AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene043743

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene043743.t1 MTR_7g451440 98.455 453 7 0 1 453 1 453 0.0 931
MS.gene043743.t1 MTR_8g007500 74.172 302 69 3 161 453 157 458 4.07e-152 440
MS.gene043743.t1 MTR_4g099180 57.048 454 149 9 2 444 5 423 1.70e-148 429
MS.gene043743.t1 MTR_3g072650 60.385 260 81 4 167 417 153 399 4.35e-107 324
MS.gene043743.t1 MTR_5g058920 63.958 283 78 4 167 439 165 433 1.21e-106 323
MS.gene043743.t1 MTR_3g072650 61.181 237 70 4 167 394 153 376 1.81e-97 298
MS.gene043743.t1 MTR_4g099180 51.104 317 110 8 2 307 5 287 2.86e-88 272
MS.gene043743.t1 MTR_4g099180 50.473 317 112 7 2 307 5 287 4.36e-88 272
MS.gene043743.t1 MTR_8g080860 38.889 198 98 2 191 365 19 216 6.18e-34 129
MS.gene043743.t1 MTR_8g080860 34.225 187 123 0 188 374 62 248 2.72e-29 116
MS.gene043743.t1 MTR_8g080860 38.418 177 106 2 173 349 96 269 5.21e-28 112
MS.gene043743.t1 MTR_8g080860 33.553 152 78 1 238 366 20 171 4.90e-18 84.7
MS.gene043743.t1 MTR_8g080860 38.889 198 98 2 191 365 15 212 7.19e-34 129
MS.gene043743.t1 MTR_8g080860 34.225 187 123 0 188 374 58 244 3.28e-29 116
MS.gene043743.t1 MTR_8g080860 38.418 177 106 2 173 349 92 265 5.86e-28 112
MS.gene043743.t1 MTR_8g080860 33.553 152 78 1 238 366 16 167 5.17e-18 84.3
MS.gene043743.t1 MTR_8g088930 32.353 238 151 2 191 428 12 239 4.36e-32 130
MS.gene043743.t1 MTR_8g088930 34.266 143 91 1 226 368 4 143 1.69e-19 92.0
MS.gene043743.t1 MTR_8g088930 39.130 92 56 0 189 280 102 193 3.14e-14 75.5
MS.gene043743.t1 MTR_8g088930 32.353 238 151 2 191 428 12 239 4.41e-32 130
MS.gene043743.t1 MTR_8g088930 34.266 143 91 1 226 368 4 143 1.68e-19 92.0
MS.gene043743.t1 MTR_8g088930 39.130 92 56 0 189 280 102 193 3.12e-14 75.5
MS.gene043743.t1 MTR_8g088930 32.353 238 151 2 191 428 12 239 4.89e-32 129
MS.gene043743.t1 MTR_8g088930 34.266 143 91 1 226 368 4 143 3.00e-19 90.9
MS.gene043743.t1 MTR_8g088930 39.130 92 56 0 189 280 102 193 4.36e-14 75.1
MS.gene043743.t1 MTR_8g088930 32.353 238 151 2 191 428 12 239 5.15e-32 129
MS.gene043743.t1 MTR_8g088930 34.266 143 91 1 226 368 4 143 2.95e-19 90.9
MS.gene043743.t1 MTR_8g088930 39.130 92 56 0 189 280 102 193 4.33e-14 75.1
MS.gene043743.t1 MTR_8g092090 35.577 208 102 3 189 364 5 212 3.46e-28 112
MS.gene043743.t1 MTR_8g092090 38.889 162 97 1 177 338 73 232 4.01e-25 103
MS.gene043743.t1 MTR_8g092090 32.927 164 102 1 213 368 7 170 6.57e-16 77.4
MS.gene043743.t1 MTR_1g050740 33.161 193 125 1 189 381 58 246 2.94e-27 115
MS.gene043743.t1 MTR_1g050740 35.025 197 119 4 190 381 82 274 4.48e-22 99.8
MS.gene043743.t1 MTR_4g107460 30.864 243 136 4 193 411 33 267 3.46e-27 111
MS.gene043743.t1 MTR_4g107460 31.818 132 89 1 238 368 9 140 3.33e-14 73.9
MS.gene043743.t1 MTR_5g459450 35.928 167 107 0 189 355 66 232 1.75e-25 110
MS.gene043743.t1 MTR_5g459450 39.844 128 77 0 240 367 71 198 9.98e-22 99.0
MS.gene043743.t1 MTR_5g459450 36.449 107 68 0 262 368 70 176 1.23e-14 76.6
