Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038083.t1 | XP_013468459.1 | 97.6 | 454 | 5 | 1 | 1 | 448 | 1 | 454 | 8.60E-258 | 899 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038083.t1 | Q8LPJ1 | 72.6 | 478 | 98 | 11 | 1 | 448 | 5 | 479 | 6.8e-187 | 654.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038083.t1 | A0A072VLK3 | 97.6 | 454 | 5 | 1 | 1 | 448 | 1 | 454 | 6.2e-258 | 899.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene52398 | MS.gene038083 | PPI |
MS.gene004548 | MS.gene038083 | PPI |
MS.gene00289 | MS.gene038083 | PPI |
MS.gene68906 | MS.gene038083 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038083.t1 | MTR_1g069720 | 97.577 | 454 | 5 | 1 | 1 | 448 | 1 | 454 | 0.0 | 919 |
MS.gene038083.t1 | MTR_7g097160 | 78.065 | 465 | 83 | 7 | 1 | 448 | 1 | 463 | 0.0 | 726 |
MS.gene038083.t1 | MTR_1g075870 | 71.304 | 460 | 115 | 6 | 1 | 446 | 2 | 458 | 0.0 | 641 |
MS.gene038083.t1 | MTR_1g042280 | 71.145 | 454 | 120 | 5 | 1 | 446 | 2 | 452 | 0.0 | 632 |
MS.gene038083.t1 | MTR_1g075870 | 84.098 | 327 | 51 | 1 | 1 | 327 | 2 | 327 | 0.0 | 585 |
MS.gene038083.t1 | MTR_2g099670 | 65.358 | 433 | 114 | 8 | 1 | 425 | 1 | 405 | 0.0 | 551 |
MS.gene038083.t1 | MTR_4g126010 | 72.222 | 360 | 87 | 4 | 1 | 347 | 1 | 360 | 0.0 | 545 |
MS.gene038083.t1 | MTR_8g018310 | 59.958 | 472 | 154 | 10 | 1 | 444 | 1 | 465 | 0.0 | 540 |
MS.gene038083.t1 | MTR_8g018310 | 79.167 | 312 | 64 | 1 | 1 | 312 | 1 | 311 | 0.0 | 533 |
MS.gene038083.t1 | MTR_2g039930 | 55.274 | 474 | 176 | 6 | 1 | 447 | 1 | 465 | 0.0 | 516 |
MS.gene038083.t1 | MTR_0492s0030 | 68.011 | 372 | 110 | 4 | 1 | 370 | 1 | 365 | 0.0 | 515 |
MS.gene038083.t1 | MTR_0543s0020 | 68.011 | 372 | 110 | 4 | 1 | 370 | 1 | 365 | 0.0 | 515 |
MS.gene038083.t1 | MTR_1g042280 | 89.474 | 266 | 28 | 0 | 40 | 305 | 9 | 274 | 0.0 | 513 |
MS.gene038083.t1 | MTR_6g087070 | 76.797 | 306 | 71 | 0 | 1 | 306 | 1 | 306 | 3.19e-179 | 508 |
MS.gene038083.t1 | MTR_8g102930 | 77.181 | 298 | 68 | 0 | 1 | 298 | 1 | 298 | 3.98e-177 | 502 |
MS.gene038083.t1 | MTR_1g075870 | 81.295 | 278 | 50 | 2 | 57 | 334 | 1 | 276 | 2.24e-171 | 482 |
MS.gene038083.t1 | MTR_3g110180 | 55.582 | 421 | 171 | 4 | 1 | 417 | 1 | 409 | 3.88e-164 | 469 |
MS.gene038083.t1 | MTR_3g110180 | 55.582 | 421 | 170 | 5 | 1 | 417 | 1 | 408 | 1.24e-162 | 466 |
MS.gene038083.t1 | MTR_1g004990 | 70.508 | 295 | 87 | 0 | 1 | 295 | 1 | 295 | 1.71e-162 | 465 |
MS.gene038083.t1 | MTR_2g099670 | 63.441 | 372 | 100 | 8 | 62 | 425 | 10 | 353 | 1.26e-157 | 452 |
MS.gene038083.t1 | MTR_7g097160 | 71.118 | 322 | 74 | 7 | 144 | 448 | 25 | 344 | 4.31e-154 | 441 |
MS.gene038083.t1 | MTR_2g039930 | 52.926 | 393 | 149 | 6 | 82 | 447 | 1 | 384 | 4.22e-136 | 397 |
MS.gene038083.t1 | MTR_7g006030 | 37.716 | 289 | 161 | 6 | 5 | 277 | 31 | 316 | 1.21e-57 | 200 |
MS.gene038083.t1 | MTR_3g110240 | 37.276 | 279 | 162 | 6 | 5 | 273 | 115 | 390 | 2.96e-54 | 192 |
MS.gene038083.t1 | MTR_7g085540 | 36.525 | 282 | 163 | 5 | 9 | 277 | 147 | 425 | 4.43e-54 | 192 |
MS.gene038083.t1 | MTR_1g007150 | 36.918 | 279 | 163 | 6 | 5 | 273 | 118 | 393 | 4.95e-54 | 191 |
MS.gene038083.t1 | MTR_1g116210 | 36.268 | 284 | 167 | 6 | 5 | 277 | 113 | 393 | 1.45e-53 | 190 |
MS.gene038083.t1 | MTR_8g014050 | 36.170 | 282 | 158 | 7 | 9 | 273 | 128 | 404 | 1.26e-49 | 179 |
MS.gene038083.t1 | MTR_7g116400 | 62.687 | 67 | 24 | 1 | 80 | 145 | 1 | 67 | 9.55e-21 | 86.7 |
MS.gene038083.t1 | MTR_7g106710 | 29.167 | 216 | 131 | 9 | 9 | 215 | 135 | 337 | 2.98e-14 | 74.7 |
MS.gene038083.t1 | MTR_5g007590 | 45.333 | 75 | 33 | 1 | 71 | 145 | 53 | 119 | 3.62e-14 | 69.7 |
MS.gene038083.t1 | MTR_5g022030 | 26.818 | 220 | 144 | 6 | 8 | 219 | 98 | 308 | 4.06e-14 | 74.7 |
MS.gene038083.t1 | MTR_5g022030 | 26.818 | 220 | 144 | 6 | 8 | 219 | 98 | 308 | 4.77e-14 | 74.7 |
MS.gene038083.t1 | MTR_7g106710 | 29.167 | 216 | 131 | 9 | 9 | 215 | 135 | 337 | 6.77e-14 | 73.9 |
MS.gene038083.t1 | MTR_7g106710 | 29.167 | 216 | 131 | 9 | 9 | 215 | 135 | 337 | 7.40e-14 | 73.9 |
MS.gene038083.t1 | MTR_4g128820 | 29.630 | 216 | 128 | 7 | 7 | 213 | 8 | 208 | 8.37e-14 | 73.6 |
MS.gene038083.t1 | MTR_7g106710 | 29.167 | 216 | 131 | 9 | 9 | 215 | 135 | 337 | 1.19e-13 | 73.6 |
MS.gene038083.t1 | MTR_3g466480 | 29.817 | 218 | 133 | 9 | 5 | 214 | 17 | 222 | 1.11e-12 | 70.1 |
MS.gene038083.t1 | MTR_7g073520 | 34.375 | 128 | 70 | 4 | 109 | 236 | 252 | 365 | 2.51e-12 | 68.9 |
MS.gene038083.t1 | MTR_1g026190 | 28.030 | 264 | 151 | 10 | 9 | 251 | 78 | 323 | 3.90e-12 | 68.6 |
MS.gene038083.t1 | MTR_5g092815 | 26.609 | 233 | 148 | 8 | 9 | 233 | 91 | 308 | 9.31e-12 | 67.0 |
MS.gene038083.t1 | MTR_7g106730 | 26.522 | 230 | 142 | 8 | 9 | 228 | 88 | 300 | 9.41e-12 | 67.0 |
MS.gene038083.t1 | MTR_3g099920 | 28.017 | 232 | 107 | 9 | 9 | 213 | 19 | 217 | 3.30e-11 | 65.5 |
MS.gene038083.t1 | MTR_5g092810 | 27.488 | 211 | 137 | 6 | 9 | 213 | 92 | 292 | 3.68e-11 | 65.5 |
MS.gene038083.t1 | MTR_8g079790 | 27.948 | 229 | 139 | 10 | 6 | 219 | 122 | 339 | 4.06e-11 | 65.5 |
MS.gene038083.t1 | MTR_1g098300 | 28.302 | 212 | 127 | 9 | 9 | 209 | 126 | 323 | 4.53e-11 | 65.5 |
MS.gene038083.t1 | MTR_4g132860 | 25.887 | 282 | 179 | 10 | 11 | 281 | 82 | 344 | 6.35e-11 | 64.3 |
MS.gene038083.t1 | MTR_8g099095 | 29.437 | 231 | 134 | 11 | 9 | 228 | 66 | 278 | 8.95e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038083.t1 | AT4G28540 | 72.594 | 478 | 98 | 11 | 1 | 448 | 5 | 479 | 0.0 | 679 |
MS.gene038083.t1 | AT4G14340 | 70.861 | 453 | 116 | 7 | 1 | 446 | 7 | 450 | 0.0 | 642 |
MS.gene038083.t1 | AT3G23340 | 71.938 | 449 | 110 | 7 | 1 | 446 | 1 | 436 | 0.0 | 642 |
MS.gene038083.t1 | AT1G03930 | 68.354 | 474 | 121 | 8 | 1 | 448 | 1 | 471 | 0.0 | 626 |
MS.gene038083.t1 | AT5G43320 | 67.579 | 475 | 124 | 7 | 1 | 446 | 1 | 474 | 0.0 | 625 |
MS.gene038083.t1 | AT3G23340 | 69.265 | 449 | 108 | 8 | 1 | 446 | 1 | 422 | 0.0 | 608 |
MS.gene038083.t1 | AT1G04440 | 66.164 | 464 | 137 | 8 | 1 | 446 | 1 | 462 | 0.0 | 599 |
MS.gene038083.t1 | AT5G44100 | 82.000 | 350 | 58 | 2 | 1 | 346 | 1 | 349 | 0.0 | 597 |
MS.gene038083.t1 | AT5G44100 | 82.000 | 350 | 58 | 2 | 1 | 346 | 1 | 349 | 0.0 | 597 |
MS.gene038083.t1 | AT4G14340 | 83.537 | 328 | 53 | 1 | 1 | 328 | 7 | 333 | 0.0 | 576 |
MS.gene038083.t1 | AT5G43320 | 81.024 | 332 | 60 | 1 | 1 | 329 | 1 | 332 | 0.0 | 565 |
MS.gene038083.t1 | AT5G43320 | 81.024 | 332 | 60 | 1 | 1 | 329 | 1 | 332 | 0.0 | 565 |
MS.gene038083.t1 | AT1G72710 | 75.152 | 330 | 79 | 2 | 1 | 328 | 1 | 329 | 0.0 | 536 |
MS.gene038083.t1 | AT4G26100 | 80.872 | 298 | 57 | 0 | 1 | 298 | 1 | 298 | 0.0 | 535 |
MS.gene038083.t1 | AT5G57015 | 80.537 | 298 | 58 | 0 | 1 | 298 | 1 | 298 | 0.0 | 529 |
MS.gene038083.t1 | AT2G19470 | 73.556 | 329 | 84 | 3 | 1 | 326 | 1 | 329 | 0.0 | 524 |
MS.gene038083.t1 | AT4G28880 | 71.160 | 319 | 92 | 0 | 1 | 319 | 1 | 319 | 7.36e-176 | 499 |
MS.gene038083.t1 | AT4G28880 | 71.160 | 319 | 92 | 0 | 1 | 319 | 1 | 319 | 7.36e-176 | 499 |
MS.gene038083.t1 | AT4G28880 | 71.160 | 319 | 92 | 0 | 1 | 319 | 1 | 319 | 7.36e-176 | 499 |
MS.gene038083.t1 | AT4G28880 | 71.160 | 319 | 92 | 0 | 1 | 319 | 1 | 319 | 7.36e-176 | 499 |
MS.gene038083.t1 | AT4G28860 | 70.533 | 319 | 94 | 0 | 1 | 319 | 1 | 319 | 1.04e-174 | 494 |
MS.gene038083.t1 | AT4G28860 | 74.832 | 298 | 75 | 0 | 1 | 298 | 1 | 298 | 1.94e-174 | 495 |
MS.gene038083.t1 | AT4G08800 | 66.216 | 296 | 68 | 2 | 1 | 296 | 1 | 264 | 3.59e-145 | 416 |
MS.gene038083.t1 | AT2G25760 | 39.286 | 280 | 155 | 4 | 9 | 273 | 107 | 386 | 7.13e-59 | 204 |
MS.gene038083.t1 | AT2G25760 | 38.929 | 280 | 153 | 5 | 9 | 273 | 107 | 383 | 3.77e-56 | 197 |
