AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene03988

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03988.t1 MTR_3g463960 92.288 389 29 1 1 389 1 388 0.0 737
MS.gene03988.t1 MTR_3g463950 92.288 389 29 1 1 389 1 388 0.0 737
MS.gene03988.t1 MTR_3g463970 92.288 389 29 1 1 389 1 388 0.0 737
MS.gene03988.t1 MTR_3g463940 92.288 389 29 1 1 389 1 388 0.0 737
MS.gene03988.t1 MTR_3g463930 88.889 396 36 2 1 389 1 395 0.0 711
MS.gene03988.t1 MTR_3g448360 66.150 387 114 4 2 388 1 370 0.0 516
MS.gene03988.t1 MTR_3g438030 65.464 388 117 4 2 389 1 371 3.10e-179 503
MS.gene03988.t1 MTR_3g069780 65.464 388 117 4 2 389 1 371 4.65e-179 503
MS.gene03988.t1 MTR_3g069520 65.026 386 116 5 4 389 3 369 8.43e-177 497
MS.gene03988.t1 MTR_2g079090 64.249 386 109 6 4 389 3 359 1.62e-173 488
MS.gene03988.t1 MTR_0029s0050 64.752 383 106 6 7 389 6 359 9.75e-173 486
MS.gene03988.t1 MTR_2g079080 63.731 386 111 6 4 389 3 359 1.44e-171 483
MS.gene03988.t1 MTR_0029s0100 64.230 383 108 6 7 389 6 359 1.61e-170 480
MS.gene03988.t1 MTR_2g043980 56.701 388 131 8 4 389 9 361 7.24e-143 410
MS.gene03988.t1 MTR_2g015650 47.927 386 182 4 6 389 6 374 1.87e-120 354
MS.gene03988.t1 MTR_2g015670 46.610 354 163 6 41 389 28 360 5.50e-105 314
MS.gene03988.t1 MTR_2g015580 46.686 347 171 6 42 382 45 383 2.43e-100 303
MS.gene03988.t1 MTR_2g015630 45.690 348 176 6 49 389 36 377 1.15e-99 301
MS.gene03988.t1 MTR_2g015590 43.966 348 188 4 35 379 22 365 1.03e-98 298
MS.gene03988.t1 MTR_2g043990 51.299 308 107 7 4 309 71 337 2.56e-93 283
MS.gene03988.t1 MTR_2g015590 44.086 279 152 3 35 310 22 299 5.89e-73 231
MS.gene03988.t1 MTR_4g104240 36.888 347 200 9 39 379 34 367 7.75e-71 227
MS.gene03988.t1 MTR_3g466240 51.376 218 74 2 118 332 2 190 1.59e-68 214
MS.gene03988.t1 MTR_8g028160 35.475 358 194 13 42 379 34 374 4.93e-56 189
MS.gene03988.t1 MTR_1g030220 35.000 400 209 14 4 381 8 378 1.14e-54 185
MS.gene03988.t1 MTR_7g116870 33.994 353 202 10 42 379 31 367 1.91e-54 184
MS.gene03988.t1 MTR_7g087190 33.161 386 201 13 28 381 25 385 2.42e-54 184
MS.gene03988.t1 MTR_1g030268 34.903 361 192 13 42 381 38 376 4.07e-51 176
MS.gene03988.t1 MTR_3g466190 55.689 167 52 4 72 238 7 151 1.31e-50 170
MS.gene03988.t1 MTR_3g466190 66.667 78 25 1 311 388 152 228 1.30e-27 109
MS.gene03988.t1 MTR_1g030340 33.005 406 205 15 1 381 18 381 3.23e-50 174
MS.gene03988.t1 MTR_1g030230 34.262 359 195 12 44 381 32 370 9.41e-50 172
MS.gene03988.t1 MTR_6g007090 34.670 349 202 10 42 379 37 370 2.12e-49 171
MS.gene03988.t1 MTR_7g111780 31.831 355 203 11 44 386 36 363 2.85e-47 165
MS.gene03988.t1 MTR_8g089805 33.422 374 195 12 37 381 33 381 2.99e-47 166
MS.gene03988.t1 MTR_7g033165 32.718 379 207 15 31 386 22 375 3.98e-47 165
MS.gene03988.t1 MTR_1g030275 34.066 364 191 14 42 381 37 375 2.14e-46 163
MS.gene03988.t1 MTR_7g033150 33.423 371 201 14 37 381 28 378 2.82e-46 163
MS.gene03988.t1 MTR_1g082390 32.597 362 213 11 37 381 22 369 1.43e-44 158
MS.gene03988.t1 MTR_7g113860 32.597 362 202 12 40 379 25 366 2.27e-44 158
MS.gene03988.t1 MTR_7g113860 31.649 376 211 14 29 379 18 372 9.50e-44 156
MS.gene03988.t1 MTR_7g033155 31.620 389 209 14 31 381 23 392 1.81e-43 156
MS.gene03988.t1 MTR_6g007095 31.000 400 222 12 1 379 6 372 2.84e-43 160
MS.gene03988.t1 MTR_6g007095 27.762 353 196 7 59 381 367 690 1.30e-31 127
MS.gene03988.t1 MTR_8g038680 32.113 355 208 12 42 379 26 364 7.87e-39 143
MS.gene03988.t1 MTR_1g030268 34.138 290 166 9 42 320 38 313 3.45e-38 140
MS.gene03988.t1 MTR_1g030265 32.248 307 172 10 95 381 53 343 2.87e-36 135
MS.gene03988.t1 MTR_6g007100 28.460 383 235 12 1 379 6 353 1.61e-33 128
MS.gene03988.t1 MTR_4g056280 28.836 378 216 13 9 372 6 344 5.67e-33 127
MS.gene03988.t1 MTR_5g022630 29.006 362 212 14 20 367 24 354 1.47e-32 125
MS.gene03988.t1 MTR_7g033165 32.550 298 163 10 31 314 22 295 2.36e-32 124
MS.gene03988.t1 MTR_2g033930 29.096 354 216 12 30 374 20 347 3.36e-32 125
MS.gene03988.t1 MTR_8g022810 28.933 356 212 13 29 368 22 352 5.73e-32 124
MS.gene03988.t1 MTR_8g031420 31.198 359 207 16 40 388 29 357 1.37e-31 123
MS.gene03988.t1 MTR_4g056160 28.783 337 213 9 44 372 27 344 2.17e-31 122
MS.gene03988.t1 MTR_2g015080 29.683 347 207 15 33 364 29 353 5.65e-31 121
MS.gene03988.t1 MTR_1g025780 28.529 340 207 12 44 373 41 354 6.91e-31 121
MS.gene03988.t1 MTR_7g111780 29.818 275 157 9 119 381 9 259 1.05e-30 118
MS.gene03988.t1 MTR_8g031430 31.117 376 214 19 8 374 10 349 1.93e-30 120
MS.gene03988.t1 MTR_8g031390 30.056 356 207 15 40 384 31 355 5.08e-30 119
MS.gene03988.t1 MTR_8g031400 31.884 345 199 13 40 374 31 349 1.63e-29 117
