AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene038010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038010.t1 MTR_1g069110 73.577 492 93 4 1 489 1 458 0.0 703
MS.gene038010.t1 MTR_7g099570 46.048 291 142 5 10 286 1 290 6.51e-74 244
MS.gene038010.t1 MTR_7g099570 53.191 188 87 1 280 466 402 589 7.33e-59 204
MS.gene038010.t1 MTR_7g099580 40.237 338 132 8 10 341 4 277 2.28e-71 230
MS.gene038010.t1 MTR_7g099560 38.760 258 82 7 213 468 1 184 3.13e-43 153
MS.gene038010.t1 MTR_8g039620 27.970 404 249 8 5 393 1 377 7.25e-39 147
MS.gene038010.t1 MTR_8g073260 29.293 396 230 12 5 380 1 366 8.53e-39 147
MS.gene038010.t1 MTR_3g016210 26.891 476 286 13 5 457 1 437 3.82e-38 145
MS.gene038010.t1 MTR_8g069880 25.000 480 296 11 21 483 10 442 2.97e-37 142
MS.gene038010.t1 MTR_8g072510 26.115 471 280 13 21 469 13 437 7.81e-37 141
MS.gene038010.t1 MTR_8g068990 28.312 385 222 9 21 391 15 359 3.93e-36 139
MS.gene038010.t1 MTR_7g021090 27.543 403 235 12 5 391 1 362 1.63e-35 137
MS.gene038010.t1 MTR_7g099550 56.731 104 45 0 77 180 136 239 7.37e-35 130
MS.gene038010.t1 MTR_2g101310 26.281 449 249 11 46 430 134 564 2.45e-33 134
MS.gene038010.t1 MTR_2g101310 30.348 201 131 5 12 209 33 227 4.07e-14 75.1
MS.gene038010.t1 MTR_8g062410 25.806 465 286 12 5 456 1 419 2.83e-33 131
MS.gene038010.t1 MTR_8g066670 25.684 475 289 14 3 458 1065 1494 1.10e-32 133
MS.gene038010.t1 MTR_8g467780 27.040 429 261 11 21 429 14 410 3.59e-32 128
MS.gene038010.t1 MTR_7g087540 39.429 175 84 5 297 468 24 179 9.27e-32 120
MS.gene038010.t1 MTR_3g105650 24.664 446 272 10 21 453 8 402 1.91e-30 123
MS.gene038010.t1 MTR_2g101320 25.333 450 253 9 46 430 134 565 7.88e-30 123
MS.gene038010.t1 MTR_8g019450 35.398 226 112 8 272 465 2 225 1.38e-29 116
MS.gene038010.t1 MTR_1g059930 27.822 381 227 12 18 381 12 361 5.72e-29 119
MS.gene038010.t1 MTR_7g451420 27.616 344 207 8 5 338 1 312 1.84e-28 115
MS.gene038010.t1 MTR_0514s0010 33.333 228 121 7 268 465 1 227 3.40e-28 112
MS.gene038010.t1 MTR_8g040930 27.429 350 204 9 60 390 1 319 6.61e-28 115
MS.gene038010.t1 MTR_8g041240 27.429 350 204 9 60 390 1 319 6.61e-28 115
MS.gene038010.t1 MTR_0470s0020 35.714 210 109 6 281 465 17 225 1.12e-27 111
MS.gene038010.t1 MTR_8g019050 35.714 210 109 6 281 465 17 225 1.12e-27 111
MS.gene038010.t1 MTR_8g018980 35.268 224 115 8 272 465 2 225 1.40e-27 110
MS.gene038010.t1 MTR_8g019260 37.013 154 96 1 305 457 12 165 4.95e-27 107
MS.gene038010.t1 MTR_8g019110 37.013 154 96 1 305 457 12 165 4.95e-27 107
MS.gene038010.t1 MTR_1g115575 24.686 478 316 14 18 488 135 575 8.80e-27 114
MS.gene038010.t1 MTR_2g096190 25.121 414 240 11 21 420 108 465 2.79e-26 112
MS.gene038010.t1 MTR_8g019290 41.085 129 72 3 306 432 13 139 1.36e-25 103
MS.gene038010.t1 MTR_4g062100 25.067 375 256 9 53 420 108 464 4.01e-25 108
MS.gene038010.t1 MTR_2g101310 25.490 357 202 8 49 344 137 490 6.38e-25 108
MS.gene038010.t1 MTR_2g101310 30.348 201 131 5 12 209 33 227 1.34e-13 73.2
MS.gene038010.t1 MTR_7g117620 25.051 495 316 16 9 488 78 532 5.81e-24 105
MS.gene038010.t1 MTR_1g032100 25.581 387 263 8 9 392 50 414 2.07e-23 103
MS.gene038010.t1 MTR_0470s0010 28.804 184 106 4 282 457 6 172 3.12e-22 94.4
MS.gene038010.t1 MTR_8g019020 28.804 184 106 4 282 457 6 172 3.12e-22 94.4
MS.gene038010.t1 MTR_8g019380 31.278 227 123 8 272 469 2 224 3.12e-22 96.7
MS.gene038010.t1 MTR_7g087560 34.682 173 80 4 297 469 24 163 4.55e-22 93.6
MS.gene038010.t1 MTR_7g055630 36.842 133 77 3 306 432 14 145 7.95e-22 93.2
MS.gene038010.t1 MTR_7g100390 25.416 421 270 15 18 420 53 447 2.03e-21 97.4
MS.gene038010.t1 MTR_8g019280 35.714 140 90 0 324 463 1 140 2.54e-21 90.9
MS.gene038010.t1 MTR_7g099600 55.814 86 38 0 371 456 2 87 4.91e-21 87.8
MS.gene038010.t1 MTR_7g100430 25.788 349 225 11 43 385 148 468 1.38e-20 95.5
MS.gene038010.t1 MTR_8g105260 23.276 348 244 6 47 392 95 421 7.79e-20 92.8
MS.gene038010.t1 MTR_8g019060 31.455 213 130 5 267 465 41 251 3.75e-19 90.1
MS.gene038010.t1 MTR_8g019060 31.492 181 115 5 296 468 267 446 8.17e-17 83.2
MS.gene038010.t1 MTR_2g033050 28.655 171 119 2 64 231 212 382 2.94e-15 78.2
MS.gene038010.t1 MTR_5g085810 22.782 417 262 12 47 436 298 681 6.96e-15 77.8
MS.gene038010.t1 MTR_5g085480 23.171 492 279 15 18 463 54 492 1.37e-14 76.6
MS.gene038010.t1 MTR_8g019440 33.333 162 101 2 311 465 2 163 1.59e-14 72.4
MS.gene038010.t1 MTR_5g085480 23.171 492 279 15 18 463 214 652 1.84e-14 76.6
MS.gene038010.t1 MTR_5g085830 22.991 448 275 16 18 436 247 653 3.20e-14 75.9
MS.gene038010.t1 MTR_5g085500 28.205 156 109 2 80 232 1 156 1.52e-12 70.1
