AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene038083


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038083.t1 MTR_1g069720 97.577 454 5 1 1 448 1 454 0.0 919
MS.gene038083.t1 MTR_7g097160 78.065 465 83 7 1 448 1 463 0.0 726
MS.gene038083.t1 MTR_1g075870 71.304 460 115 6 1 446 2 458 0.0 641
MS.gene038083.t1 MTR_1g042280 71.145 454 120 5 1 446 2 452 0.0 632
MS.gene038083.t1 MTR_1g075870 84.098 327 51 1 1 327 2 327 0.0 585
MS.gene038083.t1 MTR_2g099670 65.358 433 114 8 1 425 1 405 0.0 551
MS.gene038083.t1 MTR_4g126010 72.222 360 87 4 1 347 1 360 0.0 545
MS.gene038083.t1 MTR_8g018310 59.958 472 154 10 1 444 1 465 0.0 540
MS.gene038083.t1 MTR_8g018310 79.167 312 64 1 1 312 1 311 0.0 533
MS.gene038083.t1 MTR_2g039930 55.274 474 176 6 1 447 1 465 0.0 516
MS.gene038083.t1 MTR_0492s0030 68.011 372 110 4 1 370 1 365 0.0 515
MS.gene038083.t1 MTR_0543s0020 68.011 372 110 4 1 370 1 365 0.0 515
MS.gene038083.t1 MTR_1g042280 89.474 266 28 0 40 305 9 274 0.0 513
MS.gene038083.t1 MTR_6g087070 76.797 306 71 0 1 306 1 306 3.19e-179 508
MS.gene038083.t1 MTR_8g102930 77.181 298 68 0 1 298 1 298 3.98e-177 502
MS.gene038083.t1 MTR_1g075870 81.295 278 50 2 57 334 1 276 2.24e-171 482
MS.gene038083.t1 MTR_3g110180 55.582 421 171 4 1 417 1 409 3.88e-164 469
MS.gene038083.t1 MTR_3g110180 55.582 421 170 5 1 417 1 408 1.24e-162 466
MS.gene038083.t1 MTR_1g004990 70.508 295 87 0 1 295 1 295 1.71e-162 465
MS.gene038083.t1 MTR_2g099670 63.441 372 100 8 62 425 10 353 1.26e-157 452
MS.gene038083.t1 MTR_7g097160 71.118 322 74 7 144 448 25 344 4.31e-154 441
MS.gene038083.t1 MTR_2g039930 52.926 393 149 6 82 447 1 384 4.22e-136 397
MS.gene038083.t1 MTR_7g006030 37.716 289 161 6 5 277 31 316 1.21e-57 200
MS.gene038083.t1 MTR_3g110240 37.276 279 162 6 5 273 115 390 2.96e-54 192
MS.gene038083.t1 MTR_7g085540 36.525 282 163 5 9 277 147 425 4.43e-54 192
MS.gene038083.t1 MTR_1g007150 36.918 279 163 6 5 273 118 393 4.95e-54 191
MS.gene038083.t1 MTR_1g116210 36.268 284 167 6 5 277 113 393 1.45e-53 190
MS.gene038083.t1 MTR_8g014050 36.170 282 158 7 9 273 128 404 1.26e-49 179
MS.gene038083.t1 MTR_7g116400 62.687 67 24 1 80 145 1 67 9.55e-21 86.7
MS.gene038083.t1 MTR_7g106710 29.167 216 131 9 9 215 135 337 2.98e-14 74.7
MS.gene038083.t1 MTR_5g007590 45.333 75 33 1 71 145 53 119 3.62e-14 69.7
MS.gene038083.t1 MTR_5g022030 26.818 220 144 6 8 219 98 308 4.06e-14 74.7
MS.gene038083.t1 MTR_5g022030 26.818 220 144 6 8 219 98 308 4.77e-14 74.7
MS.gene038083.t1 MTR_7g106710 29.167 216 131 9 9 215 135 337 6.77e-14 73.9
MS.gene038083.t1 MTR_7g106710 29.167 216 131 9 9 215 135 337 7.40e-14 73.9
MS.gene038083.t1 MTR_4g128820 29.630 216 128 7 7 213 8 208 8.37e-14 73.6
MS.gene038083.t1 MTR_7g106710 29.167 216 131 9 9 215 135 337 1.19e-13 73.6
MS.gene038083.t1 MTR_3g466480 29.817 218 133 9 5 214 17 222 1.11e-12 70.1
MS.gene038083.t1 MTR_7g073520 34.375 128 70 4 109 236 252 365 2.51e-12 68.9
MS.gene038083.t1 MTR_1g026190 28.030 264 151 10 9 251 78 323 3.90e-12 68.6
MS.gene038083.t1 MTR_5g092815 26.609 233 148 8 9 233 91 308 9.31e-12 67.0
MS.gene038083.t1 MTR_7g106730 26.522 230 142 8 9 228 88 300 9.41e-12 67.0
MS.gene038083.t1 MTR_3g099920 28.017 232 107 9 9 213 19 217 3.30e-11 65.5
MS.gene038083.t1 MTR_5g092810 27.488 211 137 6 9 213 92 292 3.68e-11 65.5
MS.gene038083.t1 MTR_8g079790 27.948 229 139 10 6 219 122 339 4.06e-11 65.5
MS.gene038083.t1 MTR_1g098300 28.302 212 127 9 9 209 126 323 4.53e-11 65.5
MS.gene038083.t1 MTR_4g132860 25.887 282 179 10 11 281 82 344 6.35e-11 64.3
MS.gene038083.t1 MTR_8g099095 29.437 231 134 11 9 228 66 278 8.95e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038083.t1 AT4G28540 72.594 478 98 11 1 448 5 479 0.0 679
MS.gene038083.t1 AT4G14340 70.861 453 116 7 1 446 7 450 0.0 642
MS.gene038083.t1 AT3G23340 71.938 449 110 7 1 446 1 436 0.0 642
MS.gene038083.t1 AT1G03930 68.354 474 121 8 1 448 1 471 0.0 626
MS.gene038083.t1 AT5G43320 67.579 475 124 7 1 446 1 474 0.0 625
MS.gene038083.t1 AT3G23340 69.265 449 108 8 1 446 1 422 0.0 608
MS.gene038083.t1 AT1G04440 66.164 464 137 8 1 446 1 462 0.0 599
MS.gene038083.t1 AT5G44100 82.000 350 58 2 1 346 1 349 0.0 597
MS.gene038083.t1 AT5G44100 82.000 350 58 2 1 346 1 349 0.0 597
MS.gene038083.t1 AT4G14340 83.537 328 53 1 1 328 7 333 0.0 576
MS.gene038083.t1 AT5G43320 81.024 332 60 1 1 329 1 332 0.0 565
MS.gene038083.t1 AT5G43320 81.024 332 60 1 1 329 1 332 0.0 565
MS.gene038083.t1 AT1G72710 75.152 330 79 2 1 328 1 329 0.0 536
MS.gene038083.t1 AT4G26100 80.872 298 57 0 1 298 1 298 0.0 535
MS.gene038083.t1 AT5G57015 80.537 298 58 0 1 298 1 298 0.0 529
MS.gene038083.t1 AT2G19470 73.556 329 84 3 1 326 1 329 0.0 524
MS.gene038083.t1 AT4G28880 71.160 319 92 0 1 319 1 319 7.36e-176 499
MS.gene038083.t1 AT4G28880 71.160 319 92 0 1 319 1 319 7.36e-176 499
MS.gene038083.t1 AT4G28880 71.160 319 92 0 1 319 1 319 7.36e-176 499
MS.gene038083.t1 AT4G28880 71.160 319 92 0 1 319 1 319 7.36e-176 499
MS.gene038083.t1 AT4G28860 70.533 319 94 0 1 319 1 319 1.04e-174 494
MS.gene038083.t1 AT4G28860 74.832 298 75 0 1 298 1 298 1.94e-174 495
MS.gene038083.t1 AT4G08800 66.216 296 68 2 1 296 1 264 3.59e-145 416
MS.gene038083.t1 AT2G25760 39.286 280 155 4 9 273 107 386 7.13e-59 204
MS.gene038083.t1 AT2G25760 38.929 280 153 5 9 273 107 383 3.77e-56 197
MS.gene038083.t1 AT3G13670 35.986 289 166 6 5 277 131 416 3.59e-53 189
MS.gene038083.t1 AT5G18190 35.461 282 166 5 9 277 130 408 1.80e-52 187
MS.gene038083.t1 AT5G18190 35.461 282 166 5 9 277 130 408 1.80e-52 187
MS.gene038083.t1 AT3G03940 35.461 282 166 5 9 277 140 418 4.55e-52 186
MS.gene038083.t1 AT3G50530 28.319 226 141 7 5 219 144 359 1.09e-13 73.6
MS.gene038083.t1 AT5G21326 29.870 231 113 10 7 214 11 215 3.36e-13 71.6
MS.gene038083.t1 AT3G20410 28.384 229 143 8 9 230 91 305 5.44e-12 68.2
MS.gene038083.t1 AT3G20410 28.384 229 143 8 9 230 91 305 5.44e-12 68.2
MS.gene038083.t1 AT2G17890 25.909 220 146 7 8 219 107 317 5.73e-12 68.2
MS.gene038083.t1 AT1G30270 27.386 241 147 10 7 236 29 252 6.30e-12 67.8
MS.gene038083.t1 AT1G30270 27.386 241 147 10 7 236 29 252 6.46e-12 67.8
MS.gene038083.t1 AT2G38910 28.063 253 144 10 1 230 119 356 1.06e-11 67.4
MS.gene038083.t1 AT3G50530 26.104 249 148 9 5 219 144 390 1.41e-11 67.0
MS.gene038083.t1 AT4G36070 25.000 220 148 6 8 219 70 280 1.47e-11 67.0
MS.gene038083.t1 AT4G36070 25.000 220 148 6 8 219 70 280 1.79e-11 66.6
MS.gene038083.t1 AT3G61960 24.843 318 204 10 7 318 8 296 1.88e-11 66.6
MS.gene038083.t1 AT3G61960 24.843 318 204 10 7 318 8 296 2.01e-11 66.6
MS.gene038083.t1 AT4G31170 28.319 226 128 8 8 218 130 336 2.84e-11 65.5
MS.gene038083.t1 AT4G31170 28.319 226 128 8 8 218 130 336 2.84e-11 65.5
MS.gene038083.t1 AT4G31170 28.319 226 128 8 8 218 130 336 2.84e-11 65.5
MS.gene038083.t1 AT4G31170 28.319 226 128 8 8 218 130 336 2.84e-11 65.5
MS.gene038083.t1 AT4G31170 28.319 226 128 8 8 218 130 336 2.84e-11 65.5
MS.gene038083.t1 AT4G31170 28.319 226 128 8 8 218 130 336 2.84e-11 65.5
MS.gene038083.t1 AT4G31170 28.319 226 128 8 8 218 130 336 2.84e-11 65.5
MS.gene038083.t1 AT1G29230 27.397 219 141 9 2 213 67 274 2.89e-11 65.9
MS.gene038083.t1 AT1G01140 28.689 244 140 13 7 236 17 240 3.10e-11 65.5
MS.gene038083.t1 AT1G01140 28.689 244 140 13 7 236 17 240 3.30e-11 65.5
