Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039741.t1 | RHN65795.1 | 80.8 | 396 | 75 | 1 | 1 | 395 | 46 | 441 | 1.60E-170 | 609 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039741.t1 | Q9S7T8 | 52.1 | 388 | 181 | 3 | 11 | 393 | 3 | 390 | 8.6e-109 | 395.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039741.t1 | A0A396IPH6 | 80.8 | 396 | 75 | 1 | 1 | 395 | 46 | 441 | 1.1e-170 | 609.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene039741 | MS.gene031697 | PPI |
| MS.gene006610 | MS.gene039741 | PPI |
| MS.gene039741 | MS.gene045585 | PPI |
| MS.gene065945 | MS.gene039741 | PPI |
| MS.gene039741 | MS.gene065944 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039741.t1 | MTR_3g018740 | 82.383 | 386 | 67 | 1 | 11 | 395 | 3 | 388 | 0.0 | 625 |
| MS.gene039741.t1 | MTR_3g101010 | 71.503 | 386 | 106 | 2 | 11 | 393 | 3 | 387 | 0.0 | 520 |
| MS.gene039741.t1 | MTR_8g027395 | 67.430 | 393 | 124 | 3 | 3 | 393 | 5 | 395 | 0.0 | 516 |
| MS.gene039741.t1 | MTR_2g045980 | 67.692 | 390 | 117 | 5 | 11 | 395 | 3 | 388 | 2.80e-178 | 501 |
| MS.gene039741.t1 | MTR_2g046030 | 66.410 | 390 | 122 | 4 | 11 | 395 | 3 | 388 | 1.91e-176 | 497 |
| MS.gene039741.t1 | MTR_8g027420 | 67.013 | 385 | 110 | 4 | 11 | 393 | 4 | 373 | 2.98e-176 | 496 |
| MS.gene039741.t1 | MTR_4g045707 | 66.057 | 383 | 128 | 2 | 12 | 393 | 5 | 386 | 6.02e-176 | 496 |
| MS.gene039741.t1 | MTR_3g101180 | 63.797 | 395 | 127 | 7 | 13 | 393 | 6 | 398 | 5.35e-169 | 478 |
| MS.gene039741.t1 | MTR_8g461160 | 64.872 | 390 | 129 | 4 | 13 | 395 | 6 | 394 | 7.24e-169 | 478 |
| MS.gene039741.t1 | MTR_3g048000 | 63.255 | 381 | 121 | 3 | 14 | 393 | 28 | 390 | 1.42e-168 | 477 |
| MS.gene039741.t1 | MTR_3g101030 | 63.728 | 397 | 120 | 5 | 18 | 393 | 34 | 427 | 2.52e-167 | 475 |
| MS.gene039741.t1 | MTR_4g088535 | 65.974 | 385 | 109 | 5 | 8 | 390 | 2 | 366 | 3.34e-166 | 471 |
| MS.gene039741.t1 | MTR_7g451890 | 59.398 | 399 | 154 | 3 | 3 | 394 | 4 | 401 | 8.58e-166 | 470 |
| MS.gene039741.t1 | MTR_7g050810 | 60.250 | 400 | 148 | 4 | 5 | 394 | 5 | 403 | 6.50e-165 | 468 |
| MS.gene039741.t1 | MTR_7g047780 | 60.150 | 399 | 151 | 4 | 3 | 394 | 4 | 401 | 3.69e-163 | 464 |
| MS.gene039741.t1 | MTR_4g088525 | 65.193 | 362 | 124 | 2 | 32 | 393 | 8 | 367 | 4.29e-163 | 462 |
| MS.gene039741.t1 | MTR_3g101130 | 61.856 | 388 | 137 | 4 | 12 | 393 | 5 | 387 | 5.45e-163 | 463 |
| MS.gene039741.t1 | MTR_7g050750 | 59.439 | 392 | 151 | 4 | 10 | 394 | 5 | 395 | 4.32e-160 | 456 |
| MS.gene039741.t1 | MTR_3g015620 | 62.725 | 389 | 113 | 4 | 13 | 394 | 16 | 379 | 8.19e-156 | 444 |
| MS.gene039741.t1 | MTR_3g101050 | 64.062 | 384 | 113 | 8 | 16 | 393 | 32 | 396 | 1.36e-149 | 429 |
| MS.gene039741.t1 | MTR_3g102920 | 56.955 | 381 | 118 | 7 | 21 | 393 | 66 | 408 | 1.44e-131 | 384 |
| MS.gene039741.t1 | MTR_3g101190 | 54.569 | 383 | 99 | 6 | 11 | 393 | 3 | 310 | 1.15e-127 | 370 |
| MS.gene039741.t1 | MTR_3g018747 | 72.519 | 262 | 54 | 3 | 137 | 395 | 9 | 255 | 2.34e-125 | 362 |
| MS.gene039741.t1 | MTR_3g101200 | 52.030 | 394 | 158 | 4 | 5 | 393 | 23 | 390 | 4.93e-123 | 361 |
| MS.gene039741.t1 | MTR_3g100995 | 64.822 | 253 | 84 | 2 | 144 | 394 | 14 | 263 | 8.02e-112 | 328 |
| MS.gene039741.t1 | MTR_7g050830 | 52.778 | 324 | 120 | 3 | 3 | 304 | 6 | 318 | 4.11e-111 | 328 |
| MS.gene039741.t1 | MTR_3g015760 | 61.733 | 277 | 98 | 3 | 122 | 394 | 8 | 280 | 1.92e-104 | 310 |
| MS.gene039741.t1 | MTR_3g100010 | 55.449 | 312 | 91 | 3 | 36 | 314 | 40 | 336 | 2.34e-104 | 312 |
| MS.gene039741.t1 | MTR_3g111160 | 68.224 | 214 | 59 | 2 | 185 | 393 | 9 | 218 | 4.54e-93 | 278 |
| MS.gene039741.t1 | MTR_3g114310 | 42.092 | 392 | 210 | 10 | 14 | 392 | 20 | 407 | 5.35e-86 | 267 |
| MS.gene039741.t1 | MTR_3g100520 | 61.468 | 218 | 71 | 3 | 178 | 393 | 1 | 207 | 3.95e-84 | 255 |
| MS.gene039741.t1 | MTR_3g101110 | 58.051 | 236 | 67 | 2 | 140 | 369 | 71 | 280 | 9.80e-83 | 254 |
| MS.gene039741.t1 | MTR_2g046410 | 59.244 | 238 | 80 | 5 | 163 | 395 | 124 | 349 | 2.54e-80 | 251 |
