AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene03987

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03987.t1 MTR_3g463960 92.545 389 28 1 1 389 1 388 0.0 738
MS.gene03987.t1 MTR_3g463950 92.545 389 28 1 1 389 1 388 0.0 738
MS.gene03987.t1 MTR_3g463970 92.545 389 28 1 1 389 1 388 0.0 738
MS.gene03987.t1 MTR_3g463940 92.545 389 28 1 1 389 1 388 0.0 738
MS.gene03987.t1 MTR_3g463930 88.889 396 36 2 1 389 1 395 0.0 711
MS.gene03987.t1 MTR_3g448360 66.150 387 114 4 2 388 1 370 0.0 513
MS.gene03987.t1 MTR_3g438030 65.464 388 117 4 2 389 1 371 5.02e-179 502
MS.gene03987.t1 MTR_3g069780 65.464 388 117 4 2 389 1 371 8.86e-179 502
MS.gene03987.t1 MTR_3g069520 65.026 386 116 5 4 389 3 369 6.27e-177 497
MS.gene03987.t1 MTR_2g079090 63.990 386 110 6 4 389 3 359 1.48e-172 486
MS.gene03987.t1 MTR_0029s0050 64.491 383 107 6 7 389 6 359 1.01e-171 483
MS.gene03987.t1 MTR_2g079080 63.472 386 112 6 4 389 3 359 2.00e-170 480
MS.gene03987.t1 MTR_0029s0100 63.969 383 109 6 7 389 6 359 1.77e-169 478
MS.gene03987.t1 MTR_2g043980 56.701 388 131 8 4 389 9 361 4.73e-143 411
MS.gene03987.t1 MTR_2g015650 47.927 386 182 4 6 389 6 374 1.91e-120 354
MS.gene03987.t1 MTR_2g015670 46.610 354 163 6 41 389 28 360 6.48e-105 314
MS.gene03987.t1 MTR_2g015590 44.575 341 182 4 42 379 29 365 1.53e-99 300
MS.gene03987.t1 MTR_2g015580 46.552 348 170 7 42 382 45 383 2.66e-99 301
MS.gene03987.t1 MTR_2g015630 46.132 349 173 7 49 389 36 377 2.76e-99 300
MS.gene03987.t1 MTR_2g043990 51.299 308 107 7 4 309 71 337 3.24e-93 283
MS.gene03987.t1 MTR_2g015590 44.853 272 146 3 42 310 29 299 8.67e-74 233
MS.gene03987.t1 MTR_4g104240 36.888 347 200 9 39 379 34 367 8.82e-71 227
MS.gene03987.t1 MTR_3g466240 51.376 218 74 2 118 332 2 190 1.45e-68 215
MS.gene03987.t1 MTR_8g028160 35.196 358 195 13 42 379 34 374 1.30e-54 185
MS.gene03987.t1 MTR_7g116870 33.239 352 206 9 42 379 31 367 5.34e-54 183
MS.gene03987.t1 MTR_1g030220 34.750 400 210 14 4 381 8 378 7.27e-54 183
MS.gene03987.t1 MTR_7g087190 33.592 387 198 14 28 381 25 385 8.06e-54 183
MS.gene03987.t1 MTR_3g466190 55.689 167 52 4 72 238 7 151 1.57e-50 169
MS.gene03987.t1 MTR_3g466190 66.667 78 25 1 311 388 152 228 1.54e-27 108
MS.gene03987.t1 MTR_1g030230 34.262 359 195 12 44 381 32 370 2.27e-50 174
MS.gene03987.t1 MTR_1g030268 34.626 361 193 13 42 381 38 376 7.35e-50 172
MS.gene03987.t1 MTR_6g007090 34.670 349 202 10 42 379 37 370 2.76e-49 171
MS.gene03987.t1 MTR_1g030340 31.841 402 215 12 1 381 18 381 5.80e-49 170
MS.gene03987.t1 MTR_7g033165 32.718 379 207 14 31 386 22 375 2.97e-47 166
MS.gene03987.t1 MTR_7g111780 31.831 355 203 11 44 386 36 363 4.29e-47 164
MS.gene03987.t1 MTR_8g089805 32.976 373 198 11 37 381 33 381 2.05e-46 164
MS.gene03987.t1 MTR_7g033150 33.423 371 201 14 37 381 28 378 7.07e-46 162
MS.gene03987.t1 MTR_1g030275 34.066 364 191 15 42 381 37 375 3.94e-45 160
MS.gene03987.t1 MTR_7g113860 32.967 364 198 13 40 379 25 366 5.49e-45 159
MS.gene03987.t1 MTR_7g113860 31.649 376 211 14 29 379 18 372 5.94e-44 157
MS.gene03987.t1 MTR_6g007095 31.250 400 221 12 1 379 6 372 1.16e-43 161
MS.gene03987.t1 MTR_6g007095 28.297 364 213 8 37 381 356 690 2.15e-31 126
MS.gene03987.t1 MTR_1g082390 32.133 361 216 10 37 381 22 369 1.18e-43 155
MS.gene03987.t1 MTR_7g033155 31.620 389 209 14 31 381 23 392 2.55e-43 155
MS.gene03987.t1 MTR_8g038680 31.831 355 209 11 42 379 26 364 1.71e-38 142
MS.gene03987.t1 MTR_1g030268 34.247 292 163 9 42 320 38 313 6.60e-37 137
MS.gene03987.t1 MTR_1g030265 32.248 307 172 10 95 381 53 343 2.59e-36 135
MS.gene03987.t1 MTR_4g056280 29.101 378 215 13 9 372 6 344 2.01e-33 128
MS.gene03987.t1 MTR_6g007100 30.612 343 213 12 42 379 31 353 2.44e-33 128
MS.gene03987.t1 MTR_7g033165 32.550 298 163 9 31 314 22 295 1.79e-32 124
MS.gene03987.t1 MTR_8g031420 31.198 359 207 16 40 388 29 357 2.04e-32 125
MS.gene03987.t1 MTR_5g022630 29.006 362 212 14 20 367 24 354 2.06e-32 125
MS.gene03987.t1 MTR_2g033930 29.412 340 207 11 44 374 32 347 3.39e-32 125
MS.gene03987.t1 MTR_2g015080 29.971 347 206 15 33 364 29 353 5.69e-32 124
MS.gene03987.t1 MTR_4g056160 28.783 337 213 9 44 372 27 344 1.15e-31 123
MS.gene03987.t1 MTR_8g022810 28.947 380 230 14 1 368 1 352 1.34e-31 123
MS.gene03987.t1 MTR_1g025780 28.529 340 207 12 44 373 41 354 4.66e-31 121
MS.gene03987.t1 MTR_7g111780 29.818 275 157 9 119 381 9 259 1.09e-30 118
MS.gene03987.t1 MTR_8g031430 31.117 376 214 19 8 374 10 349 1.56e-30 120
MS.gene03987.t1 MTR_8g031400 31.884 345 199 13 40 374 31 349 2.58e-30 119
MS.gene03987.t1 MTR_8g014910 27.105 380 227 12 2 372 9 347 3.27e-30 119