MS.gene038083.t1 | AT3G13670 | 35.986 | 289 | 166 | 6 | 5 | 277 | 131 | 416 | 3.59e-53 | 189 |
MS.gene038083.t1 | AT5G18190 | 35.461 | 282 | 166 | 5 | 9 | 277 | 130 | 408 | 1.80e-52 | 187 |
MS.gene038083.t1 | AT5G18190 | 35.461 | 282 | 166 | 5 | 9 | 277 | 130 | 408 | 1.80e-52 | 187 |
MS.gene038083.t1 | AT3G03940 | 35.461 | 282 | 166 | 5 | 9 | 277 | 140 | 418 | 4.55e-52 | 186 |
MS.gene038083.t1 | AT3G50530 | 28.319 | 226 | 141 | 7 | 5 | 219 | 144 | 359 | 1.09e-13 | 73.6 |
MS.gene038083.t1 | AT5G21326 | 29.870 | 231 | 113 | 10 | 7 | 214 | 11 | 215 | 3.36e-13 | 71.6 |
MS.gene038083.t1 | AT3G20410 | 28.384 | 229 | 143 | 8 | 9 | 230 | 91 | 305 | 5.44e-12 | 68.2 |
MS.gene038083.t1 | AT3G20410 | 28.384 | 229 | 143 | 8 | 9 | 230 | 91 | 305 | 5.44e-12 | 68.2 |
MS.gene038083.t1 | AT2G17890 | 25.909 | 220 | 146 | 7 | 8 | 219 | 107 | 317 | 5.73e-12 | 68.2 |
MS.gene038083.t1 | AT1G30270 | 27.386 | 241 | 147 | 10 | 7 | 236 | 29 | 252 | 6.30e-12 | 67.8 |
MS.gene038083.t1 | AT1G30270 | 27.386 | 241 | 147 | 10 | 7 | 236 | 29 | 252 | 6.46e-12 | 67.8 |
MS.gene038083.t1 | AT2G38910 | 28.063 | 253 | 144 | 10 | 1 | 230 | 119 | 356 | 1.06e-11 | 67.4 |
MS.gene038083.t1 | AT3G50530 | 26.104 | 249 | 148 | 9 | 5 | 219 | 144 | 390 | 1.41e-11 | 67.0 |
MS.gene038083.t1 | AT4G36070 | 25.000 | 220 | 148 | 6 | 8 | 219 | 70 | 280 | 1.47e-11 | 67.0 |
MS.gene038083.t1 | AT4G36070 | 25.000 | 220 | 148 | 6 | 8 | 219 | 70 | 280 | 1.79e-11 | 66.6 |
MS.gene038083.t1 | AT3G61960 | 24.843 | 318 | 204 | 10 | 7 | 318 | 8 | 296 | 1.88e-11 | 66.6 |
MS.gene038083.t1 | AT3G61960 | 24.843 | 318 | 204 | 10 | 7 | 318 | 8 | 296 | 2.01e-11 | 66.6 |
MS.gene038083.t1 | AT4G31170 | 28.319 | 226 | 128 | 8 | 8 | 218 | 130 | 336 | 2.84e-11 | 65.5 |
MS.gene038083.t1 | AT4G31170 | 28.319 | 226 | 128 | 8 | 8 | 218 | 130 | 336 | 2.84e-11 | 65.5 |
MS.gene038083.t1 | AT4G31170 | 28.319 | 226 | 128 | 8 | 8 | 218 | 130 | 336 | 2.84e-11 | 65.5 |
MS.gene038083.t1 | AT4G31170 | 28.319 | 226 | 128 | 8 | 8 | 218 | 130 | 336 | 2.84e-11 | 65.5 |
MS.gene038083.t1 | AT4G31170 | 28.319 | 226 | 128 | 8 | 8 | 218 | 130 | 336 | 2.84e-11 | 65.5 |
MS.gene038083.t1 | AT4G31170 | 28.319 | 226 | 128 | 8 | 8 | 218 | 130 | 336 | 2.84e-11 | 65.5 |
MS.gene038083.t1 | AT4G31170 | 28.319 | 226 | 128 | 8 | 8 | 218 | 130 | 336 | 2.84e-11 | 65.5 |
MS.gene038083.t1 | AT1G29230 | 27.397 | 219 | 141 | 9 | 2 | 213 | 67 | 274 | 2.89e-11 | 65.9 |
MS.gene038083.t1 | AT1G01140 | 28.689 | 244 | 140 | 13 | 7 | 236 | 17 | 240 | 3.10e-11 | 65.5 |
MS.gene038083.t1 | AT1G01140 | 28.689 | 244 | 140 | 13 | 7 | 236 | 17 | 240 | 3.30e-11 | 65.5 |
MS.gene038083.t1 | AT1G50700 | 25.597 | 293 | 192 | 10 | 9 | 293 | 73 | 347 | 4.34e-11 | 65.1 |
MS.gene038083.t1 | AT1G76040 | 27.586 | 232 | 147 | 8 | 9 | 233 | 112 | 329 | 4.63e-11 | 65.1 |
MS.gene038083.t1 | AT1G76040 | 28.037 | 214 | 136 | 7 | 9 | 215 | 112 | 314 | 4.65e-11 | 65.5 |
MS.gene038083.t1 | AT4G23650 | 29.167 | 216 | 131 | 7 | 9 | 215 | 78 | 280 | 6.32e-11 | 64.7 |
MS.gene038083.t1 | AT1G50700 | 25.597 | 293 | 192 | 10 | 9 | 293 | 73 | 347 | 6.52e-11 | 64.7 |
MS.gene038083.t1 | AT4G04720 | 23.052 | 308 | 201 | 9 | 2 | 293 | 66 | 353 | 8.04e-11 | 64.3 |
MS.gene038083.t1 | AT4G04720 | 23.052 | 308 | 201 | 9 | 2 | 293 | 66 | 353 | 8.04e-11 | 64.3 |
MS.gene038083.t1 | AT1G50700 | 25.357 | 280 | 184 | 9 | 9 | 281 | 73 | 334 | 8.91e-11 | 64.3 |
Find 121 sgRNAs with CRISPR-Local
Find 414 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTAAACTTGGAAGGAAAAT+TGG | 0.141980 | 1.2:-52865597 | MS.gene038083:CDS |
TAGAATTTGCGCGGTTCCTC+TGG | 0.208716 | 1.2:+52859788 | None:intergenic |
GAATGGTCACCTGAGGAATT+TGG | 0.252408 | 1.2:+52859241 | None:intergenic |
CCGACTTCAAAGTGAATTTC+CGG | 0.284081 | 1.2:+52864738 | None:intergenic |
ACATACCTTCTCGAATAAAA+AGG | 0.309439 | 1.2:+52860348 | None:intergenic |
CTCTTTAAATATGAATAATC+TGG | 0.309704 | 1.2:+52860383 | None:intergenic |
CAAGTCATAATTACCTCTAT+TGG | 0.319914 | 1.2:+52861697 | None:intergenic |
AAAATTGGGAGTGGTTCTTT+TGG | 0.322856 | 1.2:-52865582 | MS.gene038083:CDS |
TTCAGTTGGGAGAGAGATTC+GGG | 0.329420 | 1.2:-52859845 | MS.gene038083:intron |
CAACACAATTCAACTCGATA+TGG | 0.357353 | 1.2:-52859298 | MS.gene038083:CDS |
CATAGCGTGCCGTGCCTGTA+AGG | 0.359631 | 1.2:+52862091 | None:intergenic |
AATTCCTCAGGTGACCATTC+TGG | 0.359748 | 1.2:-52859238 | MS.gene038083:CDS |
ATTTATTCAATTATTGTAAC+CGG | 0.360177 | 1.2:-52864757 | MS.gene038083:CDS |
GTGCTAATGTATTTCTTAAG+AGG | 0.362458 | 1.2:-52861880 | MS.gene038083:CDS |
TTAAACTTGGAAGGAAAATT+GGG | 0.363410 | 1.2:-52865596 | MS.gene038083:CDS |
TCCAGCCCTCAGTCCTTGCC+AGG | 0.368539 | 1.2:+52861768 | None:intergenic |
AGGGAAAATAAGAACCTTAC+AGG | 0.372840 | 1.2:-52862105 | MS.gene038083:CDS |
TTTCAGTTGGGAGAGAGATT+CGG | 0.379707 | 1.2:-52859846 | MS.gene038083:intron |
GTCATGGTCATCGACCTTCT+TGG | 0.387600 | 1.2:-52864794 | MS.gene038083:CDS |
CGACCTTCTTGGACCCAGTC+TGG | 0.390528 | 1.2:-52864783 | MS.gene038083:CDS |
ATGATTCTTCAAGGAGGAAC+TGG | 0.404829 | 1.2:-52864860 | MS.gene038083:CDS |
ACCTCAACGAACGGCAATAG+TGG | 0.405356 | 1.2:+52860417 | None:intergenic |
CCTCAACTCCAAACCATTTG+AGG | 0.409202 | 1.2:+52864828 | None:intergenic |
GCTTTGAGCTCCTCACTATC+AGG | 0.414666 | 1.2:-52859090 | MS.gene038083:CDS |
GAGATTCGGGAGAAATTATC+TGG | 0.415618 | 1.2:-52859832 | MS.gene038083:CDS |
CTCAAATGGTTTGGAGTTGA+GGG | 0.423483 | 1.2:-52864827 | MS.gene038083:CDS |
TCAGCTGTTAATATACAAAC+TGG | 0.426788 | 1.2:-52865443 | MS.gene038083:intron |
GCAAGTGTCAACACCCATCT+TGG | 0.433561 | 1.2:-52862069 | MS.gene038083:CDS |
ATAGGGATCTTCAGACTCAT+AGG | 0.434481 | 1.2:-52862428 | MS.gene038083:CDS |
TTTATCATGGATCATGTGAT+TGG | 0.443086 | 1.2:-52865627 | None:intergenic |
CCTCAAATGGTTTGGAGTTG+AGG | 0.448526 | 1.2:-52864828 | MS.gene038083:CDS |
TTGCCGTTCGTTGAGGTTTG+AGG | 0.451388 | 1.2:-52860411 | MS.gene038083:CDS |
ATATCGAGTTGAATTGTGTT+GGG | 0.458129 | 1.2:+52859300 | None:intergenic |
ACAAAGTCGAAGGGATGATC+TGG | 0.458546 | 1.2:-52861917 | MS.gene038083:CDS |
TTTCGCAAGGCCGAAGTCAA+TGG | 0.458863 | 1.2:+52862455 | None:intergenic |
ATTGAATAAATCTTCCAGAC+TGG | 0.465309 | 1.2:+52864769 | None:intergenic |
CATAAAGCACAAAAGATTCC+AGG | 0.469567 | 1.2:-52860051 | MS.gene038083:intron |
AAACTGTATATGATTCTTCA+AGG | 0.471640 | 1.2:-52864869 | MS.gene038083:CDS |
GTGGAAAGTTTAAACTTGGA+AGG | 0.472881 | 1.2:-52865605 | MS.gene038083:CDS |
CTCCAAACCATTTGAGGTGG+GGG | 0.473526 | 1.2:+52864834 | None:intergenic |
GGCAGGATGGCCACAAGTGG+GGG | 0.486821 | 1.2:-52859217 | MS.gene038083:CDS |
ATAGTGAAGCTGTGGATGCC+TGG | 0.493685 | 1.2:+52864898 | None:intergenic |
TCTTCCCTGGCAAGGACTGA+GGG | 0.499281 | 1.2:-52861773 | MS.gene038083:CDS |
TTGTGGCCATCCTGCCAGAA+TGG | 0.501550 | 1.2:+52859224 | None:intergenic |
CCCTGGCAAGGACTGAGGGC+TGG | 0.502421 | 1.2:-52861769 | MS.gene038083:CDS |
GTCAACACCCATCTTGGAAT+CGG | 0.505171 | 1.2:-52862063 | MS.gene038083:intron |
ATCATCATAAGTCCTATGTC+TGG | 0.505727 | 1.2:+52859744 | None:intergenic |
CATATCGAGTTGAATTGTGT+TGG | 0.505789 | 1.2:+52859299 | None:intergenic |
ATTGGTGGAAAGTTTAAACT+TGG | 0.508093 | 1.2:-52865609 | MS.gene038083:CDS |
AGAGGAGGTGGCTGTTAAGC+TGG | 0.511655 | 1.2:-52865420 | MS.gene038083:intron |
CAGGTGTATGCCATTGACTT+CGG | 0.512497 | 1.2:-52862465 | MS.gene038083:CDS |
AGAATTTGCGCGGTTCCTCT+GGG | 0.513807 | 1.2:+52859789 | None:intergenic |
CTGGCAGGATGGCCACAAGT+GGG | 0.513957 | 1.2:-52859219 | MS.gene038083:CDS |
AGGGATGATCTGGAATCTCT+TGG | 0.515030 | 1.2:-52861907 | MS.gene038083:CDS |
GAAGGTATCAACTCCAATAG+AGG | 0.515426 | 1.2:-52861710 | MS.gene038083:intron |