| MS.gene039741.t1 | MTR_3g099970 | 59.391 | 197 | 62 | 2 | 137 | 333 | 20 | 198 | 1.45e-72 | 225 |
| MS.gene039741.t1 | MTR_3g111150 | 63.068 | 176 | 41 | 1 | 15 | 190 | 1 | 152 | 9.80e-69 | 214 |
| MS.gene039741.t1 | MTR_3g101150 | 64.557 | 158 | 48 | 3 | 243 | 393 | 1 | 157 | 8.21e-61 | 194 |
| MS.gene039741.t1 | MTR_3g102870 | 59.394 | 165 | 63 | 2 | 200 | 361 | 1 | 164 | 2.57e-59 | 191 |
| MS.gene039741.t1 | MTR_3g101020 | 53.226 | 186 | 58 | 2 | 211 | 394 | 1 | 159 | 3.85e-54 | 177 |
| MS.gene039741.t1 | MTR_3g100990 | 73.600 | 125 | 33 | 0 | 13 | 137 | 5 | 129 | 1.47e-52 | 182 |
| MS.gene039741.t1 | MTR_4g093550 | 65.909 | 88 | 30 | 0 | 9 | 96 | 2 | 89 | 1.01e-27 | 105 |
| MS.gene039741.t1 | MTR_6g046890 | 64.384 | 73 | 21 | 1 | 32 | 99 | 18 | 90 | 8.12e-20 | 85.5 |
| MS.gene039741.t1 | MTR_3g101140 | 60.811 | 74 | 24 | 2 | 324 | 393 | 42 | 114 | 1.31e-18 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039741.t1 | AT1G47710 | 52.062 | 388 | 181 | 3 | 11 | 393 | 3 | 390 | 2.21e-140 | 405 |
| MS.gene039741.t1 | AT1G47710 | 52.062 | 388 | 181 | 3 | 11 | 393 | 30 | 417 | 1.18e-139 | 405 |
| MS.gene039741.t1 | AT3G45220 | 48.469 | 392 | 188 | 7 | 11 | 392 | 3 | 390 | 3.85e-120 | 354 |
| MS.gene039741.t1 | AT2G25240 | 48.593 | 391 | 181 | 6 | 11 | 392 | 3 | 382 | 6.37e-119 | 350 |
| MS.gene039741.t1 | AT2G26390 | 47.462 | 394 | 185 | 6 | 11 | 392 | 3 | 386 | 1.18e-114 | 340 |
| MS.gene039741.t1 | AT1G64030 | 41.688 | 391 | 197 | 6 | 11 | 392 | 3 | 371 | 2.82e-97 | 295 |
| MS.gene039741.t1 | AT2G14540 | 42.714 | 398 | 195 | 7 | 4 | 392 | 24 | 397 | 5.17e-94 | 288 |
| MS.gene039741.t1 | AT2G35580 | 42.711 | 391 | 193 | 8 | 11 | 392 | 3 | 371 | 5.05e-92 | 281 |
| MS.gene039741.t1 | AT1G62170 | 39.541 | 392 | 203 | 6 | 11 | 392 | 64 | 431 | 1.93e-91 | 282 |
| MS.gene039741.t1 | AT1G62170 | 36.643 | 423 | 201 | 7 | 13 | 392 | 66 | 464 | 2.63e-84 | 265 |
| MS.gene039741.t1 | AT1G64010 | 44.037 | 218 | 96 | 5 | 178 | 392 | 1 | 195 | 1.32e-51 | 171 |
| MS.gene039741.t1 | AT1G64010 | 44.335 | 203 | 87 | 5 | 193 | 392 | 2 | 181 | 3.04e-46 | 157 |
| MS.gene039741.t1 | AT1G62160 | 38.202 | 178 | 87 | 5 | 217 | 392 | 62 | 218 | 2.22e-29 | 114 |
| MS.gene039741.t1 | AT1G63280 | 47.458 | 118 | 58 | 2 | 134 | 249 | 5 | 120 | 1.94e-27 | 105 |
| MS.gene039741.t1 | AT1G51330 | 46.903 | 113 | 55 | 2 | 135 | 243 | 29 | 140 | 2.47e-22 | 94.0 |
| MS.gene039741.t1 | AT1G64020 | 31.250 | 112 | 74 | 3 | 18 | 127 | 10 | 120 | 1.12e-11 | 62.0 |
Find 81 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATTAAAGAAGTGAATTTA+TGG | 0.223064 | 3.3:+11330084 | MS.gene039741:CDS |
| GAGGAAGAAGTTCTTTAATA+AGG | 0.287252 | 3.3:-11330127 | None:intergenic |
| GTTGAGATCATCGGTGGATT+TGG | 0.293645 | 3.3:-11328222 | None:intergenic |
| GGACAAAGTAGATTTATAAT+TGG | 0.309459 | 3.3:-11328381 | None:intergenic |
| CAATGCTAACAGTCCATCTT+TGG | 0.352985 | 3.3:-11330411 | None:intergenic |
| ACTGGAACCATTCTCTTTGT+TGG | 0.353661 | 3.3:+11330800 | MS.gene039741:CDS |
| GCTAATGCACTCTACTATAA+AGG | 0.363822 | 3.3:+11330185 | MS.gene039741:CDS |
| CTCTCAGACGCCGCTTTCAC+TGG | 0.370831 | 3.3:+11328275 | MS.gene039741:CDS |
| TGAAGGAAGGTTGAAGAGAA+AGG | 0.378765 | 3.3:-11328343 | None:intergenic |
| CTTCGTCTTCTTTATAAGAA+AGG | 0.383719 | 3.3:+11330344 | MS.gene039741:CDS |
| GATTAAAGAAGTGAATTTAT+GGG | 0.386003 | 3.3:+11330085 | MS.gene039741:CDS |
| TCTCATATGTTGAAGGAGTT+AGG | 0.397032 | 3.3:+11330548 | MS.gene039741:CDS |
| ATGGTGGACTCTTCTCTTGT+TGG | 0.400037 | 3.3:+11330608 | MS.gene039741:CDS |
| TTCTTTCGAGAACAGATGTT+TGG | 0.401374 | 3.3:-11328090 | None:intergenic |
| AACAGTCCATCTTTGGCATC+TGG | 0.409162 | 3.3:-11330404 | None:intergenic |
| TGCCGAGGGAAACATTTGTT+TGG | 0.416643 | 3.3:-11328064 | None:intergenic |
| TGAAACTTCTCATATGTTGA+AGG | 0.426857 | 3.3:+11330541 | MS.gene039741:CDS |
| GGAATCAGACGTTTGATGTA+TGG | 0.438429 | 3.3:+11330213 | MS.gene039741:CDS |
| GAAGGAAGGTTGAAGAGAAA+GGG | 0.450222 | 3.3:-11328342 | None:intergenic |