MS.gene03988.t1 MTR_3g052580 28.333 360 219 11 44 389 28 362 2.18e-29 117
MS.gene03988.t1 MTR_3g052580 28.333 360 219 11 44 389 27 361 2.23e-29 118
MS.gene03988.t1 MTR_8g014910 26.842 380 228 12 2 372 9 347 3.86e-29 116
MS.gene03988.t1 MTR_5g022640 27.604 384 220 13 7 373 17 359 6.61e-29 115
MS.gene03988.t1 MTR_8g012540 31.707 328 191 12 42 352 26 337 1.08e-28 115
MS.gene03988.t1 MTR_3g052490 28.986 345 207 11 44 375 32 351 1.56e-28 115
MS.gene03988.t1 MTR_2g100620 27.988 343 206 14 44 372 31 346 3.52e-28 114
MS.gene03988.t1 MTR_5g074270 30.110 362 210 16 20 369 16 346 7.13e-28 113
MS.gene03988.t1 MTR_7g113860 29.126 309 179 11 93 379 8 298 3.22e-27 110
MS.gene03988.t1 MTR_2g033920 27.493 371 210 11 28 374 17 352 3.41e-27 111
MS.gene03988.t1 MTR_2g044100 26.891 357 217 15 37 377 36 364 4.63e-27 111
MS.gene03988.t1 MTR_4g087985 29.060 351 209 14 44 374 36 366 4.78e-27 110
MS.gene03988.t1 MTR_8g089805 29.677 310 169 10 100 381 25 313 7.78e-27 109
MS.gene03988.t1 MTR_1g025680 28.324 346 202 13 44 373 34 349 8.75e-27 111
MS.gene03988.t1 MTR_5g084750 28.933 356 205 14 38 377 26 349 9.48e-27 109
MS.gene03988.t1 MTR_1g025720 27.826 345 198 14 42 368 35 346 2.69e-26 108
MS.gene03988.t1 MTR_3g052480 29.310 348 203 13 44 375 33 353 2.96e-26 108
MS.gene03988.t1 MTR_3g005650 27.711 332 209 10 44 369 30 336 3.08e-26 108
MS.gene03988.t1 MTR_2g084585 28.406 345 201 14 44 372 30 344 8.44e-26 107
MS.gene03988.t1 MTR_8g075230 26.923 338 217 9 44 373 36 351 1.54e-25 106
MS.gene03988.t1 MTR_8g079050 26.786 392 226 15 1 374 12 360 2.57e-25 106
MS.gene03988.t1 MTR_1g025700 26.901 342 211 13 44 373 50 364 3.13e-25 105
MS.gene03988.t1 MTR_3g082830 27.273 352 206 12 44 377 38 357 1.25e-24 103
MS.gene03988.t1 MTR_8g031390 30.872 298 173 12 40 330 31 302 1.26e-24 103
MS.gene03988.t1 MTR_3g114120 29.706 340 195 15 44 368 47 357 1.46e-24 103
MS.gene03988.t1 MTR_5g084770 27.941 340 210 12 44 372 28 343 1.53e-24 103
MS.gene03988.t1 MTR_1g025760 27.859 341 210 11 44 373 80 395 1.74e-24 104
MS.gene03988.t1 MTR_3g098270 26.562 384 234 13 20 385 8 361 1.78e-24 103
MS.gene03988.t1 MTR_5g009100 26.686 341 218 10 46 377 48 365 1.80e-24 103
MS.gene03988.t1 MTR_5g078210 27.083 336 201 14 48 369 29 334 9.16e-24 101
MS.gene03988.t1 MTR_4g035353 25.143 350 226 11 37 375 24 348 1.22e-23 101
MS.gene03988.t1 MTR_1g025910 27.726 321 208 13 49 365 41 341 3.24e-23 100
MS.gene03988.t1 MTR_8g087890 25.588 340 206 10 46 369 33 341 3.34e-23 100
MS.gene03988.t1 MTR_8g075220 27.434 339 223 9 42 373 38 360 3.44e-23 100
MS.gene03988.t1 MTR_3g114090 27.457 346 215 12 39 373 31 351 6.08e-23 99.4
MS.gene03988.t1 MTR_7g116520 27.171 357 210 15 36 374 26 350 6.78e-23 99.4
MS.gene03988.t1 MTR_4g122200 26.648 349 219 11 37 374 30 352 9.47e-23 99.0
MS.gene03988.t1 MTR_5g084790 27.273 352 206 13 44 377 32 351 1.14e-22 98.2
MS.gene03988.t1 MTR_5g093090 26.513 347 211 12 44 374 28 346 1.46e-22 98.2
MS.gene03988.t1 MTR_8g075200 27.378 347 226 11 33 373 30 356 1.51e-22 98.6
MS.gene03988.t1 MTR_0565s0010 24.551 334 218 10 46 369 34 343 3.63e-22 97.1
MS.gene03988.t1 MTR_7g116510 27.874 348 206 13 43 374 24 342 1.13e-21 95.5
MS.gene03988.t1 MTR_3g435540 26.979 341 209 13 46 373 25 338 1.93e-21 95.1
MS.gene03988.t1 MTR_3g464730 26.012 346 225 11 37 373 21 344 2.15e-21 94.7
MS.gene03988.t1 MTR_0009s0250 26.087 345 215 14 44 380 33 345 2.61e-21 94.4
MS.gene03988.t1 MTR_1g024890 27.042 355 213 16 36 374 24 348 5.86e-21 93.6
MS.gene03988.t1 MTR_7g116570 25.915 355 215 13 43 379 33 357 6.04e-21 93.6
MS.gene03988.t1 MTR_5g083040 26.471 340 218 11 44 371 32 351 8.96e-21 93.2
MS.gene03988.t1 MTR_1g069175 27.246 345 213 13 43 374 32 351 9.40e-21 93.2
MS.gene03988.t1 MTR_4g108690 25.513 341 214 13 46 373 29 342 9.93e-21 92.8
MS.gene03988.t1 MTR_1g092750 27.679 336 192 16 45 367 41 338 3.24e-20 91.3
MS.gene03988.t1 MTR_7g116500 26.966 356 226 14 29 374 18 349 6.93e-20 90.5
MS.gene03988.t1 MTR_2g017965 28.060 335 199 15 45 368 34 337 1.86e-19 89.4
MS.gene03988.t1 MTR_5g078210 28.159 277 170 9 48 313 29 287 2.04e-19 88.6
MS.gene03988.t1 MTR_3g005660 25.816 337 213 13 46 369 38 350 2.26e-19 89.0
MS.gene03988.t1 MTR_7g104220 28.070 342 191 15 45 371 43 344 3.26e-19 88.6
MS.gene03988.t1 MTR_4g019880 26.257 358 228 14 29 374 17 350 4.10e-19 88.2
MS.gene03988.t1 MTR_1g079540 27.019 359 224 15 33 379 22 354 6.00e-19 87.8
MS.gene03988.t1 MTR_1g060490 24.926 337 207 13 41 367 34 334 9.71e-19 87.0
MS.gene03988.t1 MTR_2g033920 26.059 307 175 9 28 310 17 295 1.55e-18 85.9
MS.gene03988.t1 MTR_3g021460 24.090 357 224 10 28 374 16 335 2.82e-18 85.5