GTCTTCCCTGGCAAGGACTG+AGG | 0.516641 | 1.2:-52861774 | MS.gene038083:CDS |
AATTGTCTGGCTTTATGTCT+CGG | 0.521040 | 1.2:+52864552 | None:intergenic |
ATCACTTACCGATTCCAAGA+TGG | 0.522339 | 1.2:+52862055 | None:intergenic |
TCCACTATTGCCGTTCGTTG+AGG | 0.522705 | 1.2:-52860418 | MS.gene038083:CDS |
CAGAGTAGTGGCAGCTCTAG+AGG | 0.523385 | 1.2:-52860193 | MS.gene038083:CDS |
TCACTTACCGATTCCAAGAT+GGG | 0.528445 | 1.2:+52862056 | None:intergenic |
AGGCCCATCAGAAAATTGTC+TGG | 0.529417 | 1.2:+52864539 | None:intergenic |
AACTCCAAACCATTTGAGGT+GGG | 0.533255 | 1.2:+52864832 | None:intergenic |
TGGCAGGATGGCCACAAGTG+GGG | 0.534769 | 1.2:-52859218 | MS.gene038083:CDS |
CTCTATGTGCGCCAGATGGA+CGG | 0.535759 | 1.2:+52859194 | None:intergenic |
CTTGATTTGCTTTACGTCCG+AGG | 0.536022 | 1.2:+52864519 | None:intergenic |
TTGTAACGACAGCATGGCAC+TGG | 0.538838 | 1.2:-52860105 | MS.gene038083:intron |
ATCATGGATCATGTGATTGG+TGG | 0.540398 | 1.2:-52865624 | MS.gene038083:CDS |
TATACAAACTGGAGAGGAGG+TGG | 0.543406 | 1.2:-52865432 | MS.gene038083:CDS |
TTGAATAAATCTTCCAGACT+GGG | 0.547330 | 1.2:+52864770 | None:intergenic |
TAATGTATTTCTTAAGAGGA+AGG | 0.552033 | 1.2:-52861876 | MS.gene038083:intron |
TAGTGGCAGCTCTAGAGGAC+GGG | 0.553447 | 1.2:-52860188 | MS.gene038083:intron |
TCTGGCAGGATGGCCACAAG+TGG | 0.554722 | 1.2:-52859220 | MS.gene038083:CDS |
GTAGTGGCAGCTCTAGAGGA+CGG | 0.557752 | 1.2:-52860189 | MS.gene038083:CDS |
GTTGAATACATGCATTCAAG+AGG | 0.558652 | 1.2:-52864584 | MS.gene038083:CDS |
TCATCAAAGCCAAATTCCTC+AGG | 0.559975 | 1.2:-52859250 | MS.gene038083:CDS |
CAACTCCAAACCATTTGAGG+TGG | 0.572196 | 1.2:+52864831 | None:intergenic |
TCCAGGAATCTGTGAAGACC+AGG | 0.574379 | 1.2:-52864916 | MS.gene038083:intron |
CCTCAGGTGACCATTCTGGC+AGG | 0.574601 | 1.2:-52859234 | MS.gene038083:CDS |
AGGTGACCATTCTGGCAGGA+TGG | 0.577708 | 1.2:-52859230 | MS.gene038083:CDS |
TGGTGTGTTCACCGTGATGA+GGG | 0.579905 | 1.2:+52859764 | None:intergenic |
CTCATAGGCACATACCGTAC+AGG | 0.580718 | 1.2:-52862413 | MS.gene038083:intron |
AGACAGACTTACTAATTGAT+CGG | 0.581760 | 1.2:+52864703 | None:intergenic |
CTTGGAAGGAAAATTGGGAG+TGG | 0.582542 | 1.2:-52865591 | MS.gene038083:CDS |
CTTCCAGACTGGGTCCAAGA+AGG | 0.585280 | 1.2:+52864780 | None:intergenic |
GATCACAAAACCAACCTGTA+CGG | 0.586380 | 1.2:+52862399 | None:intergenic |
GAGATTACTTCCTGATAGTG+AGG | 0.590566 | 1.2:+52859080 | None:intergenic |
CCAGCCCTCAGTCCTTGCCA+GGG | 0.593406 | 1.2:+52861769 | None:intergenic |
ACTCCAAACCATTTGAGGTG+GGG | 0.595250 | 1.2:+52864833 | None:intergenic |
TGAACTCTATGTGCGCCAGA+TGG | 0.596034 | 1.2:+52859190 | None:intergenic |
ATTTGGCTTTGATGATACCA+TGG | 0.597247 | 1.2:+52859258 | None:intergenic |
TGGTGGCAGAACAAAGTCGA+AGG | 0.597531 | 1.2:-52861927 | MS.gene038083:intron |
GCTTGTTTCGTATCATACAC+AGG | 0.597643 | 1.2:+52859166 | None:intergenic |
ACGGTGAACACACCAGACAT+AGG | 0.599179 | 1.2:-52859756 | MS.gene038083:CDS |
GCTCGCAATGGGTCTATGAG+AGG | 0.601655 | 1.2:-52859136 | MS.gene038083:CDS |
CCGGAAATTCACTTTGAAGT+CGG | 0.603149 | 1.2:-52864738 | MS.gene038083:CDS |
CTGGTGTGTTCACCGTGATG+AGG | 0.605762 | 1.2:+52859763 | None:intergenic |
AGGAGCTCAAAGCTCCTCAG+AGG | 0.611695 | 1.2:+52859100 | None:intergenic |
ACATAGGACTTATGATGATG+TGG | 0.615199 | 1.2:-52859740 | MS.gene038083:intron |
ACGACAGCATGGCACTGGCA+AGG | 0.615258 | 1.2:-52860100 | MS.gene038083:intron |
TTGAAGTATCCACAGAGTAG+TGG | 0.619683 | 1.2:-52860205 | MS.gene038083:CDS |
TTTGACTCATAGTGAAGCTG+TGG | 0.620621 | 1.2:+52864890 | None:intergenic |
CGATAAAATCAGTGAGACGA+AGG | 0.621170 | 1.2:-52861728 | MS.gene038083:CDS |
TGTCCTCAAACCTCAACGAA+CGG | 0.628598 | 1.2:+52860408 | None:intergenic |
TGAGGGAGAGTACAATGTCA+TGG | 0.631924 | 1.2:-52864810 | MS.gene038083:CDS |
AAATAAGAACCTTACAGGCA+CGG | 0.632067 | 1.2:-52862100 | MS.gene038083:CDS |
GATGAGGGCTAGAATTTGCG+CGG | 0.634849 | 1.2:+52859779 | None:intergenic |
TAATATACAAACTGGAGAGG+AGG | 0.635465 | 1.2:-52865435 | MS.gene038083:CDS |
AAGCAGTTCAAGAAGAGCCA+TGG | 0.646616 | 1.2:-52859275 | MS.gene038083:CDS |
CTAGAGCTGCCACTACTCTG+TGG | 0.650464 | 1.2:+52860196 | None:intergenic |
AAGTATGATACAAACTCAGA+GGG | 0.655305 | 1.2:+52860440 | None:intergenic |
TGTTAATATACAAACTGGAG+AGG | 0.660638 | 1.2:-52865438 | MS.gene038083:CDS |
GAAGTATGATACAAACTCAG+AGG | 0.660966 | 1.2:+52860439 | None:intergenic |
GGTGGCAGAACAAAGTCGAA+GGG | 0.669079 | 1.2:-52861926 | MS.gene038083:intron |
TTGTTGAAGCATTCACCCAG+AGG | 0.669158 | 1.2:-52859804 | MS.gene038083:CDS |
CCTGCCAGAATGGTCACCTG+AGG | 0.679602 | 1.2:+52859234 | None:intergenic |
GCAAATTCTAGCCCTCATCA+CGG | 0.684087 | 1.2:-52859775 | MS.gene038083:CDS |
AGCTCCTCAGAGGATCATCA+CGG | 0.696325 | 1.2:+52859110 | None:intergenic |
GCCACCGTGATGATCCTCTG+AGG | 0.725239 | 1.2:-52859114 | MS.gene038083:CDS |
CTGTATATGATTCTTCAAGG+AGG | 0.728537 | 1.2:-52864866 | MS.gene038083:CDS |
TCCTCAGAGGATCATCACGG+TGG | 0.751052 | 1.2:+52859113 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATGAATTATTACATTATT+AGG | - | chr1.2:52862719-52862738 | MS.gene038083:intron | 10.0% |
!! | ATGAATTAAAAACAAAAAAA+AGG | + | chr1.2:52859181-52859200 | None:intergenic | 10.0% |
!! | ATTAAATATAAGAAAATCTT+GGG | - | chr1.2:52860580-52860599 | MS.gene038083:intron | 10.0% |
!! | CCATAAAATAAAATAAAAAA+TGG | + | chr1.2:52862095-52862114 | None:intergenic | 10.0% |
!! | TAATCATATATAGATAATTT+AGG | + | chr1.2:52860322-52860341 | None:intergenic | 10.0% |
!! | TGAATTAAAAACAAAAAAAA+GGG | + | chr1.2:52859180-52859199 | None:intergenic | 10.0% |
!!! | CCATTTTTTATTTTATTTTA+TGG | - | chr1.2:52862092-52862111 | MS.gene038083:CDS | 10.0% |
!!! | TACTTTTCATTTTTAAATTA+CGG | - | chr1.2:52863273-52863292 | MS.gene038083:intron | 10.0% |
!!! | TGTTTTTAATTCATTTATTT+GGG | - | chr1.2:52859187-52859206 | MS.gene038083:CDS | 10.0% |
!!! | TTGTTTTTAATTCATTTATT+TGG | - | chr1.2:52859186-52859205 | MS.gene038083:CDS | 10.0% |
!!! | TTTATGAAAATAACATTTTA+GGG | + | chr1.2:52864140-52864159 | None:intergenic | 10.0% |
!!! | TTTTAGATTTGTAAATAAAA+CGG | + | chr1.2:52865200-52865219 | None:intergenic | 10.0% |
!!! | TTTTATGAAAATAACATTTT+AGG | + | chr1.2:52864141-52864160 | None:intergenic | 10.0% |
!! | AAAAACATAATAGCTTAAAA+TGG | + | chr1.2:52860407-52860426 | None:intergenic | 15.0% |
!! | AAAACATAATAGCTTAAAAT+GGG | + | chr1.2:52860406-52860425 | None:intergenic | 15.0% |
!! | AAAATGACTAATAAAAACTA+AGG | - | chr1.2:52863685-52863704 | MS.gene038083:intron | 15.0% |
!! | ATCATCATACATTAATTATT+AGG | - | chr1.2:52863794-52863813 | MS.gene038083:intron | 15.0% |
!! | ATTTATTCAATTATTGTAAC+CGG | - | chr1.2:52859948-52859967 | MS.gene038083:intron | 15.0% |
!! | CTAAAATATTATCTACATTT+AGG | + | chr1.2:52862490-52862509 | None:intergenic | 15.0% |
!! | GATTAAATATAAGAAAATCT+TGG | - | chr1.2:52860579-52860598 | MS.gene038083:intron | 15.0% |
!! | GATTATGTAATGTTATATTA+TGG | + | chr1.2:52863777-52863796 | None:intergenic | 15.0% |
!! | TAATATGGTTCTTTATATAA+TGG | - | chr1.2:52860046-52860065 | MS.gene038083:intron | 15.0% |
!! | TATTATATTGATATTGATAG+CGG | - | chr1.2:52861169-52861188 | MS.gene038083:intron | 15.0% |
!!! | ATATTTTTCACTAATCAATT+TGG | + | chr1.2:52863622-52863641 | None:intergenic | 15.0% |
!!! | ATGTTTTAAATGTTAACTTT+TGG | - | chr1.2:52859514-52859533 | MS.gene038083:intron | 15.0% |
!!! | CATAGTAATATTTACTTTTT+GGG | - | chr1.2:52861627-52861646 | MS.gene038083:intron | 15.0% |
!!! | TACTTTTCTTTTTCAAATTA+CGG | + | chr1.2:52864072-52864091 | None:intergenic | 15.0% |
!!! | TCATAGTAATATTTACTTTT+TGG | - | chr1.2:52861626-52861645 | MS.gene038083:intron | 15.0% |