MS.gene03987.t1 MTR_8g031390 30.056 356 207 15 40 384 31 355 5.03e-30 119
MS.gene03987.t1 MTR_3g052580 28.333 360 219 11 44 389 28 362 1.45e-29 118
MS.gene03987.t1 MTR_3g052580 28.333 360 219 11 44 389 27 361 2.13e-29 118
MS.gene03987.t1 MTR_5g022640 27.604 384 220 13 7 373 17 359 3.69e-29 116
MS.gene03987.t1 MTR_2g100620 27.988 343 206 14 44 372 31 346 8.22e-29 115
MS.gene03987.t1 MTR_3g052490 28.986 345 207 11 44 375 32 351 2.93e-28 114
MS.gene03987.t1 MTR_5g074270 30.110 362 210 16 20 369 16 346 3.84e-28 114
MS.gene03987.t1 MTR_8g012540 31.402 328 192 11 42 352 26 337 4.97e-28 113
MS.gene03987.t1 MTR_4g087985 29.641 334 202 13 44 364 36 349 6.59e-28 113
MS.gene03987.t1 MTR_2g033920 27.763 371 209 11 28 374 17 352 1.48e-27 112
MS.gene03987.t1 MTR_7g113860 29.126 309 179 11 93 379 8 298 4.14e-27 110
MS.gene03987.t1 MTR_5g084750 28.933 356 205 14 38 377 26 349 4.63e-27 110
MS.gene03987.t1 MTR_2g044100 26.479 355 221 14 37 377 36 364 7.66e-27 110
MS.gene03987.t1 MTR_1g025680 28.152 341 209 12 44 373 34 349 9.37e-27 111
MS.gene03987.t1 MTR_8g089805 29.677 310 169 10 100 381 25 313 9.70e-27 109
MS.gene03987.t1 MTR_3g005650 27.711 332 209 10 44 369 30 336 2.99e-26 108
MS.gene03987.t1 MTR_8g075230 27.219 338 216 9 44 373 36 351 3.56e-26 108
MS.gene03987.t1 MTR_3g052480 29.310 348 203 13 44 375 33 353 4.27e-26 108
MS.gene03987.t1 MTR_2g084585 28.406 345 201 14 44 372 30 344 6.85e-26 107
MS.gene03987.t1 MTR_8g079050 26.786 392 226 15 1 374 12 360 1.26e-25 107
MS.gene03987.t1 MTR_1g025700 26.901 342 211 13 44 373 50 364 1.64e-25 106
MS.gene03987.t1 MTR_1g025720 27.485 342 203 12 42 368 35 346 3.90e-25 105
MS.gene03987.t1 MTR_1g025760 28.152 341 209 11 44 373 80 395 5.40e-25 105
MS.gene03987.t1 MTR_5g009100 26.979 341 217 10 46 377 48 365 6.89e-25 105
MS.gene03987.t1 MTR_5g084770 27.941 340 210 12 44 372 28 343 8.41e-25 104
MS.gene03987.t1 MTR_3g082830 27.273 352 206 12 44 377 38 357 8.67e-25 104
MS.gene03987.t1 MTR_3g114120 29.706 340 195 15 44 368 47 357 8.91e-25 104
MS.gene03987.t1 MTR_8g031390 30.872 298 173 12 40 330 31 302 1.01e-24 103
MS.gene03987.t1 MTR_3g098270 26.944 360 217 12 42 385 32 361 1.92e-24 103
MS.gene03987.t1 MTR_4g035353 25.143 350 226 11 37 375 24 348 8.59e-24 101
MS.gene03987.t1 MTR_8g075220 27.586 348 229 9 33 373 29 360 8.60e-24 101
MS.gene03987.t1 MTR_8g087890 25.882 340 205 10 46 369 33 341 1.01e-23 101
MS.gene03987.t1 MTR_5g078210 27.083 336 201 14 48 369 29 334 1.07e-23 101
MS.gene03987.t1 MTR_3g114090 27.457 346 215 12 39 373 31 351 1.34e-23 100
MS.gene03987.t1 MTR_7g116520 27.451 357 209 15 36 374 26 350 1.53e-23 101
MS.gene03987.t1 MTR_1g025910 27.726 321 208 13 49 365 41 341 2.26e-23 100
MS.gene03987.t1 MTR_4g122200 26.781 351 220 11 35 374 28 352 2.98e-23 100
MS.gene03987.t1 MTR_5g084790 27.273 352 206 13 44 377 32 351 1.01e-22 98.6
MS.gene03987.t1 MTR_8g075200 27.378 347 226 11 33 373 30 356 1.09e-22 99.0
MS.gene03987.t1 MTR_5g093090 26.404 356 216 13 35 374 21 346 1.98e-22 97.8
MS.gene03987.t1 MTR_0565s0010 24.850 334 217 11 46 369 34 343 2.34e-22 97.8
MS.gene03987.t1 MTR_7g116510 28.161 348 205 13 43 374 24 342 3.78e-22 97.1
MS.gene03987.t1 MTR_3g464730 26.149 348 226 11 35 373 19 344 7.07e-22 95.9
MS.gene03987.t1 MTR_5g083040 26.765 340 217 11 44 371 32 351 1.90e-21 95.1
MS.gene03987.t1 MTR_7g116570 26.197 355 214 13 43 379 33 357 2.00e-21 95.1
MS.gene03987.t1 MTR_1g024890 27.324 355 212 16 36 374 24 348 2.07e-21 95.1
MS.gene03987.t1 MTR_3g435540 26.979 341 209 13 46 373 25 338 2.50e-21 94.7
MS.gene03987.t1 MTR_1g069175 27.536 345 212 13 43 374 32 351 3.06e-21 94.4
MS.gene03987.t1 MTR_0009s0250 26.087 345 215 14 44 380 33 345 4.79e-21 93.6
MS.gene03987.t1 MTR_4g108690 25.513 341 214 13 46 373 29 342 1.54e-20 92.4
MS.gene03987.t1 MTR_7g116500 27.778 342 213 14 43 374 32 349 2.33e-20 92.0
MS.gene03987.t1 MTR_7g104220 28.363 342 190 15 45 371 43 344 2.44e-20 91.7
MS.gene03987.t1 MTR_1g079540 27.298 359 223 15 33 379 22 354 1.23e-19 89.7
MS.gene03987.t1 MTR_1g092750 27.596 337 191 16 45 367 41 338 1.49e-19 89.4
MS.gene03987.t1 MTR_4g019880 27.326 344 214 14 43 374 31 350 1.90e-19 89.4
MS.gene03987.t1 MTR_3g005660 25.816 337 213 13 46 369 38 350 1.94e-19 89.4
MS.gene03987.t1 MTR_5g078210 28.159 277 170 9 48 313 29 287 2.53e-19 88.2
MS.gene03987.t1 MTR_2g033920 26.384 307 174 9 28 310 17 295 6.21e-19 87.0
MS.gene03987.t1 MTR_3g021460 24.090 357 224 10 28 374 16 335 2.12e-18 85.9
MS.gene03987.t1 MTR_1g060500 26.087 345 209 13 41 371 37 349 1.18e-17 84.0