MS.gene03988.t1 MTR_8g022810 29.339 242 141 9 29 256 22 247 1.60e-17 83.2
MS.gene03988.t1 MTR_1g060500 25.507 345 211 13 41 371 37 349 1.76e-17 83.6
MS.gene03988.t1 MTR_2g017925 27.083 336 196 14 45 368 34 332 4.82e-17 82.4
MS.gene03988.t1 MTR_2g017955 24.860 358 213 14 45 385 34 352 7.47e-17 81.6
MS.gene03988.t1 MTR_8g022790 24.561 342 218 11 42 374 35 345 7.67e-17 81.6
MS.gene03988.t1 MTR_3g024510 23.724 333 221 12 46 369 40 348 1.52e-16 80.9
MS.gene03988.t1 MTR_2g461580 23.256 344 218 9 44 377 31 338 2.45e-16 80.1
MS.gene03988.t1 MTR_1g092760 25.449 334 213 11 45 371 40 344 4.77e-16 79.0
MS.gene03988.t1 MTR_2g017915 24.928 349 203 13 45 385 34 331 3.38e-15 76.6
MS.gene03988.t1 MTR_6g021530 25.797 345 219 13 48 379 33 353 3.55e-15 76.6
MS.gene03988.t1 MTR_2g017875 24.731 372 226 16 30 385 20 353 6.74e-15 75.9
MS.gene03988.t1 MTR_1g092740 26.023 342 210 15 35 369 32 337 1.93e-14 74.3
MS.gene03988.t1 MTR_8g087870 26.331 357 204 15 45 385 30 343 2.21e-14 73.9
MS.gene03988.t1 MTR_1108s0010 27.111 225 135 6 153 372 3 203 2.68e-14 72.0
MS.gene03988.t1 MTR_1g092690 25.305 328 202 13 45 364 52 344 6.39e-14 72.8
MS.gene03988.t1 MTR_7g008060 23.907 343 212 14 43 374 32 336 7.73e-14 72.4
MS.gene03988.t1 MTR_1g082410 27.446 368 160 18 37 381 21 304 9.31e-14 72.0
MS.gene03988.t1 MTR_0127s0040 27.317 205 126 5 170 368 30 217 9.39e-14 70.9
MS.gene03988.t1 MTR_1g079530 24.269 342 219 13 43 374 28 339 1.10e-13 72.0
MS.gene03988.t1 MTR_8g074560 24.722 360 216 17 44 379 31 359 4.93e-13 70.1
MS.gene03988.t1 MTR_5g074210 32.432 148 87 5 224 371 70 204 9.41e-12 64.7
MS.gene03988.t1 MTR_4g056220 33.945 109 65 2 264 372 80 181 2.10e-11 63.2
MS.gene03988.t1 MTR_2g018015 27.523 218 137 8 30 237 24 230 4.40e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03988.t1 AT5G45910 47.354 359 179 6 29 380 15 370 1.84e-108 323
MS.gene03988.t1 AT1G28610 45.070 355 183 6 31 381 20 366 1.41e-100 303
MS.gene03988.t1 AT1G28600 44.606 343 178 6 42 379 29 364 3.58e-98 298
MS.gene03988.t1 AT1G28570 44.350 354 182 7 35 379 21 368 4.11e-95 290
MS.gene03988.t1 AT1G28590 43.931 346 183 6 42 382 34 373 1.61e-94 289
MS.gene03988.t1 AT1G28580 43.732 343 182 7 42 379 35 371 1.68e-93 286
MS.gene03988.t1 AT1G31550 43.440 343 182 6 42 379 34 369 3.78e-93 285
MS.gene03988.t1 AT2G27360 42.733 344 185 8 42 379 31 368 8.99e-92 281
MS.gene03988.t1 AT1G28640 42.029 345 189 7 42 381 33 371 2.38e-90 278
MS.gene03988.t1 AT1G28670 42.486 346 187 8 42 381 33 372 8.70e-90 276
MS.gene03988.t1 AT1G28660 42.609 345 187 7 42 381 33 371 1.21e-89 275
MS.gene03988.t1 AT1G31550 42.857 343 181 7 42 379 34 366 2.31e-89 275
MS.gene03988.t1 AT1G28660 42.899 345 185 8 42 381 33 370 9.51e-89 273
MS.gene03988.t1 AT1G28650 41.449 345 191 6 42 381 35 373 1.10e-87 270
MS.gene03988.t1 AT1G28580 40.753 292 165 5 90 379 5 290 1.79e-71 226
MS.gene03988.t1 AT3G48460 38.068 352 187 11 41 379 35 368 5.21e-71 228
MS.gene03988.t1 AT5G03980 34.188 351 169 7 29 371 14 310 1.27e-58 194
MS.gene03988.t1 AT1G28570 42.453 212 117 3 170 379 88 296 6.13e-54 181
MS.gene03988.t1 AT1G28570 55.224 67 23 2 35 94 21 87 1.12e-12 68.9
MS.gene03988.t1 AT1G28570 42.995 207 113 3 175 379 2 205 2.16e-53 177
MS.gene03988.t1 AT4G01130 33.333 357 203 10 42 379 32 372 2.86e-53 181
MS.gene03988.t1 AT1G56670 31.458 391 228 13 1 379 1 363 7.67e-50 172
MS.gene03988.t1 AT1G54790 31.806 371 209 12 40 386 28 378 1.32e-49 172
MS.gene03988.t1 AT1G67830 31.180 356 217 9 35 374 21 364 3.73e-44 157
MS.gene03988.t1 AT1G54790 29.765 383 223 13 30 386 15 377 9.42e-44 156
MS.gene03988.t1 AT1G28600 44.693 179 91 4 42 216 29 203 6.71e-43 149
MS.gene03988.t1 AT1G09390 30.836 347 206 9 44 379 37 360 1.02e-42 153
MS.gene03988.t1 AT3G26430 33.515 367 200 14 39 381 26 372 1.37e-42 153
MS.gene03988.t1 AT5G14450 30.141 355 216 9 42 379 39 378 2.63e-42 152
MS.gene03988.t1 AT3G05180 31.111 360 210 13 37 377 31 371 5.67e-42 151
MS.gene03988.t1 AT3G62280 29.651 344 210 10 45 379 37 357 3.40e-41 149
MS.gene03988.t1 AT1G28610 42.246 187 100 4 31 214 20 201 1.61e-39 141
MS.gene03988.t1 AT1G54790 28.395 405 226 13 30 386 15 403 2.31e-39 145
MS.gene03988.t1 AT4G01130 33.333 279 164 7 42 310 32 298 7.67e-37 137
MS.gene03988.t1 AT3G27950 29.839 372 206 11 37 383 25 366 1.43e-35 134
MS.gene03988.t1 AT1G71120 28.902 346 197 11 44 374 31 342 1.13e-32 126
MS.gene03988.t1 AT1G20120 31.412 347 203 11 42 376 76 399 1.20e-32 127
MS.gene03988.t1 AT1G56670 30.218 321 189 11 1 310 1 297 1.78e-32 124
MS.gene03988.t1 AT1G23500 28.613 346 211 12 34 374 25 339 2.02e-31 122