!!! | TTTTATGAATTTCTAGAATT+TGG | - | chr1.2:52859363-52859382 | MS.gene038083:intron | 15.0% |
!!! | TTTTATTTTATGGATGTTAT+AGG | - | chr1.2:52862102-52862121 | MS.gene038083:CDS | 15.0% |
!! | AACTAAAACAATATCAAACT+TGG | - | chr1.2:52862518-52862537 | MS.gene038083:intron | 20.0% |
!! | ACAAAATATATTGAGATCAA+TGG | + | chr1.2:52862556-52862575 | None:intergenic | 20.0% |
!! | AGCAATTATTAAGCAATATA+AGG | + | chr1.2:52862386-52862405 | None:intergenic | 20.0% |
!! | ATATTTACAAATGGTAAACA+AGG | + | chr1.2:52865137-52865156 | None:intergenic | 20.0% |
!! | CAAAATATATTGAGATCAAT+GGG | + | chr1.2:52862555-52862574 | None:intergenic | 20.0% |
!! | CTAGTACAAATATTTACAAA+TGG | + | chr1.2:52865146-52865165 | None:intergenic | 20.0% |
!! | CTCTTTAAATATGAATAATC+TGG | + | chr1.2:52864325-52864344 | None:intergenic | 20.0% |
!! | GATATTATCTGAACTATTTA+GGG | - | chr1.2:52859426-52859445 | MS.gene038083:intron | 20.0% |
!! | TATATTATGGAAAAACTTGA+AGG | + | chr1.2:52863764-52863783 | None:intergenic | 20.0% |
!! | TTATGTGAAAAAACATGAAA+TGG | + | chr1.2:52865090-52865109 | None:intergenic | 20.0% |
!!! | AAGCTATTATGTTTTTTCTT+TGG | - | chr1.2:52860411-52860430 | MS.gene038083:CDS | 20.0% |
!!! | ACAAGATTCTATCATTTTTT+CGG | + | chr1.2:52860998-52861017 | None:intergenic | 20.0% |
!!! | ATATTTTTCTTCTTTGCTTA+GGG | - | chr1.2:52862581-52862600 | MS.gene038083:intron | 20.0% |
!!! | ATCCAAATTATTTAAGATGA+TGG | + | chr1.2:52863432-52863451 | None:intergenic | 20.0% |
!!! | GTTGATTTTTTTTTTCATGT+TGG | - | chr1.2:52859385-52859404 | MS.gene038083:intron | 20.0% |
!!! | GTTTCTTGTTTATTAGAAAT+TGG | - | chr1.2:52863118-52863137 | MS.gene038083:intron | 20.0% |
!!! | TAAAAACTAAGGTTTGTTTT+TGG | - | chr1.2:52863696-52863715 | MS.gene038083:intron | 20.0% |
!!! | TACAAAATGAAGTCTTTTAA+AGG | + | chr1.2:52861973-52861992 | None:intergenic | 20.0% |
!!! | TCTTTATTTATATCAAAGAC+AGG | + | chr1.2:52861393-52861412 | None:intergenic | 20.0% |
!!! | TGAAGGTTTTGAATTAAAAT+GGG | + | chr1.2:52863747-52863766 | None:intergenic | 20.0% |
!!! | TTACGTGCTTTTATAAAAAT+AGG | - | chr1.2:52864225-52864244 | MS.gene038083:intron | 20.0% |
!!! | TTGAAGGTTTTGAATTAAAA+TGG | + | chr1.2:52863748-52863767 | None:intergenic | 20.0% |
!!! | TTGTTGTTTTACATTTTTGT+TGG | - | chr1.2:52864561-52864580 | MS.gene038083:CDS | 20.0% |
!!! | TTTTTTTTGTTATCAGTTAG+TGG | - | chr1.2:52859700-52859719 | MS.gene038083:intron | 20.0% |
! | AAACTGTATATGATTCTTCA+AGG | - | chr1.2:52859836-52859855 | MS.gene038083:CDS | 25.0% |
! | AAGCAACTTTCAAAAATTAG+TGG | - | chr1.2:52863975-52863994 | MS.gene038083:intron | 25.0% |
! | AATAAATTAAGTGTGATCAG+TGG | + | chr1.2:52864027-52864046 | None:intergenic | 25.0% |
! | ACCTAGAAAAGAATTATGAT+AGG | - | chr1.2:52860348-52860367 | MS.gene038083:intron | 25.0% |
! | AGAGTCTAAATAGGAATAAA+TGG | - | chr1.2:52860513-52860532 | MS.gene038083:intron | 25.0% |
! | AGCAACTTTCAAAAATTAGT+GGG | - | chr1.2:52863976-52863995 | MS.gene038083:intron | 25.0% |
! | AGCCATCATCTTAAATAATT+TGG | - | chr1.2:52863427-52863446 | MS.gene038083:intron | 25.0% |
! | AGCTGAATAAGAATGAAATT+CGG | - | chr1.2:52864690-52864709 | MS.gene038083:intron | 25.0% |
! | ATATACTAATTGTGTGATTG+TGG | - | chr1.2:52862758-52862777 | MS.gene038083:intron | 25.0% |
! | ATATCATTTATCGAAGGAAA+TGG | - | chr1.2:52859483-52859502 | MS.gene038083:intron | 25.0% |
! | ATGAAAATAAGCAAAATGAC+TGG | + | chr1.2:52861576-52861595 | None:intergenic | 25.0% |
! | ATGTTATAATTAGCACTGTA+TGG | + | chr1.2:52861877-52861896 | None:intergenic | 25.0% |
! | CCTAGAAAAGAATTATGATA+GGG | - | chr1.2:52860349-52860368 | MS.gene038083:intron | 25.0% |
! | GGATATTATCTGAACTATTT+AGG | - | chr1.2:52859425-52859444 | MS.gene038083:intron | 25.0% |
! | GGTAAACAAGGTAAAAAAAA+GGG | + | chr1.2:52865125-52865144 | None:intergenic | 25.0% |
! | GTGATTTCCAGTAAAAAAAA+TGG | + | chr1.2:52862465-52862484 | None:intergenic | 25.0% |
! | TAATGTATTTCTTAAGAGGA+AGG | - | chr1.2:52862829-52862848 | MS.gene038083:intron | 25.0% |
! | TCAGTTTATTAATTTCATCG+TGG | - | chr1.2:52861843-52861862 | MS.gene038083:intron | 25.0% |
! | TGGTAAACAAGGTAAAAAAA+AGG | + | chr1.2:52865126-52865145 | None:intergenic | 25.0% |
! | TTAAACTTGGAAGGAAAATT+GGG | - | chr1.2:52859109-52859128 | MS.gene038083:CDS | 25.0% |
! | TTAATTCCTTTGTCTATTGT+GGG | - | chr1.2:52860251-52860270 | MS.gene038083:intron | 25.0% |
! | TTAGGTTAAGCTAAACAATT+AGG | - | chr1.2:52862351-52862370 | MS.gene038083:intron | 25.0% |
! | TTCAGTTATTTGTGTTTGAA+AGG | - | chr1.2:52860795-52860814 | MS.gene038083:intron | 25.0% |
! | TTGGCGAAAGTTATTTAATA+TGG | - | chr1.2:52860031-52860050 | MS.gene038083:intron | 25.0% |
! | TTTAAACTTGGAAGGAAAAT+TGG | - | chr1.2:52859108-52859127 | MS.gene038083:CDS | 25.0% |
! | TTTAATTCCTTTGTCTATTG+TGG | - | chr1.2:52860250-52860269 | MS.gene038083:intron | 25.0% |
!! | AAAAAACAAACAAAAGTGTG+AGG | + | chr1.2:52860089-52860108 | None:intergenic | 25.0% |
!! | AAAGCAATTGGTTTCTTTAA+GGG | - | chr1.2:52862008-52862027 | MS.gene038083:intron | 25.0% |
!! | AATGTTAACTTTTGGTCAAT+AGG | - | chr1.2:52859522-52859541 | MS.gene038083:intron | 25.0% |
!! | AGTATATTTTGCTGGAAATT+CGG | - | chr1.2:52864408-52864427 | MS.gene038083:intron | 25.0% |
!! | ATGCATTTTCCACATTATTT+TGG | + | chr1.2:52864386-52864405 | None:intergenic | 25.0% |
!! | GATATTTTTCTTCTTTGCTT+AGG | - | chr1.2:52862580-52862599 | MS.gene038083:intron | 25.0% |
!! | TATTTTCATATCACGTCTAT+TGG | - | chr1.2:52861587-52861606 | MS.gene038083:intron | 25.0% |
!! | TGCATTTTCCACATTATTTT+GGG | + | chr1.2:52864385-52864404 | None:intergenic | 25.0% |
!! | TGTCATATATTTTCTTGTGT+GGG | - | chr1.2:52860472-52860491 | MS.gene038083:intron | 25.0% |
!! | TTTGTGATCATAATTTTAGG+AGG | - | chr1.2:52862320-52862339 | MS.gene038083:intron | 25.0% |
!!! | AACATCAACTTTTTTTACCA+GGG | + | chr1.2:52861047-52861066 | None:intergenic | 25.0% |
!!! | AACTTAGGATTTTAAAGGAA+AGG | + | chr1.2:52861551-52861570 | None:intergenic | 25.0% |
!!! | AATTTGACTATGTTTTTGAC+TGG | - | chr1.2:52864471-52864490 | MS.gene038083:intron | 25.0% |
!!! | AGTAATATTTACTTTTTGGG+AGG | - | chr1.2:52861630-52861649 | MS.gene038083:intron | 25.0% |
!!! | AGTCTTTTAAAGGATACAAA+CGG | + | chr1.2:52861963-52861982 | None:intergenic | 25.0% |
!!! | CAGTCGATTATATTTAGTTT+TGG | + | chr1.2:52862195-52862214 | None:intergenic | 25.0% |
!!! | CATTTTGGTCTCTAAATATA+TGG | - | chr1.2:52863515-52863534 | MS.gene038083:intron | 25.0% |
!!! | GGTTTTGTGATCATAATTTT+AGG | - | chr1.2:52862317-52862336 | MS.gene038083:intron | 25.0% |
!!! | GTAATATTTACTTTTTGGGA+GGG | - | chr1.2:52861631-52861650 | MS.gene038083:intron | 25.0% |
!!! | TAACATCAACTTTTTTTACC+AGG | + | chr1.2:52861048-52861067 | None:intergenic | 25.0% |
!!! | TGTTATGCCATTTTTTTTAC+TGG | - | chr1.2:52862455-52862474 | MS.gene038083:CDS | 25.0% |
!!! | TTGGTTCTAGATGTATTATT+AGG | - | chr1.2:52859404-52859423 | MS.gene038083:intron | 25.0% |
!!! | TTGTGATCATAATTTTAGGA+GGG | - | chr1.2:52862321-52862340 | MS.gene038083:intron | 25.0% |
AAAAAAAAACTGACAGATGC+AGG | + | chr1.2:52863038-52863057 | None:intergenic | 30.0% | |
AAAAGTTTGATAGAGGAGTA+TGG | - | chr1.2:52860290-52860309 | MS.gene038083:intron | 30.0% | |
AAGCATTCCTAAAGATGTTA+TGG | + | chr1.2:52863883-52863902 | None:intergenic | 30.0% | |
AAGTATGATACAAACTCAGA+GGG | + | chr1.2:52864268-52864287 | None:intergenic | 30.0% | |
AATATTTCAATCACACTCAG+TGG | - | chr1.2:52863353-52863372 | MS.gene038083:intron | 30.0% | |
ACATACCTTCTCGAATAAAA+AGG | + | chr1.2:52864360-52864379 | None:intergenic | 30.0% | |
AGACAGACTTACTAATTGAT+CGG | + | chr1.2:52860005-52860024 | None:intergenic | 30.0% | |
