |
| ! | GAAGCTTGTTTCTTGGTAAT+GGG | - | chr4.1:80969869-80969888 | None:intergenic | 35.0% |
| ! | TTCGTGTATAATTTTTCCGG+TGG | + | chr4.1:80967926-80967945 | MS.gene037436:intron | 35.0% |
| !! | ACTAGTCAATTGAGTTGAGT+TGG | + | chr4.1:80968313-80968332 | MS.gene037436:intron | 35.0% |
| !! | ATACTGGAGGATATTTTGGA+TGG | - | chr4.1:80967136-80967155 | None:intergenic | 35.0% |
| !! | GACATTTTTGGGAGTAGATA+AGG | + | chr4.1:80966195-80966214 | MS.gene037436:CDS | 35.0% |
| !! | GAGGATATTTTGGATGGTTT+GGG | - | chr4.1:80967130-80967149 | None:intergenic | 35.0% |
| !! | GTTTTAGATCCAGTTGTTAC+AGG | + | chr4.1:80970143-80970162 | MS.gene037436:CDS | 35.0% |
| !! | TGTATGTGTCACTTCTTCAT+AGG | - | chr4.1:80968094-80968113 | None:intergenic | 35.0% |
| !! | TTCAATCAAAAGTATCGTGC+CGG | + | chr4.1:80968189-80968208 | MS.gene037436:intron | 35.0% |
| !!! | AACACCACTTTGACCTTTTT+TGG | - | chr4.1:80970099-80970118 | None:intergenic | 35.0% |
| !!! | ACACCACTTTGACCTTTTTT+GGG | - | chr4.1:80970098-80970117 | None:intergenic | 35.0% |
| !!! | GCCCCTAATTTTTTGATGTT+GGG | + | chr4.1:80967835-80967854 | MS.gene037436:intron | 35.0% |
| AAGGGAAAGAGATAGAGATG+CGG | + | chr4.1:80970256-80970275 | MS.gene037436:CDS | 40.0% | |
| AAGTCTAGGGGAATATCACA+AGG | - | chr4.1:80968630-80968649 | None:intergenic | 40.0% | |
| AATGCAACTCCTGTAACAAC+TGG | - | chr4.1:80970155-80970174 | None:intergenic | 40.0% | |
| AATTGGTGGGAAAAGTGGAA+AGG | - | chr4.1:80965789-80965808 | None:intergenic | 40.0% | |
| ACCTTCTTATGGATGCCAAT+TGG | + | chr4.1:80969954-80969973 | MS.gene037436:CDS | 40.0% | |
| ATAGATGATTTCGAGAGCAG+TGG | - | chr4.1:80967224-80967243 | None:intergenic | 40.0% | |
| ATGGACCATGGTTTGAATTG+GGG | - | chr4.1:80968019-80968038 | None:intergenic | 40.0% | |
| CACATTACAGGAAGGATACA+TGG | + | chr4.1:80969824-80969843 | MS.gene037436:intron | 40.0% | |
| CATGTTCCATGTGTAACAAG+AGG | - | chr4.1:80966567-80966586 | None:intergenic | 40.0% | |
| CCAATCACATCTCAACATAG+TGG | + | chr4.1:80968406-80968425 | MS.gene037436:intron | 40.0% | |
| CCACTATGTTGAGATGTGAT+TGG | - | chr4.1:80968409-80968428 | None:intergenic | 40.0% | |
| CTAGATCCTCTTGTTACACA+TGG | + | chr4.1:80966558-80966577 | MS.gene037436:intron | 40.0% | |
| GAGAGCTTTCAAGAAAAGGA+AGG | - | chr4.1:80967261-80967280 | None:intergenic | 40.0% | |
| GATGGTTACAAAAACAGGGA+GGG | + | chr4.1:80966234-80966253 | MS.gene037436:CDS | 40.0% | |
| GGCTTGGAATAGTAATAGGT+TGG | - | chr4.1:80968543-80968562 | None:intergenic | 40.0% | |
| GTAGAGAACCGTTTCTATTG+AGG | + | chr4.1:80970339-80970358 | MS.gene037436:CDS | 40.0% | |
| GTTGTTACAGGAGTTGCATT+AGG | + | chr4.1:80970155-80970174 | MS.gene037436:CDS | 40.0% | |
| TAATCTTTGTCACATTCGCG+GGG | + | chr4.1:80966017-80966036 | MS.gene037436:CDS | 40.0% | |
| TAGATGATTTCGAGAGCAGT+GGG | - | chr4.1:80967223-80967242 | None:intergenic | 40.0% | |