MS.gene043743.t1 MTR_8g039100 30.846 201 136 1 189 389 50 247 2.48e-25 109
MS.gene043743.t1 MTR_8g039100 28.649 185 123 1 184 359 59 243 5.50e-19 90.5
MS.gene043743.t1 MTR_8g095240 34.300 207 110 4 184 367 102 305 3.59e-25 107
MS.gene043743.t1 MTR_8g095240 31.557 244 108 6 181 367 41 282 2.27e-22 99.4
MS.gene043743.t1 MTR_8g095240 35.359 181 112 3 177 354 162 340 7.43e-21 94.7
MS.gene043743.t1 MTR_8g095240 33.149 181 111 1 196 366 8 188 8.62e-21 94.7
MS.gene043743.t1 MTR_8g095240 36.250 160 92 2 214 363 3 162 3.16e-15 77.8
MS.gene043743.t1 MTR_3g073100 32.995 197 131 1 193 388 58 254 7.79e-25 108
MS.gene043743.t1 MTR_3g097260 36.471 170 108 0 193 362 56 225 3.21e-24 106
MS.gene043743.t1 MTR_3g097260 35.938 128 82 0 193 320 102 229 9.71e-17 83.2
MS.gene043743.t1 MTR_3g097260 39.062 128 78 0 240 367 57 184 2.69e-15 79.0
MS.gene043743.t1 MTR_7g089950 31.737 167 114 0 189 355 68 234 4.80e-23 102
MS.gene043743.t1 MTR_7g089950 36.154 130 83 0 238 367 71 200 7.38e-20 93.2
MS.gene043743.t1 MTR_7g089950 35.484 124 73 1 252 368 55 178 2.10e-14 76.3
MS.gene043743.t1 MTR_7g089950 31.034 145 77 1 193 337 118 239 1.38e-12 70.5
MS.gene043743.t1 MTR_8g080310 38.519 135 83 0 234 368 6 140 1.21e-22 94.4
MS.gene043743.t1 MTR_8g080310 35.417 144 93 0 196 339 14 157 4.69e-20 87.0
MS.gene043743.t1 MTR_8g095170 35.404 161 103 1 193 352 31 191 1.71e-22 100
MS.gene043743.t1 MTR_8g095170 40.000 115 69 0 253 367 46 160 5.64e-19 90.1
MS.gene043743.t1 MTR_8g095170 36.111 108 68 1 262 368 31 138 4.07e-14 75.1
MS.gene043743.t1 MTR_8g095170 35.404 161 103 1 193 352 31 191 3.60e-22 99.8
MS.gene043743.t1 MTR_8g095170 40.000 115 69 0 253 367 46 160 1.03e-18 89.4
MS.gene043743.t1 MTR_8g095170 36.111 108 68 1 262 368 31 138 7.48e-14 73.9
MS.gene043743.t1 MTR_8g080340 41.176 119 70 0 231 349 35 153 1.09e-21 92.0
MS.gene043743.t1 MTR_8g080340 34.400 125 82 0 243 367 24 148 1.80e-17 80.1
MS.gene043743.t1 MTR_3g014650 27.823 248 158 4 193 440 90 316 4.11e-21 97.1
MS.gene043743.t1 MTR_3g014650 34.000 100 66 0 182 281 159 258 3.58e-11 65.9
MS.gene043743.t1 MTR_1g062740 32.258 186 123 1 193 378 52 234 6.46e-21 96.3
MS.gene043743.t1 MTR_1g062740 32.298 161 109 0 190 350 72 232 1.13e-20 95.5
MS.gene043743.t1 MTR_1g062740 33.871 124 59 1 182 305 133 233 1.98e-12 69.7
MS.gene043743.t1 MTR_6g043150 32.461 191 106 1 193 360 80 270 3.73e-18 85.5
MS.gene043743.t1 MTR_6g043150 35.754 179 113 2 188 365 6 183 8.37e-18 84.7
MS.gene043743.t1 MTR_6g043150 33.508 191 104 1 179 346 135 325 2.09e-15 77.4
MS.gene043743.t1 MTR_6g043150 32.331 133 90 0 234 366 6 138 1.16e-13 72.0
MS.gene043743.t1 MTR_5g010840 33.143 175 109 1 193 367 182 348 1.37e-17 84.7
MS.gene043743.t1 MTR_5g010840 29.612 206 107 3 193 360 113 318 1.98e-14 75.1
MS.gene043743.t1 MTR_5g010840 33.103 145 97 0 193 337 220 364 6.88e-12 67.4
MS.gene043743.t1 MTR_5g010840 35.644 101 65 0 193 293 266 366 3.27e-11 65.1
MS.gene043743.t1 MTR_2g078470 31.937 191 107 1 193 360 149 339 2.77e-17 83.6
MS.gene043743.t1 MTR_2g078470 32.000 175 119 0 193 367 80 254 4.65e-17 82.8