MS.gene03988.t1 AT1G53920 28.852 357 218 13 44 389 48 379 2.70e-31 123
MS.gene03988.t1 AT4G01130 28.188 298 184 8 100 379 1 286 1.73e-30 119
MS.gene03988.t1 AT1G73610 28.902 346 206 14 34 373 26 337 4.15e-30 119
MS.gene03988.t1 AT1G75880 27.838 370 239 10 10 373 21 368 1.16e-29 118
MS.gene03988.t1 AT1G75880 27.838 370 238 10 10 373 21 367 1.85e-29 117
MS.gene03988.t1 AT1G20132 28.235 340 210 12 44 373 61 376 2.65e-29 117
MS.gene03988.t1 AT5G40990 32.184 348 194 16 44 375 37 358 5.52e-29 116
MS.gene03988.t1 AT1G75890 27.893 337 216 10 44 373 47 363 6.14e-29 116
MS.gene03988.t1 AT5G45950 28.657 335 201 12 44 369 40 345 1.14e-28 115
MS.gene03988.t1 AT1G75890 27.429 350 214 11 44 373 47 376 1.19e-28 115
MS.gene03988.t1 AT1G75890 27.893 337 216 10 44 373 76 392 1.42e-28 115
MS.gene03988.t1 AT2G40250 28.242 347 205 12 39 368 31 350 1.94e-28 114
MS.gene03988.t1 AT1G06990 27.720 386 239 14 1 376 1 356 2.29e-28 114
MS.gene03988.t1 AT5G41890 29.444 360 214 14 46 388 33 369 4.47e-28 114
MS.gene03988.t1 AT4G10950 27.684 354 215 12 35 374 61 387 1.03e-27 113
MS.gene03988.t1 AT5G15720 26.269 335 217 11 44 369 30 343 1.87e-27 112
MS.gene03988.t1 AT1G75900 26.243 362 220 10 29 372 24 356 4.49e-27 110
MS.gene03988.t1 AT1G53940 30.636 346 202 16 44 375 39 360 1.23e-26 110
MS.gene03988.t1 AT5G63170 28.235 340 196 13 35 364 21 322 2.16e-26 108
MS.gene03988.t1 AT1G75920 28.371 356 201 12 31 373 22 336 7.34e-26 107
MS.gene03988.t1 AT2G42990 27.628 333 211 11 44 368 28 338 1.01e-25 107
MS.gene03988.t1 AT1G71250 25.740 338 225 8 44 375 41 358 1.93e-25 106
MS.gene03988.t1 AT3G16370 26.629 353 224 13 35 377 23 350 2.23e-25 105
MS.gene03988.t1 AT5G45960 28.107 338 213 12 44 371 47 364 2.76e-25 106
MS.gene03988.t1 AT1G20130 27.566 341 218 11 44 373 204 526 3.25e-25 107
MS.gene03988.t1 AT3G14225 28.169 355 218 14 44 384 37 368 3.45e-25 105
MS.gene03988.t1 AT3G14225 28.045 353 217 14 44 384 37 364 3.98e-25 105
MS.gene03988.t1 AT2G04570 26.705 352 222 12 35 376 21 346 4.31e-25 105
MS.gene03988.t1 AT4G10950 27.401 354 212 13 35 374 61 383 4.59e-25 105
MS.gene03988.t1 AT1G20130 27.566 341 218 11 44 373 184 506 4.77e-25 107
MS.gene03988.t1 AT5G08460 27.566 341 209 11 42 368 47 363 1.17e-24 104
MS.gene03988.t1 AT3G62280 27.737 274 171 8 45 310 37 291 1.45e-24 102
MS.gene03988.t1 AT2G23540 29.379 354 197 14 44 374 48 371 1.88e-24 103
MS.gene03988.t1 AT3G04290 27.647 340 216 11 43 374 28 345 2.77e-24 103
MS.gene03988.t1 AT1G75910 27.119 354 215 14 30 373 16 336 3.19e-24 102
MS.gene03988.t1 AT1G20135 26.113 337 211 9 37 367 22 326 5.73e-24 101
MS.gene03988.t1 AT1G71691 27.326 344 206 10 44 374 55 367 6.28e-24 102
MS.gene03988.t1 AT4G26790 26.023 342 219 13 42 373 27 344 1.06e-23 101
MS.gene03988.t1 AT4G26790 26.023 342 219 13 42 373 27 344 1.06e-23 101
MS.gene03988.t1 AT1G74460 27.273 341 208 12 46 373 25 338 1.39e-23 101
MS.gene03988.t1 AT3G14820 27.139 339 209 12 44 372 32 342 1.84e-23 100
MS.gene03988.t1 AT5G42170 26.807 332 220 10 44 372 50 361 2.57e-23 100
MS.gene03988.t1 AT1G29670 27.353 340 199 12 46 369 34 341 5.63e-23 99.4
MS.gene03988.t1 AT1G75920 28.483 323 182 12 65 373 21 308 9.34e-23 97.8
MS.gene03988.t1 AT5G18430 26.225 347 214 12 43 374 27 346 1.24e-22 98.6
MS.gene03988.t1 AT1G29670 27.353 340 199 12 46 369 102 409 1.28e-22 99.4
MS.gene03988.t1 AT1G75920 27.493 371 200 13 31 373 17 346 1.84e-22 97.8
MS.gene03988.t1 AT1G53990 26.515 396 234 16 1 384 5 355 1.88e-22 97.8
MS.gene03988.t1 AT1G59406 26.979 341 210 10 44 373 30 342 2.12e-22 97.4
MS.gene03988.t1 AT1G59030 26.979 341 210 10 44 373 30 342 2.12e-22 97.4
MS.gene03988.t1 AT1G58725 26.979 341 210 10 44 373 30 342 2.12e-22 97.4
MS.gene03988.t1 AT1G75930 25.275 364 212 15 28 372 13 335 3.92e-22 96.7
MS.gene03988.t1 AT5G22810 25.806 341 218 9 44 372 34 351 4.09e-22 97.1
MS.gene03988.t1 AT5G03820 26.023 342 215 13 44 372 33 349 5.89e-22 96.3
MS.gene03988.t1 AT3G53100 26.822 343 209 13 44 372 29 343 6.72e-22 96.3
MS.gene03988.t1 AT2G31540 28.492 358 201 18 42 376 33 358 1.00e-21 95.9
MS.gene03988.t1 AT5G03810 26.608 342 212 13 44 372 30 345 1.40e-21 95.1
MS.gene03988.t1 AT5G03820 26.023 342 215 13 44 372 61 377 1.65e-21 95.5
MS.gene03988.t1 AT3G50400 27.273 363 222 13 30 374 20 358 2.97e-21 94.7
MS.gene03988.t1 AT3G09930 25.982 331 208 12 45 367 40 341 3.90e-21 94.0
MS.gene03988.t1 AT3G09930 25.982 331 208 12 45 367 40 341 3.90e-21 94.0
MS.gene03988.t1 AT2G19060 27.089 347 203 14 46 379 32 341 6.89e-21 93.2
MS.gene03988.t1 AT2G03980 26.488 336 213 11 42 368 41 351 1.81e-20 92.4
MS.gene03988.t1 AT2G03980 26.488 336 213 11 42 368 41 351 1.81e-20 92.4