MS.gene038010.t1 MTR_2g096760 30.409 171 104 5 50 208 11 178 1.93e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038010.t1 AT5G51160 29.894 378 229 10 69 432 34 389 2.34e-39 148
MS.gene038010.t1 AT4G10720 27.160 405 247 10 25 416 12 381 5.68e-38 144
MS.gene038010.t1 AT4G10720 29.483 329 197 7 25 340 12 318 1.73e-36 139
MS.gene038010.t1 AT1G14500 25.843 445 264 13 18 437 5 408 1.33e-32 129
MS.gene038010.t1 AT5G15500 27.957 465 270 17 16 465 4 418 2.10e-31 126
MS.gene038010.t1 AT1G14480 22.857 455 299 9 18 461 5 418 4.10e-30 122
MS.gene038010.t1 AT3G13950 37.368 190 113 3 281 466 4 191 3.17e-29 114
MS.gene038010.t1 AT4G13266 33.824 204 117 6 274 468 2 196 1.05e-27 110
MS.gene038010.t1 AT5G54620 26.625 323 199 7 24 332 11 309 5.86e-26 110
MS.gene038010.t1 AT3G09550 24.257 404 257 11 28 420 173 538 9.87e-26 111
MS.gene038010.t1 AT3G09550 24.257 404 257 11 28 420 166 531 1.06e-25 111
MS.gene038010.t1 AT3G09550 24.257 404 257 11 28 420 166 531 1.06e-25 111
MS.gene038010.t1 AT5G60070 26.632 383 256 10 53 427 111 476 1.72e-25 110
MS.gene038010.t1 AT3G12360 26.509 381 237 11 53 420 167 517 2.40e-25 110
MS.gene038010.t1 AT3G12360 33.071 127 82 3 18 144 202 325 4.73e-11 65.5
MS.gene038010.t1 AT3G12360 26.509 381 237 11 53 420 155 505 2.47e-25 109
MS.gene038010.t1 AT3G12360 33.071 127 82 3 18 144 190 313 4.87e-11 65.5
MS.gene038010.t1 AT5G54610 28.037 321 189 8 24 329 11 304 1.08e-24 106
MS.gene038010.t1 AT2G01680 23.276 348 244 6 47 392 91 417 5.66e-22 99.4
MS.gene038010.t1 AT5G54710 24.259 371 253 9 69 431 227 577 1.64e-21 98.6
MS.gene038010.t1 AT2G31820 25.754 431 276 15 5 420 182 583 1.68e-21 98.6
MS.gene038010.t1 AT5G54710 23.989 371 254 9 69 431 182 532 1.82e-21 98.2
MS.gene038010.t1 AT5G02620 24.051 395 241 11 54 420 95 458 2.12e-20 94.7
MS.gene038010.t1 AT5G02620 24.051 395 241 11 54 420 95 458 2.12e-20 94.7
MS.gene038010.t1 AT5G02620 24.051 395 241 11 54 420 95 458 2.12e-20 94.7
MS.gene038010.t1 AT1G34050 24.267 375 244 9 64 430 161 503 2.45e-20 94.7
MS.gene038010.t1 AT1G05640 25.467 428 274 16 9 420 150 548 4.40e-20 94.0
MS.gene038010.t1 AT1G07710 24.893 466 282 12 21 479 108 512 3.82e-19 90.9
MS.gene038010.t1 AT1G07710 24.893 466 282 12 21 479 108 512 3.82e-19 90.9
MS.gene038010.t1 AT1G14480 31.169 154 105 1 18 170 5 158 5.67e-19 89.4
MS.gene038010.t1 AT1G10340 23.953 430 270 14 34 437 118 516 1.76e-18 89.0
MS.gene038010.t1 AT5G54700 23.450 371 204 11 115 480 28 323 2.04e-18 87.0
MS.gene038010.t1 AT1G10340 24.339 378 240 12 81 437 168 520 2.80e-18 88.2
MS.gene038010.t1 AT5G02620 23.317 416 241 12 54 420 95 481 3.44e-17 84.7
MS.gene038010.t1 AT5G02620 23.317 416 241 12 54 420 95 481 3.44e-17 84.7
MS.gene038010.t1 AT4G03500 23.765 425 249 14 13 420 191 557 7.97e-17 84.0
MS.gene038010.t1 AT4G03500 23.765 425 249 14 13 420 191 557 7.97e-17 84.0
MS.gene038010.t1 AT4G03500 23.765 425 249 14 13 420 214 580 1.00e-16 83.6
MS.gene038010.t1 AT4G03440 24.130 460 279 17 13 454 271 678 1.12e-16 83.6
MS.gene038010.t1 AT4G03440 24.130 460 279 17 13 454 264 671 1.16e-16 83.6
MS.gene038010.t1 AT4G03440 24.130 460 279 17 13 454 264 671 1.16e-16 83.6
MS.gene038010.t1 AT4G03470 24.000 375 219 11 64 428 284 602 3.26e-16 82.0
MS.gene038010.t1 AT4G03450 21.649 388 240 12 54 428 227 563 7.48e-16 80.9
MS.gene038010.t1 AT4G03450 21.649 388 240 12 54 428 227 563 9.94e-16 80.5
MS.gene038010.t1 AT4G03480 23.851 348 207 11 54 391 357 656 2.26e-15 79.3
MS.gene038010.t1 AT4G03480 23.851 348 207 11 54 391 360 659 2.33e-15 79.3
MS.gene038010.t1 AT1G03670 23.316 386 228 11 51 421 216 548 5.22e-15 78.2
MS.gene038010.t1 AT4G05040 25.753 365 195 13 1 350 237 540 2.20e-14 75.9
MS.gene038010.t1 AT4G05040 25.753 365 195 13 1 350 237 540 2.20e-14 75.9
MS.gene038010.t1 AT4G05040 25.753 365 195 13 1 350 237 540 2.20e-14 75.9
MS.gene038010.t1 AT4G05040 25.753 365 195 13 1 350 237 540 2.20e-14 75.9
MS.gene038010.t1 AT4G05040 25.753 365 195 13 1 350 237 540 2.20e-14 75.9
MS.gene038010.t1 AT4G05040 25.753 365 195 13 1 350 237 540 2.20e-14 75.9
MS.gene038010.t1 AT4G05040 25.753 365 195 13 1 350 237 540 2.20e-14 75.9
MS.gene038010.t1 AT4G14390 25.935 428 246 16 5 424 256 620 1.27e-13 73.9
MS.gene038010.t1 AT4G14390 25.234 428 248 15 5 424 237 600 1.57e-13 73.6
MS.gene038010.t1 AT4G14390 25.765 392 222 14 5 391 256 583 1.67e-13 73.6
MS.gene038010.t1 AT5G50140 25.481 208 132 6 49 238 26 228 1.97e-12 69.7
MS.gene038010.t1 AT4G14390 30.047 213 130 5 5 213 237 434 2.41e-12 69.7
MS.gene038010.t1 AT5G15500 27.072 362 199 17 119 465 1 312 4.64e-12 67.8

Find 90 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAATTGAATAACTCCTTTA+AGG 0.092289 1.1:+50599887 None:intergenic
ATTGCTGCTGTTCTTATTTC+AGG 0.164280 1.1:+50597615 None:intergenic