MS.gene038083.t1 AT1G50700 25.597 293 192 10 9 293 73 347 4.34e-11 65.1
MS.gene038083.t1 AT1G76040 27.586 232 147 8 9 233 112 329 4.63e-11 65.1
MS.gene038083.t1 AT1G76040 28.037 214 136 7 9 215 112 314 4.65e-11 65.5
MS.gene038083.t1 AT4G23650 29.167 216 131 7 9 215 78 280 6.32e-11 64.7
MS.gene038083.t1 AT1G50700 25.597 293 192 10 9 293 73 347 6.52e-11 64.7
MS.gene038083.t1 AT4G04720 23.052 308 201 9 2 293 66 353 8.04e-11 64.3
MS.gene038083.t1 AT4G04720 23.052 308 201 9 2 293 66 353 8.04e-11 64.3
MS.gene038083.t1 AT1G50700 25.357 280 184 9 9 281 73 334 8.91e-11 64.3

Find 121 sgRNAs with CRISPR-Local

Find 414 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTAAACTTGGAAGGAAAAT+TGG 0.141980 1.2:-52865597 MS.gene038083:CDS
TAGAATTTGCGCGGTTCCTC+TGG 0.208716 1.2:+52859788 None:intergenic
GAATGGTCACCTGAGGAATT+TGG 0.252408 1.2:+52859241 None:intergenic
CCGACTTCAAAGTGAATTTC+CGG 0.284081 1.2:+52864738 None:intergenic
ACATACCTTCTCGAATAAAA+AGG 0.309439 1.2:+52860348 None:intergenic
CTCTTTAAATATGAATAATC+TGG 0.309704 1.2:+52860383 None:intergenic
CAAGTCATAATTACCTCTAT+TGG 0.319914 1.2:+52861697 None:intergenic
AAAATTGGGAGTGGTTCTTT+TGG 0.322856 1.2:-52865582 MS.gene038083:CDS
TTCAGTTGGGAGAGAGATTC+GGG 0.329420 1.2:-52859845 MS.gene038083:intron
CAACACAATTCAACTCGATA+TGG 0.357353 1.2:-52859298 MS.gene038083:CDS
CATAGCGTGCCGTGCCTGTA+AGG 0.359631 1.2:+52862091 None:intergenic
AATTCCTCAGGTGACCATTC+TGG 0.359748 1.2:-52859238 MS.gene038083:CDS
ATTTATTCAATTATTGTAAC+CGG 0.360177 1.2:-52864757 MS.gene038083:CDS
GTGCTAATGTATTTCTTAAG+AGG 0.362458 1.2:-52861880 MS.gene038083:CDS
TTAAACTTGGAAGGAAAATT+GGG 0.363410 1.2:-52865596 MS.gene038083:CDS
TCCAGCCCTCAGTCCTTGCC+AGG 0.368539 1.2:+52861768 None:intergenic
AGGGAAAATAAGAACCTTAC+AGG 0.372840 1.2:-52862105 MS.gene038083:CDS
TTTCAGTTGGGAGAGAGATT+CGG 0.379707 1.2:-52859846 MS.gene038083:intron
GTCATGGTCATCGACCTTCT+TGG 0.387600 1.2:-52864794 MS.gene038083:CDS
CGACCTTCTTGGACCCAGTC+TGG 0.390528 1.2:-52864783 MS.gene038083:CDS
ATGATTCTTCAAGGAGGAAC+TGG 0.404829 1.2:-52864860 MS.gene038083:CDS
ACCTCAACGAACGGCAATAG+TGG 0.405356 1.2:+52860417 None:intergenic
CCTCAACTCCAAACCATTTG+AGG 0.409202 1.2:+52864828 None:intergenic
GCTTTGAGCTCCTCACTATC+AGG 0.414666 1.2:-52859090 MS.gene038083:CDS
GAGATTCGGGAGAAATTATC+TGG 0.415618 1.2:-52859832 MS.gene038083:CDS
CTCAAATGGTTTGGAGTTGA+GGG 0.423483 1.2:-52864827 MS.gene038083:CDS
TCAGCTGTTAATATACAAAC+TGG 0.426788 1.2:-52865443 MS.gene038083:intron
GCAAGTGTCAACACCCATCT+TGG 0.433561 1.2:-52862069 MS.gene038083:CDS
ATAGGGATCTTCAGACTCAT+AGG 0.434481 1.2:-52862428 MS.gene038083:CDS
TTTATCATGGATCATGTGAT+TGG 0.443086 1.2:-52865627 None:intergenic
CCTCAAATGGTTTGGAGTTG+AGG 0.448526 1.2:-52864828 MS.gene038083:CDS
TTGCCGTTCGTTGAGGTTTG+AGG 0.451388 1.2:-52860411 MS.gene038083:CDS
ATATCGAGTTGAATTGTGTT+GGG 0.458129 1.2:+52859300 None:intergenic
ACAAAGTCGAAGGGATGATC+TGG 0.458546 1.2:-52861917 MS.gene038083:CDS
TTTCGCAAGGCCGAAGTCAA+TGG 0.458863 1.2:+52862455 None:intergenic
ATTGAATAAATCTTCCAGAC+TGG 0.465309 1.2:+52864769 None:intergenic
CATAAAGCACAAAAGATTCC+AGG 0.469567 1.2:-52860051 MS.gene038083:intron
AAACTGTATATGATTCTTCA+AGG 0.471640 1.2:-52864869 MS.gene038083:CDS
GTGGAAAGTTTAAACTTGGA+AGG 0.472881 1.2:-52865605 MS.gene038083:CDS
CTCCAAACCATTTGAGGTGG+GGG 0.473526 1.2:+52864834 None:intergenic
GGCAGGATGGCCACAAGTGG+GGG 0.486821 1.2:-52859217 MS.gene038083:CDS
ATAGTGAAGCTGTGGATGCC+TGG 0.493685 1.2:+52864898 None:intergenic
TCTTCCCTGGCAAGGACTGA+GGG 0.499281 1.2:-52861773 MS.gene038083:CDS
TTGTGGCCATCCTGCCAGAA+TGG 0.501550 1.2:+52859224 None:intergenic
CCCTGGCAAGGACTGAGGGC+TGG 0.502421 1.2:-52861769 MS.gene038083:CDS
GTCAACACCCATCTTGGAAT+CGG 0.505171 1.2:-52862063 MS.gene038083:intron
ATCATCATAAGTCCTATGTC+TGG 0.505727 1.2:+52859744 None:intergenic
CATATCGAGTTGAATTGTGT+TGG 0.505789 1.2:+52859299 None:intergenic
ATTGGTGGAAAGTTTAAACT+TGG 0.508093 1.2:-52865609 MS.gene038083:CDS
AGAGGAGGTGGCTGTTAAGC+TGG 0.511655 1.2:-52865420 MS.gene038083:intron
CAGGTGTATGCCATTGACTT+CGG 0.512497 1.2:-52862465 MS.gene038083:CDS
AGAATTTGCGCGGTTCCTCT+GGG 0.513807 1.2:+52859789 None:intergenic
CTGGCAGGATGGCCACAAGT+GGG 0.513957 1.2:-52859219 MS.gene038083:CDS
AGGGATGATCTGGAATCTCT+TGG 0.515030 1.2:-52861907 MS.gene038083:CDS
GAAGGTATCAACTCCAATAG+AGG 0.515426 1.2:-52861710 MS.gene038083:intron
GTCTTCCCTGGCAAGGACTG+AGG 0.516641 1.2:-52861774 MS.gene038083:CDS
AATTGTCTGGCTTTATGTCT+CGG 0.521040 1.2:+52864552 None:intergenic
ATCACTTACCGATTCCAAGA+TGG 0.522339 1.2:+52862055 None:intergenic
TCCACTATTGCCGTTCGTTG+AGG 0.522705 1.2:-52860418 MS.gene038083:CDS
CAGAGTAGTGGCAGCTCTAG+AGG 0.523385 1.2:-52860193 MS.gene038083:CDS
TCACTTACCGATTCCAAGAT+GGG 0.528445 1.2:+52862056 None:intergenic
AGGCCCATCAGAAAATTGTC+TGG 0.529417 1.2:+52864539 None:intergenic
AACTCCAAACCATTTGAGGT+GGG 0.533255 1.2:+52864832 None:intergenic
TGGCAGGATGGCCACAAGTG+GGG 0.534769 1.2:-52859218 MS.gene038083:CDS
CTCTATGTGCGCCAGATGGA+CGG 0.535759 1.2:+52859194 None:intergenic
CTTGATTTGCTTTACGTCCG+AGG 0.536022 1.2:+52864519 None:intergenic
TTGTAACGACAGCATGGCAC+TGG 0.538838 1.2:-52860105 MS.gene038083:intron
ATCATGGATCATGTGATTGG+TGG 0.540398 1.2:-52865624 MS.gene038083:CDS
TATACAAACTGGAGAGGAGG+TGG 0.543406 1.2:-52865432 MS.gene038083:CDS
TTGAATAAATCTTCCAGACT+GGG 0.547330 1.2:+52864770 None:intergenic
TAATGTATTTCTTAAGAGGA+AGG 0.552033 1.2:-52861876 MS.gene038083:intron
TAGTGGCAGCTCTAGAGGAC+GGG 0.553447 1.2:-52860188 MS.gene038083:intron
TCTGGCAGGATGGCCACAAG+TGG 0.554722 1.2:-52859220 MS.gene038083:CDS
GTAGTGGCAGCTCTAGAGGA+CGG 0.557752 1.2:-52860189 MS.gene038083:CDS
GTTGAATACATGCATTCAAG+AGG 0.558652 1.2:-52864584 MS.gene038083:CDS
TCATCAAAGCCAAATTCCTC+AGG 0.559975 1.2:-52859250 MS.gene038083:CDS
CAACTCCAAACCATTTGAGG+TGG 0.572196 1.2:+52864831 None:intergenic
TCCAGGAATCTGTGAAGACC+AGG 0.574379 1.2:-52864916 MS.gene038083:intron
CCTCAGGTGACCATTCTGGC+AGG 0.574601 1.2:-52859234 MS.gene038083:CDS
AGGTGACCATTCTGGCAGGA+TGG 0.577708 1.2:-52859230 MS.gene038083:CDS
TGGTGTGTTCACCGTGATGA+GGG 0.579905 1.2:+52859764 None:intergenic
CTCATAGGCACATACCGTAC+AGG 0.580718 1.2:-52862413 MS.gene038083:intron
AGACAGACTTACTAATTGAT+CGG 0.581760 1.2:+52864703 None:intergenic
CTTGGAAGGAAAATTGGGAG+TGG 0.582542 1.2:-52865591 MS.gene038083:CDS
CTTCCAGACTGGGTCCAAGA+AGG 0.585280 1.2:+52864780 None:intergenic
GATCACAAAACCAACCTGTA+CGG 0.586380 1.2:+52862399 None:intergenic
GAGATTACTTCCTGATAGTG+AGG 0.590566 1.2:+52859080 None:intergenic
CCAGCCCTCAGTCCTTGCCA+GGG 0.593406 1.2:+52861769 None:intergenic
ACTCCAAACCATTTGAGGTG+GGG 0.595250 1.2:+52864833 None:intergenic
TGAACTCTATGTGCGCCAGA+TGG 0.596034 1.2:+52859190 None:intergenic
ATTTGGCTTTGATGATACCA+TGG 0.597247 1.2:+52859258 None:intergenic
TGGTGGCAGAACAAAGTCGA+AGG 0.597531 1.2:-52861927 MS.gene038083:intron
GCTTGTTTCGTATCATACAC+AGG 0.597643 1.2:+52859166 None:intergenic
ACGGTGAACACACCAGACAT+AGG 0.599179 1.2:-52859756 MS.gene038083:CDS
GCTCGCAATGGGTCTATGAG+AGG 0.601655 1.2:-52859136 MS.gene038083:CDS
CCGGAAATTCACTTTGAAGT+CGG 0.603149 1.2:-52864738 MS.gene038083:CDS
CTGGTGTGTTCACCGTGATG+AGG 0.605762 1.2:+52859763 None:intergenic
AGGAGCTCAAAGCTCCTCAG+AGG 0.611695 1.2:+52859100 None:intergenic
ACATAGGACTTATGATGATG+TGG 0.615199 1.2:-52859740 MS.gene038083:intron
ACGACAGCATGGCACTGGCA+AGG 0.615258 1.2:-52860100 MS.gene038083:intron