MS.gene043743.t1 MTR_2g078470 32.738 168 113 0 193 360 103 270 4.40e-15 77.0
MS.gene043743.t1 MTR_2g078470 32.203 177 120 0 189 365 7 183 1.08e-14 75.9
MS.gene043743.t1 MTR_2g078470 34.965 143 93 0 193 335 218 360 4.78e-14 73.9
MS.gene043743.t1 MTR_2g078470 28.643 199 119 1 193 368 34 232 5.08e-12 67.8
MS.gene043743.t1 MTR_2g078470 29.730 185 128 1 180 364 115 297 6.52e-11 64.3
MS.gene043743.t1 MTR_8g092410 28.426 197 117 3 230 424 148 322 9.61e-17 82.0
MS.gene043743.t1 MTR_8g092410 32.000 150 70 4 170 293 140 283 1.28e-11 66.2
MS.gene043743.t1 MTR_8g080350 22.523 333 190 7 97 372 23 344 7.35e-14 73.6
MS.gene043743.t1 MTR_3g023310 35.135 111 62 1 231 331 12 122 1.27e-13 69.3
MS.gene043743.t1 MTR_3g023310 36.893 103 55 1 276 368 11 113 1.66e-13 68.9
MS.gene043743.t1 MTR_1g112280 30.597 134 93 0 234 367 609 742 1.18e-12 70.5
MS.gene043743.t1 MTR_1g112280 32.000 125 85 0 218 342 616 740 5.32e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene043743.t1 AT4G17080 55.796 509 153 12 1 441 1 505 2.55e-168 483
MS.gene043743.t1 AT2G35170 52.236 492 166 9 1 441 1 474 4.61e-145 423
MS.gene043743.t1 AT1G21920 59.878 329 104 7 118 439 103 410 1.22e-113 340
MS.gene043743.t1 AT1G21920 61.111 270 87 6 118 380 103 361 1.29e-107 323
MS.gene043743.t1 AT1G77660 55.287 331 127 4 118 443 104 418 2.81e-106 322
MS.gene043743.t1 AT2G41210 34.921 189 119 1 189 377 67 251 7.23e-29 120
MS.gene043743.t1 AT2G41210 35.106 94 61 0 188 281 158 251 4.38e-11 65.9
MS.gene043743.t1 AT1G21980 37.059 170 107 0 193 362 77 246 2.71e-28 118
MS.gene043743.t1 AT1G21980 42.188 128 74 0 240 367 78 205 1.37e-23 104
MS.gene043743.t1 AT1G60890 35.556 180 116 0 189 368 20 199 9.34e-28 117
MS.gene043743.t1 AT1G60890 37.342 158 99 0 193 350 47 204 6.02e-27 114
MS.gene043743.t1 AT1G60890 32.867 143 88 2 168 305 66 205 2.10e-14 76.3
MS.gene043743.t1 AT1G60890 35.556 180 116 0 189 368 8 187 1.13e-27 117
MS.gene043743.t1 AT1G60890 37.342 158 99 0 193 350 35 192 7.82e-27 114
MS.gene043743.t1 AT1G60890 32.867 143 88 2 168 305 54 193 2.26e-14 75.9
MS.gene043743.t1 AT1G10900 37.079 178 112 0 191 368 10 187 1.49e-27 116
MS.gene043743.t1 AT1G10900 36.875 160 101 0 191 350 33 192 2.87e-26 112
MS.gene043743.t1 AT1G10900 30.370 135 94 0 233 367 6 140 4.58e-15 78.2
MS.gene043743.t1 AT1G10900 33.566 143 87 2 168 305 54 193 6.05e-14 74.7
MS.gene043743.t1 AT1G10900 37.079 178 112 0 191 368 10 187 1.49e-27 116
MS.gene043743.t1 AT1G10900 36.875 160 101 0 191 350 33 192 2.87e-26 112
MS.gene043743.t1 AT1G10900 30.370 135 94 0 233 367 6 140 4.58e-15 78.2
MS.gene043743.t1 AT1G10900 33.566 143 87 2 168 305 54 193 6.05e-14 74.7
MS.gene043743.t1 AT1G10900 37.079 178 112 0 191 368 10 187 1.49e-27 116
MS.gene043743.t1 AT1G10900 36.875 160 101 0 191 350 33 192 2.87e-26 112
MS.gene043743.t1 AT1G10900 30.370 135 94 0 233 367 6 140 4.58e-15 78.2
MS.gene043743.t1 AT1G10900 33.566 143 87 2 168 305 54 193 6.05e-14 74.7
MS.gene043743.t1 AT3G56960 32.275 189 124 1 189 377 69 253 2.56e-27 115