| TCCAATTGGCATCCATAAGA+AGG | - | chr4.1:80969958-80969977 | None:intergenic | 40.0% | |
| TGATGGTTACAAAAACAGGG+AGG | + | chr4.1:80966233-80966252 | MS.gene037436:CDS | 40.0% | |
| TGTGGGCCATGAAGTTATAT+CGG | - | chr4.1:80969393-80969412 | None:intergenic | 40.0% | |
| TTTGGGAGTAAGCTCTCTTT+GGG | + | chr4.1:80966977-80966996 | MS.gene037436:intron | 40.0% | |
| ! | AGGTGACTTAGTGATTTGTC+CGG | + | chr4.1:80970304-80970323 | MS.gene037436:CDS | 40.0% |
| ! | ATCATAGGGTCCGTTTGTTA+CGG | + | chr4.1:80968879-80968898 | MS.gene037436:intron | 40.0% |
| ! | CAGGGACTTTTTGTTGAGTA+AGG | + | chr4.1:80968703-80968722 | MS.gene037436:intron | 40.0% |
| ! | GGTTAAGAGTGCAAATAGAG+GGG | - | chr4.1:80969937-80969956 | None:intergenic | 40.0% |
| ! | GTACGGCTTGGAATAGTAAT+AGG | - | chr4.1:80968547-80968566 | None:intergenic | 40.0% |
| ! | GTGATCTCATAAGTTGGCAT+AGG | - | chr4.1:80970494-80970513 | None:intergenic | 40.0% |
| ! | TGTTGGTGAACACAAGAAAG+AGG | + | chr4.1:80966288-80966307 | MS.gene037436:CDS | 40.0% |
| ! | TTTGGATGGTTTGGGAGATT+CGG | - | chr4.1:80967122-80967141 | None:intergenic | 40.0% |
| !! | AAGGGGGTTTTATATCTTGG+AGG | + | chr4.1:80967178-80967197 | MS.gene037436:intron | 40.0% |
| !! | AATTTGCCTGATTTGGGACT+GGG | + | chr4.1:80966337-80966356 | MS.gene037436:CDS | 40.0% |
| !! | ATGTGTCACTTCTTCATAGG+TGG | - | chr4.1:80968091-80968110 | None:intergenic | 40.0% |
| !! | GGAGGATATTTTGGATGGTT+TGG | - | chr4.1:80967131-80967150 | None:intergenic | 40.0% |
| !! | GGCACGATACTTTTGATTGA+AGG | - | chr4.1:80968190-80968209 | None:intergenic | 40.0% |
| !! | TCTTGGTAATGGGTCACATT+TGG | - | chr4.1:80969859-80969878 | None:intergenic | 40.0% |
| !! | TGGAAGGTGTTCAATTCGTT+CGG | + | chr4.1:80966118-80966137 | MS.gene037436:CDS | 40.0% |
| !! | TTTTGGGAGTAAGCTCTCTT+TGG | + | chr4.1:80966976-80966995 | MS.gene037436:intron | 40.0% |
| !!! | CAAATAGAGGGGTTGGTTTT+TGG | - | chr4.1:80969926-80969945 | None:intergenic | 40.0% |
| !!! | GGCCCCTAATTTTTTGATGT+TGG | + | chr4.1:80967834-80967853 | MS.gene037436:intron | 40.0% |
| !!! | TGTTTTGATTGCCAAGGTCT+CGG | - | chr4.1:80965996-80966015 | None:intergenic | 40.0% |
| AAAAGCCGTTGCGCTTTCAA+GGG | + | chr4.1:80970238-80970257 | MS.gene037436:CDS | 45.0% | |
| AAAGGAAGGGGAGAACTTTG+GGG | + | chr4.1:80967012-80967031 | MS.gene037436:intron | 45.0% | |
| AAGGAACCAGGAGTTCTTGT+TGG | + | chr4.1:80966271-80966290 | MS.gene037436:CDS | 45.0% | |
| AATGGCTCAACCATCAACCT+TGG | - | chr4.1:80966169-80966188 | None:intergenic | 45.0% | |
| AATGGGTCACATTTGGTCCT+TGG | - | chr4.1:80969852-80969871 | None:intergenic | 45.0% | |
| AGATAGATCAAACCAGACCG+TGG | + | chr4.1:80965826-80965845 | MS.gene037436:CDS | 45.0% | |
| AGGAAGGATACATGGTACCA+AGG | + | chr4.1:80969832-80969851 | MS.gene037436:intron | 45.0% | |