MS.gene03987.t1 MTR_1g060490 25.074 339 204 14 41 367 34 334 1.44e-17 83.6
MS.gene03987.t1 MTR_2g017925 27.083 336 196 14 45 368 34 332 3.99e-17 82.4
MS.gene03987.t1 MTR_8g022790 24.561 342 218 11 42 374 35 345 4.17e-17 82.4
MS.gene03987.t1 MTR_8g022810 29.323 266 159 10 1 256 1 247 4.25e-17 82.0
MS.gene03987.t1 MTR_2g017955 24.860 358 213 14 45 385 34 352 6.20e-17 82.0
MS.gene03987.t1 MTR_3g024510 23.724 333 221 12 46 369 40 348 1.22e-16 80.9
MS.gene03987.t1 MTR_2g461580 23.229 353 225 9 35 377 22 338 1.55e-16 80.5
MS.gene03987.t1 MTR_6g021530 26.087 345 218 13 48 379 33 353 1.02e-15 78.2
MS.gene03987.t1 MTR_1g092760 25.373 335 212 11 45 371 40 344 2.24e-15 77.0
MS.gene03987.t1 MTR_2g017915 24.928 349 203 13 45 385 34 331 2.63e-15 77.0
MS.gene03987.t1 MTR_2g017875 24.731 372 226 16 30 385 20 353 1.32e-14 74.7
MS.gene03987.t1 MTR_7g008060 24.198 343 211 14 43 374 32 336 2.15e-14 74.3
MS.gene03987.t1 MTR_8g087870 26.331 357 204 15 45 385 30 343 2.34e-14 73.9
MS.gene03987.t1 MTR_1g092740 25.904 332 206 14 45 369 39 337 2.92e-14 73.9
MS.gene03987.t1 MTR_1108s0010 27.111 225 135 6 153 372 3 203 3.01e-14 71.6
MS.gene03987.t1 MTR_1g079530 24.269 342 219 13 43 374 28 339 6.39e-14 72.8
MS.gene03987.t1 MTR_1g092690 25.305 328 202 13 45 364 52 344 7.97e-14 72.4
MS.gene03987.t1 MTR_0127s0040 27.317 205 126 5 170 368 30 217 1.03e-13 70.5
MS.gene03987.t1 MTR_8g074560 25.070 355 221 16 44 379 31 359 1.62e-13 71.6
MS.gene03987.t1 MTR_5g074210 32.432 148 87 5 224 371 70 204 7.79e-12 64.7
MS.gene03987.t1 MTR_4g056220 33.945 109 65 2 264 372 80 181 2.18e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03987.t1 AT5G45910 47.354 359 179 6 29 380 15 370 9.78e-109 324
MS.gene03987.t1 AT1G28610 46.064 343 175 6 43 381 30 366 2.72e-101 305
MS.gene03987.t1 AT1G28600 43.978 357 187 8 29 379 15 364 1.19e-97 296
MS.gene03987.t1 AT1G28570 44.606 343 179 7 42 379 32 368 4.02e-95 290
MS.gene03987.t1 AT1G28590 43.931 346 183 7 42 382 34 373 1.53e-94 289
MS.gene03987.t1 AT1G28580 43.732 343 182 7 42 379 35 371 2.56e-93 285
MS.gene03987.t1 AT1G31550 43.149 343 183 6 42 379 34 369 6.50e-92 281
MS.gene03987.t1 AT2G27360 42.442 344 186 8 42 379 31 368 1.58e-91 281
MS.gene03987.t1 AT1G28640 42.319 345 188 7 42 381 33 371 1.66e-91 280
MS.gene03987.t1 AT1G28670 42.775 346 186 8 42 381 33 372 4.35e-91 279
MS.gene03987.t1 AT1G28660 42.899 345 186 7 42 381 33 371 7.74e-91 278
MS.gene03987.t1 AT1G28660 43.188 345 184 8 42 381 33 370 5.20e-90 276
MS.gene03987.t1 AT1G31550 42.566 343 182 7 42 379 34 366 2.72e-88 272
MS.gene03987.t1 AT1G28650 41.449 345 191 7 42 381 35 373 7.28e-88 271
MS.gene03987.t1 AT1G28580 40.753 292 165 5 90 379 5 290 1.55e-71 226
MS.gene03987.t1 AT3G48460 38.068 352 187 11 41 379 35 368 6.12e-71 227
MS.gene03987.t1 AT5G03980 34.783 345 175 7 29 371 14 310 2.76e-58 192
MS.gene03987.t1 AT1G28570 42.453 212 117 3 170 379 88 296 5.57e-54 181
MS.gene03987.t1 AT1G28570 58.929 56 20 2 42 94 32 87 1.31e-12 68.6
MS.gene03987.t1 AT1G28570 42.995 207 113 3 175 379 2 205 1.82e-53 177
MS.gene03987.t1 AT4G01130 33.333 357 203 10 42 379 32 372 6.11e-53 181
MS.gene03987.t1 AT1G54790 31.649 376 213 12 35 386 23 378 3.35e-50 173
MS.gene03987.t1 AT1G56670 31.714 391 227 13 1 379 1 363 5.65e-50 172
MS.gene03987.t1 AT1G54790 29.765 383 223 13 30 386 15 377 6.15e-44 157
MS.gene03987.t1 AT1G67830 30.899 356 218 9 35 374 21 364 2.09e-43 155
MS.gene03987.t1 AT1G09390 30.836 347 206 9 44 379 37 360 1.42e-42 153
MS.gene03987.t1 AT1G28600 44.693 179 91 5 42 216 29 203 2.17e-42 148
MS.gene03987.t1 AT5G14450 30.141 355 216 9 42 379 39 378 3.01e-42 152
MS.gene03987.t1 AT3G05180 31.025 361 215 12 35 377 27 371 2.30e-41 150
MS.gene03987.t1 AT3G26430 32.447 376 210 14 30 381 17 372 2.55e-41 150
MS.gene03987.t1 AT3G62280 29.651 344 210 10 45 379 37 357 3.66e-41 149
MS.gene03987.t1 AT1G28610 44.000 175 92 4 43 214 30 201 4.20e-40 143
MS.gene03987.t1 AT1G54790 28.395 405 226 13 30 386 15 403 1.61e-39 145
MS.gene03987.t1 AT4G01130 33.333 279 164 7 42 310 32 298 1.41e-36 136
MS.gene03987.t1 AT3G27950 29.412 374 211 10 34 383 22 366 2.27e-35 134
MS.gene03987.t1 AT1G20120 31.412 347 203 11 42 376 76 399 5.77e-33 127
MS.gene03987.t1 AT1G71120 28.739 341 204 10 44 374 31 342 1.29e-32 126
MS.gene03987.t1 AT1G56670 30.530 321 188 11 1 310 1 297 1.31e-32 124
MS.gene03987.t1 AT1G23500 28.613 346 211 12 34 374 25 339 9.05e-32 123
MS.gene03987.t1 AT1G53920 28.852 357 218 13 44 389 48 379 9.03e-31 121
MS.gene03987.t1 AT1G73610 29.191 346 205 14 34 373 26 337 1.11e-30 120
MS.gene03987.t1 AT4G01130 28.188 298 184 8 100 379 1 286 2.26e-30 118