TTGAAGTATCCACAGAGTAG+TGG 0.619683 1.2:-52860205 MS.gene038083:CDS
TTTGACTCATAGTGAAGCTG+TGG 0.620621 1.2:+52864890 None:intergenic
CGATAAAATCAGTGAGACGA+AGG 0.621170 1.2:-52861728 MS.gene038083:CDS
TGTCCTCAAACCTCAACGAA+CGG 0.628598 1.2:+52860408 None:intergenic
TGAGGGAGAGTACAATGTCA+TGG 0.631924 1.2:-52864810 MS.gene038083:CDS
AAATAAGAACCTTACAGGCA+CGG 0.632067 1.2:-52862100 MS.gene038083:CDS
GATGAGGGCTAGAATTTGCG+CGG 0.634849 1.2:+52859779 None:intergenic
TAATATACAAACTGGAGAGG+AGG 0.635465 1.2:-52865435 MS.gene038083:CDS
AAGCAGTTCAAGAAGAGCCA+TGG 0.646616 1.2:-52859275 MS.gene038083:CDS
CTAGAGCTGCCACTACTCTG+TGG 0.650464 1.2:+52860196 None:intergenic
AAGTATGATACAAACTCAGA+GGG 0.655305 1.2:+52860440 None:intergenic
TGTTAATATACAAACTGGAG+AGG 0.660638 1.2:-52865438 MS.gene038083:CDS
GAAGTATGATACAAACTCAG+AGG 0.660966 1.2:+52860439 None:intergenic
GGTGGCAGAACAAAGTCGAA+GGG 0.669079 1.2:-52861926 MS.gene038083:intron
TTGTTGAAGCATTCACCCAG+AGG 0.669158 1.2:-52859804 MS.gene038083:CDS
CCTGCCAGAATGGTCACCTG+AGG 0.679602 1.2:+52859234 None:intergenic
GCAAATTCTAGCCCTCATCA+CGG 0.684087 1.2:-52859775 MS.gene038083:CDS
AGCTCCTCAGAGGATCATCA+CGG 0.696325 1.2:+52859110 None:intergenic
GCCACCGTGATGATCCTCTG+AGG 0.725239 1.2:-52859114 MS.gene038083:CDS
CTGTATATGATTCTTCAAGG+AGG 0.728537 1.2:-52864866 MS.gene038083:CDS
TCCTCAGAGGATCATCACGG+TGG 0.751052 1.2:+52859113 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATGAATTATTACATTATT+AGG - chr1.2:52862719-52862738 MS.gene038083:intron 10.0%
!! ATGAATTAAAAACAAAAAAA+AGG + chr1.2:52859181-52859200 None:intergenic 10.0%
!! ATTAAATATAAGAAAATCTT+GGG - chr1.2:52860580-52860599 MS.gene038083:intron 10.0%
!! CCATAAAATAAAATAAAAAA+TGG + chr1.2:52862095-52862114 None:intergenic 10.0%
!! TAATCATATATAGATAATTT+AGG + chr1.2:52860322-52860341 None:intergenic 10.0%
!! TGAATTAAAAACAAAAAAAA+GGG + chr1.2:52859180-52859199 None:intergenic 10.0%
!!! CCATTTTTTATTTTATTTTA+TGG - chr1.2:52862092-52862111 MS.gene038083:CDS 10.0%
!!! TACTTTTCATTTTTAAATTA+CGG - chr1.2:52863273-52863292 MS.gene038083:intron 10.0%
!!! TGTTTTTAATTCATTTATTT+GGG - chr1.2:52859187-52859206 MS.gene038083:CDS 10.0%
!!! TTGTTTTTAATTCATTTATT+TGG - chr1.2:52859186-52859205 MS.gene038083:CDS 10.0%
!!! TTTATGAAAATAACATTTTA+GGG + chr1.2:52864140-52864159 None:intergenic 10.0%
!!! TTTTAGATTTGTAAATAAAA+CGG + chr1.2:52865200-52865219 None:intergenic 10.0%
!!! TTTTATGAAAATAACATTTT+AGG + chr1.2:52864141-52864160 None:intergenic 10.0%
!! AAAAACATAATAGCTTAAAA+TGG + chr1.2:52860407-52860426 None:intergenic 15.0%
!! AAAACATAATAGCTTAAAAT+GGG + chr1.2:52860406-52860425 None:intergenic 15.0%
!! AAAATGACTAATAAAAACTA+AGG - chr1.2:52863685-52863704 MS.gene038083:intron 15.0%
!! ATCATCATACATTAATTATT+AGG - chr1.2:52863794-52863813 MS.gene038083:intron 15.0%
!! ATTTATTCAATTATTGTAAC+CGG - chr1.2:52859948-52859967 MS.gene038083:intron 15.0%
!! CTAAAATATTATCTACATTT+AGG + chr1.2:52862490-52862509 None:intergenic 15.0%
!! GATTAAATATAAGAAAATCT+TGG - chr1.2:52860579-52860598 MS.gene038083:intron 15.0%
!! GATTATGTAATGTTATATTA+TGG + chr1.2:52863777-52863796 None:intergenic 15.0%
!! TAATATGGTTCTTTATATAA+TGG - chr1.2:52860046-52860065 MS.gene038083:intron 15.0%
!! TATTATATTGATATTGATAG+CGG - chr1.2:52861169-52861188 MS.gene038083:intron 15.0%
!!! ATATTTTTCACTAATCAATT+TGG + chr1.2:52863622-52863641 None:intergenic 15.0%
!!! ATGTTTTAAATGTTAACTTT+TGG - chr1.2:52859514-52859533 MS.gene038083:intron 15.0%
!!! CATAGTAATATTTACTTTTT+GGG - chr1.2:52861627-52861646 MS.gene038083:intron 15.0%
!!! TACTTTTCTTTTTCAAATTA+CGG + chr1.2:52864072-52864091 None:intergenic 15.0%
!!! TCATAGTAATATTTACTTTT+TGG - chr1.2:52861626-52861645 MS.gene038083:intron 15.0%
!!! TTTTATGAATTTCTAGAATT+TGG - chr1.2:52859363-52859382 MS.gene038083:intron 15.0%
!!! TTTTATTTTATGGATGTTAT+AGG - chr1.2:52862102-52862121 MS.gene038083:CDS 15.0%
!! AACTAAAACAATATCAAACT+TGG - chr1.2:52862518-52862537 MS.gene038083:intron 20.0%
!! ACAAAATATATTGAGATCAA+TGG + chr1.2:52862556-52862575 None:intergenic 20.0%
!! AGCAATTATTAAGCAATATA+AGG + chr1.2:52862386-52862405 None:intergenic 20.0%
!! ATATTTACAAATGGTAAACA+AGG + chr1.2:52865137-52865156 None:intergenic 20.0%
!! CAAAATATATTGAGATCAAT+GGG + chr1.2:52862555-52862574 None:intergenic 20.0%
!! CTAGTACAAATATTTACAAA+TGG + chr1.2:52865146-52865165 None:intergenic 20.0%
!! CTCTTTAAATATGAATAATC+TGG + chr1.2:52864325-52864344 None:intergenic 20.0%
!! GATATTATCTGAACTATTTA+GGG - chr1.2:52859426-52859445 MS.gene038083:intron 20.0%
!! TATATTATGGAAAAACTTGA+AGG + chr1.2:52863764-52863783 None:intergenic 20.0%
!! TTATGTGAAAAAACATGAAA+TGG + chr1.2:52865090-52865109 None:intergenic 20.0%
!!! AAGCTATTATGTTTTTTCTT+TGG - chr1.2:52860411-52860430 MS.gene038083:CDS 20.0%
!!! ACAAGATTCTATCATTTTTT+CGG + chr1.2:52860998-52861017 None:intergenic 20.0%
!!! ATATTTTTCTTCTTTGCTTA+GGG - chr1.2:52862581-52862600 MS.gene038083:intron 20.0%
!!! ATCCAAATTATTTAAGATGA+TGG + chr1.2:52863432-52863451 None:intergenic 20.0%
!!! GTTGATTTTTTTTTTCATGT+TGG - chr1.2:52859385-52859404 MS.gene038083:intron 20.0%
!!! GTTTCTTGTTTATTAGAAAT+TGG - chr1.2:52863118-52863137 MS.gene038083:intron 20.0%
!!! TAAAAACTAAGGTTTGTTTT+TGG - chr1.2:52863696-52863715 MS.gene038083:intron 20.0%
!!! TACAAAATGAAGTCTTTTAA+AGG + chr1.2:52861973-52861992 None:intergenic 20.0%
!!! TCTTTATTTATATCAAAGAC+AGG + chr1.2:52861393-52861412 None:intergenic 20.0%
!!! TGAAGGTTTTGAATTAAAAT+GGG + chr1.2:52863747-52863766 None:intergenic 20.0%
!!! TTACGTGCTTTTATAAAAAT+AGG - chr1.2:52864225-52864244 MS.gene038083:intron 20.0%
!!! TTGAAGGTTTTGAATTAAAA+TGG + chr1.2:52863748-52863767 None:intergenic 20.0%
!!! TTGTTGTTTTACATTTTTGT+TGG - chr1.2:52864561-52864580 MS.gene038083:CDS 20.0%
!!! TTTTTTTTGTTATCAGTTAG+TGG - chr1.2:52859700-52859719 MS.gene038083:intron 20.0%
! AAACTGTATATGATTCTTCA+AGG - chr1.2:52859836-52859855 MS.gene038083:CDS 25.0%
! AAGCAACTTTCAAAAATTAG+TGG - chr1.2:52863975-52863994 MS.gene038083:intron 25.0%
! AATAAATTAAGTGTGATCAG+TGG + chr1.2:52864027-52864046 None:intergenic 25.0%
! ACCTAGAAAAGAATTATGAT+AGG - chr1.2:52860348-52860367 MS.gene038083:intron 25.0%
! AGAGTCTAAATAGGAATAAA+TGG - chr1.2:52860513-52860532 MS.gene038083:intron 25.0%
! AGCAACTTTCAAAAATTAGT+GGG - chr1.2:52863976-52863995 MS.gene038083:intron 25.0%
! AGCCATCATCTTAAATAATT+TGG - chr1.2:52863427-52863446 MS.gene038083:intron 25.0%
! AGCTGAATAAGAATGAAATT+CGG - chr1.2:52864690-52864709 MS.gene038083:intron 25.0%
! ATATACTAATTGTGTGATTG+TGG - chr1.2:52862758-52862777 MS.gene038083:intron 25.0%
! ATATCATTTATCGAAGGAAA+TGG - chr1.2:52859483-52859502 MS.gene038083:intron 25.0%
! ATGAAAATAAGCAAAATGAC+TGG + chr1.2:52861576-52861595 None:intergenic 25.0%
! ATGTTATAATTAGCACTGTA+TGG + chr1.2:52861877-52861896 None:intergenic 25.0%
! CCTAGAAAAGAATTATGATA+GGG - chr1.2:52860349-52860368 MS.gene038083:intron 25.0%
! GGATATTATCTGAACTATTT+AGG - chr1.2:52859425-52859444 MS.gene038083:intron 25.0%
! GGTAAACAAGGTAAAAAAAA+GGG + chr1.2:52865125-52865144 None:intergenic 25.0%
! GTGATTTCCAGTAAAAAAAA+TGG + chr1.2:52862465-52862484 None:intergenic 25.0%
! TAATGTATTTCTTAAGAGGA+AGG - chr1.2:52862829-52862848 MS.gene038083:intron 25.0%
! TCAGTTTATTAATTTCATCG+TGG - chr1.2:52861843-52861862 MS.gene038083:intron 25.0%
! TGGTAAACAAGGTAAAAAAA+AGG + chr1.2:52865126-52865145 None:intergenic 25.0%