MS.gene03988.t1 AT2G03980 26.488 336 213 11 42 368 41 351 1.81e-20 92.4
MS.gene03988.t1 AT2G03980 26.488 336 213 11 42 368 41 351 1.81e-20 92.4
MS.gene03988.t1 AT1G58520 26.471 340 206 9 44 373 30 335 2.72e-20 91.3
MS.gene03988.t1 AT1G58525 26.471 340 206 9 44 373 30 335 2.72e-20 91.3
MS.gene03988.t1 AT5G33370 26.316 342 218 12 43 374 29 346 3.22e-20 91.7
MS.gene03988.t1 AT2G19010 27.457 346 201 14 46 379 32 339 3.44e-20 91.3
MS.gene03988.t1 AT5G15720 25.362 276 184 8 44 310 30 292 3.64e-20 90.5
MS.gene03988.t1 AT2G19010 27.457 346 201 14 46 379 62 369 3.65e-20 91.7
MS.gene03988.t1 AT2G24560 27.635 351 215 17 35 371 24 349 7.74e-20 90.5
MS.gene03988.t1 AT1G53940 30.545 275 167 11 44 310 39 297 1.88e-19 88.6
MS.gene03988.t1 AT1G33811 25.588 340 214 15 45 369 35 350 3.29e-19 88.6
MS.gene03988.t1 AT5G55050 27.515 338 208 12 44 367 39 353 3.65e-19 88.6
MS.gene03988.t1 AT1G29660 26.048 334 212 13 46 369 34 342 9.83e-19 87.0
MS.gene03988.t1 AT2G19050 26.590 346 204 14 46 377 33 342 1.01e-18 87.0
MS.gene03988.t1 AT4G28780 26.648 349 220 14 43 379 30 354 1.08e-18 87.0
MS.gene03988.t1 AT1G58430 26.225 347 210 15 42 371 33 350 1.82e-18 86.3
MS.gene03988.t1 AT5G03610 24.603 378 244 14 3 373 7 350 3.10e-18 85.9
MS.gene03988.t1 AT1G54020 25.581 387 227 19 7 385 8 341 8.56e-18 84.7
MS.gene03988.t1 AT5G45670 24.118 340 212 10 46 369 31 340 1.40e-17 84.0
MS.gene03988.t1 AT1G71691 27.240 279 169 7 44 310 55 311 1.55e-17 83.2
MS.gene03988.t1 AT4G18970 24.189 339 213 10 46 369 30 339 7.11e-17 81.6
MS.gene03988.t1 AT5G37690 23.315 356 225 13 34 371 13 338 7.49e-17 81.6
MS.gene03988.t1 AT4G18970 24.260 338 212 10 46 368 30 338 7.61e-17 82.0
MS.gene03988.t1 AT5G15720 23.944 284 187 10 94 368 48 311 1.47e-16 80.5
MS.gene03988.t1 AT1G75920 25.071 351 188 11 31 373 22 305 1.62e-16 80.1
MS.gene03988.t1 AT2G36325 23.939 330 213 12 45 367 48 346 2.56e-14 73.9
MS.gene03988.t1 AT5G03600 23.262 374 231 12 4 367 15 342 2.88e-14 73.9
MS.gene03988.t1 AT3G14210 26.519 362 208 18 40 385 32 351 4.25e-14 73.6
MS.gene03988.t1 AT1G54000 24.490 343 210 14 41 371 33 338 8.78e-14 72.8
MS.gene03988.t1 AT1G71691 24.916 297 179 10 91 374 1 266 1.99e-13 70.5
MS.gene03988.t1 AT5G03600 24.024 333 203 11 45 367 15 307 2.56e-13 70.9
MS.gene03988.t1 AT2G24560 27.586 290 179 14 35 310 24 296 5.83e-13 69.7
MS.gene03988.t1 AT1G54030 22.462 325 209 10 43 363 51 336 1.79e-12 68.9
MS.gene03988.t1 AT3G14220 24.036 337 205 13 45 368 33 331 3.62e-12 67.8
MS.gene03988.t1 AT5G37690 22.191 356 221 14 34 371 13 330 7.06e-12 66.6
MS.gene03988.t1 AT2G19050 26.336 262 159 9 46 297 33 270 8.47e-12 65.9
MS.gene03988.t1 AT2G04020 26.887 212 143 6 42 249 41 244 3.91e-11 63.5

Find 63 sgRNAs with CRISPR-Local

Find 105 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCCTTCAAAATATATAAAT+TGG 0.130836 3.2:+54587085 MS.gene03988:CDS
CCCCTTTCTTCGTGTCTTCT+TGG 0.142457 3.2:-54586051 None:intergenic
TACGAAGCCATCTTCAATTT+TGG 0.178136 3.2:+54585642 MS.gene03988:CDS
GCTGAATGCAGCAGCATTTC+CGG 0.257779 3.2:-54585682 None:intergenic
TTTATGTCTTAATGTCTCTA+TGG 0.322722 3.2:-54586772 None:intergenic
CACCCAATTGGAAAGTTTCC+AGG 0.330852 3.2:-54586633 None:intergenic
AAGTTGTTCATTGTAGTATT+CGG 0.350636 3.2:-54586742 None:intergenic
ATGCCTGAAAATAGTCCTTA+TGG 0.355145 3.2:+54585714 MS.gene03988:CDS
TATCAAACACCACAACAATA+TGG 0.370274 3.2:+54586849 MS.gene03988:CDS
CGAAAGCATTGTAAGCTATC+AGG 0.379885 3.2:-54586719 None:intergenic
ATTCCTGGAAACTTTCCAAT+TGG 0.402546 3.2:+54586630 MS.gene03988:CDS
TTGTTTATAGTGGGAGAGAT+TGG 0.429569 3.2:+54586341 MS.gene03988:CDS
AATGTTGTTTCAATTTCAAA+TGG 0.430898 3.2:+54585573 MS.gene03988:CDS
GCCAAGAAGACACGAAGAAA+GGG 0.431517 3.2:+54586050 MS.gene03988:CDS
GCAATGGAGCTAGTGATTCC+TGG 0.440053 3.2:+54586615 MS.gene03988:CDS
CTTCAGTCATTAATCAAAGA+AGG 0.446875 3.2:+54586591 MS.gene03988:intron
AAGAAAAGTTGTTCCACCAT+TGG 0.452343 3.2:+54586412 MS.gene03988:CDS
CCCTTCAAAATATATAAATT+GGG 0.454082 3.2:+54587086 MS.gene03988:CDS
TTAAGGGAAGGATTTGCAAA+AGG 0.454628 3.2:-54587168 None:intergenic
TTCCTGGAAACTTTCCAATT+GGG 0.455772 3.2:+54586631 MS.gene03988:CDS
ACACCAGCATTACACCCAAT+TGG 0.462222 3.2:-54586645 None:intergenic
AATATATTATCTTAGCTTGA+GGG 0.464764 3.2:-54586797 None:intergenic
AGAATCACCAAAATTGAAGA+TGG 0.466360 3.2:-54585649 None:intergenic
AAGGAAGACTATGATGAACT+TGG 0.478477 3.2:+54586693 MS.gene03988:CDS
GGCTTCGTAAGGTAAAGAAT+TGG 0.479011 3.2:-54585628 None:intergenic
TAAGGGAAGGATTTGCAAAA+GGG 0.481951 3.2:-54587167 None:intergenic
ACTTACTTCAAACATCCATC+TGG 0.482860 3.2:+54585741 MS.gene03988:CDS