TAACTTGTGCAGTTTGAATT+TGG 0.249371 1.1:+50596837 None:intergenic
TTACATATAGCCTCTCTTCT+TGG 0.260364 1.1:-50600224 MS.gene038010:CDS
ATCTACAATTCCAAGGTAAT+TGG 0.266877 1.1:-50597350 MS.gene038010:CDS
TGTAATGGAGTTTCATTATA+GGG 0.299569 1.1:+50600242 None:intergenic
ACCTTGGAATTGTAGATACT+TGG 0.320981 1.1:+50597356 None:intergenic
ACTCACGTACGCGTTTGCTC+TGG 0.329819 1.1:-50596995 MS.gene038010:CDS
AGTTAGACTCAAACAAATTA+AGG 0.333576 1.1:-50599799 MS.gene038010:intron
ATGTAATGGAGTTTCATTAT+AGG 0.336117 1.1:+50600241 None:intergenic
ACATCATGACCTTATTCTTA+AGG 0.338349 1.1:+50597061 None:intergenic
CATCATGACCTTATTCTTAA+GGG 0.374973 1.1:+50597062 None:intergenic
TGGCAAGAAAATACAAATAC+TGG 0.376493 1.1:-50597237 MS.gene038010:CDS
GTTGTGCTTCTCCTTATTAG+TGG 0.383085 1.1:-50597090 MS.gene038010:CDS
GTACGCGTTTGCTCTGGGTT+TGG 0.383450 1.1:-50596989 MS.gene038010:CDS
GTTACCCGCGTGTTGTAACT+TGG 0.395378 1.1:-50596927 MS.gene038010:CDS
TTGATTTGGTTGTTCTTGAT+TGG 0.397711 1.1:+50597434 None:intergenic
TAAGTCCGCCAGGTGGTGTT+TGG 0.404642 1.1:-50597257 MS.gene038010:CDS
CTGCAAAAGTAAGTATTCTA+TGG 0.406886 1.1:+50597638 None:intergenic
ACTCCTTTAAGGCCTCAAAA+TGG 0.407906 1.1:+50599898 None:intergenic
GGACTCAATTGCACTACTTA+TGG 0.414169 1.1:-50597213 MS.gene038010:CDS
CTCTACAATGCATCACTAAA+CGG 0.416585 1.1:-50600332 MS.gene038010:CDS
AGGGAGAGAGTGAAACTTTG+TGG 0.417625 1.1:+50600261 None:intergenic
AGCAAATGAAGATGTTTGTT+TGG 0.420847 1.1:-50600069 MS.gene038010:CDS
TTCACAACGTGAATCGAATC+TGG 0.421280 1.1:+50599960 None:intergenic
TTTGCATTTAGCTGCGAAAA+GGG 0.427624 1.1:-50600021 MS.gene038010:CDS
GAGTTATTCAATTCAGTAAG+AGG 0.427817 1.1:-50599879 MS.gene038010:CDS
CTTTGCATTTAGCTGCGAAA+AGG 0.427839 1.1:-50600022 MS.gene038010:CDS
CTCACGTACGCGTTTGCTCT+GGG 0.439047 1.1:-50596994 MS.gene038010:CDS
CAGGTCAGGCTTCACAACTT+TGG 0.443752 1.1:-50597583 MS.gene038010:CDS
TCCACTTCATTGGTGAAACT+TGG 0.446592 1.1:+50600164 None:intergenic
TGTGTCATCTTCTAGATTTG+CGG 0.447230 1.1:+50600364 None:intergenic
CAGCAGCAATTGCTATGAAC+AGG 0.467072 1.1:-50597602 MS.gene038010:CDS
AAGAGAGGAAAAGAAAGAAA+TGG 0.476405 1.1:+50597116 None:intergenic
TCTTGATTAGAAGATTGATT+TGG 0.481340 1.1:+50597420 None:intergenic
TTGCACATGTGTATTTGGTA+TGG 0.485137 1.1:-50599921 MS.gene038010:CDS
TTTCTTCTATCCAATTACCT+TGG 0.494158 1.1:+50597340 None:intergenic
GAAGAAATGTTAATTGAAGT+CGG 0.497265 1.1:-50597516 MS.gene038010:CDS
TTACCCGCGTGTTGTAACTT+GGG 0.497451 1.1:-50596926 MS.gene038010:CDS
ACTTGCTGAATAATATGATA+AGG 0.498621 1.1:+50596961 None:intergenic
CTTCATTTAGCTTCAGCTGA+AGG 0.498852 1.1:-50600122 MS.gene038010:CDS
AGAAGAGAGGCTATATGTAA+TGG 0.505246 1.1:+50600227 None:intergenic
GCAATTGCTATGAACAGGTC+AGG 0.512758 1.1:-50597597 MS.gene038010:CDS
ACCAATGAAGTGGACTCAAA+AGG 0.514134 1.1:-50600155 MS.gene038010:CDS
GAAACTTTGTGGAGTAAAAG+AGG 0.514459 1.1:+50600272 None:intergenic
AAGAACATCCAAATGAAAGA+AGG 0.523294 1.1:-50597401 MS.gene038010:CDS
ATTCACGTTGTGAATGATGA+TGG 0.528117 1.1:-50599951 MS.gene038010:CDS
ACTTATGGTGTATGTGAAGC+AGG 0.532106 1.1:-50597198 MS.gene038010:CDS
CTTTGGAGGTGTTAGATCCC+TGG 0.532590 1.1:-50597566 MS.gene038010:CDS
CAAATGAAAGAAGGAAAATG+TGG 0.533149 1.1:-50597392 MS.gene038010:CDS
CAATCAACATTAAGTCCGCC+AGG 0.537352 1.1:-50597267 MS.gene038010:CDS
GTCAGGCTTCACAACTTTGG+AGG 0.538537 1.1:-50597580 MS.gene038010:CDS
CTTTGTGATGCTGCATGTTG+CGG 0.541509 1.1:+50597462 None:intergenic
ACCAAGTTTCACCAATGAAG+TGG 0.544752 1.1:-50600165 MS.gene038010:CDS
TGCATTTAGCTGCGAAAAGG+GGG 0.560379 1.1:-50600019 MS.gene038010:CDS
TTGCATTTAGCTGCGAAAAG+GGG 0.561017 1.1:-50600020 MS.gene038010:CDS
GCTTATAAAATCTCTTGACC+AGG 0.564370 1.1:+50597548 None:intergenic
TACCCGCGTGTTGTAACTTG+GGG 0.566004 1.1:-50596925 MS.gene038010:CDS
GGCGTGGAATTCATATATAC+TGG 0.566937 1.1:+50597483 None:intergenic
AAGGGGAGCATTGATGTTGG+TGG 0.576116 1.1:-50597316 MS.gene038010:CDS
ATCATGACCTTATTCTTAAG+GGG 0.576143 1.1:+50597063 None:intergenic
GAGAAGCACAACACCAAGAG+AGG 0.582743 1.1:+50597101 None:intergenic
AACAAGGGGAGCATTGATGT+TGG 0.590579 1.1:-50597319 MS.gene038010:CDS
CAGCTGAAGCTAAATGAAGA+GGG 0.593840 1.1:+50600126 None:intergenic
TCAGCTGAAGCTAAATGAAG+AGG 0.610021 1.1:+50600125 None:intergenic
TTCTAAGTGTCCAAGAAGAG+AGG 0.612839 1.1:+50600214 None:intergenic
GTAATTGGATAGAAGAAACA+AGG 0.615840 1.1:-50597335 MS.gene038010:CDS
TCCAAGTATCTACAATTCCA+AGG 0.616695 1.1:-50597357 MS.gene038010:CDS
ATGAACTTTACGAATTCATG+TGG 0.618290 1.1:+50597150 None:intergenic
TTAAGAATAAGGTCATGATG+TGG 0.621215 1.1:-50597059 MS.gene038010:CDS
TAATTGGATAGAAGAAACAA+GGG 0.621684 1.1:-50597334 MS.gene038010:CDS
TAAGAATAAGGTCATGATGT+GGG 0.624421 1.1:-50597058 MS.gene038010:CDS