! TTAAACTTGGAAGGAAAATT+GGG - chr1.2:52859109-52859128 MS.gene038083:CDS 25.0%
! TTAATTCCTTTGTCTATTGT+GGG - chr1.2:52860251-52860270 MS.gene038083:intron 25.0%
! TTAGGTTAAGCTAAACAATT+AGG - chr1.2:52862351-52862370 MS.gene038083:intron 25.0%
! TTCAGTTATTTGTGTTTGAA+AGG - chr1.2:52860795-52860814 MS.gene038083:intron 25.0%
! TTGGCGAAAGTTATTTAATA+TGG - chr1.2:52860031-52860050 MS.gene038083:intron 25.0%
! TTTAAACTTGGAAGGAAAAT+TGG - chr1.2:52859108-52859127 MS.gene038083:CDS 25.0%
! TTTAATTCCTTTGTCTATTG+TGG - chr1.2:52860250-52860269 MS.gene038083:intron 25.0%
!! AAAAAACAAACAAAAGTGTG+AGG + chr1.2:52860089-52860108 None:intergenic 25.0%
!! AAAGCAATTGGTTTCTTTAA+GGG - chr1.2:52862008-52862027 MS.gene038083:intron 25.0%
!! AATGTTAACTTTTGGTCAAT+AGG - chr1.2:52859522-52859541 MS.gene038083:intron 25.0%
!! AGTATATTTTGCTGGAAATT+CGG - chr1.2:52864408-52864427 MS.gene038083:intron 25.0%
!! ATGCATTTTCCACATTATTT+TGG + chr1.2:52864386-52864405 None:intergenic 25.0%
!! GATATTTTTCTTCTTTGCTT+AGG - chr1.2:52862580-52862599 MS.gene038083:intron 25.0%
!! TATTTTCATATCACGTCTAT+TGG - chr1.2:52861587-52861606 MS.gene038083:intron 25.0%
!! TGCATTTTCCACATTATTTT+GGG + chr1.2:52864385-52864404 None:intergenic 25.0%
!! TGTCATATATTTTCTTGTGT+GGG - chr1.2:52860472-52860491 MS.gene038083:intron 25.0%
!! TTTGTGATCATAATTTTAGG+AGG - chr1.2:52862320-52862339 MS.gene038083:intron 25.0%
!!! AACATCAACTTTTTTTACCA+GGG + chr1.2:52861047-52861066 None:intergenic 25.0%
!!! AACTTAGGATTTTAAAGGAA+AGG + chr1.2:52861551-52861570 None:intergenic 25.0%
!!! AATTTGACTATGTTTTTGAC+TGG - chr1.2:52864471-52864490 MS.gene038083:intron 25.0%
!!! AGTAATATTTACTTTTTGGG+AGG - chr1.2:52861630-52861649 MS.gene038083:intron 25.0%
!!! AGTCTTTTAAAGGATACAAA+CGG + chr1.2:52861963-52861982 None:intergenic 25.0%
!!! CAGTCGATTATATTTAGTTT+TGG + chr1.2:52862195-52862214 None:intergenic 25.0%
!!! CATTTTGGTCTCTAAATATA+TGG - chr1.2:52863515-52863534 MS.gene038083:intron 25.0%
!!! GGTTTTGTGATCATAATTTT+AGG - chr1.2:52862317-52862336 MS.gene038083:intron 25.0%
!!! GTAATATTTACTTTTTGGGA+GGG - chr1.2:52861631-52861650 MS.gene038083:intron 25.0%
!!! TAACATCAACTTTTTTTACC+AGG + chr1.2:52861048-52861067 None:intergenic 25.0%
!!! TGTTATGCCATTTTTTTTAC+TGG - chr1.2:52862455-52862474 MS.gene038083:CDS 25.0%
!!! TTGGTTCTAGATGTATTATT+AGG - chr1.2:52859404-52859423 MS.gene038083:intron 25.0%
!!! TTGTGATCATAATTTTAGGA+GGG - chr1.2:52862321-52862340 MS.gene038083:intron 25.0%
AAAAAAAAACTGACAGATGC+AGG + chr1.2:52863038-52863057 None:intergenic 30.0%
AAAAGTTTGATAGAGGAGTA+TGG - chr1.2:52860290-52860309 MS.gene038083:intron 30.0%
AAGCATTCCTAAAGATGTTA+TGG + chr1.2:52863883-52863902 None:intergenic 30.0%
AAGTATGATACAAACTCAGA+GGG + chr1.2:52864268-52864287 None:intergenic 30.0%
AATATTTCAATCACACTCAG+TGG - chr1.2:52863353-52863372 MS.gene038083:intron 30.0%
ACATACCTTCTCGAATAAAA+AGG + chr1.2:52864360-52864379 None:intergenic 30.0%
AGACAGACTTACTAATTGAT+CGG + chr1.2:52860005-52860024 None:intergenic 30.0%
ATATTCCCCTCTTAATATTC+AGG + chr1.2:52860643-52860662 None:intergenic 30.0%
ATGACATCAAAATACAAGCT+TGG - chr1.2:52861444-52861463 MS.gene038083:intron 30.0%
ATTGAATAAATCTTCCAGAC+TGG + chr1.2:52859939-52859958 None:intergenic 30.0%
ATTGGTGGAAAGTTTAAACT+TGG - chr1.2:52859096-52859115 MS.gene038083:CDS 30.0%
CAACTCAACATTATACTCAA+GGG + chr1.2:52861753-52861772 None:intergenic 30.0%
CAAGTCATAATTACCTCTAT+TGG + chr1.2:52863011-52863030 None:intergenic 30.0%
CATAGTTGAAGAGTCTAAAT+AGG - chr1.2:52860504-52860523 MS.gene038083:intron 30.0%
CCAAAATGACAACTCTAAAT+TGG + chr1.2:52863503-52863522 None:intergenic 30.0%
CTATAGACAAGTATAACACA+TGG - chr1.2:52860375-52860394 MS.gene038083:CDS 30.0%
GAAAAGATATGATTGTGCAA+TGG - chr1.2:52860911-52860930 MS.gene038083:intron 30.0%
GAATATTAAGAGGGGAATAT+TGG - chr1.2:52860643-52860662 MS.gene038083:intron 30.0%
GATGTACAATACTAACTTAG+AGG - chr1.2:52863471-52863490 MS.gene038083:intron 30.0%
GCAACTTTCAAAAATTAGTG+GGG - chr1.2:52863977-52863996 MS.gene038083:intron 30.0%
GTATGACCTGAATATTAAGA+GGG - chr1.2:52860634-52860653 MS.gene038083:intron 30.0%
GTATGTTACCCAAAATAATG+TGG - chr1.2:52864374-52864393 MS.gene038083:intron 30.0%
GTGCTAATGTATTTCTTAAG+AGG - chr1.2:52862825-52862844 MS.gene038083:intron 30.0%
TACCCATTATAATGAGTCTT+CGG - chr1.2:52861415-52861434 MS.gene038083:intron 30.0%
TATAATTAGCACTGTATGGT+TGG + chr1.2:52861873-52861892 None:intergenic 30.0%
TATGACCTGAATATTAAGAG+GGG - chr1.2:52860635-52860654 MS.gene038083:intron 30.0%
TCAGCTGTTAATATACAAAC+TGG - chr1.2:52859262-52859281 MS.gene038083:CDS 30.0%
TCTTGAAATGAGATGTGAAA+TGG - chr1.2:52859557-52859576 MS.gene038083:intron 30.0%
TGGAGAAAGATATAAATCGT+AGG - chr1.2:52860740-52860759 MS.gene038083:intron 30.0%
TGGTTGAGTAACATTTGAAT+TGG - chr1.2:52861464-52861483 MS.gene038083:intron 30.0%
TGTTAATATACAAACTGGAG+AGG - chr1.2:52859267-52859286 MS.gene038083:CDS 30.0%
TTGAATAAATCTTCCAGACT+GGG + chr1.2:52859938-52859957 None:intergenic 30.0%
! AAAGTTTGATAGAGGAGTAT+GGG - chr1.2:52860291-52860310 MS.gene038083:intron 30.0%
! AAGATTTTACATGAGACAGA+AGG + chr1.2:52864180-52864199 None:intergenic 30.0%
! AGATTTTACATGAGACAGAA+GGG + chr1.2:52864179-52864198 None:intergenic 30.0%
! ATAACATCTTTAGGAATGCT+TGG - chr1.2:52863882-52863901 MS.gene038083:intron 30.0%
! ATCTTTTGTGCTTTATGTAC+TGG + chr1.2:52864651-52864670 None:intergenic 30.0%
! ATGCATTCAGTATATTTTGC+TGG - chr1.2:52864400-52864419 MS.gene038083:intron 30.0%
! ATTTCCTTCAAACTTTTGAG+AGG + chr1.2:52860823-52860842 None:intergenic 30.0%
! CAAAGCAATTGGTTTCTTTA+AGG - chr1.2:52862007-52862026 MS.gene038083:intron 30.0%
! CCCTATCATAATTCTTTTCT+AGG + chr1.2:52860352-52860371 None:intergenic 30.0%
! CCTCTATCAAACTTTTCAAA+AGG + chr1.2:52860286-52860305 None:intergenic 30.0%
! CTGTCATATATTTTCTTGTG+TGG - chr1.2:52860471-52860490 MS.gene038083:intron 30.0%
! TAGTTTTTGACAGAATGCAA+CGG - chr1.2:52861308-52861327 MS.gene038083:intron 30.0%
! TCATGCTATTTGTTTCAGTT+GGG - chr1.2:52864847-52864866 MS.gene038083:CDS 30.0%
! TGGTGAACTTAGGATTTTAA+AGG + chr1.2:52861556-52861575 None:intergenic 30.0%
! TTAGAGATGAGAATTTTGCA+GGG - chr1.2:52860871-52860890 MS.gene038083:intron 30.0%
! TTCATGCTATTTGTTTCAGT+TGG - chr1.2:52864846-52864865 MS.gene038083:CDS 30.0%
! TTGTGTAGTTTGGATGATTT+TGG - chr1.2:52861357-52861376 MS.gene038083:intron 30.0%
! TTTAGAGATGAGAATTTTGC+AGG - chr1.2:52860870-52860889 MS.gene038083:intron 30.0%
!! ATATCGAGTTGAATTGTGTT+GGG + chr1.2:52865408-52865427 None:intergenic 30.0%
!! CCAATTTAGAGTTGTCATTT+TGG - chr1.2:52863500-52863519 MS.gene038083:intron 30.0%
!! CCTTTTGAAAAGTTTGATAG+AGG - chr1.2:52860283-52860302 MS.gene038083:intron 30.0%
!! GTTTTAATGGTTGTGTAGTT+TGG - chr1.2:52861347-52861366 MS.gene038083:intron 30.0%
!! TTTTTGTTATCAGTTAGTGG+TGG - chr1.2:52859703-52859722 MS.gene038083:intron 30.0%
!!! ATAACATTTTAGGGTGTGTT+TGG + chr1.2:52864131-52864150 None:intergenic 30.0%
!!! CATTTGATTCGTGGTTTTAA+TGG - chr1.2:52861334-52861353 MS.gene038083:intron 30.0%
AAACACTTGACTTCTCTTGT+TGG + chr1.2:52860852-52860871 None:intergenic 35.0%
AAAGGCTCCATAACATCTTT+AGG - chr1.2:52863873-52863892 MS.gene038083:intron 35.0%
AAATAAGAACCTTACAGGCA+CGG - chr1.2:52862605-52862624 MS.gene038083:intron 35.0%
AAATTAAGTGTGATCAGTGG+CGG + chr1.2:52864024-52864043 None:intergenic 35.0%