ATATTCCCCTCTTAATATTC+AGG | + | chr1.2:52860643-52860662 | None:intergenic | 30.0% | |
ATGACATCAAAATACAAGCT+TGG | - | chr1.2:52861444-52861463 | MS.gene038083:intron | 30.0% | |
ATTGAATAAATCTTCCAGAC+TGG | + | chr1.2:52859939-52859958 | None:intergenic | 30.0% | |
ATTGGTGGAAAGTTTAAACT+TGG | - | chr1.2:52859096-52859115 | MS.gene038083:CDS | 30.0% | |
CAACTCAACATTATACTCAA+GGG | + | chr1.2:52861753-52861772 | None:intergenic | 30.0% | |
CAAGTCATAATTACCTCTAT+TGG | + | chr1.2:52863011-52863030 | None:intergenic | 30.0% | |
CATAGTTGAAGAGTCTAAAT+AGG | - | chr1.2:52860504-52860523 | MS.gene038083:intron | 30.0% | |
CCAAAATGACAACTCTAAAT+TGG | + | chr1.2:52863503-52863522 | None:intergenic | 30.0% | |
CTATAGACAAGTATAACACA+TGG | - | chr1.2:52860375-52860394 | MS.gene038083:CDS | 30.0% | |
GAAAAGATATGATTGTGCAA+TGG | - | chr1.2:52860911-52860930 | MS.gene038083:intron | 30.0% | |
GAATATTAAGAGGGGAATAT+TGG | - | chr1.2:52860643-52860662 | MS.gene038083:intron | 30.0% | |
GATGTACAATACTAACTTAG+AGG | - | chr1.2:52863471-52863490 | MS.gene038083:intron | 30.0% | |
GCAACTTTCAAAAATTAGTG+GGG | - | chr1.2:52863977-52863996 | MS.gene038083:intron | 30.0% | |
GTATGACCTGAATATTAAGA+GGG | - | chr1.2:52860634-52860653 | MS.gene038083:intron | 30.0% | |
GTATGTTACCCAAAATAATG+TGG | - | chr1.2:52864374-52864393 | MS.gene038083:intron | 30.0% | |
GTGCTAATGTATTTCTTAAG+AGG | - | chr1.2:52862825-52862844 | MS.gene038083:intron | 30.0% | |
TACCCATTATAATGAGTCTT+CGG | - | chr1.2:52861415-52861434 | MS.gene038083:intron | 30.0% | |
TATAATTAGCACTGTATGGT+TGG | + | chr1.2:52861873-52861892 | None:intergenic | 30.0% | |
TATGACCTGAATATTAAGAG+GGG | - | chr1.2:52860635-52860654 | MS.gene038083:intron | 30.0% | |
TCAGCTGTTAATATACAAAC+TGG | - | chr1.2:52859262-52859281 | MS.gene038083:CDS | 30.0% | |
TCTTGAAATGAGATGTGAAA+TGG | - | chr1.2:52859557-52859576 | MS.gene038083:intron | 30.0% | |
TGGAGAAAGATATAAATCGT+AGG | - | chr1.2:52860740-52860759 | MS.gene038083:intron | 30.0% | |
TGGTTGAGTAACATTTGAAT+TGG | - | chr1.2:52861464-52861483 | MS.gene038083:intron | 30.0% | |
TGTTAATATACAAACTGGAG+AGG | - | chr1.2:52859267-52859286 | MS.gene038083:CDS | 30.0% | |
TTGAATAAATCTTCCAGACT+GGG | + | chr1.2:52859938-52859957 | None:intergenic | 30.0% | |
! | AAAGTTTGATAGAGGAGTAT+GGG | - | chr1.2:52860291-52860310 | MS.gene038083:intron | 30.0% |
! | AAGATTTTACATGAGACAGA+AGG | + | chr1.2:52864180-52864199 | None:intergenic | 30.0% |
! | AGATTTTACATGAGACAGAA+GGG | + | chr1.2:52864179-52864198 | None:intergenic | 30.0% |
! | ATAACATCTTTAGGAATGCT+TGG | - | chr1.2:52863882-52863901 | MS.gene038083:intron | 30.0% |
! | ATCTTTTGTGCTTTATGTAC+TGG | + | chr1.2:52864651-52864670 | None:intergenic | 30.0% |
! | ATGCATTCAGTATATTTTGC+TGG | - | chr1.2:52864400-52864419 | MS.gene038083:intron | 30.0% |
! | ATTTCCTTCAAACTTTTGAG+AGG | + | chr1.2:52860823-52860842 | None:intergenic | 30.0% |
! | CAAAGCAATTGGTTTCTTTA+AGG | - | chr1.2:52862007-52862026 | MS.gene038083:intron | 30.0% |
! | CCCTATCATAATTCTTTTCT+AGG | + | chr1.2:52860352-52860371 | None:intergenic | 30.0% |
! | CCTCTATCAAACTTTTCAAA+AGG | + | chr1.2:52860286-52860305 | None:intergenic | 30.0% |
! | CTGTCATATATTTTCTTGTG+TGG | - | chr1.2:52860471-52860490 | MS.gene038083:intron | 30.0% |
! | TAGTTTTTGACAGAATGCAA+CGG | - | chr1.2:52861308-52861327 | MS.gene038083:intron | 30.0% |
! | TCATGCTATTTGTTTCAGTT+GGG | - | chr1.2:52864847-52864866 | MS.gene038083:CDS | 30.0% |
! | TGGTGAACTTAGGATTTTAA+AGG | + | chr1.2:52861556-52861575 | None:intergenic | 30.0% |
! | TTAGAGATGAGAATTTTGCA+GGG | - | chr1.2:52860871-52860890 | MS.gene038083:intron | 30.0% |
! | TTCATGCTATTTGTTTCAGT+TGG | - | chr1.2:52864846-52864865 | MS.gene038083:CDS | 30.0% |
! | TTGTGTAGTTTGGATGATTT+TGG | - | chr1.2:52861357-52861376 | MS.gene038083:intron | 30.0% |
! | TTTAGAGATGAGAATTTTGC+AGG | - | chr1.2:52860870-52860889 | MS.gene038083:intron | 30.0% |
!! | ATATCGAGTTGAATTGTGTT+GGG | + | chr1.2:52865408-52865427 | None:intergenic | 30.0% |
!! | CCAATTTAGAGTTGTCATTT+TGG | - | chr1.2:52863500-52863519 | MS.gene038083:intron | 30.0% |
!! | CCTTTTGAAAAGTTTGATAG+AGG | - | chr1.2:52860283-52860302 | MS.gene038083:intron | 30.0% |
!! | GTTTTAATGGTTGTGTAGTT+TGG | - | chr1.2:52861347-52861366 | MS.gene038083:intron | 30.0% |
!! | TTTTTGTTATCAGTTAGTGG+TGG | - | chr1.2:52859703-52859722 | MS.gene038083:intron | 30.0% |
!!! | ATAACATTTTAGGGTGTGTT+TGG | + | chr1.2:52864131-52864150 | None:intergenic | 30.0% |
!!! | CATTTGATTCGTGGTTTTAA+TGG | - | chr1.2:52861334-52861353 | MS.gene038083:intron | 30.0% |
AAACACTTGACTTCTCTTGT+TGG | + | chr1.2:52860852-52860871 | None:intergenic | 35.0% | |
AAAGGCTCCATAACATCTTT+AGG | - | chr1.2:52863873-52863892 | MS.gene038083:intron | 35.0% | |
AAATAAGAACCTTACAGGCA+CGG | - | chr1.2:52862605-52862624 | MS.gene038083:intron | 35.0% | |
AAATTAAGTGTGATCAGTGG+CGG | + | chr1.2:52864024-52864043 | None:intergenic | 35.0% | |
AGAATCTTGTCTAACATGTG+AGG | - | chr1.2:52861008-52861027 | MS.gene038083:intron | 35.0% | |
AGACAAGTATAACACATGGT+AGG | - | chr1.2:52860379-52860398 | MS.gene038083:CDS | 35.0% | |
AGCCTTTAAACAAAAACGCT+TGG | + | chr1.2:52863860-52863879 | None:intergenic | 35.0% | |
AGCGTAAGTCATTGAACTAA+AGG | + | chr1.2:52861666-52861685 | None:intergenic | 35.0% | |
AGGGAAAATAAGAACCTTAC+AGG | - | chr1.2:52862600-52862619 | MS.gene038083:intron | 35.0% | |
ATCATCATAAGTCCTATGTC+TGG | + | chr1.2:52864964-52864983 | None:intergenic | 35.0% | |
ATGCAATAGTGCTCAATAAC+TGG | + | chr1.2:52863098-52863117 | None:intergenic | 35.0% | |
ATGCCGAAGACTCATTATAA+TGG | + | chr1.2:52861421-52861440 | None:intergenic | 35.0% | |
ATGTTCTTACTAGCATATCC+AGG | - | chr1.2:52860440-52860459 | MS.gene038083:CDS | 35.0% | |
ATTGAACCCACAATAGACAA+AGG | + | chr1.2:52860260-52860279 | None:intergenic | 35.0% | |
ATTTCCTAAATTTGTCGTGC+AGG | + | chr1.2:52861720-52861739 | None:intergenic | 35.0% | |
CAACACAATTCAACTCGATA+TGG | - | chr1.2:52865407-52865426 | MS.gene038083:intron | 35.0% | |
CAGTTGAATGCAGGAAATAT+AGG | + | chr1.2:52863191-52863210 | None:intergenic | 35.0% | |
CATAAAGCACAAAAGATTCC+AGG | - | chr1.2:52864654-52864673 | MS.gene038083:intron | 35.0% | |
CATATTAATGCCACAACACA+AGG | - | chr1.2:52860670-52860689 | MS.gene038083:intron | 35.0% | |
CATTCAACTGTTAGCACTTA+GGG | - | chr1.2:52863201-52863220 | MS.gene038083:intron | 35.0% | |
CCAACTCAACATTATACTCA+AGG | + | chr1.2:52861754-52861773 | None:intergenic | 35.0% | |
CCTTGAGTATAATGTTGAGT+TGG | - | chr1.2:52861751-52861770 | MS.gene038083:CDS | 35.0% | |
CTGTATATGATTCTTCAAGG+AGG | - | chr1.2:52859839-52859858 | MS.gene038083:CDS | 35.0% | |
CTTCTCGAATAAAAAGGTCT+CGG | + | chr1.2:52864354-52864373 | None:intergenic | 35.0% | |
CTTGCGATATCATTTATCGA+AGG | - | chr1.2:52859477-52859496 | MS.gene038083:intron | 35.0% | |
CTTGGTATGATAGATTCAAG+GGG | + | chr1.2:52860709-52860728 | None:intergenic | 35.0% | |
GAAAAACTCAAGGACAAACA+TGG | + | chr1.2:52861503-52861522 | None:intergenic | 35.0% | |
GAAGTATGATACAAACTCAG+AGG | + | chr1.2:52864269-52864288 | None:intergenic | 35.0% | |
GACAAGTATAACACATGGTA+GGG | - | chr1.2:52860380-52860399 | MS.gene038083:CDS | 35.0% | |
GAGTACTCTTGAAAAACTCA+AGG | + | chr1.2:52861513-52861532 | None:intergenic | 35.0% | |
GCTTGGTATGATAGATTCAA+GGG | + | chr1.2:52860710-52860729 | None:intergenic | 35.0% | |
GGATACAAACGGTTAAGTTT+AGG | + | chr1.2:52861952-52861971 | None:intergenic | 35.0% | |
GGTATGACCTGAATATTAAG+AGG | - | chr1.2:52860633-52860652 | MS.gene038083:intron | 35.0% | |
GGTTCTGTCAAAAATATTCC+AGG | - | chr1.2:52859772-52859791 | MS.gene038083:CDS | 35.0% | |