AGCTGAAGGACACACTGAGG+TGG 0.626270 1.1:-50600108 MS.gene038010:CDS
CTTATAAAATCTCTTGACCA+GGG 0.628861 1.1:+50597549 None:intergenic
AAATGAAAGAAGGAAAATGT+GGG 0.636464 1.1:-50597391 MS.gene038010:CDS
TCATGACCTTATTCTTAAGG+GGG 0.638445 1.1:+50597064 None:intergenic
TGATGCTGCATGTTGCGGCG+TGG 0.639755 1.1:+50597467 None:intergenic
CTTTACGAATTCATGTGGCG+AGG 0.642026 1.1:+50597155 None:intergenic
TGTTGATTGAAAAGTCATTG+TGG 0.646814 1.1:+50597281 None:intergenic
AAACTTTGTGGAGTAAAAGA+GGG 0.648448 1.1:+50600273 None:intergenic
GTTTGCAAGAGCAAATTACT+CGG 0.652309 1.1:-50596806 MS.gene038010:CDS
TCTTGCCAAACACCACCTGG+CGG 0.659487 1.1:+50597252 None:intergenic
ACGCCCCAAGTTACAACACG+CGG 0.663681 1.1:+50596922 None:intergenic
CGCCCCAAGTTACAACACGC+GGG 0.670277 1.1:+50596923 None:intergenic
CAAGAAAATACAAATACTGG+AGG 0.676007 1.1:-50597234 MS.gene038010:CDS
AGTCATTGTGGCAATTACAG+TGG 0.700366 1.1:+50597293 None:intergenic
AATTGGATAGAAGAAACAAG+GGG 0.730527 1.1:-50597333 MS.gene038010:CDS
TTCAGCTGAAGGACACACTG+AGG 0.735387 1.1:-50600111 MS.gene038010:CDS
TGACATGAATGTGACAGCGA+CGG 0.741823 1.1:+50597017 None:intergenic
TCAACATTAAGTCCGCCAGG+TGG 0.747812 1.1:-50597264 MS.gene038010:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAATTAATAATAATACTA+AGG - chr1.1:50597638-50597657 MS.gene038010:CDS 10.0%
!! ACAATTAATAATAATACTAA+GGG - chr1.1:50597639-50597658 MS.gene038010:CDS 10.0%
!! AATAATTAATTAAAGATCGT+TGG - chr1.1:50599278-50599297 MS.gene038010:intron 15.0%
!! AGATGATTTAATAATCAATT+AGG + chr1.1:50597743-50597762 None:intergenic 15.0%
!! TATTAATTGTTAGTATTATG+CGG + chr1.1:50597629-50597648 None:intergenic 15.0%
!!! TTAACATTTCTTCAATTTTA+AGG + chr1.1:50599658-50599677 None:intergenic 15.0%
!! ATTAATAATAATACTAAGGG+AGG - chr1.1:50597642-50597661 MS.gene038010:CDS 20.0%
!! GATTTAATAATCAATTAGGA+TGG + chr1.1:50597739-50597758 None:intergenic 20.0%
!! TTAATAATAATACTAAGGGA+GGG - chr1.1:50597643-50597662 MS.gene038010:intron 20.0%
!! TTCTATGTTATTCAAAGATA+AGG - chr1.1:50598059-50598078 MS.gene038010:intron 20.0%
!! TTGGATTAAAACAAAATAGA+GGG - chr1.1:50599297-50599316 MS.gene038010:intron 20.0%
!!! AAAGGGTATATTAGTAATTT+TGG - chr1.1:50599098-50599117 MS.gene038010:intron 20.0%
!!! AACGTAATTTAAGTTTACAT+AGG - chr1.1:50598635-50598654 MS.gene038010:intron 20.0%
!!! AAGGGTATATTAGTAATTTT+GGG - chr1.1:50599099-50599118 MS.gene038010:intron 20.0%
!!! TGATTTAATTTTACGTAGAA+GGG - chr1.1:50598611-50598630 MS.gene038010:intron 20.0%
!!! TTAGAATGATAATGAAAGAA+GGG + chr1.1:50598354-50598373 None:intergenic 20.0%
!!! TTGATTTAATTTTACGTAGA+AGG - chr1.1:50598610-50598629 MS.gene038010:intron 20.0%
!!! TTTAGAATGATAATGAAAGA+AGG + chr1.1:50598355-50598374 None:intergenic 20.0%
!!! TTTTAGAAATTTACATGAAG+AGG + chr1.1:50598330-50598349 None:intergenic 20.0%
! AAACAAAAGACATTGTAGAA+GGG + chr1.1:50597440-50597459 None:intergenic 25.0%
! AAATGAAAGAAGGAAAATGT+GGG - chr1.1:50599790-50599809 MS.gene038010:intron 25.0%
! AATGACCAATGTTAGTATTA+TGG + chr1.1:50599377-50599396 None:intergenic 25.0%
! ACAATAGTCATGAACAAAAT+TGG + chr1.1:50598211-50598230 None:intergenic 25.0%
! AGAAACTTAACGAGTAATTA+TGG - chr1.1:50599419-50599438 MS.gene038010:intron 25.0%
! AGTTAGACTCAAACAAATTA+AGG - chr1.1:50597382-50597401 MS.gene038010:CDS 25.0%
! ATGACCAATGTTAGTATTAT+GGG + chr1.1:50599376-50599395 None:intergenic 25.0%
! ATGGTTGGATTAAAACTAAA+TGG + chr1.1:50597720-50597739 None:intergenic 25.0%
! GAAGAAATGTTAATTGAAGT+CGG - chr1.1:50599665-50599684 MS.gene038010:intron 25.0%
! GATAAGGAGGATAAAATTAT+TGG - chr1.1:50598075-50598094 MS.gene038010:intron 25.0%
! GTTGGATTAAAACAAAATAG+AGG - chr1.1:50599296-50599315 MS.gene038010:intron 25.0%
! TAAACAAAAGACATTGTAGA+AGG + chr1.1:50597441-50597460 None:intergenic 25.0%
! TAATAATCAATTAGGATGGT+TGG + chr1.1:50597735-50597754 None:intergenic 25.0%
! TAATTGGATAGAAGAAACAA+GGG - chr1.1:50599847-50599866 MS.gene038010:CDS 25.0%
! TAGTATATGTCGAACATATA+TGG - chr1.1:50599150-50599169 MS.gene038010:intron 25.0%
! TATGTTATTCAAAGATAAGG+AGG - chr1.1:50598062-50598081 MS.gene038010:intron 25.0%
! TCTTGATTAGAAGATTGATT+TGG + chr1.1:50599764-50599783 None:intergenic 25.0%
! TGAATTGAATAACTCCTTTA+AGG + chr1.1:50597297-50597316 None:intergenic 25.0%
! TGGGTGTAACTAAATTATAT+GGG + chr1.1:50598271-50598290 None:intergenic 25.0%
! TGTGACAATAAGAAAAACTA+AGG + chr1.1:50597514-50597533 None:intergenic 25.0%
! TTGGATTAAAACTAAATGGA+GGG + chr1.1:50597716-50597735 None:intergenic 25.0%
! TTGGGTGTAACTAAATTATA+TGG + chr1.1:50598272-50598291 None:intergenic 25.0%
!! ACTTGCTGAATAATATGATA+AGG + chr1.1:50600223-50600242 None:intergenic 25.0%
!! AGGGTATATTAGTAATTTTG+GGG - chr1.1:50599100-50599119 MS.gene038010:intron 25.0%