MS.gene043743.t1 AT3G56960 32.275 189 124 1 189 377 69 253 2.56e-27 115
MS.gene043743.t1 AT1G77740 33.023 215 121 3 152 362 52 247 9.02e-26 111
MS.gene043743.t1 AT1G77740 39.844 128 77 0 240 367 79 206 5.63e-21 96.7
MS.gene043743.t1 AT1G77740 33.023 215 121 3 152 362 52 247 9.02e-26 111
MS.gene043743.t1 AT1G77740 39.844 128 77 0 240 367 79 206 5.63e-21 96.7
MS.gene043743.t1 AT3G07960 32.275 189 124 1 189 377 24 208 5.59e-25 108
MS.gene043743.t1 AT3G07960 32.275 189 124 1 189 377 24 208 6.17e-25 108
MS.gene043743.t1 AT3G07960 32.275 189 124 1 189 377 24 208 6.17e-25 108
MS.gene043743.t1 AT3G07960 32.275 189 124 1 189 377 24 208 8.76e-25 107
MS.gene043743.t1 AT2G26420 34.483 174 114 0 189 362 50 223 1.56e-24 107
MS.gene043743.t1 AT2G26420 37.500 128 80 0 240 367 55 182 4.12e-19 90.9
MS.gene043743.t1 AT2G26420 35.849 106 68 0 263 368 55 160 1.86e-12 70.1
MS.gene043743.t1 AT2G26420 34.483 174 114 0 189 362 50 223 1.56e-24 107
MS.gene043743.t1 AT2G26420 37.500 128 80 0 240 367 55 182 4.12e-19 90.9
MS.gene043743.t1 AT2G26420 35.849 106 68 0 263 368 55 160 1.86e-12 70.1
MS.gene043743.t1 AT2G26420 34.483 174 114 0 189 362 50 223 1.98e-24 107
MS.gene043743.t1 AT2G26420 37.500 128 80 0 240 367 55 182 4.98e-19 90.5
MS.gene043743.t1 AT2G26420 35.514 107 69 0 262 368 54 160 2.10e-12 69.7
MS.gene043743.t1 AT3G09920 31.844 179 122 0 190 368 51 229 1.01e-21 99.0
MS.gene043743.t1 AT3G09920 32.919 161 108 0 190 350 74 234 2.99e-21 97.4
MS.gene043743.t1 AT3G09920 25.869 259 163 4 183 425 115 360 1.79e-15 79.3
MS.gene043743.t1 AT3G09920 38.776 98 60 0 182 279 135 232 2.16e-13 73.2
MS.gene043743.t1 AT3G09920 34.259 108 71 0 263 370 55 162 3.16e-12 69.3
MS.gene043743.t1 AT3G09920 31.844 179 122 0 190 368 51 229 1.01e-21 99.0
MS.gene043743.t1 AT3G09920 32.919 161 108 0 190 350 74 234 2.99e-21 97.4
MS.gene043743.t1 AT3G09920 25.869 259 163 4 183 425 115 360 1.79e-15 79.3
MS.gene043743.t1 AT3G09920 38.776 98 60 0 182 279 135 232 2.16e-13 73.2
MS.gene043743.t1 AT3G09920 34.259 108 71 0 263 370 55 162 3.16e-12 69.3
MS.gene043743.t1 AT3G09920 31.844 179 122 0 190 368 51 229 1.01e-21 99.0
MS.gene043743.t1 AT3G09920 32.919 161 108 0 190 350 74 234 2.99e-21 97.4
MS.gene043743.t1 AT3G09920 25.869 259 163 4 183 425 115 360 1.79e-15 79.3
MS.gene043743.t1 AT3G09920 38.776 98 60 0 182 279 135 232 2.16e-13 73.2
MS.gene043743.t1 AT3G09920 34.259 108 71 0 263 370 55 162 3.16e-12 69.3
MS.gene043743.t1 AT3G09920 31.844 179 122 0 190 368 51 229 1.01e-21 99.0
MS.gene043743.t1 AT3G09920 32.919 161 108 0 190 350 74 234 2.99e-21 97.4
MS.gene043743.t1 AT3G09920 25.869 259 163 4 183 425 115 360 1.79e-15 79.3
MS.gene043743.t1 AT3G09920 38.776 98 60 0 182 279 135 232 2.16e-13 73.2
MS.gene043743.t1 AT3G09920 34.259 108 71 0 263 370 55 162 3.16e-12 69.3

Find 159 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTTGGTCATTATCATTTC+AGG 0.156400 7.4:+53261242 MS.gene043743:CDS
GATATGTTGGAGAGTTTAAA+TGG 0.174453 7.4:+53261206 MS.gene043743:CDS