| TTTCTTCCAGATGCCAAAGA+TGG | 0.454297 | 3.3:+11330398 | MS.gene039741:CDS |
| TTCATTGAAGTAAATGAAGA+AGG | 0.457204 | 3.3:+11330668 | MS.gene039741:CDS |
| GTTAAGCTATCAACCGATCT+TGG | 0.459359 | 3.3:-11330149 | None:intergenic |
| GTTAGCATTGGTGGAGAAGT+TGG | 0.459448 | 3.3:+11330424 | MS.gene039741:CDS |
| AGATGGACTGTTAGCATTGG+TGG | 0.461266 | 3.3:+11330415 | MS.gene039741:CDS |
| GAAGCTGCTGCAGCTAGTGC+TGG | 0.463886 | 3.3:+11330695 | MS.gene039741:CDS |
| TCACTGAGCTTCCATTCAAA+AGG | 0.472058 | 3.3:-11330259 | None:intergenic |
| CAGACGCCGCTTTCACTGGC+GGG | 0.477109 | 3.3:+11328279 | MS.gene039741:CDS |
| CAATGATACTTAGCACAACT+TGG | 0.487762 | 3.3:-11328148 | None:intergenic |
| AGACTATAGTGTAGTAAGTC+AGG | 0.490539 | 3.3:-11330455 | None:intergenic |
| GACGTTTGATGTATGGAAAA+CGG | 0.491740 | 3.3:+11330220 | MS.gene039741:CDS |
| CATCCCCTCGGTAGTCATGA+AGG | 0.493267 | 3.3:-11330288 | None:intergenic |
| CTAATTAGAGAAGATTCGAC+TGG | 0.496334 | 3.3:+11330782 | MS.gene039741:CDS |
| TATCATTGCGGCTGGCTCTG+AGG | 0.502501 | 3.3:+11328163 | MS.gene039741:CDS |
| CTCTGTTGATTTCATAACCA+AGG | 0.503875 | 3.3:+11328403 | MS.gene039741:CDS |
| ATCATTGCGGCTGGCTCTGA+GGG | 0.505022 | 3.3:+11328164 | MS.gene039741:CDS |
| TCTCTAATTAGAAATAAGAA+AGG | 0.509129 | 3.3:-11330770 | None:intergenic |
| CACTCTACTATAAAGGAGCA+TGG | 0.515652 | 3.3:+11330192 | MS.gene039741:CDS |
| TGCTAAGATCATTGATCAAG+AGG | 0.517318 | 3.3:-11330836 | None:intergenic |
| AGAACTTCTTCCTCCAAGAT+CGG | 0.523770 | 3.3:+11330136 | MS.gene039741:CDS |
| GTCAAACCTCCAGGAGTGAA+AGG | 0.524050 | 3.3:-11330581 | None:intergenic |
| TCACCTACTTCTGCTTCAGC+AGG | 0.528408 | 3.3:-11330482 | None:intergenic |
| CACTTGTCCAACAAAGAGAA+TGG | 0.528533 | 3.3:-11330807 | None:intergenic |
| CGTCCTGCTGAAGCAGAAGT+AGG | 0.536267 | 3.3:+11330479 | MS.gene039741:CDS |
| CTCTAATTAGAAATAAGAAA+GGG | 0.536391 | 3.3:-11330769 | None:intergenic |
| TTTGGTTGGTGATTGATTCG+TGG | 0.536866 | 3.3:-11328046 | None:intergenic |
| TCAGACGCCGCTTTCACTGG+CGG | 0.550246 | 3.3:+11328278 | MS.gene039741:CDS |
| GCGAGGCCCGCCAGTGAAAG+CGG | 0.556128 | 3.3:-11328285 | None:intergenic |
| GAAATATATTAGAAACAGAA+AGG | 0.558448 | 3.3:-11330637 | None:intergenic |
| GTGCTAAGTATCATTGCGGC+TGG | 0.566527 | 3.3:+11328155 | MS.gene039741:CDS |
| GAGGGAAACATTTGTTTGGT+TGG | 0.569951 | 3.3:-11328060 | None:intergenic |
| AAGCTATCAACCGATCTTGG+AGG | 0.570822 | 3.3:-11330146 | None:intergenic |
| AACCAAACAAATGTTTCCCT+CGG | 0.575261 | 3.3:+11328062 | MS.gene039741:CDS |
| GGCGAGGTTGTTGAGATCAT+CGG | 0.582316 | 3.3:-11328231 | None:intergenic |
| ATGAATAAACTGCATCCCCT+CGG | 0.585021 | 3.3:-11330300 | None:intergenic |
| GTCGAGAAGCTGTTGTTGTG+TGG | 0.586119 | 3.3:-11328189 | None:intergenic |
| TTTGAATGGAAGCTCAGTGA+AGG | 0.587122 | 3.3:+11330262 | MS.gene039741:CDS |
| TGCATTAGCAAAGATGAGGC+GGG | 0.588872 | 3.3:-11330171 | None:intergenic |
| AACAAATGTTTCCCTCGGCA+TGG | 0.592617 | 3.3:+11328067 | MS.gene039741:CDS |
| ACAGATGTTTGGCCATGCCG+AGG | 0.599139 | 3.3:-11328079 | None:intergenic |
| CAGATGTTTGGCCATGCCGA+GGG | 0.601831 | 3.3:-11328078 | None:intergenic |
| TCGAGAAGCTGTTGTTGTGT+GGG | 0.605173 | 3.3:-11328188 | None:intergenic |
| GACGATAGAAACAAGGTGAG+AGG | 0.606218 | 3.3:-11328252 | None:intergenic |
| AGCACAACTTGGAGCAACAA+TGG | 0.608333 | 3.3:-11328137 | None:intergenic |
| ATCCCCTCGGTAGTCATGAA+GGG | 0.614506 | 3.3:-11330287 | None:intergenic |
| TATGTTGAAGGAGTTAGGAG+TGG | 0.615125 | 3.3:+11330553 | MS.gene039741:CDS |
| CTGAGAGGACGATAGAAACA+AGG | 0.615824 | 3.3:-11328259 | None:intergenic |
| GTGCATTAGCAAAGATGAGG+CGG | 0.619571 | 3.3:-11330172 | None:intergenic |
| GATCATCGGTGGATTTGGAA+CGG | 0.619697 | 3.3:-11328217 | None:intergenic |
| CAGTGAAAGCGGCGTCTGAG+AGG | 0.622496 | 3.3:-11328274 | None:intergenic |
| GTTCCCTTCATGACTACCGA+GGG | 0.638567 | 3.3:+11330284 | MS.gene039741:CDS |
| AGAGTGCATTAGCAAAGATG+AGG | 0.641780 | 3.3:-11330175 | None:intergenic |