AGAATCTTGTCTAACATGTG+AGG - chr1.2:52861008-52861027 MS.gene038083:intron 35.0%
AGACAAGTATAACACATGGT+AGG - chr1.2:52860379-52860398 MS.gene038083:CDS 35.0%
AGCCTTTAAACAAAAACGCT+TGG + chr1.2:52863860-52863879 None:intergenic 35.0%
AGCGTAAGTCATTGAACTAA+AGG + chr1.2:52861666-52861685 None:intergenic 35.0%
AGGGAAAATAAGAACCTTAC+AGG - chr1.2:52862600-52862619 MS.gene038083:intron 35.0%
ATCATCATAAGTCCTATGTC+TGG + chr1.2:52864964-52864983 None:intergenic 35.0%
ATGCAATAGTGCTCAATAAC+TGG + chr1.2:52863098-52863117 None:intergenic 35.0%
ATGCCGAAGACTCATTATAA+TGG + chr1.2:52861421-52861440 None:intergenic 35.0%
ATGTTCTTACTAGCATATCC+AGG - chr1.2:52860440-52860459 MS.gene038083:CDS 35.0%
ATTGAACCCACAATAGACAA+AGG + chr1.2:52860260-52860279 None:intergenic 35.0%
ATTTCCTAAATTTGTCGTGC+AGG + chr1.2:52861720-52861739 None:intergenic 35.0%
CAACACAATTCAACTCGATA+TGG - chr1.2:52865407-52865426 MS.gene038083:intron 35.0%
CAGTTGAATGCAGGAAATAT+AGG + chr1.2:52863191-52863210 None:intergenic 35.0%
CATAAAGCACAAAAGATTCC+AGG - chr1.2:52864654-52864673 MS.gene038083:intron 35.0%
CATATTAATGCCACAACACA+AGG - chr1.2:52860670-52860689 MS.gene038083:intron 35.0%
CATTCAACTGTTAGCACTTA+GGG - chr1.2:52863201-52863220 MS.gene038083:intron 35.0%
CCAACTCAACATTATACTCA+AGG + chr1.2:52861754-52861773 None:intergenic 35.0%
CCTTGAGTATAATGTTGAGT+TGG - chr1.2:52861751-52861770 MS.gene038083:CDS 35.0%
CTGTATATGATTCTTCAAGG+AGG - chr1.2:52859839-52859858 MS.gene038083:CDS 35.0%
CTTCTCGAATAAAAAGGTCT+CGG + chr1.2:52864354-52864373 None:intergenic 35.0%
CTTGCGATATCATTTATCGA+AGG - chr1.2:52859477-52859496 MS.gene038083:intron 35.0%
CTTGGTATGATAGATTCAAG+GGG + chr1.2:52860709-52860728 None:intergenic 35.0%
GAAAAACTCAAGGACAAACA+TGG + chr1.2:52861503-52861522 None:intergenic 35.0%
GAAGTATGATACAAACTCAG+AGG + chr1.2:52864269-52864288 None:intergenic 35.0%
GACAAGTATAACACATGGTA+GGG - chr1.2:52860380-52860399 MS.gene038083:CDS 35.0%
GAGTACTCTTGAAAAACTCA+AGG + chr1.2:52861513-52861532 None:intergenic 35.0%
GCTTGGTATGATAGATTCAA+GGG + chr1.2:52860710-52860729 None:intergenic 35.0%
GGATACAAACGGTTAAGTTT+AGG + chr1.2:52861952-52861971 None:intergenic 35.0%
GGTATGACCTGAATATTAAG+AGG - chr1.2:52860633-52860652 MS.gene038083:intron 35.0%
GGTTCTGTCAAAAATATTCC+AGG - chr1.2:52859772-52859791 MS.gene038083:CDS 35.0%
GTGGAAAGTTTAAACTTGGA+AGG - chr1.2:52859100-52859119 MS.gene038083:CDS 35.0%
GTTGAATACATGCATTCAAG+AGG - chr1.2:52860121-52860140 MS.gene038083:intron 35.0%
TAATATACAAACTGGAGAGG+AGG - chr1.2:52859270-52859289 MS.gene038083:CDS 35.0%
TACTAATTGTGTGATTGTGG+TGG - chr1.2:52862761-52862780 MS.gene038083:intron 35.0%
TATTAAGAGGGGAATATTGG+AGG - chr1.2:52860646-52860665 MS.gene038083:intron 35.0%
TCCAATTTCCAATTGTCTCA+CGG - chr1.2:52859751-52859770 MS.gene038083:CDS 35.0%
TGAGATCAATGGGAATTTGT+GGG + chr1.2:52862545-52862564 None:intergenic 35.0%
TGCCGAAGACTCATTATAAT+GGG + chr1.2:52861420-52861439 None:intergenic 35.0%
TGCTTGATTGCACTATGTAA+CGG + chr1.2:52861229-52861248 None:intergenic 35.0%
TTGAGATCAATGGGAATTTG+TGG + chr1.2:52862546-52862565 None:intergenic 35.0%
TTTCCTAAATTTGTCGTGCA+GGG + chr1.2:52861719-52861738 None:intergenic 35.0%
! AAAATTGGGAGTGGTTCTTT+TGG - chr1.2:52859123-52859142 MS.gene038083:CDS 35.0%
! AAAGCCAGACAATTTTCTGA+TGG - chr1.2:52860162-52860181 MS.gene038083:intron 35.0%
! AAGCCAGACAATTTTCTGAT+GGG - chr1.2:52860163-52860182 MS.gene038083:intron 35.0%
! ACATAGGACTTATGATGATG+TGG - chr1.2:52864965-52864984 MS.gene038083:intron 35.0%
! ATATTTTGCTGGAAATTCGG+TGG - chr1.2:52864411-52864430 MS.gene038083:intron 35.0%
! CAATTGGTTTCTTTAAGGGT+GGG - chr1.2:52862012-52862031 MS.gene038083:intron 35.0%
! CATTTTATCGTGTTAACGCT+AGG + chr1.2:52861926-52861945 None:intergenic 35.0%
! CGGTAAGTGATATTTTATGC+TGG - chr1.2:52862662-52862681 MS.gene038083:intron 35.0%
! GTTAACTTTTGGTCAATAGG+TGG - chr1.2:52859525-52859544 MS.gene038083:intron 35.0%
! TAGAGATGAGAATTTTGCAG+GGG - chr1.2:52860872-52860891 MS.gene038083:intron 35.0%
! TCATTTTGTAGTCTCCTTGT+TGG - chr1.2:52861983-52862002 MS.gene038083:intron 35.0%
! TGTAAATTCGTAGTCTTGAC+AGG + chr1.2:52860944-52860963 None:intergenic 35.0%
! TGTTTTTCCTACTCTCTCTT+GGG + chr1.2:52860968-52860987 None:intergenic 35.0%
! TTCAAGTGAGTTGGATGAAA+TGG - chr1.2:52860764-52860783 MS.gene038083:intron 35.0%
! TTTGACATGTGCACACATTT+TGG - chr1.2:52861796-52861815 MS.gene038083:intron 35.0%
!! AATTGTCTGGCTTTATGTCT+CGG + chr1.2:52860156-52860175 None:intergenic 35.0%
!! AGCCAAGCGTTTTTGTTTAA+AGG - chr1.2:52863855-52863874 MS.gene038083:intron 35.0%
!! ATGCTGGTTTGTTACTTTCT+CGG - chr1.2:52862678-52862697 MS.gene038083:intron 35.0%
!! ATTTGGCTTTGATGATACCA+TGG + chr1.2:52865450-52865469 None:intergenic 35.0%
!! ATTTTCTTGTGTGGGTTGTA+TGG - chr1.2:52860480-52860499 MS.gene038083:intron 35.0%
!! CATATCGAGTTGAATTGTGT+TGG + chr1.2:52865409-52865428 None:intergenic 35.0%
!! TCTTTTGGAGAGCTCTATTT+AGG - chr1.2:52859138-52859157 MS.gene038083:CDS 35.0%
!! TGAGAATGTTGTTTCCTGTT+TGG - chr1.2:52865042-52865061 MS.gene038083:intron 35.0%
!! TTTTAGGAGGGAGCAATATT+AGG - chr1.2:52862333-52862352 MS.gene038083:intron 35.0%
!!! GATCCCTATATTTTTTCGCA+AGG + chr1.2:52862266-52862285 None:intergenic 35.0%
AACGTCTTGTCAAACCAAAC+AGG + chr1.2:52865059-52865078 None:intergenic 40.0%
AAGTGCTAACAGTTGAATGC+AGG + chr1.2:52863200-52863219 None:intergenic 40.0%
ACCAATTGCTTTGACCAACA+AGG + chr1.2:52862000-52862019 None:intergenic 40.0%
ACCGTGAGACAATTGGAAAT+TGG + chr1.2:52859755-52859774 None:intergenic 40.0%
AGCTGCAAAACAGAATTGTG+AGG + chr1.2:52859597-52859616 None:intergenic 40.0%
AGGTCATACCATATCCAATG+TGG + chr1.2:52860623-52860642 None:intergenic 40.0%
AGTAAGTCTGTCTGTCAAGT+TGG - chr1.2:52860012-52860031 MS.gene038083:intron 40.0%
ATAGGGATCTTCAGACTCAT+AGG - chr1.2:52862277-52862296 MS.gene038083:intron 40.0%
ATCGTAGGATTCAAGTGAGT+TGG - chr1.2:52860755-52860774 MS.gene038083:intron 40.0%
ATGATTCTTCAAGGAGGAAC+TGG - chr1.2:52859845-52859864 MS.gene038083:intron 40.0%
ATGGCATAACAGCCTGTTAA+AGG + chr1.2:52862446-52862465 None:intergenic 40.0%
CACACTCTGTATCTCATTTC+AGG - chr1.2:52862221-52862240 MS.gene038083:intron 40.0%
CCGACTTCAAAGTGAATTTC+CGG + chr1.2:52859970-52859989 None:intergenic 40.0%
CGATAAAATCAGTGAGACGA+AGG - chr1.2:52862977-52862996 MS.gene038083:intron 40.0%
CGCTTGGTATGATAGATTCA+AGG + chr1.2:52860711-52860730 None:intergenic 40.0%
CGGCCTTGCGAAAAAATATA+GGG - chr1.2:52862260-52862279 MS.gene038083:intron 40.0%
CTCAACACTTTCTGTTGTGT+TGG + chr1.2:52863829-52863848 None:intergenic 40.0%
GAGATTCGGGAGAAATTATC+TGG - chr1.2:52864873-52864892 MS.gene038083:CDS 40.0%
GATCACAAAACCAACCTGTA+CGG + chr1.2:52862309-52862328 None:intergenic 40.0%
GCAAAATGACTGGTGAACTT+AGG + chr1.2:52861566-52861585 None:intergenic 40.0%
GCATGCAAGTGACTTTATGT+TGG - chr1.2:52861818-52861837 MS.gene038083:intron 40.0%
GCATTCAACTGTTAGCACTT+AGG - chr1.2:52863200-52863219 MS.gene038083:intron 40.0%
GCTTGTTTCGTATCATACAC+AGG + chr1.2:52865542-52865561 None:intergenic 40.0%
GGTACCTCTCAAAAGTTTGA+AGG - chr1.2:52860816-52860835 MS.gene038083:intron 40.0%
GGTCATACCATATCCAATGT+GGG + chr1.2:52860622-52860641 None:intergenic 40.0%
GGTGGGAATTTCTTAATCGT+TGG - chr1.2:52862029-52862048 MS.gene038083:intron 40.0%
TCAAGGACAAACATGGAAAC+AGG + chr1.2:52861496-52861515 None:intergenic 40.0%
TCATCAAAGCCAAATTCCTC+AGG - chr1.2:52865455-52865474 MS.gene038083:intron 40.0%