MS.gene03987.t1 AT1G75880 28.108 370 238 10 10 373 21 368 2.33e-30 120
MS.gene03987.t1 AT1G75880 28.108 370 237 10 10 373 21 367 5.34e-30 119
MS.gene03987.t1 AT1G20132 28.235 340 210 12 44 373 61 376 1.15e-29 118
MS.gene03987.t1 AT5G45950 28.657 335 201 12 44 369 40 345 4.22e-29 116
MS.gene03987.t1 AT1G75890 27.893 337 216 10 44 373 47 363 5.02e-29 116
MS.gene03987.t1 AT2G40250 28.242 347 205 12 39 368 31 350 6.26e-29 115
MS.gene03987.t1 AT5G40990 32.184 348 194 16 44 375 37 358 9.28e-29 115
MS.gene03987.t1 AT1G75890 27.429 350 214 11 44 373 47 376 9.52e-29 115
MS.gene03987.t1 AT5G41890 29.722 360 213 14 46 388 33 369 9.81e-29 115
MS.gene03987.t1 AT1G75890 27.893 337 216 10 44 373 76 392 1.08e-28 115
MS.gene03987.t1 AT4G10950 28.000 350 211 12 39 374 65 387 3.79e-28 114
MS.gene03987.t1 AT1G06990 27.461 386 240 14 1 376 1 356 4.26e-28 113
MS.gene03987.t1 AT5G15720 26.347 334 216 11 44 368 30 342 1.41e-27 112
MS.gene03987.t1 AT1G75900 26.822 343 208 9 44 372 43 356 1.61e-27 112
MS.gene03987.t1 AT3G16370 27.195 353 222 13 35 377 23 350 9.99e-27 109
MS.gene03987.t1 AT5G63170 28.319 339 195 13 36 364 22 322 1.07e-26 109
MS.gene03987.t1 AT1G75920 28.652 356 200 12 31 373 22 336 1.38e-26 109
MS.gene03987.t1 AT5G45960 28.107 338 213 12 44 371 47 364 6.68e-26 107
MS.gene03987.t1 AT2G42990 27.628 333 211 11 44 368 28 338 8.84e-26 107
MS.gene03987.t1 AT1G71250 25.740 338 225 8 44 375 41 358 1.04e-25 107
MS.gene03987.t1 AT1G53940 30.347 346 203 16 44 375 39 360 1.16e-25 107
MS.gene03987.t1 AT4G10950 27.714 350 208 13 39 374 65 383 1.80e-25 107
MS.gene03987.t1 AT1G20130 27.566 341 218 11 44 373 204 526 1.88e-25 108
MS.gene03987.t1 AT3G14225 28.169 355 218 14 44 384 37 368 2.67e-25 106
MS.gene03987.t1 AT3G14225 28.045 353 217 14 44 384 37 364 2.74e-25 106
MS.gene03987.t1 AT1G20130 27.566 341 218 11 44 373 184 506 2.80e-25 107
MS.gene03987.t1 AT5G08460 27.143 350 217 11 33 368 38 363 4.92e-25 105
MS.gene03987.t1 AT2G04570 26.420 352 223 12 35 376 21 346 6.65e-25 104
MS.gene03987.t1 AT3G04290 27.941 340 215 11 43 374 28 345 6.88e-25 104
MS.gene03987.t1 AT1G75910 26.836 354 216 13 30 373 16 336 8.32e-25 104
MS.gene03987.t1 AT2G23540 29.379 354 197 14 44 374 48 371 1.24e-24 104
MS.gene03987.t1 AT3G62280 27.737 274 171 8 45 310 37 291 1.98e-24 102
MS.gene03987.t1 AT1G20135 26.113 337 211 9 37 367 22 326 3.53e-24 102
MS.gene03987.t1 AT1G71691 27.326 344 206 10 44 374 55 367 5.42e-24 102
MS.gene03987.t1 AT4G26790 26.023 342 219 13 42 373 27 344 6.19e-24 102
MS.gene03987.t1 AT4G26790 26.023 342 219 13 42 373 27 344 6.19e-24 102
MS.gene03987.t1 AT3G14820 27.139 339 209 12 44 372 32 342 1.05e-23 101
MS.gene03987.t1 AT5G42170 26.807 332 220 10 44 372 50 361 1.41e-23 101
MS.gene03987.t1 AT1G74460 27.273 341 208 12 46 373 25 338 1.68e-23 100
MS.gene03987.t1 AT5G18430 27.378 347 210 13 43 374 27 346 2.79e-23 100
MS.gene03987.t1 AT1G75920 27.763 371 199 13 31 373 17 346 4.21e-23 99.8
MS.gene03987.t1 AT1G29670 27.353 340 199 12 46 369 34 341 4.33e-23 99.8
MS.gene03987.t1 AT1G53990 26.515 396 234 16 1 384 5 355 8.90e-23 99.0
MS.gene03987.t1 AT1G29670 27.353 340 199 12 46 369 102 409 1.00e-22 99.8
MS.gene03987.t1 AT1G75930 25.549 364 211 15 28 372 13 335 1.55e-22 97.8
MS.gene03987.t1 AT1G59406 26.979 341 210 10 44 373 30 342 2.25e-22 97.4
MS.gene03987.t1 AT1G59030 26.979 341 210 10 44 373 30 342 2.25e-22 97.4
MS.gene03987.t1 AT1G58725 26.979 341 210 10 44 373 30 342 2.25e-22 97.4
MS.gene03987.t1 AT5G22810 25.806 341 218 9 44 372 34 351 3.03e-22 97.4
MS.gene03987.t1 AT5G03820 26.023 342 215 13 44 372 33 349 4.20e-22 96.7
MS.gene03987.t1 AT3G53100 26.822 343 209 13 44 372 29 343 4.83e-22 96.7
MS.gene03987.t1 AT5G03820 26.023 342 215 13 44 372 61 377 7.94e-22 96.3
MS.gene03987.t1 AT1G75920 28.261 322 182 12 66 373 22 308 9.39e-22 95.1
MS.gene03987.t1 AT5G03810 26.608 342 212 13 44 372 30 345 1.04e-21 95.5
MS.gene03987.t1 AT3G50400 27.548 363 221 13 30 374 20 358 1.59e-21 95.5
MS.gene03987.t1 AT3G09930 25.982 331 208 12 45 367 40 341 3.25e-21 94.4
MS.gene03987.t1 AT3G09930 25.982 331 208 12 45 367 40 341 3.25e-21 94.4
MS.gene03987.t1 AT2G19060 27.089 347 203 14 46 379 32 341 5.41e-21 93.6
MS.gene03987.t1 AT5G33370 26.608 342 217 12 43 374 29 346 8.01e-21 93.2
MS.gene03987.t1 AT2G31540 28.134 359 201 18 42 376 33 358 9.74e-21 92.8
MS.gene03987.t1 AT2G03980 26.488 336 213 11 42 368 41 351 1.24e-20 92.8
MS.gene03987.t1 AT2G03980 26.488 336 213 11 42 368 41 351 1.24e-20 92.8
MS.gene03987.t1 AT2G03980 26.488 336 213 11 42 368 41 351 1.24e-20 92.8