AACGGCTTGGGTCGGGGTGC+TGG 0.212270 7.4:+53260882 MS.gene043743:CDS
CTCTACCTTGCTCACATTAT+AGG 0.225329 7.4:-53264103 None:intergenic
CGGACAGGATGCATGGATTT+GGG 0.251705 7.4:+53262893 MS.gene043743:CDS
TAATGTTACATAACAGGAAT+TGG 0.257542 7.4:-53264240 None:intergenic
GGGTGCTGGGTCCAGGTGTT+TGG 0.258370 7.4:+53260896 MS.gene043743:CDS
TTTCATAAGGGGAAGTGTTC+AGG 0.266874 7.4:+53260944 MS.gene043743:CDS
TTGAATGGCGGTTTGTTAGA+AGG 0.293010 7.4:-53260515 None:intergenic
GCGGACAGGATGCATGGATT+TGG 0.295803 7.4:+53262892 MS.gene043743:CDS
GGGTCCAGGTGTTTGGGAAC+GGG 0.301613 7.4:+53260903 MS.gene043743:CDS
CCCAAGCCGTTTCTCTGACT+TGG 0.321660 7.4:-53260870 None:intergenic
GGTGCTGGGTCCAGGTGTTT+GGG 0.332506 7.4:+53260897 MS.gene043743:CDS
TGTTGATAGTTGTGTTGAAT+TGG 0.334066 7.4:-53260419 None:intergenic
TGGGTCGGGGTGCTGGGTCC+AGG 0.356913 7.4:+53260889 MS.gene043743:CDS
GCGAAAGGCGGTTGCGGCGG+AGG 0.362187 7.4:-53260579 None:intergenic
ACGGCTTGGGTCGGGGTGCT+GGG 0.364059 7.4:+53260883 MS.gene043743:CDS
TATGAAGGGGATTGGATTGA+TGG 0.367229 7.4:+53261001 MS.gene043743:CDS
TGGGAACGGGGACGTTTATG+AGG 0.368585 7.4:+53260916 MS.gene043743:CDS
TTGCCTTCTTCCTTCATGCC+AGG 0.377344 7.4:-53262953 None:intergenic
TTGACACCAACAGGAGAAAC+AGG 0.378310 7.4:-53263072 None:intergenic
TCAGAGAAACGGCTTGGGTC+GGG 0.392642 7.4:+53260875 MS.gene043743:CDS
ACTTTGCCAATGACCGGATT+GGG 0.396645 7.4:-53263010 None:intergenic
TGTGTTGAATTGGTGGTGTT+GGG 0.397722 7.4:-53260409 None:intergenic
CACTTTGCCAATGACCGGAT+TGG 0.398582 7.4:-53263011 None:intergenic
TATACGGGCGATGTTTATAC+TGG 0.398711 7.4:+53261124 MS.gene043743:CDS
TGGATTGATGGAAGGTATGA+TGG 0.401616 7.4:+53261013 MS.gene043743:CDS
AGTTAATAATGTTACATAAC+AGG 0.406029 7.4:-53264246 None:intergenic
TTGGAATGATTGACACCAAC+AGG 0.407683 7.4:-53263081 None:intergenic
ATATGTTGGAGAGTTTAAAT+GGG 0.415378 7.4:+53261207 MS.gene043743:CDS
GACGGGAGATGATTTCTGTT+GGG 0.417751 7.4:-53260493 None:intergenic
TTGTGTTGAATTGGTGGTGT+TGG 0.419614 7.4:-53260410 None:intergenic
TGGTGGTGTTGGGTTGAAAT+CGG 0.421657 7.4:-53260399 None:intergenic
AGTATGAGTGGGAGGTATGA+AGG 0.423912 7.4:+53260986 MS.gene043743:CDS
TGGGTCCAGGTGTTTGGGAA+CGG 0.427306 7.4:+53260902 MS.gene043743:CDS
GTGAAACCCAATCCGGTCAT+TGG 0.435711 7.4:+53263004 MS.gene043743:CDS
GCCGTTTCTCTGACTTGGGT+CGG 0.436839 7.4:-53260865 None:intergenic
ACTTACCCTGTTTCTCCTGT+TGG 0.439074 7.4:+53263066 MS.gene043743:CDS
ATTCAAACCGCCGCAAAATA+CGG 0.445600 7.4:+53260532 MS.gene043743:CDS
CAGAAAACGGGAAGAGGAGG+GGG 0.447250 7.4:-53260830 None:intergenic
GACATGGGTTCGGTGTTTAT+AGG 0.447741 7.4:+53261098 MS.gene043743:CDS
GATCCTATGGTCCAGAAAAC+GGG 0.449541 7.4:-53260842 None:intergenic
CCGTTTCTCTGACTTGGGTC+GGG 0.449859 7.4:-53260864 None:intergenic
CCAAGCCGTTTCTCTGACTT+GGG 0.451503 7.4:-53260869 None:intergenic
AATGTTACATAACAGGAATT+GGG 0.454010 7.4:-53264239 None:intergenic
CACTCCACTTTGCCAATGAC+CGG 0.455041 7.4:-53263016 None:intergenic
GGAATGTATACATTTAGAAA+TGG 0.456543 7.4:+53262982 MS.gene043743:CDS