TCCTTGTTGGTCAAAGCAAT+TGG - chr1.2:52861996-52862015 MS.gene038083:intron 40.0%
TCGGCCTTGCGAAAAAATAT+AGG - chr1.2:52862259-52862278 MS.gene038083:intron 40.0%
TGGCATAACAGCCTGTTAAA+GGG + chr1.2:52862445-52862464 None:intergenic 40.0%
TGTGTTTGGATTGAGGGTTT+AGG + chr1.2:52864117-52864136 None:intergenic 40.0%
TTAGGGTGTGTTTGGATTGA+GGG + chr1.2:52864123-52864142 None:intergenic 40.0%
TTCTTACTAGCATATCCAGG+AGG - chr1.2:52860443-52860462 MS.gene038083:CDS 40.0%
TTGGTCAATAGGTGGATGAT+TGG - chr1.2:52859533-52859552 MS.gene038083:intron 40.0%
TTTACAACCCAAGAGAGAGT+AGG - chr1.2:52860958-52860977 MS.gene038083:intron 40.0%
TTTCAGTTGGGAGAGAGATT+CGG - chr1.2:52864859-52864878 MS.gene038083:CDS 40.0%
TTTGACTCATAGTGAAGCTG+TGG + chr1.2:52859818-52859837 None:intergenic 40.0%
TTTGGATTGAGGGTTTAGGA+GGG + chr1.2:52864113-52864132 None:intergenic 40.0%
! AACTCCAAACCATTTGAGGT+GGG + chr1.2:52859876-52859895 None:intergenic 40.0%
! AAGCAACTTTTGCTCGCAAT+GGG - chr1.2:52865558-52865577 MS.gene038083:intron 40.0%
! ACATTTGTTGAGTCCCACAT+TGG - chr1.2:52860606-52860625 MS.gene038083:intron 40.0%
! CGAGACCTTTTTATTCGAGA+AGG - chr1.2:52864352-52864371 MS.gene038083:intron 40.0%
! CTCAAATGGTTTGGAGTTGA+GGG - chr1.2:52859878-52859897 MS.gene038083:intron 40.0%
! CTGTTGCTCAGTTCTTTTCA+AGG + chr1.2:52861075-52861094 None:intergenic 40.0%
! GCAATTGGTTTCTTTAAGGG+TGG - chr1.2:52862011-52862030 MS.gene038083:intron 40.0%
! GTGTTTTTCCTACTCTCTCT+TGG + chr1.2:52860969-52860988 None:intergenic 40.0%
! TGTGTTTGGATGGAGTGTTT+AGG - chr1.2:52863224-52863243 MS.gene038083:intron 40.0%
! TTGAAGTATCCACAGAGTAG+TGG - chr1.2:52864500-52864519 MS.gene038083:intron 40.0%
! TTTAGGGTGTGTTTGGATTG+AGG + chr1.2:52864124-52864143 None:intergenic 40.0%
! TTTGGATGGAGTGTTTAGGA+GGG - chr1.2:52863228-52863247 MS.gene038083:intron 40.0%
! TTTTTGTTGGTCGCTTACTG+TGG - chr1.2:52864574-52864593 MS.gene038083:CDS 40.0%
!! ATCACTTACCGATTCCAAGA+TGG + chr1.2:52862653-52862672 None:intergenic 40.0%
!! CCGGAAATTCACTTTGAAGT+CGG - chr1.2:52859967-52859986 MS.gene038083:intron 40.0%
!! GAAGGTATCAACTCCAATAG+AGG - chr1.2:52862995-52863014 MS.gene038083:intron 40.0%
!! GGATTTTAAAGGAAAGGTCC+AGG + chr1.2:52861545-52861564 None:intergenic 40.0%
!! GGTTTGTTACTTTCTCGGTT+AGG - chr1.2:52862683-52862702 MS.gene038083:intron 40.0%
!! TCACTTACCGATTCCAAGAT+GGG + chr1.2:52862652-52862671 None:intergenic 40.0%
!!! TTTCCTTTTTCAGTCTTCCC+TGG - chr1.2:52862919-52862938 MS.gene038083:intron 40.0%
AAACTGTGCACCTTGTGTTG+TGG + chr1.2:52860683-52860702 None:intergenic 45.0%
AAGCAGTTCAAGAAGAGCCA+TGG - chr1.2:52865430-52865449 MS.gene038083:CDS 45.0%
AATTCCTCAGGTGACCATTC+TGG - chr1.2:52865467-52865486 MS.gene038083:intron 45.0%
ACAAAGTCGAAGGGATGATC+TGG - chr1.2:52862788-52862807 MS.gene038083:intron 45.0%
AGGCCCATCAGAAAATTGTC+TGG + chr1.2:52860169-52860188 None:intergenic 45.0%
CAACACAAGGTGCACAGTTT+CGG - chr1.2:52860683-52860702 MS.gene038083:intron 45.0%
CAACTCCAAACCATTTGAGG+TGG + chr1.2:52859877-52859896 None:intergenic 45.0%
CATACCAAGCGACGAAGAAA+TGG - chr1.2:52860720-52860739 MS.gene038083:intron 45.0%
CCTCAACTCCAAACCATTTG+AGG + chr1.2:52859880-52859899 None:intergenic 45.0%
CGCAAGCATGCTCAATTTCA+TGG + chr1.2:52859463-52859482 None:intergenic 45.0%
CGCATTTGCATCCCTTTAAC+AGG - chr1.2:52862431-52862450 MS.gene038083:CDS 45.0%
CTGTCACAGCACATATTAGC+AGG + chr1.2:52864719-52864738 None:intergenic 45.0%
CTTGGAAGGAAAATTGGGAG+TGG - chr1.2:52859114-52859133 MS.gene038083:CDS 45.0%
GAATGGTCACCTGAGGAATT+TGG + chr1.2:52865467-52865486 None:intergenic 45.0%
GAGACAGAAGGGAAATGAAG+AGG + chr1.2:52864168-52864187 None:intergenic 45.0%
GAGGAGTCTAATAGAAACCC+TGG - chr1.2:52861027-52861046 MS.gene038083:intron 45.0%
GATCCCTGCACGACAAATTT+AGG - chr1.2:52861713-52861732 MS.gene038083:CDS 45.0%
GCAAATTCTAGCCCTCATCA+CGG - chr1.2:52864930-52864949 MS.gene038083:intron 45.0%
GCAGGGATCTATGCTATGAA+CGG + chr1.2:52861702-52861721 None:intergenic 45.0%
GTCAACACCCATCTTGGAAT+CGG - chr1.2:52862642-52862661 MS.gene038083:intron 45.0%
GTTAGCACTTAGGGTGTGTT+TGG - chr1.2:52863210-52863229 MS.gene038083:intron 45.0%
GTTGAGTCCCACATTGGATA+TGG - chr1.2:52860612-52860631 MS.gene038083:intron 45.0%
GTTTGGATTGAGGGTTTAGG+AGG + chr1.2:52864114-52864133 None:intergenic 45.0%
TATACAAACTGGAGAGGAGG+TGG - chr1.2:52859273-52859292 MS.gene038083:CDS 45.0%
TATATGACAGCGTTACCTCC+TGG + chr1.2:52860461-52860480 None:intergenic 45.0%
TGACAGAACCGTGAGACAAT+TGG + chr1.2:52859762-52859781 None:intergenic 45.0%
TGGTTGTTGTAACGACAGCA+TGG - chr1.2:52864594-52864613 MS.gene038083:CDS 45.0%
TGTCCTCAAACCTCAACGAA+CGG + chr1.2:52864300-52864319 None:intergenic 45.0%
TTCAGTTGGGAGAGAGATTC+GGG - chr1.2:52864860-52864879 MS.gene038083:CDS 45.0%
TTCTCCATTTCTTCGTCGCT+TGG + chr1.2:52860727-52860746 None:intergenic 45.0%
TTGCCAGGGAAGACTGAAAA+AGG + chr1.2:52862925-52862944 None:intergenic 45.0%
TTGGATTGAGGGTTTAGGAG+GGG + chr1.2:52864112-52864131 None:intergenic 45.0%
! ACTCCAAACCATTTGAGGTG+GGG + chr1.2:52859875-52859894 None:intergenic 45.0%
! AGAATTTTGCAGGGGATGAG+TGG - chr1.2:52860880-52860899 MS.gene038083:intron 45.0%
! AGGGATGATCTGGAATCTCT+TGG - chr1.2:52862798-52862817 MS.gene038083:intron 45.0%
! CAAGCAACTTTTGCTCGCAA+TGG - chr1.2:52865557-52865576 MS.gene038083:intron 45.0%
! CCTCAAATGGTTTGGAGTTG+AGG - chr1.2:52859877-52859896 MS.gene038083:intron 45.0%
! GTTTGGATGGAGTGTTTAGG+AGG - chr1.2:52863227-52863246 MS.gene038083:intron 45.0%
! TGAGGGAGAGTACAATGTCA+TGG - chr1.2:52859895-52859914 MS.gene038083:intron 45.0%
! TTGGATGGAGTGTTTAGGAG+GGG - chr1.2:52863229-52863248 MS.gene038083:intron 45.0%
! TTGTTGAAGCATTCACCCAG+AGG - chr1.2:52864901-52864920 MS.gene038083:CDS 45.0%
!! CAGGTGTATGCCATTGACTT+CGG - chr1.2:52862240-52862259 MS.gene038083:intron 45.0%
!! CTTGATTTGCTTTACGTCCG+AGG + chr1.2:52860189-52860208 None:intergenic 45.0%
!! GACAATTTTCTGATGGGCCT+CGG - chr1.2:52860169-52860188 MS.gene038083:intron 45.0%
!! TTTTTCAGTCTTCCCTGGCA+AGG - chr1.2:52862924-52862943 MS.gene038083:intron 45.0%
ACCTCAACGAACGGCAATAG+TGG + chr1.2:52864291-52864310 None:intergenic 50.0%
ACGGTGAACACACCAGACAT+AGG - chr1.2:52864949-52864968 MS.gene038083:intron 50.0%
AGAATTTGCGCGGTTCCTCT+GGG + chr1.2:52864919-52864938 None:intergenic 50.0%
AGCTCCTCAGAGGATCATCA+CGG + chr1.2:52865598-52865617 None:intergenic 50.0%
ATAGTGAAGCTGTGGATGCC+TGG + chr1.2:52859810-52859829 None:intergenic 50.0%
ATCCCCCACCTCAAATGGTT+TGG - chr1.2:52859869-52859888 MS.gene038083:intron 50.0%
CAAGCAACTGCAAGCTAGTC+AGG - chr1.2:52861243-52861262 MS.gene038083:intron 50.0%
CAGCTGAAAGACAACAGACC+TGG + chr1.2:52864675-52864694 None:intergenic 50.0%
CGGTGGTTGTGAATTGACGT+GGG - chr1.2:52864428-52864447 MS.gene038083:intron 50.0%
CTCATAGGCACATACCGTAC+AGG - chr1.2:52862292-52862311 MS.gene038083:intron 50.0%
GATGAGGGCTAGAATTTGCG+CGG + chr1.2:52864929-52864948 None:intergenic 50.0%
GCAAGTGTCAACACCCATCT+TGG - chr1.2:52862636-52862655 MS.gene038083:intron 50.0%
GCACTTAGGGTGTGTTTGGA+TGG - chr1.2:52863214-52863233 MS.gene038083:intron 50.0%
GGTGGCAGAACAAAGTCGAA+GGG - chr1.2:52862779-52862798 MS.gene038083:intron 50.0%
GTCATGGTCATCGACCTTCT+TGG - chr1.2:52859911-52859930 MS.gene038083:intron 50.0%
TAGAATTTGCGCGGTTCCTC+TGG + chr1.2:52864920-52864939 None:intergenic 50.0%
TAGGCACATACCGTACAGGT+TGG - chr1.2:52862296-52862315 MS.gene038083:intron 50.0%