MS.gene03987.t1 AT2G03980 26.488 336 213 11 42 368 41 351 1.24e-20 92.8
MS.gene03987.t1 AT2G24560 27.762 353 208 18 37 371 26 349 1.39e-20 92.4
MS.gene03987.t1 AT1G58520 26.471 340 206 9 44 373 30 335 1.60e-20 92.0
MS.gene03987.t1 AT1G58525 26.471 340 206 9 44 373 30 335 1.60e-20 92.0
MS.gene03987.t1 AT2G19010 27.457 346 201 14 46 379 62 369 2.74e-20 92.0
MS.gene03987.t1 AT5G15720 25.362 276 184 8 44 310 30 292 2.85e-20 90.9
MS.gene03987.t1 AT2G19010 27.457 346 201 14 46 379 32 339 2.86e-20 91.3
MS.gene03987.t1 AT1G58430 26.496 351 204 16 42 371 33 350 1.09e-19 90.1
MS.gene03987.t1 AT4G28780 26.934 349 219 14 43 379 30 354 2.50e-19 89.0
MS.gene03987.t1 AT1G33811 25.588 340 214 15 45 369 35 350 2.86e-19 89.0
MS.gene03987.t1 AT1G29660 26.347 334 211 13 46 369 34 342 3.27e-19 88.6
MS.gene03987.t1 AT5G55050 27.515 338 208 12 44 367 39 353 6.37e-19 87.8
MS.gene03987.t1 AT2G19050 26.590 346 204 14 46 377 33 342 8.58e-19 87.0
MS.gene03987.t1 AT5G03610 24.603 378 244 14 3 373 7 350 1.77e-18 86.3
MS.gene03987.t1 AT1G53940 30.182 275 168 11 44 310 39 297 2.17e-18 85.5
MS.gene03987.t1 AT1G71691 27.240 279 169 7 44 310 55 311 1.22e-17 83.2
MS.gene03987.t1 AT5G45670 24.412 340 211 11 46 369 31 340 1.41e-17 84.0
MS.gene03987.t1 AT1G75920 25.356 351 187 11 31 373 22 305 4.25e-17 81.6
MS.gene03987.t1 AT4G18970 24.189 339 213 10 46 369 30 339 5.78e-17 82.0
MS.gene03987.t1 AT4G18970 24.260 338 212 10 46 368 30 338 7.20e-17 82.0
MS.gene03987.t1 AT5G15720 23.875 289 181 10 94 368 48 311 1.30e-16 80.5
MS.gene03987.t1 AT5G37690 23.373 338 215 12 48 371 31 338 2.83e-16 79.7
MS.gene03987.t1 AT1G54020 25.323 387 228 19 7 385 8 341 2.99e-16 80.1
MS.gene03987.t1 AT1G54010 26.074 349 201 15 39 371 31 338 1.45e-15 78.2
MS.gene03987.t1 AT5G03600 22.973 370 237 10 4 367 15 342 1.76e-14 74.7
MS.gene03987.t1 AT2G36325 23.708 329 215 11 45 367 48 346 3.22e-14 73.6
MS.gene03987.t1 AT3G14210 26.519 362 208 18 40 385 32 351 8.66e-14 72.8
MS.gene03987.t1 AT2G24560 27.740 292 172 15 37 310 26 296 1.03e-13 72.0
MS.gene03987.t1 AT5G03600 23.708 329 209 9 45 367 15 307 1.64e-13 71.2
MS.gene03987.t1 AT1G54000 24.490 343 210 14 41 371 33 338 1.65e-13 72.0
MS.gene03987.t1 AT1G71691 24.916 297 179 10 91 374 1 266 2.09e-13 70.5
MS.gene03987.t1 AT1G54030 22.462 325 209 10 43 363 51 336 1.02e-12 69.7
MS.gene03987.t1 AT3G14220 24.036 337 205 13 45 368 33 331 1.93e-12 68.6
MS.gene03987.t1 AT2G19050 26.336 262 159 9 46 297 33 270 7.24e-12 65.9
MS.gene03987.t1 AT5G37690 22.189 338 211 13 48 371 31 330 1.89e-11 65.5
MS.gene03987.t1 AT2G04020 26.887 212 143 6 42 249 41 244 3.01e-11 63.9

Find 64 sgRNAs with CRISPR-Local

Find 105 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCCTTCAAAATATATAAAT+TGG 0.130836 3.2:+54600052 MS.gene03987:CDS
CCCCTTTCTTCGTGTCTTCT+TGG 0.142457 3.2:-54599018 None:intergenic
TACGAAGCCATCTTCAATTT+TGG 0.178136 3.2:+54598609 MS.gene03987:CDS
GCTGAATGCAGCAGCATTTC+CGG 0.257779 3.2:-54598649 None:intergenic
TTTATGTCTTAATGTCTCTA+TGG 0.322722 3.2:-54599739 None:intergenic
CACCCAATTGGAAAGTTTCC+AGG 0.330852 3.2:-54599600 None:intergenic
AAGTTGTTCATTGTAGTATT+CGG 0.350636 3.2:-54599709 None:intergenic
ATGCCTGACAATAGTCCTTA+TGG 0.355804 3.2:+54598681 MS.gene03987:CDS
TATCAAACACCACAACAATA+TGG 0.370274 3.2:+54599816 MS.gene03987:CDS
CGAAAGCATTGTAAGCTATC+AGG 0.379885 3.2:-54599686 None:intergenic
ATTCCTGGAAACTTTCCAAT+TGG 0.402546 3.2:+54599597 MS.gene03987:CDS
TTGTTTATAGTGGGAGAGAT+TGG 0.429569 3.2:+54599308 MS.gene03987:CDS
AATGTTGTTTCAATTTCAAA+TGG 0.430898 3.2:+54598540 MS.gene03987:CDS
GCCAAGAAGACACGAAGAAA+GGG 0.431517 3.2:+54599017 MS.gene03987:CDS
GCAATGGAGCTAGTGATTCC+TGG 0.440053 3.2:+54599582 MS.gene03987:CDS
CTTCAGTCATTAATCAAAGA+AGG 0.446875 3.2:+54599558 MS.gene03987:intron
AAGAAAAGTTGTTCCACCAT+TGG 0.452343 3.2:+54599379 MS.gene03987:CDS
CCCTTCAAAATATATAAATT+GGG 0.454082 3.2:+54600053 MS.gene03987:CDS
TTAAGGGAAGGATTTGCAAA+AGG 0.454628 3.2:-54600135 None:intergenic
TTCCTGGAAACTTTCCAATT+GGG 0.455772 3.2:+54599598 MS.gene03987:CDS
ACACCAGCATTACACCCAAT+TGG 0.462222 3.2:-54599612 None:intergenic
AATATATTATCTTAGCTTGA+GGG 0.464764 3.2:-54599764 None:intergenic
AGAATCACCAAAATTGAAGA+TGG 0.466360 3.2:-54598616 None:intergenic
CCATCTGGACGTTTATCAAA+TGG 0.466797 3.2:+54598723 MS.gene03987:CDS
AAGGAAGACTATGATGAACT+TGG 0.478477 3.2:+54599660 MS.gene03987:CDS
GGCTTCGTAAGGTAAAGAAT+TGG 0.479011 3.2:-54598595 None:intergenic
TAAGGGAAGGATTTGCAAAA+GGG 0.481951 3.2:-54600134 None:intergenic
ACTTACTTCAAACATCCATC+TGG 0.482860 3.2:+54598708 MS.gene03987:CDS
TTATAGTGGGAGAGATTGGT+GGG 0.487433 3.2:+54599312 MS.gene03987:CDS