GTGGAAAGTTTAAACTTGGA+AGG | - | chr1.2:52859100-52859119 | MS.gene038083:CDS | 35.0% | |
GTTGAATACATGCATTCAAG+AGG | - | chr1.2:52860121-52860140 | MS.gene038083:intron | 35.0% | |
TAATATACAAACTGGAGAGG+AGG | - | chr1.2:52859270-52859289 | MS.gene038083:CDS | 35.0% | |
TACTAATTGTGTGATTGTGG+TGG | - | chr1.2:52862761-52862780 | MS.gene038083:intron | 35.0% | |
TATTAAGAGGGGAATATTGG+AGG | - | chr1.2:52860646-52860665 | MS.gene038083:intron | 35.0% | |
TCCAATTTCCAATTGTCTCA+CGG | - | chr1.2:52859751-52859770 | MS.gene038083:CDS | 35.0% | |
TGAGATCAATGGGAATTTGT+GGG | + | chr1.2:52862545-52862564 | None:intergenic | 35.0% | |
TGCCGAAGACTCATTATAAT+GGG | + | chr1.2:52861420-52861439 | None:intergenic | 35.0% | |
TGCTTGATTGCACTATGTAA+CGG | + | chr1.2:52861229-52861248 | None:intergenic | 35.0% | |
TTGAGATCAATGGGAATTTG+TGG | + | chr1.2:52862546-52862565 | None:intergenic | 35.0% | |
TTTCCTAAATTTGTCGTGCA+GGG | + | chr1.2:52861719-52861738 | None:intergenic | 35.0% | |
! | AAAATTGGGAGTGGTTCTTT+TGG | - | chr1.2:52859123-52859142 | MS.gene038083:CDS | 35.0% |
! | AAAGCCAGACAATTTTCTGA+TGG | - | chr1.2:52860162-52860181 | MS.gene038083:intron | 35.0% |
! | AAGCCAGACAATTTTCTGAT+GGG | - | chr1.2:52860163-52860182 | MS.gene038083:intron | 35.0% |
! | ACATAGGACTTATGATGATG+TGG | - | chr1.2:52864965-52864984 | MS.gene038083:intron | 35.0% |
! | ATATTTTGCTGGAAATTCGG+TGG | - | chr1.2:52864411-52864430 | MS.gene038083:intron | 35.0% |
! | CAATTGGTTTCTTTAAGGGT+GGG | - | chr1.2:52862012-52862031 | MS.gene038083:intron | 35.0% |
! | CATTTTATCGTGTTAACGCT+AGG | + | chr1.2:52861926-52861945 | None:intergenic | 35.0% |
! | CGGTAAGTGATATTTTATGC+TGG | - | chr1.2:52862662-52862681 | MS.gene038083:intron | 35.0% |
! | GTTAACTTTTGGTCAATAGG+TGG | - | chr1.2:52859525-52859544 | MS.gene038083:intron | 35.0% |
! | TAGAGATGAGAATTTTGCAG+GGG | - | chr1.2:52860872-52860891 | MS.gene038083:intron | 35.0% |
! | TCATTTTGTAGTCTCCTTGT+TGG | - | chr1.2:52861983-52862002 | MS.gene038083:intron | 35.0% |
! | TGTAAATTCGTAGTCTTGAC+AGG | + | chr1.2:52860944-52860963 | None:intergenic | 35.0% |
! | TGTTTTTCCTACTCTCTCTT+GGG | + | chr1.2:52860968-52860987 | None:intergenic | 35.0% |
! | TTCAAGTGAGTTGGATGAAA+TGG | - | chr1.2:52860764-52860783 | MS.gene038083:intron | 35.0% |
! | TTTGACATGTGCACACATTT+TGG | - | chr1.2:52861796-52861815 | MS.gene038083:intron | 35.0% |
!! | AATTGTCTGGCTTTATGTCT+CGG | + | chr1.2:52860156-52860175 | None:intergenic | 35.0% |
!! | AGCCAAGCGTTTTTGTTTAA+AGG | - | chr1.2:52863855-52863874 | MS.gene038083:intron | 35.0% |
!! | ATGCTGGTTTGTTACTTTCT+CGG | - | chr1.2:52862678-52862697 | MS.gene038083:intron | 35.0% |
!! | ATTTGGCTTTGATGATACCA+TGG | + | chr1.2:52865450-52865469 | None:intergenic | 35.0% |
!! | ATTTTCTTGTGTGGGTTGTA+TGG | - | chr1.2:52860480-52860499 | MS.gene038083:intron | 35.0% |
!! | CATATCGAGTTGAATTGTGT+TGG | + | chr1.2:52865409-52865428 | None:intergenic | 35.0% |
!! | TCTTTTGGAGAGCTCTATTT+AGG | - | chr1.2:52859138-52859157 | MS.gene038083:CDS | 35.0% |
!! | TGAGAATGTTGTTTCCTGTT+TGG | - | chr1.2:52865042-52865061 | MS.gene038083:intron | 35.0% |
!! | TTTTAGGAGGGAGCAATATT+AGG | - | chr1.2:52862333-52862352 | MS.gene038083:intron | 35.0% |
!!! | GATCCCTATATTTTTTCGCA+AGG | + | chr1.2:52862266-52862285 | None:intergenic | 35.0% |
AACGTCTTGTCAAACCAAAC+AGG | + | chr1.2:52865059-52865078 | None:intergenic | 40.0% | |
AAGTGCTAACAGTTGAATGC+AGG | + | chr1.2:52863200-52863219 | None:intergenic | 40.0% | |
ACCAATTGCTTTGACCAACA+AGG | + | chr1.2:52862000-52862019 | None:intergenic | 40.0% | |
ACCGTGAGACAATTGGAAAT+TGG | + | chr1.2:52859755-52859774 | None:intergenic | 40.0% | |
AGCTGCAAAACAGAATTGTG+AGG | + | chr1.2:52859597-52859616 | None:intergenic | 40.0% | |
AGGTCATACCATATCCAATG+TGG | + | chr1.2:52860623-52860642 | None:intergenic | 40.0% | |
AGTAAGTCTGTCTGTCAAGT+TGG | - | chr1.2:52860012-52860031 | MS.gene038083:intron | 40.0% | |
ATAGGGATCTTCAGACTCAT+AGG | - | chr1.2:52862277-52862296 | MS.gene038083:intron | 40.0% | |
ATCGTAGGATTCAAGTGAGT+TGG | - | chr1.2:52860755-52860774 | MS.gene038083:intron | 40.0% | |
ATGATTCTTCAAGGAGGAAC+TGG | - | chr1.2:52859845-52859864 | MS.gene038083:intron | 40.0% | |
ATGGCATAACAGCCTGTTAA+AGG | + | chr1.2:52862446-52862465 | None:intergenic | 40.0% | |
CACACTCTGTATCTCATTTC+AGG | - | chr1.2:52862221-52862240 | MS.gene038083:intron | 40.0% | |
CCGACTTCAAAGTGAATTTC+CGG | + | chr1.2:52859970-52859989 | None:intergenic | 40.0% | |
CGATAAAATCAGTGAGACGA+AGG | - | chr1.2:52862977-52862996 | MS.gene038083:intron | 40.0% | |
CGCTTGGTATGATAGATTCA+AGG | + | chr1.2:52860711-52860730 | None:intergenic | 40.0% | |
CGGCCTTGCGAAAAAATATA+GGG | - | chr1.2:52862260-52862279 | MS.gene038083:intron | 40.0% | |
CTCAACACTTTCTGTTGTGT+TGG | + | chr1.2:52863829-52863848 | None:intergenic | 40.0% | |
GAGATTCGGGAGAAATTATC+TGG | - | chr1.2:52864873-52864892 | MS.gene038083:CDS | 40.0% | |
GATCACAAAACCAACCTGTA+CGG | + | chr1.2:52862309-52862328 | None:intergenic | 40.0% | |
GCAAAATGACTGGTGAACTT+AGG | + | chr1.2:52861566-52861585 | None:intergenic | 40.0% | |
GCATGCAAGTGACTTTATGT+TGG | - | chr1.2:52861818-52861837 | MS.gene038083:intron | 40.0% | |
GCATTCAACTGTTAGCACTT+AGG | - | chr1.2:52863200-52863219 | MS.gene038083:intron | 40.0% | |
GCTTGTTTCGTATCATACAC+AGG | + | chr1.2:52865542-52865561 | None:intergenic | 40.0% | |
GGTACCTCTCAAAAGTTTGA+AGG | - | chr1.2:52860816-52860835 | MS.gene038083:intron | 40.0% | |
GGTCATACCATATCCAATGT+GGG | + | chr1.2:52860622-52860641 | None:intergenic | 40.0% | |
GGTGGGAATTTCTTAATCGT+TGG | - | chr1.2:52862029-52862048 | MS.gene038083:intron | 40.0% | |
TCAAGGACAAACATGGAAAC+AGG | + | chr1.2:52861496-52861515 | None:intergenic | 40.0% | |
TCATCAAAGCCAAATTCCTC+AGG | - | chr1.2:52865455-52865474 | MS.gene038083:intron | 40.0% | |
TCCTTGTTGGTCAAAGCAAT+TGG | - | chr1.2:52861996-52862015 | MS.gene038083:intron | 40.0% | |
TCGGCCTTGCGAAAAAATAT+AGG | - | chr1.2:52862259-52862278 | MS.gene038083:intron | 40.0% | |
TGGCATAACAGCCTGTTAAA+GGG | + | chr1.2:52862445-52862464 | None:intergenic | 40.0% | |
TGTGTTTGGATTGAGGGTTT+AGG | + | chr1.2:52864117-52864136 | None:intergenic | 40.0% | |
TTAGGGTGTGTTTGGATTGA+GGG | + | chr1.2:52864123-52864142 | None:intergenic | 40.0% | |
TTCTTACTAGCATATCCAGG+AGG | - | chr1.2:52860443-52860462 | MS.gene038083:CDS | 40.0% | |
TTGGTCAATAGGTGGATGAT+TGG | - | chr1.2:52859533-52859552 | MS.gene038083:intron | 40.0% | |
TTTACAACCCAAGAGAGAGT+AGG | - | chr1.2:52860958-52860977 | MS.gene038083:intron | 40.0% | |
TTTCAGTTGGGAGAGAGATT+CGG | - | chr1.2:52864859-52864878 | MS.gene038083:CDS | 40.0% | |
TTTGACTCATAGTGAAGCTG+TGG | + | chr1.2:52859818-52859837 | None:intergenic | 40.0% | |
TTTGGATTGAGGGTTTAGGA+GGG | + | chr1.2:52864113-52864132 | None:intergenic | 40.0% | |
! | AACTCCAAACCATTTGAGGT+GGG | + | chr1.2:52859876-52859895 | None:intergenic | 40.0% |
! | AAGCAACTTTTGCTCGCAAT+GGG | - | chr1.2:52865558-52865577 | MS.gene038083:intron | 40.0% |
! | ACATTTGTTGAGTCCCACAT+TGG | - | chr1.2:52860606-52860625 | MS.gene038083:intron | 40.0% |
! | CGAGACCTTTTTATTCGAGA+AGG | - | chr1.2:52864352-52864371 | MS.gene038083:intron | 40.0% |
! | CTCAAATGGTTTGGAGTTGA+GGG | - | chr1.2:52859878-52859897 | MS.gene038083:intron | 40.0% |
! | CTGTTGCTCAGTTCTTTTCA+AGG | + | chr1.2:52861075-52861094 | None:intergenic | 40.0% |
! | GCAATTGGTTTCTTTAAGGG+TGG | - | chr1.2:52862011-52862030 | MS.gene038083:intron | 40.0% |
! | GTGTTTTTCCTACTCTCTCT+TGG | + | chr1.2:52860969-52860988 | None:intergenic | 40.0% |
! | TGTGTTTGGATGGAGTGTTT+AGG | - | chr1.2:52863224-52863243 | MS.gene038083:intron | 40.0% |