TCCACTATTGCCGTTCGTTG+AGG - chr1.2:52864287-52864306 MS.gene038083:intron 50.0%
TCCAGGAATCTGTGAAGACC+AGG - chr1.2:52859789-52859808 MS.gene038083:CDS 50.0%
TCGGTGGTTGTGAATTGACG+TGG - chr1.2:52864427-52864446 MS.gene038083:intron 50.0%
TGAACTCTATGTGCGCCAGA+TGG + chr1.2:52865518-52865537 None:intergenic 50.0%
TGGATTGAGGGTTTAGGAGG+GGG + chr1.2:52864111-52864130 None:intergenic 50.0%
TGGTGGCAGAACAAAGTCGA+AGG - chr1.2:52862778-52862797 MS.gene038083:intron 50.0%
TGGTGTGTTCACCGTGATGA+GGG + chr1.2:52864944-52864963 None:intergenic 50.0%
TTGCCGTTCGTTGAGGTTTG+AGG - chr1.2:52864294-52864313 MS.gene038083:intron 50.0%
TTGTAACGACAGCATGGCAC+TGG - chr1.2:52864600-52864619 MS.gene038083:intron 50.0%
TTTCGCAAGGCCGAAGTCAA+TGG + chr1.2:52862253-52862272 None:intergenic 50.0%
! AGAGTACTCTCACTTCGTCC+TGG - chr1.2:52861524-52861543 MS.gene038083:intron 50.0%
! ATGGAGTGTTTAGGAGGGGA+GGG - chr1.2:52863233-52863252 MS.gene038083:intron 50.0%
! CAACGGCGTCATTTGATTCG+TGG - chr1.2:52861325-52861344 MS.gene038083:intron 50.0%
! CTCCAAACCATTTGAGGTGG+GGG + chr1.2:52859874-52859893 None:intergenic 50.0%
! GCTTTGAGCTCCTCACTATC+AGG - chr1.2:52865615-52865634 MS.gene038083:CDS 50.0%
AGAGGAGGTGGCTGTTAAGC+TGG - chr1.2:52859285-52859304 MS.gene038083:CDS 55.0%
AGGAGCTCAAAGCTCCTCAG+AGG + chr1.2:52865608-52865627 None:intergenic 55.0%
AGGTGACCATTCTGGCAGGA+TGG - chr1.2:52865475-52865494 MS.gene038083:intron 55.0%
CTAGAGCTGCCACTACTCTG+TGG + chr1.2:52864512-52864531 None:intergenic 55.0%
CTCTATGTGCGCCAGATGGA+CGG + chr1.2:52865514-52865533 None:intergenic 55.0%
CTGGAATCCCCCACCTCAAA+TGG - chr1.2:52859864-52859883 MS.gene038083:intron 55.0%
CTGGTGTGTTCACCGTGATG+AGG + chr1.2:52864945-52864964 None:intergenic 55.0%
CTTCCAGACTGGGTCCAAGA+AGG + chr1.2:52859928-52859947 None:intergenic 55.0%
GCTCGCAATGGGTCTATGAG+AGG - chr1.2:52865569-52865588 MS.gene038083:CDS 55.0%
GGGGCACAGATAGCTTAACG+TGG - chr1.2:52863996-52864015 MS.gene038083:intron 55.0%
TCCTCAGAGGATCATCACGG+TGG + chr1.2:52865595-52865614 None:intergenic 55.0%
TCTTCCCTGGCAAGGACTGA+GGG - chr1.2:52862932-52862951 MS.gene038083:intron 55.0%
TGAGGGTTTAGGAGGGGGAA+GGG + chr1.2:52864106-52864125 None:intergenic 55.0%
TGTTTAGGAGGGGAGGGGAA+GGG - chr1.2:52863239-52863258 MS.gene038083:intron 55.0%
TTGAGGGTTTAGGAGGGGGA+AGG + chr1.2:52864107-52864126 None:intergenic 55.0%
TTGTGGCCATCCTGCCAGAA+TGG + chr1.2:52865484-52865503 None:intergenic 55.0%
! CAGAGTAGTGGCAGCTCTAG+AGG - chr1.2:52864512-52864531 MS.gene038083:intron 55.0%
! GATGGAGTGTTTAGGAGGGG+AGG - chr1.2:52863232-52863251 MS.gene038083:intron 55.0%
! GCCTGGTCTTCACAGATTCC+TGG + chr1.2:52859793-52859812 None:intergenic 55.0%
! TGGAGTGTTTAGGAGGGGAG+GGG - chr1.2:52863234-52863253 MS.gene038083:intron 55.0%
!! GACGTGGGCATTGATCATGC+AGG - chr1.2:52864443-52864462 MS.gene038083:intron 55.0%
!! GTAGTGGCAGCTCTAGAGGA+CGG - chr1.2:52864516-52864535 MS.gene038083:intron 55.0%
!! TAGTGGCAGCTCTAGAGGAC+GGG - chr1.2:52864517-52864536 MS.gene038083:intron 55.0%
CATAGCGTGCCGTGCCTGTA+AGG + chr1.2:52862617-52862636 None:intergenic 60.0%
CCTCAGGTGACCATTCTGGC+AGG - chr1.2:52865471-52865490 MS.gene038083:intron 60.0%
CCTGCCAGAATGGTCACCTG+AGG + chr1.2:52865474-52865493 None:intergenic 60.0%
CGACCTTCTTGGACCCAGTC+TGG - chr1.2:52859922-52859941 MS.gene038083:intron 60.0%
CTGGCAGGATGGCCACAAGT+GGG - chr1.2:52865486-52865505 MS.gene038083:intron 60.0%
GCCACCGTGATGATCCTCTG+AGG - chr1.2:52865591-52865610 MS.gene038083:CDS 60.0%
GGTTTAGGAGGGGGAAGGGA+GGG + chr1.2:52864102-52864121 None:intergenic 60.0%
GTCTTCCCTGGCAAGGACTG+AGG - chr1.2:52862931-52862950 MS.gene038083:intron 60.0%
GTGTTTAGGAGGGGAGGGGA+AGG - chr1.2:52863238-52863257 MS.gene038083:intron 60.0%
GTTTAGGAGGGGGAAGGGAG+GGG + chr1.2:52864101-52864120 None:intergenic 60.0%
TCTGGCAGGATGGCCACAAG+TGG - chr1.2:52865485-52865504 MS.gene038083:intron 60.0%
TGGCAGGATGGCCACAAGTG+GGG - chr1.2:52865487-52865506 MS.gene038083:intron 60.0%
!! ACGACAGCATGGCACTGGCA+AGG - chr1.2:52864605-52864624 MS.gene038083:intron 60.0%
ACAAGTGGGGGCCGTCCATC+TGG - chr1.2:52865500-52865519 MS.gene038083:intron 65.0%
AGATGGACGGCCCCCACTTG+TGG + chr1.2:52865501-52865520 None:intergenic 65.0%
CCAGCCCTCAGTCCTTGCCA+GGG + chr1.2:52862939-52862958 None:intergenic 65.0%
GGCAGGATGGCCACAAGTGG+GGG - chr1.2:52865488-52865507 MS.gene038083:intron 65.0%
GGGTTTAGGAGGGGGAAGGG+AGG + chr1.2:52864103-52864122 None:intergenic 65.0%
TAGGAGGGGAGGGGAAGGGA+GGG - chr1.2:52863243-52863262 MS.gene038083:intron 65.0%
TCCAGCCCTCAGTCCTTGCC+AGG + chr1.2:52862940-52862959 None:intergenic 65.0%
TTAGGAGGGGAGGGGAAGGG+AGG - chr1.2:52863242-52863261 MS.gene038083:intron 65.0%
AGGAGGGGAGGGGAAGGGAG+GGG - chr1.2:52863244-52863263 MS.gene038083:intron 70.0%
AGGAGGGGGAAGGGAGGGGA+GGG + chr1.2:52864097-52864116 None:intergenic 70.0%
CCCTGGCAAGGACTGAGGGC+TGG - chr1.2:52862936-52862955 MS.gene038083:intron 70.0%
TAGGAGGGGGAAGGGAGGGG+AGG + chr1.2:52864098-52864117 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 52859084 52865643 52859084 ID=MS.gene038083
chr1.2 mRNA 52859084 52865643 52859084 ID=MS.gene038083.t1;Parent=MS.gene038083
chr1.2 exon 52865568 52865643 52865568 ID=MS.gene038083.t1.exon1;Parent=MS.gene038083.t1
chr1.2 CDS 52865568 52865643 52865568 ID=cds.MS.gene038083.t1;Parent=MS.gene038083.t1
chr1.2 exon 52865421 52865461 52865421 ID=MS.gene038083.t1.exon2;Parent=MS.gene038083.t1
chr1.2 CDS 52865421 52865461 52865421 ID=cds.MS.gene038083.t1;Parent=MS.gene038083.t1
chr1.2 exon 52864715 52864933 52864715 ID=MS.gene038083.t1.exon3;Parent=MS.gene038083.t1
chr1.2 CDS 52864715 52864933 52864715 ID=cds.MS.gene038083.t1;Parent=MS.gene038083.t1
chr1.2 exon 52864520 52864615 52864520 ID=MS.gene038083.t1.exon4;Parent=MS.gene038083.t1
chr1.2 CDS 52864520 52864615 52864520 ID=cds.MS.gene038083.t1;Parent=MS.gene038083.t1
chr1.2 exon 52862414 52862484 52862414 ID=MS.gene038083.t1.exon5;Parent=MS.gene038083.t1
chr1.2 CDS 52862414 52862484 52862414 ID=cds.MS.gene038083.t1;Parent=MS.gene038083.t1
chr1.2 exon 52862064 52862125 52862064 ID=MS.gene038083.t1.exon6;Parent=MS.gene038083.t1
chr1.2 CDS 52862064 52862125 52862064 ID=cds.MS.gene038083.t1;Parent=MS.gene038083.t1
chr1.2 exon 52861877 52861940 52861877 ID=MS.gene038083.t1.exon7;Parent=MS.gene038083.t1
chr1.2 CDS 52861877 52861940 52861877 ID=cds.MS.gene038083.t1;Parent=MS.gene038083.t1
chr1.2 exon 52861711 52861795 52861711 ID=MS.gene038083.t1.exon8;Parent=MS.gene038083.t1
chr1.2 CDS 52861711 52861795 52861711 ID=cds.MS.gene038083.t1;Parent=MS.gene038083.t1
chr1.2 exon 52860354 52860480 52860354 ID=MS.gene038083.t1.exon9;Parent=MS.gene038083.t1
chr1.2 CDS 52860354 52860480 52860354 ID=cds.MS.gene038083.t1;Parent=MS.gene038083.t1
chr1.2 exon 52860189 52860262 52860189 ID=MS.gene038083.t1.exon10;Parent=MS.gene038083.t1
chr1.2 CDS 52860189 52860262 52860189 ID=cds.MS.gene038083.t1;Parent=MS.gene038083.t1
chr1.2 exon 52860052 52860115 52860052 ID=MS.gene038083.t1.exon11;Parent=MS.gene038083.t1
chr1.2 CDS 52860052 52860115 52860052 ID=cds.MS.gene038083.t1;Parent=MS.gene038083.t1
chr1.2 exon 52859741 52859862 52859741 ID=MS.gene038083.t1.exon12;Parent=MS.gene038083.t1
chr1.2 CDS 52859741 52859862 52859741 ID=cds.MS.gene038083.t1;Parent=MS.gene038083.t1
chr1.2 exon 52859084 52859329 52859084 ID=MS.gene038083.t1.exon13;Parent=MS.gene038083.t1