| AGTGCGATGAGCATGTAGTA+TGG | - | chr4.1:80965896-80965915 | None:intergenic | 45.0% | |
| CATGGCCCACAAAACAGTTA+AGG | + | chr4.1:80969402-80969421 | MS.gene037436:intron | 45.0% | |
| CCACCCAAAAAAGGTCAAAG+TGG | + | chr4.1:80970092-80970111 | MS.gene037436:CDS | 45.0% | |
| CCACTGCAAGTCAATTCCAA+AGG | - | chr4.1:80970533-80970552 | None:intergenic | 45.0% | |
| CGGGAAACGATACATTGTCA+CGG | + | chr4.1:80966138-80966157 | MS.gene037436:CDS | 45.0% | |
| GAAAGGAAGGGGAGAACTTT+GGG | + | chr4.1:80967011-80967030 | MS.gene037436:intron | 45.0% | |
| GCTATTCTTGCAGGAACAGA+TGG | + | chr4.1:80970650-80970669 | MS.gene037436:CDS | 45.0% | |
| GCTTCGTATTAATCGCGACA+GGG | - | chr4.1:80970403-80970422 | None:intergenic | 45.0% | |
| GGGAGAGAGCTTTCAAGAAA+AGG | - | chr4.1:80967265-80967284 | None:intergenic | 45.0% | |
| TAAAAGCCGTTGCGCTTTCA+AGG | + | chr4.1:80970237-80970256 | MS.gene037436:CDS | 45.0% | |
| TCTCTACATGTCGTTCCTTC+CGG | - | chr4.1:80970326-80970345 | None:intergenic | 45.0% | |
| TGCTTCGTATTAATCGCGAC+AGG | - | chr4.1:80970404-80970423 | None:intergenic | 45.0% | |
| TGGACCATGGTTTGAATTGG+GGG | - | chr4.1:80968018-80968037 | None:intergenic | 45.0% | |
| TGTTCACCAACAAGAACTCC+TGG | - | chr4.1:80966280-80966299 | None:intergenic | 45.0% | |
| TTGAACACCTTCCATGTCTC+TGG | - | chr4.1:80966112-80966131 | None:intergenic | 45.0% | |
| ! | AAGAGTGCAAATAGAGGGGT+TGG | - | chr4.1:80969933-80969952 | None:intergenic | 45.0% |
| ! | GACTTAGTGATTTGTCCGGA+AGG | + | chr4.1:80970308-80970327 | MS.gene037436:CDS | 45.0% |
| ! | GAGACGTGGAGATTGTTTCT+CGG | + | chr4.1:80966050-80966069 | MS.gene037436:CDS | 45.0% |
| ! | GGGCTTAGAAGCTTGTTTCT+TGG | - | chr4.1:80969876-80969895 | None:intergenic | 45.0% |
| ! | TCTTTCCCTTGAAAGCGCAA+CGG | - | chr4.1:80970246-80970265 | None:intergenic | 45.0% |
| ! | TGGGAGTAGATAAGGTGCTA+GGG | + | chr4.1:80966203-80966222 | MS.gene037436:CDS | 45.0% |
| ! | TTGGGAGTAGATAAGGTGCT+AGG | + | chr4.1:80966202-80966221 | MS.gene037436:CDS | 45.0% |
| !! | AGTGGGTTTGTTAAGGAACC+AGG | + | chr4.1:80966259-80966278 | MS.gene037436:CDS | 45.0% |
| !! | CAATTTGCCTGATTTGGGAC+TGG | + | chr4.1:80966336-80966355 | MS.gene037436:CDS | 45.0% |
| !! | CCTTTGGAATTGACTTGCAG+TGG | + | chr4.1:80970530-80970549 | MS.gene037436:CDS | 45.0% |
| !! | GAAAGCGCAACGGCTTTTAT+AGG | - | chr4.1:80970236-80970255 | None:intergenic | 45.0% |
| !! | GGAAGGTGTTCAATTCGTTC+GGG | + | chr4.1:80966119-80966138 | MS.gene037436:CDS | 45.0% |
| !! | TGGAATTGACTTGCAGTGGA+GGG | + | chr4.1:80970534-80970553 | MS.gene037436:CDS | 45.0% |
| !! | TTCGAGAGCAGTGGGTTTTT+GGG | - | chr4.1:80967215-80967234 | None:intergenic | 45.0% |
| !! | TTGGAATTGACTTGCAGTGG+AGG | + | chr4.1:80970533-80970552 | MS.gene037436:CDS | 45.0% |
| !! | TTTCGAGAGCAGTGGGTTTT+TGG | - | chr4.1:80967216-80967235 | None:intergenic | 45.0% |