| CAAAGATGGACTGTTAGCAT+TGG | 0.645848 | 3.3:+11330412 | MS.gene039741:CDS |
| CATCGGTGGATTTGGAACGG+AGG | 0.663201 | 3.3:-11328214 | None:intergenic |
| GAGGTTGTTGAGATCATCGG+TGG | 0.666044 | 3.3:-11328228 | None:intergenic |
| TAGAAACAAGGTGAGAGGCG+AGG | 0.684792 | 3.3:-11328247 | None:intergenic |
| GGTTCCCTTCATGACTACCG+AGG | 0.692485 | 3.3:+11330283 | MS.gene039741:CDS |
| CTTGGTTATGAAATCAACAG+AGG | 0.695380 | 3.3:-11328402 | None:intergenic |
| ATACACCATCAACAAAAGAG+AGG | 0.697514 | 3.3:-11328307 | None:intergenic |
| CCATCAACAAAAGAGAGGCG+AGG | 0.704628 | 3.3:-11328302 | None:intergenic |
| AGTTGTGCTAAGTATCATTG+CGG | 0.711501 | 3.3:+11328151 | MS.gene039741:CDS |
| TTCCCTTCATGACTACCGAG+GGG | 0.739663 | 3.3:+11330285 | MS.gene039741:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATAATTAATGTAGT+TGG | + | chr3.3:11329379-11329398 | MS.gene039741:intron | 10.0% |
| !! | AAAAAGATGTATAATAAATA+GGG | + | chr3.3:11329346-11329365 | MS.gene039741:intron | 10.0% |
| !! | AACATAATATTTAATAAGTA+TGG | + | chr3.3:11329003-11329022 | MS.gene039741:intron | 10.0% |
| !! | ATTTCATGTAAATTAATTTA+AGG | + | chr3.3:11328522-11328541 | MS.gene039741:intron | 10.0% |
| !! | TTTCATGTAAATTAATTTAA+GGG | + | chr3.3:11328523-11328542 | MS.gene039741:intron | 10.0% |
| !!! | TGTTTTTATTTTATTTTTGA+TGG | - | chr3.3:11328488-11328507 | None:intergenic | 10.0% |
| !!! | TTACTAATAAATTTTAAGTT+TGG | + | chr3.3:11329671-11329690 | MS.gene039741:intron | 10.0% |
| !! | AAAAGATGTATAATAAATAG+GGG | + | chr3.3:11329347-11329366 | MS.gene039741:intron | 15.0% |
| !! | AATATGTTTGTAATTACTAT+TGG | + | chr3.3:11329252-11329271 | MS.gene039741:intron | 15.0% |
| !! | AATTTACATGAAATAAAAAC+AGG | - | chr3.3:11328516-11328535 | None:intergenic | 15.0% |
| !! | GAAAAAGATGTATAATAAAT+AGG | + | chr3.3:11329345-11329364 | MS.gene039741:intron | 15.0% |
| !! | GATTTAATTAAACCAATAAA+AGG | + | chr3.3:11329967-11329986 | MS.gene039741:intron | 15.0% |
| !! | GTGAAAAAAACAAAAAAAAA+GGG | - | chr3.3:11328445-11328464 | None:intergenic | 15.0% |
| !! | TGTGAAAAAAACAAAAAAAA+AGG | - | chr3.3:11328446-11328465 | None:intergenic | 15.0% |
| !!! | ACTGATTTTTAAATTTGATA+TGG | + | chr3.3:11330043-11330062 | MS.gene039741:intron | 15.0% |
| !!! | ATTTGTAGTTAAAACTATTT+TGG | - | chr3.3:11329125-11329144 | None:intergenic | 15.0% |
| !!! | TATTAAAATGTTTTAAGTAC+TGG | + | chr3.3:11329607-11329626 | MS.gene039741:intron | 15.0% |
| !! | CTCTAATTAGAAATAAGAAA+GGG | - | chr3.3:11330772-11330791 | None:intergenic | 20.0% |
| !! | GAAATATATTAGAAACAGAA+AGG | - | chr3.3:11330640-11330659 | None:intergenic | 20.0% |
| !! | GACAAAAAAAATTCTCAAAA+GGG | + | chr3.3:11329429-11329448 | MS.gene039741:intron | 20.0% |
| !! | GATTAAAGAAGTGAATTTAT+GGG | + | chr3.3:11330085-11330104 | MS.gene039741:CDS | 20.0% |
| !! | TCTCTAATTAGAAATAAGAA+AGG | - | chr3.3:11330773-11330792 | None:intergenic | 20.0% |
| !! | TGATTAAAGAAGTGAATTTA+TGG | + | chr3.3:11330084-11330103 | MS.gene039741:CDS | 20.0% |
| !! | TTCTTTAATCAATGTAGAAT+TGG | - | chr3.3:11328577-11328596 | None:intergenic | 20.0% |
| !!! | AACATAAGAAAACCTTTTAT+TGG | - | chr3.3:11329982-11330001 | None:intergenic | 20.0% |
| !!! | ATGACTTGCTATATTTAATT+AGG | + | chr3.3:11329738-11329757 | MS.gene039741:intron | 20.0% |
| !!! | ATTTGATATGGTTTTATAGT+CGG | + | chr3.3:11330055-11330074 | MS.gene039741:intron | 20.0% |
| !!! | TACTATAGATTTTTTTGAAG+AGG | - | chr3.3:11328641-11328660 | None:intergenic | 20.0% |
| !!! | TCATATGAAATTTTGAATCT+TGG | - | chr3.3:11330518-11330537 | None:intergenic | 20.0% |
| ! | ATGAAGAAGAAGATGAAATT+AGG | + | chr3.3:11328892-11328911 | MS.gene039741:intron | 25.0% |
| ! | GGACAAAAAAAATTCTCAAA+AGG | + | chr3.3:11329428-11329447 | MS.gene039741:intron | 25.0% |
| ! | GGACAAAGTAGATTTATAAT+TGG | - | chr3.3:11328384-11328403 | None:intergenic | 25.0% |
| ! | TGAAGAAGAAGATGAAATTA+GGG | + | chr3.3:11328893-11328912 | MS.gene039741:intron | 25.0% |
| ! | TGATGCTAGAAAACAATAAA+GGG | - | chr3.3:11329920-11329939 | None:intergenic | 25.0% |