TTGAAGTAAGTTGAGCCATA+AGG 0.494864 3.2:-54598696 None:intergenic
TTTCCAATTGGGTGTAATGC+TGG 0.500453 3.2:+54599609 MS.gene03987:CDS
AAATGTGATTAGTAAGAAGA+AGG 0.505122 3.2:+54599641 MS.gene03987:CDS
AAAGCATGTTGTGGAGGAAG+TGG 0.510426 3.2:+54599970 MS.gene03987:CDS
TGGTGGCATCATTCCACGAC+GGG 0.510932 3.2:-54599089 None:intergenic
TTTATAGTGGGAGAGATTGG+TGG 0.512093 3.2:+54599311 MS.gene03987:CDS
AGCCAAGAAGACACGAAGAA+AGG 0.513729 3.2:+54599016 MS.gene03987:CDS
TTCTAAGATATATTGAAAAG+AGG 0.518550 3.2:-54600162 None:intergenic
ATCTTATAAGTTAATAGCAA+AGG 0.520142 3.2:+54600098 MS.gene03987:CDS
AATGAATGATCTGTGGTGTT+TGG 0.520693 3.2:-54599109 None:intergenic
TCTTATAAGTTAATAGCAAA+GGG 0.521089 3.2:+54600099 MS.gene03987:CDS
TTGTTGACATTCATATATGC+CGG 0.525369 3.2:-54598992 None:intergenic
GAGCCATAAGGACTATTGTC+AGG 0.532224 3.2:-54598684 None:intergenic
ACTATTTATTTCGCCCGTCG+TGG 0.534707 3.2:+54599076 MS.gene03987:CDS
TTAATTGTAGCTGAGGCATA+CGG 0.536180 3.2:+54598956 MS.gene03987:intron
ACTTTAAGATCAACATGGTA+TGG 0.540683 3.2:-54599994 None:intergenic
AAATATATTATCTTAGCTTG+AGG 0.542778 3.2:-54599765 None:intergenic
ATAGCAAAGGGACTAGTTGA+AGG 0.549807 3.2:+54600111 MS.gene03987:CDS
AAAACCACATGTGAAGGTGA+TGG 0.559909 3.2:-54598511 None:intergenic
TCAAAATATATAAATTGGGA+TGG 0.562252 3.2:+54600057 MS.gene03987:CDS
ATTAATCAAAGAAGGAGCAA+TGG 0.563591 3.2:+54599566 MS.gene03987:CDS
GAATGATCTGTGGTGTTTGG+TGG 0.570728 3.2:-54599106 None:intergenic
AGTGTAATAGATTCAACCAA+TGG 0.580015 3.2:-54599395 None:intergenic
CATTGCGTGTGCAACTTGAG+TGG 0.582672 3.2:+54599128 MS.gene03987:CDS
CCATTTGATAAACGTCCAGA+TGG 0.587631 3.2:-54598723 None:intergenic
GGTGATTCTATAAGTGACAC+CGG 0.593539 3.2:+54598630 MS.gene03987:CDS
CTCCACACACCATATTGTTG+TGG 0.599527 3.2:-54599825 None:intergenic
AAATTGAAGATGGCTTCGTA+AGG 0.607757 3.2:-54598606 None:intergenic
AGGAAGACTATGATGAACTT+GGG 0.616167 3.2:+54599661 MS.gene03987:CDS
GTAATAGATTCAACCAATGG+TGG 0.620270 3.2:-54599392 None:intergenic
CCAAGAAGACACGAAGAAAG+GGG 0.652855 3.2:+54599018 MS.gene03987:CDS
ATTGATATAACATACGATGG+TGG 0.657430 3.2:-54599420 None:intergenic
TTGGTGGCATCATTCCACGA+CGG 0.688686 3.2:-54599090 None:intergenic
CACACGCAATGAATGATCTG+TGG 0.710194 3.2:-54599116 None:intergenic
AAAATACTTTAAGATCAACA+TGG 0.728528 3.2:-54599999 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTGACAAAAATAAATTA+TGG - chr3.2:54599879-54599898 None:intergenic 10.0%
!! ATATGAAAGTAAAAAAAAAA+TGG + chr3.2:54598815-54598834 MS.gene03987:intron 10.0%
!! AAAAAATCATTGTTTATAGT+GGG + chr3.2:54599299-54599318 MS.gene03987:CDS 15.0%
!! TTAAAACAAACAAAATATGT+AGG - chr3.2:54599209-54599228 None:intergenic 15.0%
!! AAAATTGATATAACATACGA+TGG - chr3.2:54599426-54599445 None:intergenic 20.0%
!! ACCCTTCAAAATATATAAAT+TGG + chr3.2:54600052-54600071 MS.gene03987:CDS 20.0%
!! ATCTTATAAGTTAATAGCAA+AGG + chr3.2:54600098-54600117 MS.gene03987:CDS 20.0%
!! ATTCTTGGATAAATGTAATA+GGG + chr3.2:54599513-54599532 MS.gene03987:intron 20.0%
!! CAAAAAATCATTGTTTATAG+TGG + chr3.2:54599298-54599317 MS.gene03987:CDS 20.0%
!! CCCTTCAAAATATATAAATT+GGG + chr3.2:54600053-54600072 MS.gene03987:CDS 20.0%
!! GACTAAATGAATATTATTCT+TGG + chr3.2:54599498-54599517 MS.gene03987:intron 20.0%
!! TATTCTTGGATAAATGTAAT+AGG + chr3.2:54599512-54599531 MS.gene03987:intron 20.0%
!! TCAAAATATATAAATTGGGA+TGG + chr3.2:54600057-54600076 MS.gene03987:CDS 20.0%
!! TCTTATAAGTTAATAGCAAA+GGG + chr3.2:54600099-54600118 MS.gene03987:CDS 20.0%
!! TTTATGTAAATTAATGATGC+AGG + chr3.2:54599919-54599938 MS.gene03987:intron 20.0%
!!! AAAATACTTTAAGATCAACA+TGG - chr3.2:54600002-54600021 None:intergenic 20.0%
!!! AAATATATTATCTTAGCTTG+AGG - chr3.2:54599768-54599787 None:intergenic 20.0%
!!! AATATATTATCTTAGCTTGA+GGG - chr3.2:54599767-54599786 None:intergenic 20.0%
!!! AATGTTGTTTCAATTTCAAA+TGG + chr3.2:54598540-54598559 MS.gene03987:CDS 20.0%
!!! ATTTATATATTTTGAAGGGT+CGG - chr3.2:54600052-54600071 None:intergenic 20.0%
!!! CCCAATTTATATATTTTGAA+GGG - chr3.2:54600056-54600075 None:intergenic 20.0%
!!! TCCCAATTTATATATTTTGA+AGG - chr3.2:54600057-54600076 None:intergenic 20.0%
!!! TTAATTGAGCTTAGTTTTTA+TGG - chr3.2:54599472-54599491 None:intergenic 20.0%
! AAATGTGATTAGTAAGAAGA+AGG + chr3.2:54599641-54599660 MS.gene03987:CDS 25.0%
! AAGTTGTTCATTGTAGTATT+CGG - chr3.2:54599712-54599731 None:intergenic 25.0%
! TTCATGTGTAAAAGCAAAAA+AGG + chr3.2:54599169-54599188 MS.gene03987:CDS 25.0%
! TTTATGTCTTAATGTCTCTA+TGG - chr3.2:54599742-54599761 None:intergenic 25.0%
!! CGACTGATTATAGATTTTAT+AGG + chr3.2:54598747-54598766 MS.gene03987:CDS 25.0%