TTATAGTGGGAGAGATTGGT+GGG 0.487433 3.2:+54586345 MS.gene03988:CDS
TTGAAGTAAGTTGAGCCATA+AGG 0.494864 3.2:-54585729 None:intergenic
TTTCCAATTGGGTGTAATGC+TGG 0.500453 3.2:+54586642 MS.gene03988:CDS
AAATGTGATTAGTAAGAAGA+AGG 0.505122 3.2:+54586674 MS.gene03988:CDS
AAAGCATGTTGTGGAGGAAG+TGG 0.510426 3.2:+54587003 MS.gene03988:CDS
TGGTGGCATCATTCCACGAC+GGG 0.510932 3.2:-54586122 None:intergenic
TTTATAGTGGGAGAGATTGG+TGG 0.512093 3.2:+54586344 MS.gene03988:CDS
AGCCAAGAAGACACGAAGAA+AGG 0.513729 3.2:+54586049 MS.gene03988:CDS
TTCTAAGATATATTGAAAAG+AGG 0.518550 3.2:-54587195 None:intergenic
ATCTTATAAGTTAATAGCAA+AGG 0.520142 3.2:+54587131 MS.gene03988:CDS
AATGAATGATCTGTGGTGTT+TGG 0.520693 3.2:-54586142 None:intergenic
TCTTATAAGTTAATAGCAAA+GGG 0.521089 3.2:+54587132 MS.gene03988:CDS
TTGTTGACATTCATATATGC+CGG 0.525369 3.2:-54586025 None:intergenic
ACTATTTATTTCGCCCGTCG+TGG 0.534707 3.2:+54586109 MS.gene03988:CDS
TTAATTGTAGCTGAGGCATA+CGG 0.536180 3.2:+54585989 MS.gene03988:intron
ACTTTAAGATCAACATGGTA+TGG 0.540683 3.2:-54587027 None:intergenic
AAATATATTATCTTAGCTTG+AGG 0.542778 3.2:-54586798 None:intergenic
ATAGCAAAGGGACTAGTTGA+AGG 0.549807 3.2:+54587144 MS.gene03988:CDS
AAAACCACATGTGAAGGTGA+TGG 0.559909 3.2:-54585544 None:intergenic
TCAAAATATATAAATTGGGA+TGG 0.562252 3.2:+54587090 MS.gene03988:CDS
ATTAATCAAAGAAGGAGCAA+TGG 0.563591 3.2:+54586599 MS.gene03988:CDS
GAATGATCTGTGGTGTTTGG+TGG 0.570728 3.2:-54586139 None:intergenic
AGTGTAATAGATTCAACCAA+TGG 0.580015 3.2:-54586428 None:intergenic
CATTGCGTGTGCAACTTGAG+TGG 0.582672 3.2:+54586161 MS.gene03988:CDS
CCATTCGATAAACGTCCAGA+TGG 0.592371 3.2:-54585756 None:intergenic
GGTGATTCTATAAGTGACAC+CGG 0.593539 3.2:+54585663 MS.gene03988:CDS
CCATCTGGACGTTTATCGAA+TGG 0.593553 3.2:+54585756 MS.gene03988:CDS
CTCCACACACCATATTGTTG+TGG 0.599527 3.2:-54586858 None:intergenic
AAATTGAAGATGGCTTCGTA+AGG 0.607757 3.2:-54585639 None:intergenic
AGGAAGACTATGATGAACTT+GGG 0.616167 3.2:+54586694 MS.gene03988:CDS
GTAATAGATTCAACCAATGG+TGG 0.620270 3.2:-54586425 None:intergenic
CCAAGAAGACACGAAGAAAG+GGG 0.652855 3.2:+54586051 MS.gene03988:CDS
ATTGATATAACATACGATGG+TGG 0.657430 3.2:-54586453 None:intergenic
TTGGTGGCATCATTCCACGA+CGG 0.688686 3.2:-54586123 None:intergenic
CACACGCAATGAATGATCTG+TGG 0.710194 3.2:-54586149 None:intergenic
AAAATACTTTAAGATCAACA+TGG 0.728528 3.2:-54587032 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTGACAAAAATAAATTA+TGG - chr3.2:54586912-54586931 None:intergenic 10.0%
!! AAAAAATCATTGTTTATAGT+GGG + chr3.2:54586332-54586351 MS.gene03988:CDS 15.0%
!! TTAAAACAAACAAAATATGT+AGG - chr3.2:54586242-54586261 None:intergenic 15.0%
!! AAAATTGATATAACATACGA+TGG - chr3.2:54586459-54586478 None:intergenic 20.0%
!! ACCCTTCAAAATATATAAAT+TGG + chr3.2:54587085-54587104 MS.gene03988:CDS 20.0%
!! ATCTTATAAGTTAATAGCAA+AGG + chr3.2:54587131-54587150 MS.gene03988:CDS 20.0%
!! ATTCTTGGATAAATGTAATA+GGG + chr3.2:54586546-54586565 MS.gene03988:intron 20.0%
!! CAAAAAATCATTGTTTATAG+TGG + chr3.2:54586331-54586350 MS.gene03988:CDS 20.0%
!! CCCTTCAAAATATATAAATT+GGG + chr3.2:54587086-54587105 MS.gene03988:CDS 20.0%
!! GACTAAATGAATATTATTCT+TGG + chr3.2:54586531-54586550 MS.gene03988:intron 20.0%
!! TATTCTTGGATAAATGTAAT+AGG + chr3.2:54586545-54586564 MS.gene03988:intron 20.0%
!! TCAAAATATATAAATTGGGA+TGG + chr3.2:54587090-54587109 MS.gene03988:CDS 20.0%
!! TCTTATAAGTTAATAGCAAA+GGG + chr3.2:54587132-54587151 MS.gene03988:CDS 20.0%
!! TTTATGTAAATTAATGATGC+AGG + chr3.2:54586952-54586971 MS.gene03988:intron 20.0%
!!! AAAATACTTTAAGATCAACA+TGG - chr3.2:54587035-54587054 None:intergenic 20.0%
!!! AAATATATTATCTTAGCTTG+AGG - chr3.2:54586801-54586820 None:intergenic 20.0%
!!! AATATATTATCTTAGCTTGA+GGG - chr3.2:54586800-54586819 None:intergenic 20.0%
!!! AATGTTGTTTCAATTTCAAA+TGG + chr3.2:54585573-54585592 MS.gene03988:CDS 20.0%
!!! ATTTATATATTTTGAAGGGT+CGG - chr3.2:54587085-54587104 None:intergenic 20.0%
!!! CCCAATTTATATATTTTGAA+GGG - chr3.2:54587089-54587108 None:intergenic 20.0%
!!! TCCCAATTTATATATTTTGA+AGG - chr3.2:54587090-54587109 None:intergenic 20.0%
!!! TTAATTGAGCTTAGTTTTTA+TGG - chr3.2:54586505-54586524 None:intergenic 20.0%
! AAAATTACAACGCTAGAAAA+TGG + chr3.2:54585864-54585883 MS.gene03988:intron 25.0%
! AAATGTGATTAGTAAGAAGA+AGG + chr3.2:54586674-54586693 MS.gene03988:CDS 25.0%
! AAGTTGTTCATTGTAGTATT+CGG - chr3.2:54586745-54586764 None:intergenic 25.0%
! TTCATGTGTAAAAGCAAAAA+AGG + chr3.2:54586202-54586221 MS.gene03988:CDS 25.0%
! TTTATGTCTTAATGTCTCTA+TGG - chr3.2:54586775-54586794 None:intergenic 25.0%
!! CGACTGATTATAGATTTTAT+AGG + chr3.2:54585780-54585799 MS.gene03988:CDS 25.0%