!! ATGTAATGGAGTTTCATTAT+AGG + chr1.1:50596943-50596962 None:intergenic 25.0%
!! GATGTTGTTAATTTTACCAT+GGG - chr1.1:50598544-50598563 MS.gene038010:intron 25.0%
!! GATTTAGATTAGTACGATTT+TGG - chr1.1:50597486-50597505 MS.gene038010:CDS 25.0%
!! TGATGTTGTTAATTTTACCA+TGG - chr1.1:50598543-50598562 MS.gene038010:intron 25.0%
!! TGTAATGGAGTTTCATTATA+GGG + chr1.1:50596942-50596961 None:intergenic 25.0%
!! TTTACGTACATATTCTAAAG+AGG - chr1.1:50598674-50598693 MS.gene038010:intron 25.0%
!!! ATTTAATTGGCGATTTTAGT+AGG + chr1.1:50598426-50598445 None:intergenic 25.0%
AAACTTTGTGGAGTAAAAGA+GGG + chr1.1:50596911-50596930 None:intergenic 30.0%
AAATTCTTTGTGGGAATCAA+AGG - chr1.1:50598142-50598161 MS.gene038010:intron 30.0%
AACAAAAGACATTGTAGAAG+GGG + chr1.1:50597439-50597458 None:intergenic 30.0%
AAGAACATCCAAATGAAAGA+AGG - chr1.1:50599780-50599799 MS.gene038010:intron 30.0%
AAGAGAGGAAAAGAAAGAAA+TGG + chr1.1:50600068-50600087 None:intergenic 30.0%
AATTCTTTGTGGGAATCAAA+GGG - chr1.1:50598143-50598162 MS.gene038010:intron 30.0%
AATTGGATAGAAGAAACAAG+GGG - chr1.1:50599848-50599867 MS.gene038010:CDS 30.0%
ACATCATGACCTTATTCTTA+AGG + chr1.1:50600123-50600142 None:intergenic 30.0%
AGAAATCTGAATACGTTGTT+AGG + chr1.1:50599196-50599215 None:intergenic 30.0%
AGCAAATGAAGATGTTTGTT+TGG - chr1.1:50597112-50597131 MS.gene038010:CDS 30.0%
ATATGTCGAACATATATGGA+AGG - chr1.1:50599154-50599173 MS.gene038010:intron 30.0%
ATCATGACCTTATTCTTAAG+GGG + chr1.1:50600121-50600140 None:intergenic 30.0%
ATCTACAATTCCAAGGTAAT+TGG - chr1.1:50599831-50599850 MS.gene038010:CDS 30.0%
ATGAACTTTACGAATTCATG+TGG + chr1.1:50600034-50600053 None:intergenic 30.0%
ATTTAAGGAGTTGCGTAATA+AGG - chr1.1:50597578-50597597 MS.gene038010:CDS 30.0%
CAAATGAAAGAAGGAAAATG+TGG - chr1.1:50599789-50599808 MS.gene038010:intron 30.0%
CAAGAAAATACAAATACTGG+AGG - chr1.1:50599947-50599966 MS.gene038010:CDS 30.0%
CATCATGACCTTATTCTTAA+GGG + chr1.1:50600122-50600141 None:intergenic 30.0%
CTGCAAAAGTAAGTATTCTA+TGG + chr1.1:50599546-50599565 None:intergenic 30.0%
CTTATAAAATCTCTTGACCA+GGG + chr1.1:50599635-50599654 None:intergenic 30.0%
GAAATCTGAATACGTTGTTA+GGG + chr1.1:50599195-50599214 None:intergenic 30.0%
GACAATAGACTCATTACTTA+CGG - chr1.1:50599471-50599490 MS.gene038010:intron 30.0%
GAGTTATTCAATTCAGTAAG+AGG - chr1.1:50597302-50597321 MS.gene038010:CDS 30.0%
GGGTGTAACTAAATTATATG+GGG + chr1.1:50598270-50598289 None:intergenic 30.0%
GTAATTGGATAGAAGAAACA+AGG - chr1.1:50599846-50599865 MS.gene038010:CDS 30.0%
GTTGGATTAAAACTAAATGG+AGG + chr1.1:50597717-50597736 None:intergenic 30.0%
TAACTCAAAAGAGTTACTCT+TGG - chr1.1:50599333-50599352 MS.gene038010:intron 30.0%
TAACTCACAAGAATTACTCT+TGG + chr1.1:50597680-50597699 None:intergenic 30.0%
TAAGAATAAGGTCATGATGT+GGG - chr1.1:50600123-50600142 MS.gene038010:CDS 30.0%
TAAGTCCTCATCTTTAAGTA+TGG - chr1.1:50597536-50597555 MS.gene038010:CDS 30.0%
TGACCAATGTTAGTATTATG+GGG + chr1.1:50599375-50599394 None:intergenic 30.0%
TGGCAAGAAAATACAAATAC+TGG - chr1.1:50599944-50599963 MS.gene038010:CDS 30.0%
TGTTGACCCAAAAAACAAAA+CGG + chr1.1:50600318-50600337 None:intergenic 30.0%
TTAAGAATAAGGTCATGATG+TGG - chr1.1:50600122-50600141 MS.gene038010:CDS 30.0%
TTTCTTCTATCCAATTACCT+TGG + chr1.1:50599844-50599863 None:intergenic 30.0%
TTTGATTCCCACAAAGAATT+TGG + chr1.1:50598143-50598162 None:intergenic 30.0%
! ATGCAAAATTCTAGTTGAAG+AGG + chr1.1:50597997-50598016 None:intergenic 30.0%
! ATTGTTTCTTAAGATTTGCC+TGG + chr1.1:50597833-50597852 None:intergenic 30.0%
! ATTTCTTTCTTTTCCTCTCT+TGG - chr1.1:50600067-50600086 MS.gene038010:CDS 30.0%
! CACATTTTCCTTCTTTCATT+TGG + chr1.1:50599791-50599810 None:intergenic 30.0%
! CTGCTTTCTAAAAACAAAGA+GGG - chr1.1:50597338-50597357 MS.gene038010:CDS 30.0%
! GGAAAATGTGGGAAAAATTT+TGG - chr1.1:50599801-50599820 MS.gene038010:CDS 30.0%
! TAACTTGTGCAGTTTGAATT+TGG + chr1.1:50600347-50600366 None:intergenic 30.0%
! TGTTGATTGAAAAGTCATTG+TGG + chr1.1:50599903-50599922 None:intergenic 30.0%
! TTACATGAAGAGGACAATTT+TGG + chr1.1:50598320-50598339 None:intergenic 30.0%
! TTGTTTCTTAAGATTTGCCT+GGG + chr1.1:50597832-50597851 None:intergenic 30.0%
!! GGAAGAGATGTTGATTTAAT+TGG + chr1.1:50598439-50598458 None:intergenic 30.0%
!! TTGATTTGGTTGTTCTTGAT+TGG + chr1.1:50599750-50599769 None:intergenic 30.0%
AATGTTAGTATTATGGGGGA+GGG + chr1.1:50599370-50599389 None:intergenic 35.0%
ACAATAACGATAAACACCCA+TGG + chr1.1:50598563-50598582 None:intergenic 35.0%
ACCTTGGAATTGTAGATACT+TGG + chr1.1:50599828-50599847 None:intergenic 35.0%
AGAAGAGAGGCTATATGTAA+TGG + chr1.1:50596957-50596976 None:intergenic 35.0%
ATGAATCGAGTACGTATCAA+TGG + chr1.1:50598460-50598479 None:intergenic 35.0%