! | TTGAAGTATCCACAGAGTAG+TGG | - | chr1.2:52864500-52864519 | MS.gene038083:intron | 40.0% |
! | TTTAGGGTGTGTTTGGATTG+AGG | + | chr1.2:52864124-52864143 | None:intergenic | 40.0% |
! | TTTGGATGGAGTGTTTAGGA+GGG | - | chr1.2:52863228-52863247 | MS.gene038083:intron | 40.0% |
! | TTTTTGTTGGTCGCTTACTG+TGG | - | chr1.2:52864574-52864593 | MS.gene038083:CDS | 40.0% |
!! | ATCACTTACCGATTCCAAGA+TGG | + | chr1.2:52862653-52862672 | None:intergenic | 40.0% |
!! | CCGGAAATTCACTTTGAAGT+CGG | - | chr1.2:52859967-52859986 | MS.gene038083:intron | 40.0% |
!! | GAAGGTATCAACTCCAATAG+AGG | - | chr1.2:52862995-52863014 | MS.gene038083:intron | 40.0% |
!! | GGATTTTAAAGGAAAGGTCC+AGG | + | chr1.2:52861545-52861564 | None:intergenic | 40.0% |
!! | GGTTTGTTACTTTCTCGGTT+AGG | - | chr1.2:52862683-52862702 | MS.gene038083:intron | 40.0% |
!! | TCACTTACCGATTCCAAGAT+GGG | + | chr1.2:52862652-52862671 | None:intergenic | 40.0% |
!!! | TTTCCTTTTTCAGTCTTCCC+TGG | - | chr1.2:52862919-52862938 | MS.gene038083:intron | 40.0% |
AAACTGTGCACCTTGTGTTG+TGG | + | chr1.2:52860683-52860702 | None:intergenic | 45.0% | |
AAGCAGTTCAAGAAGAGCCA+TGG | - | chr1.2:52865430-52865449 | MS.gene038083:CDS | 45.0% | |
AATTCCTCAGGTGACCATTC+TGG | - | chr1.2:52865467-52865486 | MS.gene038083:intron | 45.0% | |
ACAAAGTCGAAGGGATGATC+TGG | - | chr1.2:52862788-52862807 | MS.gene038083:intron | 45.0% | |
AGGCCCATCAGAAAATTGTC+TGG | + | chr1.2:52860169-52860188 | None:intergenic | 45.0% | |
CAACACAAGGTGCACAGTTT+CGG | - | chr1.2:52860683-52860702 | MS.gene038083:intron | 45.0% | |
CAACTCCAAACCATTTGAGG+TGG | + | chr1.2:52859877-52859896 | None:intergenic | 45.0% | |
CATACCAAGCGACGAAGAAA+TGG | - | chr1.2:52860720-52860739 | MS.gene038083:intron | 45.0% | |
CCTCAACTCCAAACCATTTG+AGG | + | chr1.2:52859880-52859899 | None:intergenic | 45.0% | |
CGCAAGCATGCTCAATTTCA+TGG | + | chr1.2:52859463-52859482 | None:intergenic | 45.0% | |
CGCATTTGCATCCCTTTAAC+AGG | - | chr1.2:52862431-52862450 | MS.gene038083:CDS | 45.0% | |
CTGTCACAGCACATATTAGC+AGG | + | chr1.2:52864719-52864738 | None:intergenic | 45.0% | |
CTTGGAAGGAAAATTGGGAG+TGG | - | chr1.2:52859114-52859133 | MS.gene038083:CDS | 45.0% | |
GAATGGTCACCTGAGGAATT+TGG | + | chr1.2:52865467-52865486 | None:intergenic | 45.0% | |
GAGACAGAAGGGAAATGAAG+AGG | + | chr1.2:52864168-52864187 | None:intergenic | 45.0% | |
GAGGAGTCTAATAGAAACCC+TGG | - | chr1.2:52861027-52861046 | MS.gene038083:intron | 45.0% | |
GATCCCTGCACGACAAATTT+AGG | - | chr1.2:52861713-52861732 | MS.gene038083:CDS | 45.0% | |
GCAAATTCTAGCCCTCATCA+CGG | - | chr1.2:52864930-52864949 | MS.gene038083:intron | 45.0% | |
GCAGGGATCTATGCTATGAA+CGG | + | chr1.2:52861702-52861721 | None:intergenic | 45.0% | |
GTCAACACCCATCTTGGAAT+CGG | - | chr1.2:52862642-52862661 | MS.gene038083:intron | 45.0% | |
GTTAGCACTTAGGGTGTGTT+TGG | - | chr1.2:52863210-52863229 | MS.gene038083:intron | 45.0% | |
GTTGAGTCCCACATTGGATA+TGG | - | chr1.2:52860612-52860631 | MS.gene038083:intron | 45.0% | |
GTTTGGATTGAGGGTTTAGG+AGG | + | chr1.2:52864114-52864133 | None:intergenic | 45.0% | |
TATACAAACTGGAGAGGAGG+TGG | - | chr1.2:52859273-52859292 | MS.gene038083:CDS | 45.0% | |
TATATGACAGCGTTACCTCC+TGG | + | chr1.2:52860461-52860480 | None:intergenic | 45.0% | |
TGACAGAACCGTGAGACAAT+TGG | + | chr1.2:52859762-52859781 | None:intergenic | 45.0% | |
TGGTTGTTGTAACGACAGCA+TGG | - | chr1.2:52864594-52864613 | MS.gene038083:CDS | 45.0% | |
TGTCCTCAAACCTCAACGAA+CGG | + | chr1.2:52864300-52864319 | None:intergenic | 45.0% | |
TTCAGTTGGGAGAGAGATTC+GGG | - | chr1.2:52864860-52864879 | MS.gene038083:CDS | 45.0% | |
TTCTCCATTTCTTCGTCGCT+TGG | + | chr1.2:52860727-52860746 | None:intergenic | 45.0% | |
TTGCCAGGGAAGACTGAAAA+AGG | + | chr1.2:52862925-52862944 | None:intergenic | 45.0% | |
TTGGATTGAGGGTTTAGGAG+GGG | + | chr1.2:52864112-52864131 | None:intergenic | 45.0% | |
! | ACTCCAAACCATTTGAGGTG+GGG | + | chr1.2:52859875-52859894 | None:intergenic | 45.0% |
! | AGAATTTTGCAGGGGATGAG+TGG | - | chr1.2:52860880-52860899 | MS.gene038083:intron | 45.0% |
! | AGGGATGATCTGGAATCTCT+TGG | - | chr1.2:52862798-52862817 | MS.gene038083:intron | 45.0% |
! | CAAGCAACTTTTGCTCGCAA+TGG | - | chr1.2:52865557-52865576 | MS.gene038083:intron | 45.0% |
! | CCTCAAATGGTTTGGAGTTG+AGG | - | chr1.2:52859877-52859896 | MS.gene038083:intron | 45.0% |
! | GTTTGGATGGAGTGTTTAGG+AGG | - | chr1.2:52863227-52863246 | MS.gene038083:intron | 45.0% |
! | TGAGGGAGAGTACAATGTCA+TGG | - | chr1.2:52859895-52859914 | MS.gene038083:intron | 45.0% |
! | TTGGATGGAGTGTTTAGGAG+GGG | - | chr1.2:52863229-52863248 | MS.gene038083:intron | 45.0% |
! | TTGTTGAAGCATTCACCCAG+AGG | - | chr1.2:52864901-52864920 | MS.gene038083:CDS | 45.0% |
!! | CAGGTGTATGCCATTGACTT+CGG | - | chr1.2:52862240-52862259 | MS.gene038083:intron | 45.0% |
!! | CTTGATTTGCTTTACGTCCG+AGG | + | chr1.2:52860189-52860208 | None:intergenic | 45.0% |
!! | GACAATTTTCTGATGGGCCT+CGG | - | chr1.2:52860169-52860188 | MS.gene038083:intron | 45.0% |
!! | TTTTTCAGTCTTCCCTGGCA+AGG | - | chr1.2:52862924-52862943 | MS.gene038083:intron | 45.0% |
ACCTCAACGAACGGCAATAG+TGG | + | chr1.2:52864291-52864310 | None:intergenic | 50.0% | |
ACGGTGAACACACCAGACAT+AGG | - | chr1.2:52864949-52864968 | MS.gene038083:intron | 50.0% | |
AGAATTTGCGCGGTTCCTCT+GGG | + | chr1.2:52864919-52864938 | None:intergenic | 50.0% | |
AGCTCCTCAGAGGATCATCA+CGG | + | chr1.2:52865598-52865617 | None:intergenic | 50.0% | |
ATAGTGAAGCTGTGGATGCC+TGG | + | chr1.2:52859810-52859829 | None:intergenic | 50.0% | |
ATCCCCCACCTCAAATGGTT+TGG | - | chr1.2:52859869-52859888 | MS.gene038083:intron | 50.0% | |
CAAGCAACTGCAAGCTAGTC+AGG | - | chr1.2:52861243-52861262 | MS.gene038083:intron | 50.0% | |
CAGCTGAAAGACAACAGACC+TGG | + | chr1.2:52864675-52864694 | None:intergenic | 50.0% | |
CGGTGGTTGTGAATTGACGT+GGG | - | chr1.2:52864428-52864447 | MS.gene038083:intron | 50.0% | |
CTCATAGGCACATACCGTAC+AGG | - | chr1.2:52862292-52862311 | MS.gene038083:intron | 50.0% | |
GATGAGGGCTAGAATTTGCG+CGG | + | chr1.2:52864929-52864948 | None:intergenic | 50.0% | |
GCAAGTGTCAACACCCATCT+TGG | - | chr1.2:52862636-52862655 | MS.gene038083:intron | 50.0% | |
GCACTTAGGGTGTGTTTGGA+TGG | - | chr1.2:52863214-52863233 | MS.gene038083:intron | 50.0% | |
GGTGGCAGAACAAAGTCGAA+GGG | - | chr1.2:52862779-52862798 | MS.gene038083:intron | 50.0% | |
GTCATGGTCATCGACCTTCT+TGG | - | chr1.2:52859911-52859930 | MS.gene038083:intron | 50.0% | |
TAGAATTTGCGCGGTTCCTC+TGG | + | chr1.2:52864920-52864939 | None:intergenic | 50.0% | |
TAGGCACATACCGTACAGGT+TGG | - | chr1.2:52862296-52862315 | MS.gene038083:intron | 50.0% | |
TCCACTATTGCCGTTCGTTG+AGG | - | chr1.2:52864287-52864306 | MS.gene038083:intron | 50.0% | |
TCCAGGAATCTGTGAAGACC+AGG | - | chr1.2:52859789-52859808 | MS.gene038083:CDS | 50.0% | |
TCGGTGGTTGTGAATTGACG+TGG | - | chr1.2:52864427-52864446 | MS.gene038083:intron | 50.0% | |
TGAACTCTATGTGCGCCAGA+TGG | + | chr1.2:52865518-52865537 | None:intergenic | 50.0% | |
TGGATTGAGGGTTTAGGAGG+GGG | + | chr1.2:52864111-52864130 | None:intergenic | 50.0% | |
TGGTGGCAGAACAAAGTCGA+AGG | - | chr1.2:52862778-52862797 | MS.gene038083:intron | 50.0% | |
TGGTGTGTTCACCGTGATGA+GGG | + | chr1.2:52864944-52864963 | None:intergenic | 50.0% | |
TTGCCGTTCGTTGAGGTTTG+AGG | - | chr1.2:52864294-52864313 | MS.gene038083:intron | 50.0% | |
TTGTAACGACAGCATGGCAC+TGG | - | chr1.2:52864600-52864619 | MS.gene038083:intron | 50.0% | |
TTTCGCAAGGCCGAAGTCAA+TGG | + | chr1.2:52862253-52862272 | None:intergenic | 50.0% | |