GAAGGAAGAAGGCAAGGGCT+TGG 0.464196 7.4:+53262961 MS.gene043743:CDS
GGATCCTATGGTCCAGAAAA+CGG 0.466555 7.4:-53260843 None:intergenic
TTCATAAGGGGAAGTGTTCA+GGG 0.475265 7.4:+53260945 MS.gene043743:CDS
TGGCGGTTTGTTAGAAGGAC+GGG 0.475546 7.4:-53260510 None:intergenic
GCAAATGGCCATCGATATGA+AGG 0.477506 7.4:+53262928 MS.gene043743:CDS
TGTGATGCATCAGAAGAAAT+CGG 0.477652 7.4:+53260340 None:intergenic
TGGGGTGTTAAACATGGTCT+TGG 0.481307 7.4:+53261226 MS.gene043743:CDS
AAAGGCGGTTGCGGCGGAGG+CGG 0.483374 7.4:-53260576 None:intergenic
TGATAGTTGTGTTGAATTGG+TGG 0.485327 7.4:-53260416 None:intergenic
CAGAGAAACGGCTTGGGTCG+GGG 0.485424 7.4:+53260876 MS.gene043743:CDS
GTATGAGTGGGAGGTATGAA+GGG 0.485904 7.4:+53260987 MS.gene043743:CDS
AACGTGAAGCGTGGAGGTAA+AGG 0.489527 7.4:-53260661 None:intergenic
GCAAGGGGAAGTCGTTATAG+AGG 0.490670 7.4:+53261055 MS.gene043743:CDS
TGACTTGGGTCGGGATCCTA+TGG 0.491592 7.4:-53260855 None:intergenic
AGGCGGAGAGGGTGAGATGA+TGG 0.492013 7.4:-53260559 None:intergenic
GGTTGCGGCGGAGGCGGAGA+GGG 0.493838 7.4:-53260570 None:intergenic
GATGATGCGAAAGGCGGTTG+CGG 0.493893 7.4:-53260585 None:intergenic
CATCATCATGTCAACAATGA+AGG 0.496231 7.4:+53264213 MS.gene043743:CDS
GGTCCAGGTGTTTGGGAACG+GGG 0.496544 7.4:+53260904 MS.gene043743:CDS
CCCAAGTCAGAGAAACGGCT+TGG 0.496625 7.4:+53260869 MS.gene043743:CDS
TAAGTGGTGTTCTGTGTGCT+TGG 0.500013 7.4:-53263048 None:intergenic
AGCAGCTACTCTAGCTGCAT+TGG 0.500850 7.4:-53264166 None:intergenic
GTGGGAGGTATGAAGGGGAT+TGG 0.501247 7.4:+53260993 MS.gene043743:CDS
GGTCCAATGGTCAGAGTCAT+GGG 0.501698 7.4:+53261152 MS.gene043743:CDS
CGGTTGCGGCGGAGGCGGAG+AGG 0.502705 7.4:-53260571 None:intergenic
TGGTCCAATGGTCAGAGTCA+TGG 0.503456 7.4:+53261151 MS.gene043743:CDS
GGACGGGAGATGATTTCTGT+TGG 0.506589 7.4:-53260494 None:intergenic
CCAAGTCAGAGAAACGGCTT+GGG 0.507033 7.4:+53260870 MS.gene043743:CDS
GGTGTTCATACTTGTGAAGA+TGG 0.512847 7.4:+53261178 MS.gene043743:CDS
AGAGGAAAGGAACGTAGAGA+AGG 0.514237 7.4:-53260755 None:intergenic
TTATGCAAATTAAGATGAAG+AGG 0.517018 7.4:-53260773 None:intergenic
AACGGTGCTTCTTGAGGCGG+CGG 0.518353 7.4:-53260607 None:intergenic
AAGAAATCGGAGGTCCAAAT+CGG 0.520803 7.4:+53260353 MS.gene043743:CDS
GAAGATGGGAGTAGATATGT+TGG 0.521162 7.4:+53261193 MS.gene043743:CDS
ATGGGTATGGTGTGGAGACA+TGG 0.522302 7.4:+53261032 MS.gene043743:CDS
TTTATTATTATAGTATGAGT+GGG 0.526460 7.4:+53260975 MS.gene043743:CDS
AAGGGGAAGTGTTCAGGGAG+TGG 0.526679 7.4:+53260950 MS.gene043743:CDS
ATGGTCCAGAAAACGGGAAG+AGG 0.531106 7.4:-53260836 None:intergenic
CTATAATGTGAGCAAGGTAG+AGG 0.534154 7.4:+53264104 MS.gene043743:CDS
GCCATCGATATGAAGGAGCC+TGG 0.534303 7.4:+53262935 MS.gene043743:CDS
GTCCAGAAAACGGGAAGAGG+AGG 0.534451 7.4:-53260833 None:intergenic
CTGCACGGCAGTGAGTACTT+TGG 0.536167 7.4:-53263100 None:intergenic
ACACCCATGACTCTGACCAT+TGG 0.536241 7.4:-53261155 None:intergenic
AGAAATGGTGAAACCCAATC+CGG 0.536711 7.4:+53262997 MS.gene043743:CDS
AACAGGAGAAACAGGGTAAG+TGG 0.537619 7.4:-53263064 None:intergenic
GGAACGGGGACGTTTATGAG+GGG 0.541742 7.4:+53260918 MS.gene043743:CDS