!! TATTGAAAAGAGGAGTTTTA+AGG - chr3.2:54587188-54587207 None:intergenic 25.0%
!!! AAAAGTTGTGTTATTTCATG+AGG - chr3.2:54586278-54586297 None:intergenic 25.0%
!!! ATTGAAAAGAGGAGTTTTAA+GGG - chr3.2:54587187-54587206 None:intergenic 25.0%
!!! GTTGATCTTAAAGTATTTTG+TGG + chr3.2:54587036-54587055 MS.gene03988:CDS 25.0%
!!! TCTTAAAGTATTTTGTGGAA+CGG + chr3.2:54587041-54587060 MS.gene03988:CDS 25.0%
!!! TTTATATATTTTGAAGGGTC+GGG - chr3.2:54587084-54587103 None:intergenic 25.0%
!!! TTTTTGCTTTTACACATGAA+TGG - chr3.2:54586202-54586221 None:intergenic 25.0%
AGAATCACCAAAATTGAAGA+TGG - chr3.2:54585652-54585671 None:intergenic 30.0%
AGTGTAATAGATTCAACCAA+TGG - chr3.2:54586431-54586450 None:intergenic 30.0%
ATTAATCAAAGAAGGAGCAA+TGG + chr3.2:54586599-54586618 MS.gene03988:CDS 30.0%
ATTGATATAACATACGATGG+TGG - chr3.2:54586456-54586475 None:intergenic 30.0%
CTTCAGTCATTAATCAAAGA+AGG + chr3.2:54586591-54586610 MS.gene03988:intron 30.0%
TATCAAACACCACAACAATA+TGG + chr3.2:54586849-54586868 MS.gene03988:CDS 30.0%
TTGTTGACATTCATATATGC+CGG - chr3.2:54586028-54586047 None:intergenic 30.0%
! ATGGCAATGAGATTTTTGTT+CGG + chr3.2:54585592-54585611 MS.gene03988:CDS 30.0%
!! ACACAACTTTTGTTATGATG+TGG + chr3.2:54586287-54586306 MS.gene03988:intron 30.0%
!! ACTTTAAGATCAACATGGTA+TGG - chr3.2:54587030-54587049 None:intergenic 30.0%
!! CACAACTTTTGTTATGATGT+GGG + chr3.2:54586288-54586307 MS.gene03988:intron 30.0%
!! CTTAAAGTATTTTGTGGAAC+GGG + chr3.2:54587042-54587061 MS.gene03988:CDS 30.0%
!! TTATATATTTTGAAGGGTCG+GGG - chr3.2:54587083-54587102 None:intergenic 30.0%
!!! ACTCATTTTAATTGTAGCTG+AGG + chr3.2:54585982-54586001 MS.gene03988:intron 30.0%
!!! TGCAGGTTTTATTTCTGATA+AGG + chr3.2:54586969-54586988 MS.gene03988:intron 30.0%
AAATTGAAGATGGCTTCGTA+AGG - chr3.2:54585642-54585661 None:intergenic 35.0%
AAGAAAAGTTGTTCCACCAT+TGG + chr3.2:54586412-54586431 MS.gene03988:CDS 35.0%
AAGGAAGACTATGATGAACT+TGG + chr3.2:54586693-54586712 MS.gene03988:CDS 35.0%
AATGAATGATCTGTGGTGTT+TGG - chr3.2:54586145-54586164 None:intergenic 35.0%
ACTTACTTCAAACATCCATC+TGG + chr3.2:54585741-54585760 MS.gene03988:CDS 35.0%
AGGAAGACTATGATGAACTT+GGG + chr3.2:54586694-54586713 MS.gene03988:CDS 35.0%
ATGCCTGAAAATAGTCCTTA+TGG + chr3.2:54585714-54585733 MS.gene03988:CDS 35.0%
ATTCCTGGAAACTTTCCAAT+TGG + chr3.2:54586630-54586649 MS.gene03988:CDS 35.0%
GTAATAGATTCAACCAATGG+TGG - chr3.2:54586428-54586447 None:intergenic 35.0%
TAAGGGAAGGATTTGCAAAA+GGG - chr3.2:54587170-54587189 None:intergenic 35.0%
TCCAAAAAAACCACATGTGA+AGG - chr3.2:54585553-54585572 None:intergenic 35.0%
TTAAGGGAAGGATTTGCAAA+AGG - chr3.2:54587171-54587190 None:intergenic 35.0%
TTAATTGTAGCTGAGGCATA+CGG + chr3.2:54585989-54586008 MS.gene03988:intron 35.0%
TTCATATATGCCGGCAAAAA+TGG - chr3.2:54586019-54586038 None:intergenic 35.0%
TTCCTGGAAACTTTCCAATT+GGG + chr3.2:54586631-54586650 MS.gene03988:CDS 35.0%
! TACGAAGCCATCTTCAATTT+TGG + chr3.2:54585642-54585661 MS.gene03988:CDS 35.0%
! TGGCAATGAGATTTTTGTTC+GGG + chr3.2:54585593-54585612 MS.gene03988:CDS 35.0%
! TTGAAGTAAGTTGAGCCATA+AGG - chr3.2:54585732-54585751 None:intergenic 35.0%
! TTGTTTATAGTGGGAGAGAT+TGG + chr3.2:54586341-54586360 MS.gene03988:CDS 35.0%
!! ATACGGATTACCATTTTTGC+CGG + chr3.2:54586006-54586025 MS.gene03988:CDS 35.0%
!! ATTTTGAAAGCATGTTGTGG+AGG + chr3.2:54586997-54587016 MS.gene03988:CDS 35.0%
!! GAGATTTTGAAAGCATGTTG+TGG + chr3.2:54586994-54587013 MS.gene03988:CDS 35.0%
!! TAAGGACTATTTTCAGGCAT+AGG - chr3.2:54585714-54585733 None:intergenic 35.0%
!!! AAAAGAGGAGTTTTAAGGGA+AGG - chr3.2:54587183-54587202 None:intergenic 35.0%
!!! ACCTTCACATGTGGTTTTTT+TGG + chr3.2:54585549-54585568 MS.gene03988:CDS 35.0%
AAAACCACATGTGAAGGTGA+TGG - chr3.2:54585547-54585566 None:intergenic 40.0%
GGCTTCGTAAGGTAAAGAAT+TGG - chr3.2:54585631-54585650 None:intergenic 40.0%
GGTGATTCTATAAGTGACAC+CGG + chr3.2:54585663-54585682 MS.gene03988:CDS 40.0%
TTTCCAATTGGGTGTAATGC+TGG + chr3.2:54586642-54586661 MS.gene03988:CDS 40.0%
! GAGCCATAAGGACTATTTTC+AGG - chr3.2:54585720-54585739 None:intergenic 40.0%
! GGGGTAAATTTTGCATTTGC+AGG + chr3.2:54586070-54586089 MS.gene03988:CDS 40.0%
! TTATAGTGGGAGAGATTGGT+GGG + chr3.2:54586345-54586364 MS.gene03988:CDS 40.0%
! TTTATAGTGGGAGAGATTGG+TGG + chr3.2:54586344-54586363 MS.gene03988:CDS 40.0%
! TTTTCCATCACCTTCACATG+TGG + chr3.2:54585540-54585559 MS.gene03988:CDS 40.0%
!! ATAGCAAAGGGACTAGTTGA+AGG + chr3.2:54587144-54587163 MS.gene03988:CDS 40.0%
!! CGAAAGCATTGTAAGCTATC+AGG - chr3.2:54586722-54586741 None:intergenic 40.0%
AAAGCATGTTGTGGAGGAAG+TGG + chr3.2:54587003-54587022 MS.gene03988:CDS 45.0%