! | AGAGTACTCTCACTTCGTCC+TGG | - | chr1.2:52861524-52861543 | MS.gene038083:intron | 50.0% |
! | ATGGAGTGTTTAGGAGGGGA+GGG | - | chr1.2:52863233-52863252 | MS.gene038083:intron | 50.0% |
! | CAACGGCGTCATTTGATTCG+TGG | - | chr1.2:52861325-52861344 | MS.gene038083:intron | 50.0% |
! | CTCCAAACCATTTGAGGTGG+GGG | + | chr1.2:52859874-52859893 | None:intergenic | 50.0% |
! | GCTTTGAGCTCCTCACTATC+AGG | - | chr1.2:52865615-52865634 | MS.gene038083:CDS | 50.0% |
AGAGGAGGTGGCTGTTAAGC+TGG | - | chr1.2:52859285-52859304 | MS.gene038083:CDS | 55.0% | |
AGGAGCTCAAAGCTCCTCAG+AGG | + | chr1.2:52865608-52865627 | None:intergenic | 55.0% | |
AGGTGACCATTCTGGCAGGA+TGG | - | chr1.2:52865475-52865494 | MS.gene038083:intron | 55.0% | |
CTAGAGCTGCCACTACTCTG+TGG | + | chr1.2:52864512-52864531 | None:intergenic | 55.0% | |
CTCTATGTGCGCCAGATGGA+CGG | + | chr1.2:52865514-52865533 | None:intergenic | 55.0% | |
CTGGAATCCCCCACCTCAAA+TGG | - | chr1.2:52859864-52859883 | MS.gene038083:intron | 55.0% | |
CTGGTGTGTTCACCGTGATG+AGG | + | chr1.2:52864945-52864964 | None:intergenic | 55.0% | |
CTTCCAGACTGGGTCCAAGA+AGG | + | chr1.2:52859928-52859947 | None:intergenic | 55.0% | |
GCTCGCAATGGGTCTATGAG+AGG | - | chr1.2:52865569-52865588 | MS.gene038083:CDS | 55.0% | |
GGGGCACAGATAGCTTAACG+TGG | - | chr1.2:52863996-52864015 | MS.gene038083:intron | 55.0% | |
TCCTCAGAGGATCATCACGG+TGG | + | chr1.2:52865595-52865614 | None:intergenic | 55.0% | |
TCTTCCCTGGCAAGGACTGA+GGG | - | chr1.2:52862932-52862951 | MS.gene038083:intron | 55.0% | |
TGAGGGTTTAGGAGGGGGAA+GGG | + | chr1.2:52864106-52864125 | None:intergenic | 55.0% | |
TGTTTAGGAGGGGAGGGGAA+GGG | - | chr1.2:52863239-52863258 | MS.gene038083:intron | 55.0% | |
TTGAGGGTTTAGGAGGGGGA+AGG | + | chr1.2:52864107-52864126 | None:intergenic | 55.0% | |
TTGTGGCCATCCTGCCAGAA+TGG | + | chr1.2:52865484-52865503 | None:intergenic | 55.0% | |
! | CAGAGTAGTGGCAGCTCTAG+AGG | - | chr1.2:52864512-52864531 | MS.gene038083:intron | 55.0% |
! | GATGGAGTGTTTAGGAGGGG+AGG | - | chr1.2:52863232-52863251 | MS.gene038083:intron | 55.0% |
! | GCCTGGTCTTCACAGATTCC+TGG | + | chr1.2:52859793-52859812 | None:intergenic | 55.0% |
! | TGGAGTGTTTAGGAGGGGAG+GGG | - | chr1.2:52863234-52863253 | MS.gene038083:intron | 55.0% |
!! | GACGTGGGCATTGATCATGC+AGG | - | chr1.2:52864443-52864462 | MS.gene038083:intron | 55.0% |
!! | GTAGTGGCAGCTCTAGAGGA+CGG | - | chr1.2:52864516-52864535 | MS.gene038083:intron | 55.0% |
!! | TAGTGGCAGCTCTAGAGGAC+GGG | - | chr1.2:52864517-52864536 | MS.gene038083:intron | 55.0% |
CATAGCGTGCCGTGCCTGTA+AGG | + | chr1.2:52862617-52862636 | None:intergenic | 60.0% | |
CCTCAGGTGACCATTCTGGC+AGG | - | chr1.2:52865471-52865490 | MS.gene038083:intron | 60.0% | |
CCTGCCAGAATGGTCACCTG+AGG | + | chr1.2:52865474-52865493 | None:intergenic | 60.0% | |
CGACCTTCTTGGACCCAGTC+TGG | - | chr1.2:52859922-52859941 | MS.gene038083:intron | 60.0% | |
CTGGCAGGATGGCCACAAGT+GGG | - | chr1.2:52865486-52865505 | MS.gene038083:intron | 60.0% | |
GCCACCGTGATGATCCTCTG+AGG | - | chr1.2:52865591-52865610 | MS.gene038083:CDS | 60.0% | |
GGTTTAGGAGGGGGAAGGGA+GGG | + | chr1.2:52864102-52864121 | None:intergenic | 60.0% | |
GTCTTCCCTGGCAAGGACTG+AGG | - | chr1.2:52862931-52862950 | MS.gene038083:intron | 60.0% | |
GTGTTTAGGAGGGGAGGGGA+AGG | - | chr1.2:52863238-52863257 | MS.gene038083:intron | 60.0% | |
GTTTAGGAGGGGGAAGGGAG+GGG | + | chr1.2:52864101-52864120 | None:intergenic | 60.0% | |
TCTGGCAGGATGGCCACAAG+TGG | - | chr1.2:52865485-52865504 | MS.gene038083:intron | 60.0% | |
TGGCAGGATGGCCACAAGTG+GGG | - | chr1.2:52865487-52865506 | MS.gene038083:intron | 60.0% | |
!! | ACGACAGCATGGCACTGGCA+AGG | - | chr1.2:52864605-52864624 | MS.gene038083:intron | 60.0% |
ACAAGTGGGGGCCGTCCATC+TGG | - | chr1.2:52865500-52865519 | MS.gene038083:intron | 65.0% | |
AGATGGACGGCCCCCACTTG+TGG | + | chr1.2:52865501-52865520 | None:intergenic | 65.0% | |
CCAGCCCTCAGTCCTTGCCA+GGG | + | chr1.2:52862939-52862958 | None:intergenic | 65.0% | |
GGCAGGATGGCCACAAGTGG+GGG | - | chr1.2:52865488-52865507 | MS.gene038083:intron | 65.0% | |
GGGTTTAGGAGGGGGAAGGG+AGG | + | chr1.2:52864103-52864122 | None:intergenic | 65.0% | |
TAGGAGGGGAGGGGAAGGGA+GGG | - | chr1.2:52863243-52863262 | MS.gene038083:intron | 65.0% | |
TCCAGCCCTCAGTCCTTGCC+AGG | + | chr1.2:52862940-52862959 | None:intergenic | 65.0% | |
TTAGGAGGGGAGGGGAAGGG+AGG | - | chr1.2:52863242-52863261 | MS.gene038083:intron | 65.0% | |
AGGAGGGGAGGGGAAGGGAG+GGG | - | chr1.2:52863244-52863263 | MS.gene038083:intron | 70.0% | |
AGGAGGGGGAAGGGAGGGGA+GGG | + | chr1.2:52864097-52864116 | None:intergenic | 70.0% | |
CCCTGGCAAGGACTGAGGGC+TGG | - | chr1.2:52862936-52862955 | MS.gene038083:intron | 70.0% | |
TAGGAGGGGGAAGGGAGGGG+AGG | + | chr1.2:52864098-52864117 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 52859084 | 52865643 | 52859084 | ID=MS.gene038083 |
chr1.2 | mRNA | 52859084 | 52865643 | 52859084 | ID=MS.gene038083.t1;Parent=MS.gene038083 |
chr1.2 | exon | 52865568 | 52865643 | 52865568 | ID=MS.gene038083.t1.exon1;Parent=MS.gene038083.t1 |
chr1.2 | CDS | 52865568 | 52865643 | 52865568 | ID=cds.MS.gene038083.t1;Parent=MS.gene038083.t1 |
chr1.2 | exon | 52865421 | 52865461 | 52865421 | ID=MS.gene038083.t1.exon2;Parent=MS.gene038083.t1 |
chr1.2 | CDS | 52865421 | 52865461 | 52865421 | ID=cds.MS.gene038083.t1;Parent=MS.gene038083.t1 |
chr1.2 | exon | 52864715 | 52864933 | 52864715 | ID=MS.gene038083.t1.exon3;Parent=MS.gene038083.t1 |
chr1.2 | CDS | 52864715 | 52864933 | 52864715 | ID=cds.MS.gene038083.t1;Parent=MS.gene038083.t1 |
chr1.2 | exon | 52864520 | 52864615 | 52864520 | ID=MS.gene038083.t1.exon4;Parent=MS.gene038083.t1 |
chr1.2 | CDS | 52864520 | 52864615 | 52864520 | ID=cds.MS.gene038083.t1;Parent=MS.gene038083.t1 |
chr1.2 | exon | 52862414 | 52862484 | 52862414 | ID=MS.gene038083.t1.exon5;Parent=MS.gene038083.t1 |
chr1.2 | CDS | 52862414 | 52862484 | 52862414 | ID=cds.MS.gene038083.t1;Parent=MS.gene038083.t1 |
chr1.2 | exon | 52862064 | 52862125 | 52862064 | ID=MS.gene038083.t1.exon6;Parent=MS.gene038083.t1 |
chr1.2 | CDS | 52862064 | 52862125 | 52862064 | ID=cds.MS.gene038083.t1;Parent=MS.gene038083.t1 |
chr1.2 | exon | 52861877 | 52861940 | 52861877 | ID=MS.gene038083.t1.exon7;Parent=MS.gene038083.t1 |
chr1.2 | CDS | 52861877 | 52861940 | 52861877 | ID=cds.MS.gene038083.t1;Parent=MS.gene038083.t1 |
chr1.2 | exon | 52861711 | 52861795 | 52861711 | ID=MS.gene038083.t1.exon8;Parent=MS.gene038083.t1 |
chr1.2 | CDS | 52861711 | 52861795 | 52861711 | ID=cds.MS.gene038083.t1;Parent=MS.gene038083.t1 |
chr1.2 | exon | 52860354 | 52860480 | 52860354 | ID=MS.gene038083.t1.exon9;Parent=MS.gene038083.t1 |
chr1.2 | CDS | 52860354 | 52860480 | 52860354 | ID=cds.MS.gene038083.t1;Parent=MS.gene038083.t1 |
chr1.2 | exon | 52860189 | 52860262 | 52860189 | ID=MS.gene038083.t1.exon10;Parent=MS.gene038083.t1 |
chr1.2 | CDS | 52860189 | 52860262 | 52860189 | ID=cds.MS.gene038083.t1;Parent=MS.gene038083.t1 |
chr1.2 | exon | 52860052 | 52860115 | 52860052 | ID=MS.gene038083.t1.exon11;Parent=MS.gene038083.t1 |
chr1.2 | CDS | 52860052 | 52860115 | 52860052 | ID=cds.MS.gene038083.t1;Parent=MS.gene038083.t1 |
chr1.2 | exon | 52859741 | 52859862 | 52859741 | ID=MS.gene038083.t1.exon12;Parent=MS.gene038083.t1 |
chr1.2 | CDS | 52859741 | 52859862 | 52859741 | ID=cds.MS.gene038083.t1;Parent=MS.gene038083.t1 |
chr1.2 | exon | 52859084 | 52859329 | 52859084 | ID=MS.gene038083.t1.exon13;Parent=MS.gene038083.t1 |
chr1.2 | CDS | 52859084 | 52859329 | 52859084 | ID=cds.MS.gene038083.t1;Parent=MS.gene038083.t1 |
Gene Sequence |
Protein sequence |