chr1.2 CDS 52859084 52859329 52859084 ID=cds.MS.gene038083.t1;Parent=MS.gene038083.t1
Gene Sequence

>MS.gene038083

ATGGATCATGTGATTGGTGGAAAGTTTAAACTTGGAAGGAAAATTGGGAGTGGTTCTTTTGGAGAGCTCTATTTAGGTTTGTTCATCTTTATTCCCTTTTTTTTGTTTTTAATTCATTTATTTGGGTACATTGTATTGTTTTGTTAATATTAACATGTTCATTCTATTGTTTCTTATATCAGCTGTTAATATACAAACTGGAGAGGAGGTGGCTGTTAAGCTGGTATGTGAAGTTCTCTTCAATCATTTGACTCATTTTTATTTTTTATTGTTGAATTCTTTTATGAATTTCTAGAATTTGGTTGATTTTTTTTTTCATGTTGGTTCTAGATGTATTATTAGGATATTATCTGAACTATTTAGGGTCAATGATGATCCATGAAATTGAGCATGCTTGCGATATCATTTATCGAAGGAAATGGCATGAGATATGTTTTAAATGTTAACTTTTGGTCAATAGGTGGATGATTGGTTCTTGAAATGAGATGTGAAATGGCACATTATGTTTATCCTCACAATTCTGTTTTGCAGCTGCTAGATGCTCACTTCGTATCATATTTTTACAATACATTTTCTGTTGCATTGTTGATCACGTTTTGCTAGTTTGTGAAAGATTTTTTTTTTGTTATCAGTTAGTGGTGGCACTTCATGTGACACACTATGTTTTTCCAATTTCCAATTGTCTCACGGTTCTGTCAAAAATATTCCAGGAATCTGTGAAGACCAGGCATCCACAGCTTCACTATGAGTCAAAACTGTATATGATTCTTCAAGGAGGAACTGGAATCCCCCACCTCAAATGGTTTGGAGTTGAGGGAGAGTACAATGTCATGGTCATCGACCTTCTTGGACCCAGTCTGGAAGATTTATTCAATTATTGTAACCGGAAATTCACTTTGAAGTCGGTGTTGATGCTTGCCGATCAATTAGTAAGTCTGTCTGTCAAGTTGGCGAAAGTTATTTAATATGGTTCTTTATATAATGGTACTAATAGCTTATTTGCCTCACACTTTTGTTTGTTTTTTCAGATTAACAGAGTTGAATACATGCATTCAAGAGGCTTTCTTCACCGAGACATAAAGCCAGACAATTTTCTGATGGGCCTCGGACGTAAAGCAAATCAAGTATGCGATTATTGTCTGTTGAAGATTTCTTGTTTTTTTTTTTTTAATTCCTTTGTCTATTGTGGGTTCAATATGCCTTTTGAAAAGTTTGATAGAGGAGTATGGGAGAAGCCTAAATTATCTATATATGATTATTATTGACCTAGAAAAGAATTATGATAGGGTGTCTATAGACAAGTATAACACATGGTAGGGCCCATTTTAAGCTATTATGTTTTTTCTTTGGTATTAAATGTTCTTACTAGCATATCCAGGAGGTAACGCTGTCATATATTTTCTTGTGTGGGTTGTATGGTCATAGTTGAAGAGTCTAAATAGGAATAAATGGTAAACTAGAGTTGTGAAGAGAAGCTTAAAATCACATGATTTATGATTAAATATAAGAAAATCTTGGGAGTACATTTGTTGAGTCCCACATTGGATATGGTATGACCTGAATATTAAGAGGGGAATATTGGAGGTCATATTAATGCCACAACACAAGGTGCACAGTTTCGGCCCCTTGAATCTATCATACCAAGCGACGAAGAAATGGAGAAAGATATAAATCGTAGGATTCAAGTGAGTTGGATGAAATGGAGAAATATTTCAGTTATTTGTGTTTGAAAGGTACCTCTCAAAAGTTTGAAGGAAATAAAGTTCCAACAAGAGAAGTCAAGTGTTTTAGAGATGAGAATTTTGCAGGGGATGAGTGGACATACAAGAAAAGATATGATTGTGCAATGGAATAACACCTGTCAAGACTACGAATTTACAACCCAAGAGAGAGTAGGAAAAACACTTATTACCGAAAAAATGATAGAATCTTGTCTAACATGTGAGGAGTCTAATAGAAACCCTGGTAAAAAAAGTTGATGTTAGAAACCTTGAAAAGAACTGAGCAACAGAAAAGATGATTTTTATTGATTGAATTGAACTGAGTATATAGTTAGTGATTCAATAATAGCATCTACAGTTTCTGTATTATATTGATATTGATAGCGGCACTTCTACTTGTATCTGTTAGACATGTTAGATTCCGTTACATAGTGCAATCAAGCAACTGCAAGCTAGTCAGGTTCTTTAACTAACATTTTAGTTGCAATCAAGCAGCTGCAAGTTAGTTTTTGACAGAATGCAACGGCGTCATTTGATTCGTGGTTTTAATGGTTGTGTAGTTTGGATGATTTTGGTTTTTATTTTCCTGTCTTTGATATAAATAAAGAGTTACCCATTATAATGAGTCTTCGGCATTCAATGACATCAAAATACAAGCTTGGTTGAGTAACATTTGAATTGGCAGTGTCCTGTTTCCATGTTTGTCCTTGAGTTTTTCAAGAGTACTCTCACTTCGTCCTGGACCTTTCCTTTAAAATCCTAAGTTCACCAGTCATTTTGCTTATTTTCATATCACGTCTATTGGTTTACTTCATAATCTATCATAGTAATATTTACTTTTTGGGAGGGTGTGTTTCTCCTTTAGTTCAATGACTTACGCTGTAGATACTGTTGCCGTTCATAGCATAGATCCCTGCACGACAAATTTAGGAAATAAATGTACTGCCCTTGAGTATAATGTTGAGTTGGTCTTACTTGAGAAAATGTCTGCTTTGACATGTGCACACATTTTGGCATGCAAGTGACTTTATGTTGGTATCAGTTTATTAATTTCATCGTGGCATACCAACCATACAGTGCTAATTATAACATGATTAACTTCTAGTGAGACTAGATTACCTAGCGTTAACACGATAAAATGAAGCCTAAACTTAACCGTTTGTATCCTTTAAAAGACTTCATTTTGTAGTCTCCTTGTTGGTCAAAGCAATTGGTTTCTTTAAGGGTGGGAATTTCTTAATCGTTGGATATGCTAAGTTTGTACAGCACGTTGAGTTAATATTCTTTCCATTTTTTATTTTATTTTATGGATGTTATAGGAGTGTTTCTGTTTGTCTATCTTTTATTTCAATTTTTTATTTATTTTAATAAATTTTTATTCTCTTGTCCAAAACTAAATATAATCGACTGATACATCACACTCTGTATCTCATTTCAGGTGTATGCCATTGACTTCGGCCTTGCGAAAAAATATAGGGATCTTCAGACTCATAGGCACATACCGTACAGGTTGGTTTTGTGATCATAATTTTAGGAGGGAGCAATATTAGGTTAAGCTAAACAATTAGGCAAACTAAACCTTATATTGCTTAATAATTGCTTAGTTTTTTTTAATTTTTTTTTCTACGCATTTGCATCCCTTTAACAGGCTGTTATGCCATTTTTTTTACTGGAAATCACTACCTAAATGTAGATAATATTTTAGTATACTTTAACTAAAACAATATCAAACTTGGTCCCACAAATTCCCATTGATCTCAATATATTTTGTAAGTGATATTTTTCTTCTTTGCTTAGGGAAAATAAGAACCTTACAGGCACGGCACGCTATGCAAGTGTCAACACCCATCTTGGAATCGGTAAGTGATATTTTATGCTGGTTTGTTACTTTCTCGGTTAGGACTATTCAGTTCAAAATGAATTATTACATTATTAGGACTGAATGTGTTTTCTATATACTAATTGTGTGATTGTGGTGGCAGAACAAAGTCGAAGGGATGATCTGGAATCTCTTGGTTATGTGCTAATGTATTTCTTAAGAGGAAGGTTAGTTAATTGACAAACGTATCTACAACTTTATAGTTTATTCACACTATCAACTTTGTTTCATACTTTTTCCTTTTTCAGTCTTCCCTGGCAAGGACTGAGGGCTGGAAACAAAAAGCAAAAATACGATAAAATCAGTGAGACGAAGGTATCAACTCCAATAGAGGTAATTATGACTTGACTTCCTGCATCTGTCAGTTTTTTTTTTTTTTTTTTATATTTTTTTAATGAAATTAAATTAATACCAGTTATTGAGCACTATTGCATGTTTCTTGTTTATTAGAAATTGGAATTAACTAAACACTCTCAAGTTGATGTTTGCTTTTTTAATTATTTACCTATATTTCCTGCATTCAACTGTTAGCACTTAGGGTGTGTTTGGATGGAGTGTTTAGGAGGGGAGGGGAAGGGAGGGGAGAGTTTACTTTTCATTTTTAAATTACGGACACTATGAAATGTTTTTTTTAAAAAGTTAACATATTAACATGATAAACGATCATGTAATATTTCAATCACACTCAGTGGCGTAGCCAGAAACTTTGAATAGTGGGGGCACTATATATAAATTTGTAGCATAGCCATCATCTTAAATAATTTGGATCTTAAACAATATAGACGTCGATGTACAATACTAACTTAGAGGTCGATACCAATTTAGAGTTGTCATTTTGGTCTCTAAATATATGGCGTGTTATCACTAAAATATTTGAATTTTATCAAAACTATGAGCATATCTTCAAATGTTTCATTTGTTATTAATTGTATAGACCAAATTGATTAGTGAAAAATATATATAAAGATTAACTTAGCTAACTAAAGACACATTTAAAAATTAAAATGACTAATAAAAACTAAGGTTTGTTTTTGGTAATTTTAATAGAAATTATTAATAACCCATTTTAATTCAAAACCTTCAAGTTTTTCCATAATATAACATTACATAATCATCATACATTAATTATTAGGAAAATGAAACCAACACAACAGAAAGTGTTGAGAGATGCAGCCAAGCGTTTTTGTTTAAAGGCTCCATAACATCTTTAGGAATGCTTGGTAAAACTTTTTACTAAATATTATACATAAATATATAATATATGTATTAGTGTGTATATATGTAATGCATGAAGCAACTTTCAAAAATTAGTGGGGCACAGATAGCTTAACGTGGCTCCGCCACTGATCACACTTAATTTATTTTAGAAAAACATGTTCTATAGTCCGTAATTTGAAAAAGAAAAGTAAACCCTCCCCTCCCTTCCCCCTCCTAAACCCTCAATCCAAACACACCCTAAAATGTTATTTTCATAAAACTTTCCTCTTCATTTCCCTTCTGTCTCATGTAAAATCTTAATTTTATCGCTCTTGTTGATAGAATTACGTGCTTTTATAAAAATAGGTGCTCTGTAAATCATATCCCTCTGAGTTTGTATCATACTTCCACTATTGCCGTTCGTTGAGGTTTGAGGACAAACCAGATTATTCATATTTAAAGAGACTTTTCCGAGACCTTTTTATTCGAGAAGGTATGTTACCCAAAATAATGTGGAAAATGCATTCAGTATATTTTGCTGGAAATTCGGTGGTTGTGAATTGACGTGGGCATTGATCATGCAGGCTATCAATTTGACTATGTTTTTGACTGGACTGTATTGAAGTATCCACAGAGTAGTGGCAGCTCTAGAGGACGGGTTAGTATTTTATCTATAGATCTTGTTGTTTTACATTTTTGTTGGTCGCTTACTGTGGTTGTTGTAACGACAGCATGGCACTGGCAAGGCAGCTATGCATGCAGCTACACCAGTACATAAAGCACAAAAGATTCCAGGTCTGTTGTCTTTCAGCTGAATAAGAATGAAATTCGGTATCCTGCTAATATGTGCTGTGACAGAAAATAAATGTTTGAACTGAAAGCATTCAACTGAAGTTATCTTTTTCGTTGTTCTCATCAATAGTAAAAATATTGTACTGTTTTCAAAGTCTGTTGTATAATATTTGTTCATGCTATTTGTTTCAGTTGGGAGAGAGATTCGGGAGAAATTATCTGGTGCTGTTGTTGAAGCATTCACCCAGAGGAACCGCGCAAATTCTAGCCCTCATCACGGTGAACACACCAGACATAGGACTTATGATGATGTGGTAATACTCTTTCACAACAATAAGAATTTTTAAATCATCATATGAAGTTTTCAAATGAGAATGTTGTTTCCTGTTTGGTTTGACAAGACGTTTTCTAGTTCCATTTCATGTTTTTTCACATAATTACAAAAATGTCCCTTTTTTTTACCTTGTTTACCATTTGTAAATATTTGTACTAGAAATTATAAGCACGATAAAATATTGCTTTCACCGTTTTATTTACAAATCTAAAAATTAAGTAATGAAGTGAAAGAAAACAAGTCTGTTTTTAATAATTTACAATGAGAACAGAAAGTGTTTTGTCAAATCAAACAAACGTATTCTCTTAATATTTAGTCAAGTCTTGAGTGTAACTATGCATTTGTTTATTGAGTTATTATTCTTATGTTTAACGTTATCTTATATTAACAGCACTATGCCCAACACAATTCAACTCGATATGGAAGCAGTTCAAGAAGAGCCATGGTATCATCAAAGCCAAATTCCTCAGGTGACCATTCTGGCAGGATGGCCACAAGTGGGGGCCGTCCATCTGGCGCACATAGAGTTCAACCTGTGTATGATACGAAACAAGCAACTTTTGCTCGCAATGGGTCTATGAGAGGCCACCGTGATGATCCTCTGAGGAGCTTTGAGCTCCTCACTATCAGGAAGTAA

Protein sequence

>MS.gene038083.t1

MDHVIGGKFKLGRKIGSGSFGELYLAVNIQTGEEVAVKLESVKTRHPQLHYESKLYMILQGGTGIPHLKWFGVEGEYNVMVIDLLGPSLEDLFNYCNRKFTLKSVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYAIDFGLAKKYRDLQTHRHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLRAGNKKQKYDKISETKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTVLKYPQSSGSSRGRHGTGKAAMHAATPVHKAQKIPVGREIREKLSGAVVEAFTQRNRANSSPHHGEHTRHRTYDDVHYAQHNSTRYGSSSRRAMVSSKPNSSGDHSGRMATSGGRPSGAHRVQPVYDTKQATFARNGSMRGHRDDPLRSFELLTIRK