!! TATTGAAAAGAGGAGTTTTA+AGG - chr3.2:54600155-54600174 None:intergenic 25.0%
!!! AAAAGTTGTGTTATTTCATG+AGG - chr3.2:54599245-54599264 None:intergenic 25.0%
!!! ATTGAAAAGAGGAGTTTTAA+GGG - chr3.2:54600154-54600173 None:intergenic 25.0%
!!! GTTGATCTTAAAGTATTTTG+TGG + chr3.2:54600003-54600022 MS.gene03987:CDS 25.0%
!!! TCTTAAAGTATTTTGTGGAA+CGG + chr3.2:54600008-54600027 MS.gene03987:CDS 25.0%
!!! TTTATATATTTTGAAGGGTC+GGG - chr3.2:54600051-54600070 None:intergenic 25.0%
!!! TTTTTGCTTTTACACATGAA+TGG - chr3.2:54599169-54599188 None:intergenic 25.0%
AAAATGGCAATGCTAGAAAA+TGG + chr3.2:54598831-54598850 MS.gene03987:intron 30.0%
AGAATCACCAAAATTGAAGA+TGG - chr3.2:54598619-54598638 None:intergenic 30.0%
AGTGTAATAGATTCAACCAA+TGG - chr3.2:54599398-54599417 None:intergenic 30.0%
ATTAATCAAAGAAGGAGCAA+TGG + chr3.2:54599566-54599585 MS.gene03987:CDS 30.0%
ATTGATATAACATACGATGG+TGG - chr3.2:54599423-54599442 None:intergenic 30.0%
CTTCAGTCATTAATCAAAGA+AGG + chr3.2:54599558-54599577 MS.gene03987:intron 30.0%
TATCAAACACCACAACAATA+TGG + chr3.2:54599816-54599835 MS.gene03987:CDS 30.0%
TTGTTGACATTCATATATGC+CGG - chr3.2:54598995-54599014 None:intergenic 30.0%
! ATGGCAATGAGATTTTTGTT+CGG + chr3.2:54598559-54598578 MS.gene03987:CDS 30.0%
!! ACACAACTTTTGTTATGATG+TGG + chr3.2:54599254-54599273 MS.gene03987:intron 30.0%
!! ACTTTAAGATCAACATGGTA+TGG - chr3.2:54599997-54600016 None:intergenic 30.0%
!! CACAACTTTTGTTATGATGT+GGG + chr3.2:54599255-54599274 MS.gene03987:intron 30.0%
!! CTTAAAGTATTTTGTGGAAC+GGG + chr3.2:54600009-54600028 MS.gene03987:CDS 30.0%
!! TTATATATTTTGAAGGGTCG+GGG - chr3.2:54600050-54600069 None:intergenic 30.0%
!!! ACTCATTTTAATTGTAGCTG+AGG + chr3.2:54598949-54598968 MS.gene03987:intron 30.0%
!!! TGCAGGTTTTATTTCTGATA+AGG + chr3.2:54599936-54599955 MS.gene03987:intron 30.0%
AAATTGAAGATGGCTTCGTA+AGG - chr3.2:54598609-54598628 None:intergenic 35.0%
AAGAAAAGTTGTTCCACCAT+TGG + chr3.2:54599379-54599398 MS.gene03987:CDS 35.0%
AAGGAAGACTATGATGAACT+TGG + chr3.2:54599660-54599679 MS.gene03987:CDS 35.0%
AATGAATGATCTGTGGTGTT+TGG - chr3.2:54599112-54599131 None:intergenic 35.0%
ACTTACTTCAAACATCCATC+TGG + chr3.2:54598708-54598727 MS.gene03987:CDS 35.0%
AGGAAGACTATGATGAACTT+GGG + chr3.2:54599661-54599680 MS.gene03987:CDS 35.0%
ATTCCTGGAAACTTTCCAAT+TGG + chr3.2:54599597-54599616 MS.gene03987:CDS 35.0%
GTAATAGATTCAACCAATGG+TGG - chr3.2:54599395-54599414 None:intergenic 35.0%
TAAGGGAAGGATTTGCAAAA+GGG - chr3.2:54600137-54600156 None:intergenic 35.0%
TCCAAAAAAACCACATGTGA+AGG - chr3.2:54598520-54598539 None:intergenic 35.0%
TTAAGGGAAGGATTTGCAAA+AGG - chr3.2:54600138-54600157 None:intergenic 35.0%
TTAATTGTAGCTGAGGCATA+CGG + chr3.2:54598956-54598975 MS.gene03987:intron 35.0%
TTCATATATGCCGGCAAAAA+TGG - chr3.2:54598986-54599005 None:intergenic 35.0%
TTCCTGGAAACTTTCCAATT+GGG + chr3.2:54599598-54599617 MS.gene03987:CDS 35.0%
! TACGAAGCCATCTTCAATTT+TGG + chr3.2:54598609-54598628 MS.gene03987:CDS 35.0%
! TGGCAATGAGATTTTTGTTC+GGG + chr3.2:54598560-54598579 MS.gene03987:CDS 35.0%
! TTGAAGTAAGTTGAGCCATA+AGG - chr3.2:54598699-54598718 None:intergenic 35.0%
! TTGTTTATAGTGGGAGAGAT+TGG + chr3.2:54599308-54599327 MS.gene03987:CDS 35.0%
!! ATACGGATTACCATTTTTGC+CGG + chr3.2:54598973-54598992 MS.gene03987:CDS 35.0%
!! ATTTTGAAAGCATGTTGTGG+AGG + chr3.2:54599964-54599983 MS.gene03987:CDS 35.0%
!! GAGATTTTGAAAGCATGTTG+TGG + chr3.2:54599961-54599980 MS.gene03987:CDS 35.0%
!!! AAAAGAGGAGTTTTAAGGGA+AGG - chr3.2:54600150-54600169 None:intergenic 35.0%
!!! ACCTTCACATGTGGTTTTTT+TGG + chr3.2:54598516-54598535 MS.gene03987:CDS 35.0%
AAAACCACATGTGAAGGTGA+TGG - chr3.2:54598514-54598533 None:intergenic 40.0%
ATGCCTGACAATAGTCCTTA+TGG + chr3.2:54598681-54598700 MS.gene03987:CDS 40.0%
CCATCTGGACGTTTATCAAA+TGG + chr3.2:54598723-54598742 MS.gene03987:CDS 40.0%
CCATTTGATAAACGTCCAGA+TGG - chr3.2:54598726-54598745 None:intergenic 40.0%
GGCTTCGTAAGGTAAAGAAT+TGG - chr3.2:54598598-54598617 None:intergenic 40.0%
GGTGATTCTATAAGTGACAC+CGG + chr3.2:54598630-54598649 MS.gene03987:CDS 40.0%
TTTCCAATTGGGTGTAATGC+TGG + chr3.2:54599609-54599628 MS.gene03987:CDS 40.0%
! GGGGTAAATTTTGCATTTGC+AGG + chr3.2:54599037-54599056 MS.gene03987:CDS 40.0%
! TTATAGTGGGAGAGATTGGT+GGG + chr3.2:54599312-54599331 MS.gene03987:CDS 40.0%
! TTTATAGTGGGAGAGATTGG+TGG + chr3.2:54599311-54599330 MS.gene03987:CDS 40.0%
! TTTTCCATCACCTTCACATG+TGG + chr3.2:54598507-54598526 MS.gene03987:CDS 40.0%
!! ATAGCAAAGGGACTAGTTGA+AGG + chr3.2:54600111-54600130 MS.gene03987:CDS 40.0%
!! CGAAAGCATTGTAAGCTATC+AGG - chr3.2:54599689-54599708 None:intergenic 40.0%