| !!! | CCACTTTGACCTTTTTTGGG+TGG | - | chr4.1:80970095-80970114 | None:intergenic | 45.0% |
| !!! | CTTTGACCTTTTTTGGGTGG+TGG | - | chr4.1:80970092-80970111 | None:intergenic | 45.0% |
| !!! | TTTTATGGAACATCGGCTCG+CGG | + | chr4.1:80970431-80970450 | MS.gene037436:CDS | 45.0% |
| !! | ATAAAATTTAATTACATTTA+TGG | + | chr4.1:80968763-80968782 | MS.gene037436:intron | 5.0% |
| AAAGACAGATGGAGCAGACC+AGG | - | chr4.1:80967969-80967988 | None:intergenic | 50.0% | |
| AAGACAGATGGAGCAGACCA+GGG | - | chr4.1:80967968-80967987 | None:intergenic | 50.0% | |
| ACAAAAACAGGGAGGGCAAG+TGG | + | chr4.1:80966241-80966260 | MS.gene037436:CDS | 50.0% | |
| ATGCTCATCGCACTTGAAGC+TGG | + | chr4.1:80965902-80965921 | MS.gene037436:CDS | 50.0% | |
| CAAAAACAGGGAGGGCAAGT+GGG | + | chr4.1:80966242-80966261 | MS.gene037436:CDS | 50.0% | |
| CCAAGGTCTCGGAGACAAAT+AGG | - | chr4.1:80965985-80966004 | None:intergenic | 50.0% | |
| CCTATTTGTCTCCGAGACCT+TGG | + | chr4.1:80965982-80966001 | MS.gene037436:CDS | 50.0% | |
| GGAAAGGAAGGGGAGAACTT+TGG | + | chr4.1:80967010-80967029 | MS.gene037436:intron | 50.0% | |
| GGGCCATGAAGTTATATCGG+TGG | - | chr4.1:80969390-80969409 | None:intergenic | 50.0% | |
| GGTGCTAGGGACTGAATTGA+TGG | + | chr4.1:80966216-80966235 | MS.gene037436:CDS | 50.0% | |
| TATCGGTGGTTTCCTCCATG+TGG | - | chr4.1:80969376-80969395 | None:intergenic | 50.0% | |
| TGGTCCCCCAATTCAAACCA+TGG | + | chr4.1:80968011-80968030 | MS.gene037436:intron | 50.0% | |
| TTTCTCGGTCAGTGTTGCCT+AGG | + | chr4.1:80966065-80966084 | MS.gene037436:CDS | 50.0% | |
| ! | ACATTGTCACGGCTAGTCCA+AGG | + | chr4.1:80966149-80966168 | MS.gene037436:CDS | 50.0% |
| !! | GAGGGCAAGTGGGTTTGTTA+AGG | + | chr4.1:80966252-80966271 | MS.gene037436:CDS | 50.0% |
| !! | TCGAGAGCAGTGGGTTTTTG+GGG | - | chr4.1:80967214-80967233 | None:intergenic | 50.0% |
| !!! | ACCAGGGGAGCAGTTTTGTT+AGG | - | chr4.1:80967952-80967971 | None:intergenic | 50.0% |
| !!! | GAGCAGTTTTGTTAGGCCAC+CGG | - | chr4.1:80967945-80967964 | None:intergenic | 50.0% |
| !!! | TGACCTTTTTTGGGTGGTGG+TGG | - | chr4.1:80970089-80970108 | None:intergenic | 50.0% |
| ACCGTGGCATCCGACTTAGA+CGG | + | chr4.1:80965842-80965861 | MS.gene037436:CDS | 55.0% | |
| ACGTCCTCGGCATAGAACCT+AGG | - | chr4.1:80966085-80966104 | None:intergenic | 55.0% | |
| AGACAGATGGAGCAGACCAG+GGG | - | chr4.1:80967967-80967986 | None:intergenic | 55.0% | |
| AGGACGTGCATCCAGAGACA+TGG | + | chr4.1:80966098-80966117 | MS.gene037436:CDS | 55.0% | |
| AGGGTTCTTGGAGGGACTCT+TGG | + | chr4.1:80970590-80970609 | MS.gene037436:CDS | 55.0% | |
| AGTCTCGAGGGGAAAGGAAG+GGG | + | chr4.1:80967000-80967019 | MS.gene037436:intron | 55.0% | |
| ATGCACTTCGCGACACGAGA+AGG | - | chr4.1:80965871-80965890 | None:intergenic | 55.0% | |