| ! | TTCATTGAAGTAAATGAAGA+AGG | + | chr3.3:11330668-11330687 | MS.gene039741:CDS | 25.0% |
| ! | TTGATGCTAGAAAACAATAA+AGG | - | chr3.3:11329921-11329940 | None:intergenic | 25.0% |
| !! | ATTATGTTTTCCCATTTCAT+TGG | - | chr3.3:11328991-11329010 | None:intergenic | 25.0% |
| !! | TATGATTTTCACCTTTTGAA+TGG | + | chr3.3:11330248-11330267 | MS.gene039741:CDS | 25.0% |
| !! | TCAAAAGGGTCTTATAATTA+GGG | + | chr3.3:11329443-11329462 | MS.gene039741:intron | 25.0% |
| !! | TTATGTTTTCCCATTTCATT+GGG | - | chr3.3:11328990-11329009 | None:intergenic | 25.0% |
| !!! | ATTCCCGTTATTTTTTCAAA+AGG | - | chr3.3:11329209-11329228 | None:intergenic | 25.0% |
| !!! | ATTTTATCCTTTAAGAGAGA+TGG | + | chr3.3:11329282-11329301 | MS.gene039741:intron | 25.0% |
| !!! | GATCTTCTGTTTTTTCTAAT+GGG | + | chr3.3:11328950-11328969 | MS.gene039741:intron | 25.0% |
| !!! | TTCCCGTTATTTTTTCAAAA+GGG | - | chr3.3:11329208-11329227 | None:intergenic | 25.0% |
| AATGTAGTTGGAAATAGCAA+AGG | + | chr3.3:11329391-11329410 | MS.gene039741:intron | 30.0% | |
| AATTGCGAATTATGTGACTA+TGG | + | chr3.3:11329870-11329889 | MS.gene039741:intron | 30.0% | |
| AGAAGAATTAGGTACGTATA+GGG | - | chr3.3:11329806-11329825 | None:intergenic | 30.0% | |
| AGGGTAATTAGTTATGAAGT+TGG | + | chr3.3:11328912-11328931 | MS.gene039741:intron | 30.0% | |
| ATGTAGTTGGAAATAGCAAA+GGG | + | chr3.3:11329392-11329411 | MS.gene039741:intron | 30.0% | |
| ATTATGTGACTATGGTACTA+AGG | + | chr3.3:11329878-11329897 | MS.gene039741:intron | 30.0% | |
| CAATGTAGAATTGGTATACT+AGG | - | chr3.3:11328568-11328587 | None:intergenic | 30.0% | |
| CTTCGTCTTCTTTATAAGAA+AGG | + | chr3.3:11330344-11330363 | MS.gene039741:CDS | 30.0% | |
| GAGGAAGAAGTTCTTTAATA+AGG | - | chr3.3:11330130-11330149 | None:intergenic | 30.0% | |
| GGGTAATTAGTTATGAAGTT+GGG | + | chr3.3:11328913-11328932 | MS.gene039741:intron | 30.0% | |
| TCAAAAGGGTCCTATAATTA+GGG | - | chr3.3:11329194-11329213 | None:intergenic | 30.0% | |
| TGAAACTTCTCATATGTTGA+AGG | + | chr3.3:11330541-11330560 | MS.gene039741:CDS | 30.0% | |
| TTAACTACAAATGCTAGCAT+GGG | + | chr3.3:11329133-11329152 | MS.gene039741:intron | 30.0% | |
| TTCAAAAGGGTCCTATAATT+AGG | - | chr3.3:11329195-11329214 | None:intergenic | 30.0% | |
| TTTAACTACAAATGCTAGCA+TGG | + | chr3.3:11329132-11329151 | MS.gene039741:intron | 30.0% | |
| ! | AATAACGGGAATTAAGATAG+TGG | + | chr3.3:11329217-11329236 | MS.gene039741:intron | 30.0% |
| ! | CTCAAAAGGGTCTTATAATT+AGG | + | chr3.3:11329442-11329461 | MS.gene039741:intron | 30.0% |
| !! | GACCCTTTTGAAAAAATAAC+GGG | + | chr3.3:11329203-11329222 | MS.gene039741:intron | 30.0% |
| !! | GGACCCTTTTGAAAAAATAA+CGG | + | chr3.3:11329202-11329221 | MS.gene039741:intron | 30.0% |
| !!! | GGATCTTCTGTTTTTTCTAA+TGG | + | chr3.3:11328949-11328968 | MS.gene039741:intron | 30.0% |
| !!! | TTTTTTCTAATGGGCTTTTC+TGG | + | chr3.3:11328959-11328978 | MS.gene039741:intron | 30.0% |
| AAACCAACCATCTCTCTTAA+AGG | - | chr3.3:11329292-11329311 | None:intergenic | 35.0% | |
| AACCAAACAAATGTTTCCCT+CGG | + | chr3.3:11328062-11328081 | MS.gene039741:CDS | 35.0% | |
| AGACTATAGTGTAGTAAGTC+AGG | - | chr3.3:11330458-11330477 | None:intergenic | 35.0% | |
| AGTTGTGCTAAGTATCATTG+CGG | + | chr3.3:11328151-11328170 | MS.gene039741:CDS | 35.0% | |
| ATACACCATCAACAAAAGAG+AGG | - | chr3.3:11328310-11328329 | None:intergenic | 35.0% | |
| CAATGATACTTAGCACAACT+TGG | - | chr3.3:11328151-11328170 | None:intergenic | 35.0% | |
| CACATAATTCGCTAGATTGA+CGG | + | chr3.3:11328672-11328691 | MS.gene039741:intron | 35.0% | |
| CTAATTAGAGAAGATTCGAC+TGG | + | chr3.3:11330782-11330801 | MS.gene039741:CDS | 35.0% | |
| CTTGGTTATGAAATCAACAG+AGG | - | chr3.3:11328405-11328424 | None:intergenic | 35.0% | |
| GAAGAATTAGGTACGTATAG+GGG | - | chr3.3:11329805-11329824 | None:intergenic | 35.0% | |
| GACGTTTGATGTATGGAAAA+CGG | + | chr3.3:11330220-11330239 | MS.gene039741:CDS | 35.0% | |
| GAGAAGAATTAGGTACGTAT+AGG | - | chr3.3:11329807-11329826 | None:intergenic | 35.0% | |