TACTTCGCGGACAGGATGCA+TGG 0.542401 7.4:+53262886 MS.gene043743:CDS
CCAGAAAACGGGAAGAGGAG+GGG 0.543598 7.4:-53260831 None:intergenic
GTCAGAGAAACGGCTTGGGT+CGG 0.543937 7.4:+53260874 MS.gene043743:CDS
AAGGGGATTGGATTGATGGA+AGG 0.545299 7.4:+53261005 MS.gene043743:CDS
ACGGGAGATGATTTCTGTTG+GGG 0.547109 7.4:-53260492 None:intergenic
CGTCCCCGTTCCCAAACACC+TGG 0.547258 7.4:-53260907 None:intergenic
GATGGAAGGTATGATGGGTA+TGG 0.548362 7.4:+53261019 MS.gene043743:CDS
GATGCGAAAGGCGGTTGCGG+CGG 0.551687 7.4:-53260582 None:intergenic
CCCGACCCAAGTCAGAGAAA+CGG 0.553289 7.4:+53260864 MS.gene043743:CDS
GAAAGCCTATAATGTGAGCA+AGG 0.553781 7.4:+53264098 MS.gene043743:CDS
GGGAACGGGGACGTTTATGA+GGG 0.554543 7.4:+53260917 MS.gene043743:CDS
TGGAGGTAAAGGTAGAGAAG+AGG 0.555304 7.4:-53260650 None:intergenic
GTTTATTATTATAGTATGAG+TGG 0.555614 7.4:+53260974 MS.gene043743:CDS
CAAAGTACTCACTGCCGTGC+AGG 0.556677 7.4:+53263101 MS.gene043743:CDS
GCCAGGCTCCTTCATATCGA+TGG 0.556856 7.4:-53262936 None:intergenic
TTCTGTTGGGGAGATGTCGA+TGG 0.558902 7.4:-53260480 None:intergenic
TGGTGTGGAGACATGGGCAA+GGG 0.559248 7.4:+53261039 MS.gene043743:CDS
CAAGGATTGAGACATGGGTT+CGG 0.560275 7.4:+53261088 MS.gene043743:CDS
GAACGGGGACGTTTATGAGG+GGG 0.562733 7.4:+53260919 MS.gene043743:CDS
ATGGTGTGGAGACATGGGCA+AGG 0.570407 7.4:+53261038 MS.gene043743:CDS
TGGCATGAAGGAAGAAGGCA+AGG 0.570472 7.4:+53262955 MS.gene043743:CDS
TCGTGAATGAGACGACGAAG+AGG 0.575039 7.4:-53260804 None:intergenic
GAGCCTGGCATGAAGGAAGA+AGG 0.578621 7.4:+53262950 MS.gene043743:CDS
TCCAGAAAACGGGAAGAGGA+GGG 0.579196 7.4:-53260832 None:intergenic
GAACGGAACGGTGCTTCTTG+AGG 0.580795 7.4:-53260613 None:intergenic
ATGGCGGTTTGTTAGAAGGA+CGG 0.581943 7.4:-53260511 None:intergenic
GCGATGTTTATACTGGAGAA+TGG 0.582682 7.4:+53261131 MS.gene043743:CDS
GGTGTGGAGACATGGGCAAG+GGG 0.583975 7.4:+53261040 MS.gene043743:CDS
TATGAAGGAGCCTGGCATGA+AGG 0.585181 7.4:+53262943 MS.gene043743:CDS
CAATCCGGTCATTGGCAAAG+TGG 0.587912 7.4:+53263012 MS.gene043743:CDS
AGGAAGAGAGATTAGAAGAA+CGG 0.590138 7.4:-53260630 None:intergenic
GGATTGATGGAAGGTATGAT+GGG 0.593042 7.4:+53261014 MS.gene043743:CDS
ATTATTATAGTATGAGTGGG+AGG 0.595261 7.4:+53260978 MS.gene043743:CDS
TTTAAATGGGGTGTTAAACA+TGG 0.596268 7.4:+53261220 MS.gene043743:CDS
GGAGAGGGTGAGATGATGGA+AGG 0.596326 7.4:-53260555 None:intergenic
CAAATTAAGATGAAGAGGAA+AGG 0.597404 7.4:-53260768 None:intergenic
ATCGACAAGGATTGAGACAT+GGG 0.600839 7.4:+53261083 MS.gene043743:CDS
CAAGGGGAAGTCGTTATAGA+GGG 0.603062 7.4:+53261056 MS.gene043743:CDS
TATGAGTGGGAGGTATGAAG+GGG 0.610885 7.4:+53260988 MS.gene043743:CDS
TATACTGGAGAATGGTCCAA+TGG 0.615740 7.4:+53261139 MS.gene043743:CDS
GAGGCGGCGGATGATGCGAA+AGG 0.619065 7.4:-53260594 None:intergenic
GTGTTCATACTTGTGAAGAT+GGG 0.621991 7.4:+53261179 MS.gene043743:CDS
TATGTTGGAGAGTTTAAATG+GGG 0.623779 7.4:+53261208 MS.gene043743:CDS
AATGGTCAGAGTCATGGGTG+TGG 0.624619 7.4:+53261157 MS.gene043743:CDS
ACAGAGGTGTTGACGCTGAG+AGG 0.628131 7.4:-53260444 None:intergenic