ATGGAGTCCAAATTCTTTGT+GGG - chr1.1:50598133-50598152 MS.gene038010:intron 35.0%
ATTCACGTTGTGAATGATGA+TGG - chr1.1:50597230-50597249 MS.gene038010:CDS 35.0%
CAAAATAGAGGGATGTGATT+TGG - chr1.1:50599308-50599327 MS.gene038010:intron 35.0%
CTCTACAATGCATCACTAAA+CGG - chr1.1:50596849-50596868 MS.gene038010:CDS 35.0%
GAAACTTTGTGGAGTAAAAG+AGG + chr1.1:50596912-50596931 None:intergenic 35.0%
GACCAATGTTAGTATTATGG+GGG + chr1.1:50599374-50599393 None:intergenic 35.0%
GCTTATAAAATCTCTTGACC+AGG + chr1.1:50599636-50599655 None:intergenic 35.0%
GGGTGTAACTTGGATTATTT+GGG - chr1.1:50599120-50599139 MS.gene038010:intron 35.0%
GGTGTAACTTGGATTATTTG+GGG - chr1.1:50599121-50599140 MS.gene038010:intron 35.0%
GTTTGCAAGAGCAAATTACT+CGG - chr1.1:50600375-50600394 MS.gene038010:CDS 35.0%
TATGGAGTCCAAATTCTTTG+TGG - chr1.1:50598132-50598151 MS.gene038010:intron 35.0%
TCATGACCTTATTCTTAAGG+GGG + chr1.1:50600120-50600139 None:intergenic 35.0%
TCCAAGTATCTACAATTCCA+AGG - chr1.1:50599824-50599843 MS.gene038010:CDS 35.0%
TGTGTCATCTTCTAGATTTG+CGG + chr1.1:50596820-50596839 None:intergenic 35.0%
TTACATATAGCCTCTCTTCT+TGG - chr1.1:50596957-50596976 MS.gene038010:CDS 35.0%
TTGCACATGTGTATTTGGTA+TGG - chr1.1:50597260-50597279 MS.gene038010:CDS 35.0%
TTTGCATTTAGCTGCGAAAA+GGG - chr1.1:50597160-50597179 MS.gene038010:CDS 35.0%
! AAATTCTAGTTGAAGAGGTG+AGG + chr1.1:50597992-50598011 None:intergenic 35.0%
! ATTGCTGCTGTTCTTATTTC+AGG + chr1.1:50599569-50599588 None:intergenic 35.0%
! CCTGCTTTCTAAAAACAAAG+AGG - chr1.1:50597337-50597356 MS.gene038010:CDS 35.0%
! CGAAAGTCGCTAGATTTTTA+TGG - chr1.1:50598114-50598133 MS.gene038010:intron 35.0%
! CTGTTTTGCACATGTGTATT+TGG - chr1.1:50597255-50597274 MS.gene038010:CDS 35.0%
! TATTGATTGCATATCCATGG+TGG + chr1.1:50598403-50598422 None:intergenic 35.0%
!! AGGTATTGATTGCATATCCA+TGG + chr1.1:50598406-50598425 None:intergenic 35.0%
!! ATCTTTAAGTATGGCTTGGT+GGG - chr1.1:50597545-50597564 MS.gene038010:CDS 35.0%
!! TATTTGGTATGGCCATTTTG+AGG - chr1.1:50597271-50597290 MS.gene038010:CDS 35.0%
!! TTTTAGAAAGCAGGAACTCT+TGG + chr1.1:50597331-50597350 None:intergenic 35.0%
!!! ACACACTCCGTTTTGTTTTT+TGG - chr1.1:50600308-50600327 MS.gene038010:CDS 35.0%
!!! AGTAATTTTGGGGTGTAACT+TGG - chr1.1:50599110-50599129 MS.gene038010:intron 35.0%
!!! CACACTCCGTTTTGTTTTTT+GGG - chr1.1:50600309-50600328 MS.gene038010:CDS 35.0%
!!! CCTCTTTGTTTTTAGAAAGC+AGG + chr1.1:50597340-50597359 None:intergenic 35.0%
ACCAAGTTTCACCAATGAAG+TGG - chr1.1:50597016-50597035 MS.gene038010:CDS 40.0%
ACTTATGGTGTATGTGAAGC+AGG - chr1.1:50599983-50600002 MS.gene038010:CDS 40.0%
AGTCATTGTGGCAATTACAG+TGG + chr1.1:50599891-50599910 None:intergenic 40.0%
CAATGTTAGTATTATGGGGG+AGG + chr1.1:50599371-50599390 None:intergenic 40.0%
CAGCTGAAGCTAAATGAAGA+GGG + chr1.1:50597058-50597077 None:intergenic 40.0%
CCAAGCCATACTTAAAGATG+AGG + chr1.1:50597544-50597563 None:intergenic 40.0%
CCTCATCTTTAAGTATGGCT+TGG - chr1.1:50597541-50597560 MS.gene038010:CDS 40.0%
CTAAATGGAGGGATGTGATT+TGG + chr1.1:50597705-50597724 None:intergenic 40.0%
CTCCCCCATAATACTAACAT+TGG - chr1.1:50599369-50599388 MS.gene038010:intron 40.0%
CTTTGCATTTAGCTGCGAAA+AGG - chr1.1:50597159-50597178 MS.gene038010:CDS 40.0%
GAACATATATGGAAGGATCG+AGG - chr1.1:50599161-50599180 MS.gene038010:intron 40.0%
GAGATGGTTGGGTATAAATG+TGG + chr1.1:50597968-50597987 None:intergenic 40.0%
GAGTAATTATGGCAACTCTG+AGG - chr1.1:50599430-50599449 MS.gene038010:intron 40.0%
GGACTCAATTGCACTACTTA+TGG - chr1.1:50599968-50599987 MS.gene038010:CDS 40.0%
GGCGTGGAATTCATATATAC+TGG + chr1.1:50599701-50599720 None:intergenic 40.0%
GGGGTGTAACTTGGATTATT+TGG - chr1.1:50599119-50599138 MS.gene038010:intron 40.0%
GTTGTGCTTCTCCTTATTAG+TGG - chr1.1:50600091-50600110 MS.gene038010:CDS 40.0%
TAAGGGGGAATCCACTAATA+AGG + chr1.1:50600105-50600124 None:intergenic 40.0%
TCAGCTGAAGCTAAATGAAG+AGG + chr1.1:50597059-50597078 None:intergenic 40.0%
TCCACTTCATTGGTGAAACT+TGG + chr1.1:50597020-50597039 None:intergenic 40.0%
TGGATTCCCCCTTAAGAATA+AGG - chr1.1:50600111-50600130 MS.gene038010:CDS 40.0%
TTCACAACGTGAATCGAATC+TGG + chr1.1:50597224-50597243 None:intergenic 40.0%
TTCTAAGTGTCCAAGAAGAG+AGG + chr1.1:50596970-50596989 None:intergenic 40.0%
TTGCATTTAGCTGCGAAAAG+GGG - chr1.1:50597161-50597180 MS.gene038010:CDS 40.0%
TTTCTTAAGATTTGCCTGGG+AGG + chr1.1:50597829-50597848 None:intergenic 40.0%
! AACTTGGATTATTTGGGGTG+TGG - chr1.1:50599126-50599145 MS.gene038010:intron 40.0%
! ACCAATGAAGTGGACTCAAA+AGG - chr1.1:50597026-50597045 MS.gene038010:CDS 40.0%
! ACTTGGATTATTTGGGGTGT+GGG - chr1.1:50599127-50599146 MS.gene038010:intron 40.0%
! CATCTTTAAGTATGGCTTGG+TGG - chr1.1:50597544-50597563 MS.gene038010:CDS 40.0%