| GCTAATGCACTCTACTATAA+AGG | + | chr3.3:11330185-11330204 | MS.gene039741:CDS | 35.0% | |
| GTAATACTAGTACTACGAAC+CGG | + | chr3.3:11329760-11329779 | MS.gene039741:intron | 35.0% | |
| TCTCATATGTTGAAGGAGTT+AGG | + | chr3.3:11330548-11330567 | MS.gene039741:CDS | 35.0% | |
| TGCTAGAAAACAATAAAGGG+AGG | - | chr3.3:11329917-11329936 | None:intergenic | 35.0% | |
| TGTAGTTGGAAATAGCAAAG+GGG | + | chr3.3:11329393-11329412 | MS.gene039741:intron | 35.0% | |
| TTCTTTCGAGAACAGATGTT+TGG | - | chr3.3:11328093-11328112 | None:intergenic | 35.0% | |
| ! | AAGGGTCTTATAATTAGGGA+CGG | + | chr3.3:11329447-11329466 | MS.gene039741:intron | 35.0% |
| ! | AGCAAAGGGGTCTTATAAAA+AGG | + | chr3.3:11329406-11329425 | MS.gene039741:intron | 35.0% |
| ! | GCAAAGGGGTCTTATAAAAA+GGG | + | chr3.3:11329407-11329426 | MS.gene039741:intron | 35.0% |
| ! | GGAAGACAAGATTCTTTTGA+AGG | - | chr3.3:11328363-11328382 | None:intergenic | 35.0% |
| ! | TAACAAAGTGTTTCGTCACA+TGG | - | chr3.3:11328614-11328633 | None:intergenic | 35.0% |
| ! | TATCCTTTAAGAGAGATGGT+TGG | + | chr3.3:11329286-11329305 | MS.gene039741:intron | 35.0% |
| !! | CTCTGTTGATTTCATAACCA+AGG | + | chr3.3:11328403-11328422 | MS.gene039741:CDS | 35.0% |
| !! | GACAAGATTCTTTTGAAGGA+AGG | - | chr3.3:11328359-11328378 | None:intergenic | 35.0% |
| !! | TAAGTATGGCTTTGTCTTTG+TGG | + | chr3.3:11329017-11329036 | MS.gene039741:intron | 35.0% |
| !!! | CTCTTTTGTTGATGGTGTAT+GGG | + | chr3.3:11328310-11328329 | MS.gene039741:CDS | 35.0% |
| !!! | TCTCTTTTGTTGATGGTGTA+TGG | + | chr3.3:11328309-11328328 | MS.gene039741:CDS | 35.0% |
| AAGGAAGAACGTCGTATTAC+CGG | + | chr3.3:11328825-11328844 | MS.gene039741:intron | 40.0% | |
| AAGGGTCCTATAATTAGGGA+CGG | - | chr3.3:11329190-11329209 | None:intergenic | 40.0% | |
| ACTGGAACCATTCTCTTTGT+TGG | + | chr3.3:11330800-11330819 | MS.gene039741:CDS | 40.0% | |
| AGAACTTCTTCCTCCAAGAT+CGG | + | chr3.3:11330136-11330155 | MS.gene039741:CDS | 40.0% | |
| AGAGTGCATTAGCAAAGATG+AGG | - | chr3.3:11330178-11330197 | None:intergenic | 40.0% | |
| ATGAATAAACTGCATCCCCT+CGG | - | chr3.3:11330303-11330322 | None:intergenic | 40.0% | |
| ATTACCGGAAAAAACAGGTC+TGG | + | chr3.3:11328840-11328859 | MS.gene039741:intron | 40.0% | |
| CAATGCTAACAGTCCATCTT+TGG | - | chr3.3:11330414-11330433 | None:intergenic | 40.0% | |
| CACATAATTCGCAATTCGTG+TGG | - | chr3.3:11329866-11329885 | None:intergenic | 40.0% | |
| CACTCTACTATAAAGGAGCA+TGG | + | chr3.3:11330192-11330211 | MS.gene039741:CDS | 40.0% | |
| CACTTGTCCAACAAAGAGAA+TGG | - | chr3.3:11330810-11330829 | None:intergenic | 40.0% | |
| CGTACCTAATTCTTCTCATG+TGG | + | chr3.3:11329810-11329829 | MS.gene039741:intron | 40.0% | |
| GAAGGAAGGTTGAAGAGAAA+GGG | - | chr3.3:11328345-11328364 | None:intergenic | 40.0% | |
| GAGGGAAACATTTGTTTGGT+TGG | - | chr3.3:11328063-11328082 | None:intergenic | 40.0% | |
| GGAATCAGACGTTTGATGTA+TGG | + | chr3.3:11330213-11330232 | MS.gene039741:CDS | 40.0% | |
| GTCGTATTACCGGAAAAAAC+AGG | + | chr3.3:11328835-11328854 | MS.gene039741:intron | 40.0% | |
| GTTAAGCTATCAACCGATCT+TGG | - | chr3.3:11330152-11330171 | None:intergenic | 40.0% | |
| TACGCCACATGAGAAGAATT+AGG | - | chr3.3:11329817-11329836 | None:intergenic | 40.0% | |
| TATGTTGAAGGAGTTAGGAG+TGG | + | chr3.3:11330553-11330572 | MS.gene039741:CDS | 40.0% | |
| TCACTGAGCTTCCATTCAAA+AGG | - | chr3.3:11330262-11330281 | None:intergenic | 40.0% | |
| TCCTGGAGGTTTGACAAAAA+TGG | + | chr3.3:11330589-11330608 | MS.gene039741:CDS | 40.0% | |
| TGAAGGAAGGTTGAAGAGAA+AGG | - | chr3.3:11328346-11328365 | None:intergenic | 40.0% | |
| TGGAGGTTTGACAAAAATGG+TGG | + | chr3.3:11330592-11330611 | MS.gene039741:CDS | 40.0% | |
| TTTCTTCCAGATGCCAAAGA+TGG | + | chr3.3:11330398-11330417 | MS.gene039741:CDS | 40.0% | |
| TTTGAATGGAAGCTCAGTGA+AGG | + | chr3.3:11330262-11330281 | MS.gene039741:CDS | 40.0% | |
| ! | CTGGTTTGACCCAATGAAAT+GGG | + | chr3.3:11328978-11328997 | MS.gene039741:intron | 40.0% |
| ! | TAGCATGGGTTCACTGTTTT+TGG | + | chr3.3:11329147-11329166 | MS.gene039741:intron | 40.0% |