| CCTCCACCACCACCCAAAAA+AGG | + | chr4.1:80970083-80970102 | MS.gene037436:CDS | 55.0% | |
| CGTGCATCCAGAGACATGGA+AGG | + | chr4.1:80966102-80966121 | MS.gene037436:CDS | 55.0% | |
| CTGTCTCCCAGTCCCAAATC+AGG | - | chr4.1:80966346-80966365 | None:intergenic | 55.0% | |
| GAGTCTCGAGGGGAAAGGAA+GGG | + | chr4.1:80966999-80967018 | MS.gene037436:intron | 55.0% | |
| GCCTAACAAAACTGCTCCCC+TGG | + | chr4.1:80967948-80967967 | MS.gene037436:intron | 55.0% | |
| GGCTCGCGGACACAAATTGT+TGG | + | chr4.1:80970445-80970464 | MS.gene037436:CDS | 55.0% | |
| GGGGCTAAGGATAAGAGACG+TGG | + | chr4.1:80966036-80966055 | MS.gene037436:CDS | 55.0% | |
| GTGGTACAAGCTGTACGGCT+TGG | - | chr4.1:80968559-80968578 | None:intergenic | 55.0% | |
| GTTGCCTAGGTTCTATGCCG+AGG | + | chr4.1:80966078-80966097 | MS.gene037436:CDS | 55.0% | |
| TGCACTTCGCGACACGAGAA+GGG | - | chr4.1:80965870-80965889 | None:intergenic | 55.0% | |
| TGTCTCTGGATGCACGTCCT+CGG | - | chr4.1:80966098-80966117 | None:intergenic | 55.0% | |
| TTGTCACATTCGCGGGGCTA+AGG | + | chr4.1:80966023-80966042 | MS.gene037436:CDS | 55.0% | |
| TTTGGGAGTCTCGAGGGGAA+AGG | + | chr4.1:80966994-80967013 | MS.gene037436:intron | 55.0% | |
| ! | AGCTCTCTTTGGGAGTCTCG+AGG | + | chr4.1:80966987-80967006 | MS.gene037436:intron | 55.0% |
| ! | CACGGCTAGTCCAAGGTTGA+TGG | + | chr4.1:80966156-80966175 | MS.gene037436:CDS | 55.0% |
| ! | CTCTCTTTGGGAGTCTCGAG+GGG | + | chr4.1:80966989-80967008 | MS.gene037436:intron | 55.0% |
| ! | GCTCTCTTTGGGAGTCTCGA+GGG | + | chr4.1:80966988-80967007 | MS.gene037436:intron | 55.0% |
| !! | CGAGAGCAGTGGGTTTTTGG+GGG | - | chr4.1:80967213-80967232 | None:intergenic | 55.0% |
| !! | GAGAAGGGTGCCGTCTAAGT+CGG | - | chr4.1:80965855-80965874 | None:intergenic | 55.0% |
| !! | GAGAGCAGTGGGTTTTTGGG+GGG | - | chr4.1:80967212-80967231 | None:intergenic | 55.0% |
| !!! | CCTTTTTTGGGTGGTGGTGG+AGG | - | chr4.1:80970086-80970105 | None:intergenic | 55.0% |
| CTAAGTCGGATGCCACGGTC+TGG | - | chr4.1:80965841-80965860 | None:intergenic | 60.0% | |
| GCCGTCTAAGTCGGATGCCA+CGG | - | chr4.1:80965846-80965865 | None:intergenic | 60.0% | |
| GGAGTCTCGAGGGGAAAGGA+AGG | + | chr4.1:80966998-80967017 | MS.gene037436:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 80965779 | 80970700 | 80965779 | ID=MS.gene037436 |
| chr4.1 | mRNA | 80965779 | 80970700 | 80965779 | ID=MS.gene037436.t1;Parent=MS.gene037436 |
| chr4.1 | exon | 80965779 | 80966399 | 80965779 | ID=MS.gene037436.t1.exon1;Parent=MS.gene037436.t1 |
| chr4.1 | CDS | 80965779 | 80966399 | 80965779 | ID=cds.MS.gene037436.t1;Parent=MS.gene037436.t1 |
| chr4.1 | exon | 80969834 | 80970700 | 80969834 | ID=MS.gene037436.t1.exon2;Parent=MS.gene037436.t1 |
| chr4.1 | CDS | 80969834 | 80970700 | 80969834 | ID=cds.MS.gene037436.t1;Parent=MS.gene037436.t1 |
| Gene Sequence |
| Protein sequence |