AAAGCATGTTGTGGAGGAAG+TGG + chr3.2:54599970-54599989 MS.gene03987:CDS 45.0%
ACACCAGCATTACACCCAAT+TGG - chr3.2:54599615-54599634 None:intergenic 45.0%
ACTATTTATTTCGCCCGTCG+TGG + chr3.2:54599076-54599095 MS.gene03987:CDS 45.0%
AGCCAAGAAGACACGAAGAA+AGG + chr3.2:54599016-54599035 MS.gene03987:CDS 45.0%
CACACGCAATGAATGATCTG+TGG - chr3.2:54599119-54599138 None:intergenic 45.0%
CACCACAACAATATGGTGTG+TGG + chr3.2:54599823-54599842 MS.gene03987:intron 45.0%
CACCCAATTGGAAAGTTTCC+AGG - chr3.2:54599603-54599622 None:intergenic 45.0%
CCAAGAAGACACGAAGAAAG+GGG + chr3.2:54599018-54599037 MS.gene03987:CDS 45.0%
CTCCACACACCATATTGTTG+TGG - chr3.2:54599828-54599847 None:intergenic 45.0%
GAATGATCTGTGGTGTTTGG+TGG - chr3.2:54599109-54599128 None:intergenic 45.0%
GAGCCATAAGGACTATTGTC+AGG - chr3.2:54598687-54598706 None:intergenic 45.0%
GCCAAGAAGACACGAAGAAA+GGG + chr3.2:54599017-54599036 MS.gene03987:CDS 45.0%
CATTGCGTGTGCAACTTGAG+TGG + chr3.2:54599128-54599147 MS.gene03987:CDS 50.0%
CCCCTTTCTTCGTGTCTTCT+TGG - chr3.2:54599021-54599040 None:intergenic 50.0%
GCAATGGAGCTAGTGATTCC+TGG + chr3.2:54599582-54599601 MS.gene03987:CDS 50.0%
GCTGAATGCAGCAGCATTTC+CGG - chr3.2:54598652-54598671 None:intergenic 50.0%
! TTGGTGGCATCATTCCACGA+CGG - chr3.2:54599093-54599112 None:intergenic 50.0%
TGGTGGCATCATTCCACGAC+GGG - chr3.2:54599092-54599111 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 54598486 54600182 54598486 ID=MS.gene03987
chr3.2 mRNA 54598486 54600182 54598486 ID=MS.gene03987.t1;Parent=MS.gene03987
chr3.2 exon 54598486 54598768 54598486 ID=MS.gene03987.t1.exon1;Parent=MS.gene03987.t1
chr3.2 CDS 54598486 54598768 54598486 ID=cds.MS.gene03987.t1;Parent=MS.gene03987.t1
chr3.2 exon 54598966 54599190 54598966 ID=MS.gene03987.t1.exon2;Parent=MS.gene03987.t1
chr3.2 CDS 54598966 54599190 54598966 ID=cds.MS.gene03987.t1;Parent=MS.gene03987.t1
chr3.2 exon 54599282 54599427 54599282 ID=MS.gene03987.t1.exon3;Parent=MS.gene03987.t1
chr3.2 CDS 54599282 54599427 54599282 ID=cds.MS.gene03987.t1;Parent=MS.gene03987.t1
chr3.2 exon 54599564 54599837 54599564 ID=MS.gene03987.t1.exon4;Parent=MS.gene03987.t1
chr3.2 CDS 54599564 54599837 54599564 ID=cds.MS.gene03987.t1;Parent=MS.gene03987.t1
chr3.2 exon 54599941 54600182 54599941 ID=MS.gene03987.t1.exon5;Parent=MS.gene03987.t1
chr3.2 CDS 54599941 54600182 54599941 ID=cds.MS.gene03987.t1;Parent=MS.gene03987.t1
Gene Sequence

>MS.gene03987

ATGGTGATGATATTCATTATCTTTTCCATCACCTTCACATGTGGTTTTTTTGGAAATGTTGTTTCAATTTCAAATGGCAATGAGATTTTTGTTCGGGATGAGTCATATGCCAATTCTTTACCTTACGAAGCCATCTTCAATTTTGGTGATTCTATAAGTGACACCGGAAATGCTGCTGCATTCAGCGACAAACATATGCCTGACAATAGTCCTTATGGCTCAACTTACTTCAAACATCCATCTGGACGTTTATCAAATGGACGACTGATTATAGATTTTATAGGTAATTTTACTCTTCTTTATTTAAGTTTGTTCAATAAGATTTTCTAATATGAAAGTAAAAAAAAAATGGCAATGCTAGAAAATGGTATAACATGCTCTTGTTAATATAGTTTGTTAGAATCGTCAAAATTATTAAATCTTAAAGTCAATATATTTATGATTGAAAAATTTACAAGATTGTACTCATTTTAATTGTAGCTGAGGCATACGGATTACCATTTTTGCCGGCATATATGAATGTCAACAATAGCCAAGAAGACACGAAGAAAGGGGTAAATTTTGCATTTGCAGGTGCTAGTGCACTTAAAACTATTTATTTCGCCCGTCGTGGAATGATGCCACCAAACACCACAGATCATTCATTGCGTGTGCAACTTGAGTGGTTTAAGAAACTAAAGCCATTCATGTGTAAAAGCAAAAAAGGTTTCATTATAACTACCTACATATTTTGTTTGTTTTAAATATATAAATCTTCCTCATGAAATAACACAACTTTTGTTATGATGTGGGACAGAATGTACTAGCTACTTCAAAAAATCATTGTTTATAGTGGGAGAGATTGGTGGGAATGATGTTCTGCAGTATATCTCATCTAAAAAGTTTGCAGAAATAAGAAAAGTTGTTCCACCATTGGTTGAATCTATTACACTTACCACCATCGTATGTTATATCAATTTTAAGTACTTGAATGTCTTCTTTAACCATAAAAACTAAGCTCAATTAAAGATATGACTAAATGAATATTATTCTTGGATAAATGTAATAGGGATTTTTTTTTCTATTTTTTTATCTTCAGTCATTAATCAAAGAAGGAGCAATGGAGCTAGTGATTCCTGGAAACTTTCCAATTGGGTGTAATGCTGGTGTTTTGACAAATGTGATTAGTAAGAAGAAGGAAGACTATGATGAACTTGGGTGCCTGATAGCTTACAATGCTTTCGCCGAATACTACAATGAACAACTTAAAAATTCCATAGAGACATTAAGACATAAATACCCTCAAGCTAAGATAATATATTTTGACTACTACAACAATCTCAAACGTTTATATCAAACACCACAACAATATGGTGTGTGGAGTTACTATTATATTTTCTTGTTTATTTTTCCATAATTTATTTTTGTCAAATTCTTTTGAACATGTACGTCATTTTATGTAAATTAATGATGCAGGTTTTATTTCTGATAAGGACGAGATTTTGAAAGCATGTTGTGGAGGAAGTGGACCATACCATGTTGATCTTAAAGTATTTTGTGGAACGGGTAGCTCAACAGTTTGCCCCGACCCTTCAAAATATATAAATTGGGATGGCTCACACTTAACTGAAGCATCTTATAAGTTAATAGCAAAGGGACTAGTTGAAGGCCCTTTTGCAAATCCTTCCCTTAAAACTCCTCTTTTCAATATATCTTAG
Protein sequence

>MS.gene03987.t1

MVMIFIIFSITFTCGFFGNVVSISNGNEIFVRDESYANSLPYEAIFNFGDSISDTGNAAAFSDKHMPDNSPYGSTYFKHPSGRLSNGRLIIDFIAEAYGLPFLPAYMNVNNSQEDTKKGVNFAFAGASALKTIYFARRGMMPPNTTDHSLRVQLEWFKKLKPFMCKSKKECTSYFKKSLFIVGEIGGNDVLQYISSKKFAEIRKVVPPLVESITLTTISLIKEGAMELVIPGNFPIGCNAGVLTNVISKKKEDYDELGCLIAYNAFAEYYNEQLKNSIETLRHKYPQAKIIYFDYYNNLKRLYQTPQQYGFISDKDEILKACCGGSGPYHVDLKVFCGTGSSTVCPDPSKYINWDGSHLTEASYKLIAKGLVEGPFANPSLKTPLFNIS