| ! | TATAGAGCTTTGGTACGTTC+CGG | - | chr3.3:11329782-11329801 | None:intergenic | 40.0% |
| ! | TCTGGTTTGACCCAATGAAA+TGG | + | chr3.3:11328977-11328996 | MS.gene039741:intron | 40.0% |
| !! | ACCATTTTTGTCAAACCTCC+AGG | - | chr3.3:11330593-11330612 | None:intergenic | 40.0% |
| !! | CAAAGATGGACTGTTAGCAT+TGG | + | chr3.3:11330412-11330431 | MS.gene039741:CDS | 40.0% |
| !! | TTTGGTTGGTGATTGATTCG+TGG | - | chr3.3:11328049-11328068 | None:intergenic | 40.0% |
| AACAAATGTTTCCCTCGGCA+TGG | + | chr3.3:11328067-11328086 | MS.gene039741:CDS | 45.0% | |
| AACAGTCCATCTTTGGCATC+TGG | - | chr3.3:11330407-11330426 | None:intergenic | 45.0% | |
| AAGCTATCAACCGATCTTGG+AGG | - | chr3.3:11330149-11330168 | None:intergenic | 45.0% | |
| AGCACAACTTGGAGCAACAA+TGG | - | chr3.3:11328140-11328159 | None:intergenic | 45.0% | |
| CTACCTCCGTCCCTAATTAT+AGG | + | chr3.3:11329181-11329200 | MS.gene039741:intron | 45.0% | |
| CTGAGAGGACGATAGAAACA+AGG | - | chr3.3:11328262-11328281 | None:intergenic | 45.0% | |
| GAAAAAACAGGTCTGGTAGG+CGG | + | chr3.3:11328847-11328866 | MS.gene039741:intron | 45.0% | |
| GACGATAGAAACAAGGTGAG+AGG | - | chr3.3:11328255-11328274 | None:intergenic | 45.0% | |
| GAGCTGTGTAACACAAACCT+TGG | - | chr3.3:11328423-11328442 | None:intergenic | 45.0% | |
| GTGCATTAGCAAAGATGAGG+CGG | - | chr3.3:11330175-11330194 | None:intergenic | 45.0% | |
| TCGAGAAGCTGTTGTTGTGT+GGG | - | chr3.3:11328191-11328210 | None:intergenic | 45.0% | |
| TGCATTAGCAAAGATGAGGC+GGG | - | chr3.3:11330174-11330193 | None:intergenic | 45.0% | |
| TGCCGAGGGAAACATTTGTT+TGG | - | chr3.3:11328067-11328086 | None:intergenic | 45.0% | |
| TGGGCTGAAAAAGAGACGAA+TGG | + | chr3.3:11330104-11330123 | MS.gene039741:CDS | 45.0% | |
| TTCGTCACATGGCACATACA+TGG | - | chr3.3:11328603-11328622 | None:intergenic | 45.0% | |
| ! | CGTATAGGGGTATAGAGCTT+TGG | - | chr3.3:11329792-11329811 | None:intergenic | 45.0% |
| ! | GATCATCGGTGGATTTGGAA+CGG | - | chr3.3:11328220-11328239 | None:intergenic | 45.0% |
| ! | GGTCTTATAATTAGGGACGG+AGG | + | chr3.3:11329450-11329469 | MS.gene039741:intron | 45.0% |
| ! | GTTGAGATCATCGGTGGATT+TGG | - | chr3.3:11328225-11328244 | None:intergenic | 45.0% |
| ! | GTTTTACCTTTCACTCCTGG+AGG | + | chr3.3:11330575-11330594 | MS.gene039741:CDS | 45.0% |
| !! | AGATGGACTGTTAGCATTGG+TGG | + | chr3.3:11330415-11330434 | MS.gene039741:CDS | 45.0% |
| !! | ATGGTGGACTCTTCTCTTGT+TGG | + | chr3.3:11330608-11330627 | MS.gene039741:CDS | 45.0% |
| !! | GTGGTTTTACCTTTCACTCC+TGG | + | chr3.3:11330572-11330591 | MS.gene039741:CDS | 45.0% |
| !! | GTTAGCATTGGTGGAGAAGT+TGG | + | chr3.3:11330424-11330443 | MS.gene039741:CDS | 45.0% |
| !!! | CCTACCAGACCTGTTTTTTC+CGG | - | chr3.3:11328847-11328866 | None:intergenic | 45.0% |
| !!! | CTCACAACGCTCGTTTTTTC+CGG | - | chr3.3:11328799-11328818 | None:intergenic | 45.0% |
| AAGTTGGGCTTCTCTCTTGC+TGG | + | chr3.3:11328928-11328947 | MS.gene039741:intron | 50.0% | |
| AATTCGTGTGGTACGCGGTA+CGG | - | chr3.3:11329854-11329873 | None:intergenic | 50.0% | |
| ATCCCCTCGGTAGTCATGAA+GGG | - | chr3.3:11330290-11330309 | None:intergenic | 50.0% | |
| CCATCAACAAAAGAGAGGCG+AGG | - | chr3.3:11328305-11328324 | None:intergenic | 50.0% | |
| CCGGAAAAAACAGGTCTGGT+AGG | + | chr3.3:11328844-11328863 | MS.gene039741:intron | 50.0% | |
| GAGGTTGTTGAGATCATCGG+TGG | - | chr3.3:11328231-11328250 | None:intergenic | 50.0% | |
| GGCGAGGTTGTTGAGATCAT+CGG | - | chr3.3:11328234-11328253 | None:intergenic | 50.0% | |
| GGTCCTATAATTAGGGACGG+AGG | - | chr3.3:11329187-11329206 | None:intergenic | 50.0% | |
| GTCAAACCTCCAGGAGTGAA+AGG | - | chr3.3:11330584-11330603 | None:intergenic | 50.0% | |
| GTCGAGAAGCTGTTGTTGTG+TGG | - | chr3.3:11328192-11328211 | None:intergenic | 50.0% | |
| GTGCTAAGTATCATTGCGGC+TGG | + | chr3.3:11328155-11328174 | MS.gene039741:CDS | 50.0% | |
| GTTCCCTTCATGACTACCGA+GGG | + | chr3.3:11330284-11330303 | MS.gene039741:CDS | 50.0% | |