! CTTCATTTAGCTTCAGCTGA+AGG - chr1.1:50597059-50597078 MS.gene038010:CDS 40.0%
! CTTTTCGCAGCTAAATGCAA+AGG + chr1.1:50597161-50597180 None:intergenic 40.0%
! GTGGTTTGTGGGTGAAAAAT+GGG + chr1.1:50598384-50598403 None:intergenic 40.0%
!! ACTCCTTTAAGGCCTCAAAA+TGG + chr1.1:50597286-50597305 None:intergenic 40.0%
!! CGAGACTTTTTCTACGCATA+CGG + chr1.1:50597799-50597818 None:intergenic 40.0%
!! GGCGTTTTGCTTTTAGTTGT+TGG - chr1.1:50600277-50600296 MS.gene038010:CDS 40.0%
!! TCCTTTTGAGTCCACTTCAT+TGG + chr1.1:50597030-50597049 None:intergenic 40.0%
!! TCTTTAAGTATGGCTTGGTG+GGG - chr1.1:50597546-50597565 MS.gene038010:CDS 40.0%
AGGGAGAGAGTGAAACTTTG+TGG + chr1.1:50596923-50596942 None:intergenic 45.0%
CAATCAACATTAAGTCCGCC+AGG - chr1.1:50599914-50599933 MS.gene038010:CDS 45.0%
CAGCAGCAATTGCTATGAAC+AGG - chr1.1:50599579-50599598 MS.gene038010:intron 45.0%
CTTTACGAATTCATGTGGCG+AGG + chr1.1:50600029-50600048 None:intergenic 45.0%
CTTTGTGATGCTGCATGTTG+CGG + chr1.1:50599722-50599741 None:intergenic 45.0%
GCAACAAGGAAGTGATGTAG+AGG - chr1.1:50599226-50599245 MS.gene038010:intron 45.0%
GCAATTGCTATGAACAGGTC+AGG - chr1.1:50599584-50599603 MS.gene038010:intron 45.0%
TGACATGAATGTGACAGCGA+CGG + chr1.1:50600167-50600186 None:intergenic 45.0%
TGCATATCCATGGTGGTTTG+TGG + chr1.1:50598396-50598415 None:intergenic 45.0%
TGCATTTAGCTGCGAAAAGG+GGG - chr1.1:50597162-50597181 MS.gene038010:CDS 45.0%
TGTGGGTGAAAAATGGGTGA+GGG + chr1.1:50598378-50598397 None:intergenic 45.0%
TTACCCGCGTGTTGTAACTT+GGG - chr1.1:50600255-50600274 MS.gene038010:CDS 45.0%
TTCTTAGTGACGCAGCAACA+AGG - chr1.1:50599212-50599231 MS.gene038010:intron 45.0%
TTGTGGGTGAAAAATGGGTG+AGG + chr1.1:50598379-50598398 None:intergenic 45.0%
! GCATATCCATGGTGGTTTGT+GGG + chr1.1:50598395-50598414 None:intergenic 45.0%
! GGTGGTTTGTGGGTGAAAAA+TGG + chr1.1:50598385-50598404 None:intergenic 45.0%
! TTTTCACCCACAAACCACCA+TGG - chr1.1:50598386-50598405 MS.gene038010:intron 45.0%
! TTTTCTTGCCAAACACCACC+TGG + chr1.1:50599935-50599954 None:intergenic 45.0%
!! AACAAGGGGAGCATTGATGT+TGG - chr1.1:50599862-50599881 MS.gene038010:CDS 45.0%
!!! TGGCCATTTTGAGGCCTTAA+AGG - chr1.1:50597280-50597299 MS.gene038010:CDS 45.0%
!!! AAATAGTTTATTTTAATTAA+AGG - chr1.1:50599080-50599099 MS.gene038010:intron 5.0%
!!! AATAGTTTATTTTAATTAAA+GGG - chr1.1:50599081-50599100 MS.gene038010:intron 5.0%
!!! GTAAAATTTTAAATAAATTT+GGG + chr1.1:50598290-50598309 None:intergenic 5.0%
!!! TGTAAAATTTTAAATAAATT+TGG + chr1.1:50598291-50598310 None:intergenic 5.0%
AAGAGGTGAGGTGAGATGGT+TGG + chr1.1:50597980-50597999 None:intergenic 50.0%
AGAGGTGAGGTGAGATGGTT+GGG + chr1.1:50597979-50597998 None:intergenic 50.0%
CAGGTCAGGCTTCACAACTT+TGG - chr1.1:50599598-50599617 MS.gene038010:intron 50.0%
GTCAGGCTTCACAACTTTGG+AGG - chr1.1:50599601-50599620 MS.gene038010:intron 50.0%
GTGGGGTGTGGGAGAATTTA+AGG - chr1.1:50597563-50597582 MS.gene038010:CDS 50.0%
GTTACCCGCGTGTTGTAACT+TGG - chr1.1:50600254-50600273 MS.gene038010:CDS 50.0%
GTTGAAGAGGTGAGGTGAGA+TGG + chr1.1:50597984-50598003 None:intergenic 50.0%
TACCCGCGTGTTGTAACTTG+GGG - chr1.1:50600256-50600275 MS.gene038010:CDS 50.0%
TCAACATTAAGTCCGCCAGG+TGG - chr1.1:50599917-50599936 MS.gene038010:CDS 50.0%
TTCAGCTGAAGGACACACTG+AGG - chr1.1:50597070-50597089 MS.gene038010:CDS 50.0%
! CTTTTTCTACGCATACGGCG+AGG + chr1.1:50597794-50597813 None:intergenic 50.0%
! GAGAAGCACAACACCAAGAG+AGG + chr1.1:50600083-50600102 None:intergenic 50.0%
!! AAGGGGAGCATTGATGTTGG+TGG - chr1.1:50599865-50599884 MS.gene038010:CDS 50.0%
!! CTTTGGAGGTGTTAGATCCC+TGG - chr1.1:50599615-50599634 MS.gene038010:intron 50.0%
ACGCCCCAAGTTACAACACG+CGG + chr1.1:50600262-50600281 None:intergenic 55.0%
ACTCACGTACGCGTTTGCTC+TGG - chr1.1:50600186-50600205 MS.gene038010:CDS 55.0%
AGCTGAAGGACACACTGAGG+TGG - chr1.1:50597073-50597092 MS.gene038010:CDS 55.0%
AGTCTCGTCTTCTTCCTCCC+AGG - chr1.1:50597812-50597831 MS.gene038010:intron 55.0%
CTCACGTACGCGTTTGCTCT+GGG - chr1.1:50600187-50600206 MS.gene038010:CDS 55.0%
TAAGTCCGCCAGGTGGTGTT+TGG - chr1.1:50599924-50599943 MS.gene038010:CDS 55.0%
TCTTGCCAAACACCACCTGG+CGG + chr1.1:50599932-50599951 None:intergenic 55.0%
! GTACGCGTTTGCTCTGGGTT+TGG - chr1.1:50600192-50600211 MS.gene038010:CDS 55.0%
!! AAGTATGGCTTGGTGGGGTG+TGG - chr1.1:50597551-50597570 MS.gene038010:CDS 55.0%
!! AGTATGGCTTGGTGGGGTGT+GGG - chr1.1:50597552-50597571 MS.gene038010:CDS 55.0%
CGCCCCAAGTTACAACACGC+GGG + chr1.1:50600261-50600280 None:intergenic 60.0%
GCTGCGAAAAGGGGGCGAAT+AGG - chr1.1:50597170-50597189 MS.gene038010:CDS 60.0%
TGATGCTGCATGTTGCGGCG+TGG + chr1.1:50599717-50599736 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 50596798 50600405 50596798 ID=MS.gene038010