ACACCAGCATTACACCCAAT+TGG - chr3.2:54586648-54586667 None:intergenic 45.0%
ACTATTTATTTCGCCCGTCG+TGG + chr3.2:54586109-54586128 MS.gene03988:CDS 45.0%
AGCCAAGAAGACACGAAGAA+AGG + chr3.2:54586049-54586068 MS.gene03988:CDS 45.0%
CACACGCAATGAATGATCTG+TGG - chr3.2:54586152-54586171 None:intergenic 45.0%
CACCACAACAATATGGTGTG+TGG + chr3.2:54586856-54586875 MS.gene03988:intron 45.0%
CACCCAATTGGAAAGTTTCC+AGG - chr3.2:54586636-54586655 None:intergenic 45.0%
CCAAGAAGACACGAAGAAAG+GGG + chr3.2:54586051-54586070 MS.gene03988:CDS 45.0%
CCATCTGGACGTTTATCGAA+TGG + chr3.2:54585756-54585775 MS.gene03988:CDS 45.0%
CCATTCGATAAACGTCCAGA+TGG - chr3.2:54585759-54585778 None:intergenic 45.0%
CTCCACACACCATATTGTTG+TGG - chr3.2:54586861-54586880 None:intergenic 45.0%
GAATGATCTGTGGTGTTTGG+TGG - chr3.2:54586142-54586161 None:intergenic 45.0%
GCCAAGAAGACACGAAGAAA+GGG + chr3.2:54586050-54586069 MS.gene03988:CDS 45.0%
CATTGCGTGTGCAACTTGAG+TGG + chr3.2:54586161-54586180 MS.gene03988:CDS 50.0%
CCCCTTTCTTCGTGTCTTCT+TGG - chr3.2:54586054-54586073 None:intergenic 50.0%
GCAATGGAGCTAGTGATTCC+TGG + chr3.2:54586615-54586634 MS.gene03988:CDS 50.0%
GCTGAATGCAGCAGCATTTC+CGG - chr3.2:54585685-54585704 None:intergenic 50.0%
! TTGGTGGCATCATTCCACGA+CGG - chr3.2:54586126-54586145 None:intergenic 50.0%
TGGTGGCATCATTCCACGAC+GGG - chr3.2:54586125-54586144 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 54585519 54587215 54585519 ID=MS.gene03988
chr3.2 mRNA 54585519 54587215 54585519 ID=MS.gene03988.t1;Parent=MS.gene03988
chr3.2 exon 54585519 54585801 54585519 ID=MS.gene03988.t1.exon1;Parent=MS.gene03988.t1
chr3.2 CDS 54585519 54585801 54585519 ID=cds.MS.gene03988.t1;Parent=MS.gene03988.t1
chr3.2 exon 54585999 54586223 54585999 ID=MS.gene03988.t1.exon2;Parent=MS.gene03988.t1
chr3.2 CDS 54585999 54586223 54585999 ID=cds.MS.gene03988.t1;Parent=MS.gene03988.t1
chr3.2 exon 54586315 54586460 54586315 ID=MS.gene03988.t1.exon3;Parent=MS.gene03988.t1
chr3.2 CDS 54586315 54586460 54586315 ID=cds.MS.gene03988.t1;Parent=MS.gene03988.t1
chr3.2 exon 54586597 54586870 54586597 ID=MS.gene03988.t1.exon4;Parent=MS.gene03988.t1
chr3.2 CDS 54586597 54586870 54586597 ID=cds.MS.gene03988.t1;Parent=MS.gene03988.t1
chr3.2 exon 54586974 54587215 54586974 ID=MS.gene03988.t1.exon5;Parent=MS.gene03988.t1
chr3.2 CDS 54586974 54587215 54586974 ID=cds.MS.gene03988.t1;Parent=MS.gene03988.t1
Gene Sequence

>MS.gene03988

ATGGTGATGATATTCATTATCTTTTCCATCACCTTCACATGTGGTTTTTTTGGAAATGTTGTTTCAATTTCAAATGGCAATGAGATTTTTGTTCGGGATGAGACATATGCCAATTCTTTACCTTACGAAGCCATCTTCAATTTTGGTGATTCTATAAGTGACACCGGAAATGCTGCTGCATTCAGCGACAAACCTATGCCTGAAAATAGTCCTTATGGCTCAACTTACTTCAAACATCCATCTGGACGTTTATCGAATGGACGACTGATTATAGATTTTATAGGTAATTTTACTCTTCTTTTTTTAAGTTTGTTCAATAAGATTTTCTAATATGAAAGTAAAAAAAAAATTACAACGCTAGAAAATGGTATAACATGCTCTAGTTAATATAGTTTGTTAGAATCGTCAAAATTATTCAATCTTAAAGTCAATATATTTATGATTGAAAAATTTACAAGATTGTACTCATTTTAATTGTAGCTGAGGCATACGGATTACCATTTTTGCCGGCATATATGAATGTCAACAATAGCCAAGAAGACACGAAGAAAGGGGTAAATTTTGCATTTGCAGGTGCTAGTGCACTTAAAACTATTTATTTCGCCCGTCGTGGAATGATGCCACCAAACACCACAGATCATTCATTGCGTGTGCAACTTGAGTGGTTTAAGAAACTAAAGCCATTCATGTGTAAAAGCAAAAAAGGTTTCATTATAACTACCTACATATTTTGTTTGTTTTAAATATATAAATCTTCCTCATGAAATAACACAACTTTTGTTATGATGTGGGACAGAATGTACTAGCTACTTCAAAAAATCATTGTTTATAGTGGGAGAGATTGGTGGGAATGATGTTCTGCAGTATATCTCATCTAAAAAGTTTGCAGAAATAAGAAAAGTTGTTCCACCATTGGTTGAATCTATTACACTTACCACCATCGTATGTTATATCAATTTTAAGTACTTGAATGTCTTCTTTAACCATAAAAACTAAGCTCAATTAAAGATATGACTAAATGAATATTATTCTTGGATAAATGTAATAGGGATTTTTTTTTCTATTTTTTTATCTTCAGTCATTAATCAAAGAAGGAGCAATGGAGCTAGTGATTCCTGGAAACTTTCCAATTGGGTGTAATGCTGGTGTTTTGACAAATGTGATTAGTAAGAAGAAGGAAGACTATGATGAACTTGGGTGCCTGATAGCTTACAATGCTTTCGCCGAATACTACAATGAACAACTTAAAAATTCCATAGAGACATTAAGACATAAATACCCTCAAGCTAAGATAATATATTTTGACTACTACAACAATCTCAAACGTTTATATCAAACACCACAACAATATGGTGTGTGGAGTTACTATTATATTTTCTTGTTTATTTTTCCATAATTTATTTTTGTCAAATTCTTTTGAACATGTACGTCATTTTATGTAAATTAATGATGCAGGTTTTATTTCTGATAAGGACGAGATTTTGAAAGCATGTTGTGGAGGAAGTGGACCATACCATGTTGATCTTAAAGTATTTTGTGGAACGGGTAGCTCAACAGTTTGCCCCGACCCTTCAAAATATATAAATTGGGATGGCTCACACTTAACTGAAGCATCTTATAAGTTAATAGCAAAGGGACTAGTTGAAGGCCCTTTTGCAAATCCTTCCCTTAAAACTCCTCTTTTCAATATATCTTAG
Protein sequence

>MS.gene03988.t1

MVMIFIIFSITFTCGFFGNVVSISNGNEIFVRDETYANSLPYEAIFNFGDSISDTGNAAAFSDKPMPENSPYGSTYFKHPSGRLSNGRLIIDFIAEAYGLPFLPAYMNVNNSQEDTKKGVNFAFAGASALKTIYFARRGMMPPNTTDHSLRVQLEWFKKLKPFMCKSKKECTSYFKKSLFIVGEIGGNDVLQYISSKKFAEIRKVVPPLVESITLTTISLIKEGAMELVIPGNFPIGCNAGVLTNVISKKKEDYDELGCLIAYNAFAEYYNEQLKNSIETLRHKYPQAKIIYFDYYNNLKRLYQTPQQYGFISDKDEILKACCGGSGPYHVDLKVFCGTGSSTVCPDPSKYINWDGSHLTEASYKLIAKGLVEGPFANPSLKTPLFNIS