| TAGAAACAAGGTGAGAGGCG+AGG | - | chr3.3:11328250-11328269 | None:intergenic | 50.0% | |
| TCACCTACTTCTGCTTCAGC+AGG | - | chr3.3:11330485-11330504 | None:intergenic | 50.0% | |
| TTCCCTTCATGACTACCGAG+GGG | + | chr3.3:11330285-11330304 | MS.gene039741:CDS | 50.0% | |
| TTCGCAATTCGTGTGGTACG+CGG | - | chr3.3:11329859-11329878 | None:intergenic | 50.0% | |
| ! | CCTCGCCTCTCTTTTGTTGA+TGG | + | chr3.3:11328302-11328321 | MS.gene039741:CDS | 50.0% |
| !! | TACGCGAAAGTACCGCGAAT+CGG | - | chr3.3:11328723-11328742 | None:intergenic | 50.0% |
| !!! | CTCGTTTTTTCCGGTACCCA+TGG | - | chr3.3:11328790-11328809 | None:intergenic | 50.0% |
| !!! | TACCCATGGTTCGCTGGTTT+TGG | - | chr3.3:11328776-11328795 | None:intergenic | 50.0% |
| AAAACAGGTCTGGTAGGCGG+CGG | + | chr3.3:11328850-11328869 | MS.gene039741:intron | 55.0% | |
| AACCAGCGAACCATGGGTAC+CGG | + | chr3.3:11328777-11328796 | MS.gene039741:intron | 55.0% | |
| ACAGATGTTTGGCCATGCCG+AGG | - | chr3.3:11328082-11328101 | None:intergenic | 55.0% | |
| ATTCGTGTGGTACGCGGTAC+GGG | - | chr3.3:11329853-11329872 | None:intergenic | 55.0% | |
| ATTGACGGCGAACCGCGAAT+TGG | + | chr3.3:11328687-11328706 | MS.gene039741:intron | 55.0% | |
| CAGATGTTTGGCCATGCCGA+GGG | - | chr3.3:11328081-11328100 | None:intergenic | 55.0% | |
| CATCCCCTCGGTAGTCATGA+AGG | - | chr3.3:11330291-11330310 | None:intergenic | 55.0% | |
| CGCCAAAACCAGCGAACCAT+GGG | + | chr3.3:11328771-11328790 | MS.gene039741:intron | 55.0% | |
| CGTCCTGCTGAAGCAGAAGT+AGG | + | chr3.3:11330479-11330498 | MS.gene039741:CDS | 55.0% | |
| GGTTCCCTTCATGACTACCG+AGG | + | chr3.3:11330283-11330302 | MS.gene039741:CDS | 55.0% | |
| TCGCCAAAACCAGCGAACCA+TGG | + | chr3.3:11328770-11328789 | MS.gene039741:intron | 55.0% | |
| TTCGCGGTACTTTCGCGTAC+TGG | + | chr3.3:11328724-11328743 | MS.gene039741:intron | 55.0% | |
| ! | CATCGGTGGATTTGGAACGG+AGG | - | chr3.3:11328217-11328236 | None:intergenic | 55.0% |
| ! | CGAGCGTTGTGAGAGTGAGA+AGG | + | chr3.3:11328806-11328825 | MS.gene039741:intron | 55.0% |
| !! | ATCATTGCGGCTGGCTCTGA+GGG | + | chr3.3:11328164-11328183 | MS.gene039741:CDS | 55.0% |
| !! | TATCATTGCGGCTGGCTCTG+AGG | + | chr3.3:11328163-11328182 | MS.gene039741:CDS | 55.0% |
| CAGTGAAAGCGGCGTCTGAG+AGG | - | chr3.3:11328277-11328296 | None:intergenic | 60.0% | |
| GAAGCTGCTGCAGCTAGTGC+TGG | + | chr3.3:11330695-11330714 | MS.gene039741:CDS | 60.0% | |
| GGTTCGCGCGAACCAATTCG+CGG | - | chr3.3:11328702-11328721 | None:intergenic | 60.0% | |
| TGTGGTACGCGGTACGGGTT+CGG | - | chr3.3:11329848-11329867 | None:intergenic | 60.0% | |
| TTCCGGTACCCATGGTTCGC+TGG | - | chr3.3:11328782-11328801 | None:intergenic | 60.0% | |
| ! | CTCTCAGACGCCGCTTTCAC+TGG | + | chr3.3:11328275-11328294 | MS.gene039741:CDS | 60.0% |
| ! | TCAGACGCCGCTTTCACTGG+CGG | + | chr3.3:11328278-11328297 | MS.gene039741:CDS | 60.0% |
| GTGGTACGCGGTACGGGTTC+GGG | - | chr3.3:11329847-11329866 | None:intergenic | 65.0% | |
| ! | CAGACGCCGCTTTCACTGGC+GGG | + | chr3.3:11328279-11328298 | MS.gene039741:CDS | 65.0% |
| !! | GGTTCGCGCGAACCGATTCG+CGG | + | chr3.3:11328708-11328727 | MS.gene039741:intron | 65.0% |
| GCGAGGCCCGCCAGTGAAAG+CGG | - | chr3.3:11328288-11328307 | None:intergenic | 70.0% | |
| ! | GCGGTACGGGTTCGGGTTCG+CGG | - | chr3.3:11329840-11329859 | None:intergenic | 70.0% |
| GGTCTGGTAGGCGGCGGCTG+TGG | + | chr3.3:11328856-11328875 | MS.gene039741:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 11328014 | 11330850 | 11328014 | ID=MS.gene039741 |
| chr3.3 | mRNA | 11328014 | 11330850 | 11328014 | ID=MS.gene039741.t1;Parent=MS.gene039741 |
| chr3.3 | exon | 11328014 | 11328424 | 11328014 | ID=MS.gene039741.t1.exon1;Parent=MS.gene039741.t1 |
| chr3.3 | CDS | 11328014 | 11328424 | 11328014 | ID=cds.MS.gene039741.t1;Parent=MS.gene039741.t1 |
| chr3.3 | exon | 11330074 | 11330850 | 11330074 | ID=MS.gene039741.t1.exon2;Parent=MS.gene039741.t1 |
| chr3.3 | CDS | 11330074 | 11330850 | 11330074 | ID=cds.MS.gene039741.t1;Parent=MS.gene039741.t1 |
| Gene Sequence |
| Protein sequence |