chr1.1 mRNA 50596798 50600405 50596798 ID=MS.gene038010.t1;Parent=MS.gene038010
chr1.1 exon 50599800 50600405 50599800 ID=MS.gene038010.t1.exon1;Parent=MS.gene038010.t1
chr1.1 CDS 50599800 50600405 50599800 ID=cds.MS.gene038010.t1;Parent=MS.gene038010.t1
chr1.1 exon 50596798 50597661 50596798 ID=MS.gene038010.t1.exon2;Parent=MS.gene038010.t1
chr1.1 CDS 50596798 50597661 50596798 ID=cds.MS.gene038010.t1;Parent=MS.gene038010.t1
Gene Sequence

>MS.gene038010

ATGGAGACAAAAATAAATACCGCAAATCTAGAAGATGACACAATAAAAACACTCTACAATGCATCACTAAACGGTTGTGTAACTACTTTAAACACACTCATTCAAAACGACCCTCTTTTACTCCACAAAGTTTCACTCTCTCCCTATAATGAAACTCCATTACATATAGCCTCTCTTCTTGGACACTTAGAATTTTGTGAAATTCTTCTAAAAAACAAACCAAGTTTCACCAATGAAGTGGACTCAAAAGGACGTTGCCCTCTTCATTTAGCTTCAGCTGAAGGACACACTGAGGTGGTGAAAGCTCTTTTGATAGCAAATGAAGATGTTTGTTTGGTTTTTGACAAAGATGATATGATTCCTTTGCATTTAGCTGCGAAAAGGGGGCGAATAGGAGTAATTAAAGAGTTGATTAAAGCTAGACCAGATTCGATTCACGTTGTGAATGATGATGGTTCTGTTTTGCACATGTGTATTTGGTATGGCCATTTTGAGGCCTTAAAGGAGTTATTCAATTCAGTAAGAGGAGACCAAGAGTTCCTGCTTTCTAAAAACAAAGAGGGCAATACAATTCTGCACTTAGCAGTTAGACTCAAACAAATTAAGGTACTACTTAACAATTTTTAAAGTAATGTAATCCCCTTCTACAATGTCTTTTGTTTAGATTTAATTACACTTTAAATTTTCTGATTTAGATTAGTACGATTTTGGTTCCTTAGTTTTTCTTATTGTCACACTTAAGTCCTCATCTTTAAGTATGGCTTGGTGGGGTGTGGGAGAATTTAAGGAGTTGCGTAATAAGGAGATCAAGAGTTCGATCTTCACTCTCCGCATAATACTAACAATTAATAATAATACTAAGGGAGGGATATTTTGACTCCAAGAGTAATTCTTGTGAGTTACTCCAAATCACATCCCTCCATTTAGTTTTAATCCAACCATCCTAATTGATTATTAAATCATCTCTAATGATCAAGTAGTACTAAATCATTGCCTCGCCGTATGCGTAGAAAAAGTCTCGTCTTCTTCCTCCCAGGCAAATCTTAAGAAACAATGATTTGAATATGAATTAATTAAATTCATTGATCATTGATAAGTTCAGTTTTTTTTCTGATAAATTTCACATCTTTGTTTTTATGCTGCGAAAATTATGAATTACAGTGTTTGCCACATTTATACCCAACCATCTCACCTCACCTCTTCAACTAGAATTTTGCATAATAATTTAAATTTGAGAATTCTATTTCTTCAAATTTGAGAATTCTATGTTATTCAAAGATAAGGAGGATAAAATTATTGGAATCTAAAAATAATGTCGAAAGTCGCTAGATTTTTATGGAGTCCAAATTCTTTGTGGGAATCAAAGGGCATAAAATAGAGATCATGTAGACATAGAATTGAAATCGAAAGCCAATTTTGTTCATGACTATTGTTAATCTTTGAGAACATATAGACTCTTTCTAGTCTCGCCCCATATAATTTAGTTACACCCAAATTTATTTAAAATTTTACAATAATACCAAAATTGTCCTCTTCATGTAAATTTCTAAAAACCCTTCTTTCATTATCATTCTAAACCCTCACCCATTTTTCACCCACAAACCACCATGGATATGCAATCAATACCTACTAAAATCGCCAATTAAATCAACATCTCTTCCATTGATACGTACTCGATTCATACAAGTAAGTGAATTTCATAAATTTCTTCGAGTTTCTATTTATCGTTTGCTCTATGATTTATTTGATGTTGTTAATTTTACCATGGGTGTTTATCGTTATTGTTAATTTCACGTTTGTCTGTCGATTTGTTTGATTTAATTTTACGTAGAAGGGTAACGTAATTTAAGTTTACATAGGTCTCACGTGAATTTAGTTTACGTACATATTCTAAAGAGGAATAACATACACGTAAACTCAGTTTACATGAACTTAAGTAAACTCAGTTTACATGAACTTAAGTAAACTCAGTTTACATAAACTGTGTAAACTACGTTAGTTTACTTAACTTGTTGTAAACTTAGTTTACATAGTGTATGTAAACTCAGTTTACATAAACTACGTAAACTTAGTTTACATAAACTGTGTAAACTAAGTTTTCGTAGTGTATGTAAATTCAGTTTACATAAACTACGTAAACTCAGTTTACATAAACTGTGTAAAATCAGTTTACGTTAGTTTACTTAACTTATGTAAACTCAGTTTACATAAACTACGTAAACTTAGTTTACATAAACTGTGTAAACTCAGTTTACGTAGTGTATGTAAACTCAGTTTACATAAAATAGTTTATTTTAATTAAAGGGTATATTAGTAATTTTGGGGTGTAACTTGGATTATTTGGGGTGTGGGTAGTATATGTCGAACATATATGGAAGGATCGAGGAAAAAATACCCTAACAACGTATTCAGATTTCTTAGTGACGCAGCAACAAGGAAGTGATGTAGAGGATAATAGTGTGTGATCATGAAGATGATTTAATAATTAATTAAAGATCGTTGGATTAAAACAAAATAGAGGGATGTGATTTGGAGTAACTCAAAAGAGTTACTCTTGGAGTCAAAATATCCCTCCCCCATAATACTAACATTGGTCATTTCAAAACAAAAAAAAAAAATTGAGAAACTTAACGAGTAATTATGGCAACTCTGAGGTTTAAGTAATTCATTCTAGACAATAGACTCATTACTTACGGCGTGTGCTAGTGATTTTCTTTTCAATAACTTTGTTAATTTGTTTGCAGACCATAGAATACTTACTTTTGCAGCCTGAAATAAGAACAGCAGCAATTGCTATGAACAGGTCAGGCTTCACAACTTTGGAGGTGTTAGATCCCTGGTCAAGAGATTTTATAAGCCTTAAAATTGAAGAAATGTTAATTGAAGTCGGTGTTCTAAGACCAGTATATATGAATTCCACGCCGCAACATGCAGCATCACAAAGCATAGCCAATCAAGAACAACCAAATCAATCTTCTAATCAAGAACATCCAAATGAAAGAAGGAAAATGTGGGAAAAATTTTGGTCCAAGTATCTACAATTCCAAGGTAATTGGATAGAAGAAACAAGGGGAGCATTGATGTTGGTGGCCACTGTAATTGCCACAATGACTTTTCAATCAACATTAAGTCCGCCAGGTGGTGTTTGGCAAGAAAATACAAATACTGGAGGACTCAATTGCACTACTTATGGTGTATGTGAAGCAGGCACTGCAGTTTTAGCTTATGCCTCGCCACATGAATTCGTAAAGTTCATGACATACAACACCATTTCTTTCTTTTCCTCTCTTGGTGTTGTGCTTCTCCTTATTAGTGGATTCCCCCTTAAGAATAAGGTCATGATGTGGGTCTTGACATTCGCTATGACCGTCGCTGTCACATTCATGTCACTCACGTACGCGTTTGCTCTGGGTTTGGTCGCTCCTTATCATATTATTCAGCAAGTTTACAACATGCGTTACCCGCGTGTTGTAACTTGGGGCGTTTTGCTTTTAGTTGTTGGTTTGATTCACACACTCCGTTTTGTTTTTTGGGTCAACAAGATAACCAAATTCAAACTGCACAAGTTAAGACGTGTGTTTGCAAGAGCAAATTACTCGGATGTTTAG
Protein sequence

>MS.gene038010.t1

METKINTANLEDDTIKTLYNASLNGCVTTLNTLIQNDPLLLHKVSLSPYNETPLHIASLLGHLEFCEILLKNKPSFTNEVDSKGRCPLHLASAEGHTEVVKALLIANEDVCLVFDKDDMIPLHLAAKRGRIGVIKELIKARPDSIHVVNDDGSVLHMCIWYGHFEALKELFNSVRGDQEFLLSKNKEGNTILHLAVRLKQIKTIEYLLLQPEIRTAAIAMNRSGFTTLEVLDPWSRDFISLKIEEMLIEVGVLRPVYMNSTPQHAASQSIANQEQPNQSSNQEHPNERRKMWEKFWSKYLQFQGNWIEETRGALMLVATVIATMTFQSTLSPPGGVWQENTNTGGLNCTTYGVCEAGTAVLAYASPHEFVKFMTYNTISFFSSLGVVLLLISGFPLKNKVMMWVLTFAMTVAVTFMSLTYAFALGLVAPYHIIQQVYNMRYPRVVTWGVLLLVVGLIHTLRFVFWVNKITKFKLHKLRRVFARANYSDV