GAAAGAAAGAACGTGAAGCG+TGG 0.634212 7.4:-53260670 None:intergenic
CGGAACGGTGCTTCTTGAGG+CGG 0.636259 7.4:-53260610 None:intergenic
TATCGACAAGGATTGAGACA+TGG 0.637583 7.4:+53261082 MS.gene043743:CDS
TGGGTATGGTGTGGAGACAT+GGG 0.644842 7.4:+53261033 MS.gene043743:CDS
GGACAGGATGCATGGATTTG+GGG 0.647772 7.4:+53262894 MS.gene043743:CDS
AAGGTATGATGGGTATGGTG+TGG 0.652282 7.4:+53261024 MS.gene043743:CDS
CAAATCGGAAAAGAAAGCGT+AGG 0.654836 7.4:+53260368 MS.gene043743:CDS
GCGGCGGATGATGCGAAAGG+CGG 0.657401 7.4:-53260591 None:intergenic
ACACAAAGAATGTACCTGCA+CGG 0.663164 7.4:-53263115 None:intergenic
ATGTCGATGGAGTGATGACG+TGG 0.669848 7.4:-53260467 None:intergenic
AGAAAGAACGTGAAGCGTGG+AGG 0.679285 7.4:-53260667 None:intergenic
AGAAACGGAGACACATACGC+GGG 0.687462 7.4:+53262859 MS.gene043743:intron
CAGAAACGGAGACACATACG+CGG 0.695111 7.4:+53262858 MS.gene043743:intron
TGGAGTGATGACGTGGACAG+AGG 0.696682 7.4:-53260460 None:intergenic
GAAACGGAGACACATACGCG+GGG 0.706021 7.4:+53262860 MS.gene043743:intron
TATAGAGGGCAATATCGACA+AGG 0.708209 7.4:+53261070 MS.gene043743:CDS
GGCATGAAGGAAGAAGGCAA+GGG 0.710195 7.4:+53262956 MS.gene043743:CDS
TGACACCAACAGGAGAAACA+GGG 0.715184 7.4:-53263071 None:intergenic
GAGAGATTAGAAGAACGGAA+CGG 0.719314 7.4:-53260625 None:intergenic
GATGCATCAGAAGAAATCGG+AGG 0.750982 7.4:+53260343 None:intergenic
AAACGGAGACACATACGCGG+GGG 0.752404 7.4:+53262861 MS.gene043743:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATAATGAAAAATGAAA+GGG - chr7.4:53263874-53263893 None:intergenic 10.0%
!!! ACTTTTTATTCAAAAAATAT+CGG - chr7.4:53262022-53262041 None:intergenic 10.0%
!! CATTAATAATGAAAAATGAA+AGG - chr7.4:53263875-53263894 None:intergenic 15.0%
!! TTTATTATTATAGTATGAGT+GGG + chr7.4:53260975-53260994 MS.gene043743:CDS 15.0%
!!! ATTATTAGGGTTTTAAATAA+AGG + chr7.4:53261521-53261540 MS.gene043743:intron 15.0%
!!! ATTCCAGTTTTTAAAATTTA+TGG + chr7.4:53261685-53261704 MS.gene043743:intron 15.0%
!! AATGAAAGGGTTTAAATAAT+TGG + chr7.4:53262679-53262698 MS.gene043743:intron 20.0%
!! AGAAGAAAAATAGAAATGAA+AGG + chr7.4:53262665-53262684 MS.gene043743:intron 20.0%
!! ATAACATTTAACAAGAACAA+AGG - chr7.4:53263152-53263171 None:intergenic 20.0%
!! GAAGAAAAATAGAAATGAAA+GGG + chr7.4:53262666-53262685 MS.gene043743:intron 20.0%
!! GTTTATTATTATAGTATGAG+TGG + chr7.4:53260974-53260993 MS.gene043743:CDS 20.0%
!! TAACATTTAACAAGAACAAA+GGG - chr7.4:53263151-53263170 None:intergenic 20.0%
!! TATTTATTTGTTTCGCAAAT+AGG + chr7.4:53264056-53264075 MS.gene043743:intron 20.0%
!! TCAAATAACAATTGTGTTAA+AGG - chr7.4:53261796-53261815 None:intergenic 20.0%
!! TGTATTTATATCTAAGCTTA+GGG + chr7.4:53263596-53263615 MS.gene043743:intron 20.0%
!! TTCAGATGTTATGTATAAAT+AGG + chr7.4:53263916-53263935 MS.gene043743:intron 20.0%
!! TTGTATTTATATCTAAGCTT+AGG + chr7.4:53263595-53263614 MS.gene043743:intron 20.0%
!!! AAACAATCAAAATGAGTTTT+TGG + chr7.4:53262706-53262725 MS.gene043743:intron 20.0%
!!! TAACATACACCATTTTATAT+GGG - chr7.4:53262621-53262640 None:intergenic 20.0%
! AAACAACAATATCACAATTC+AGG - chr7.4:53261821-53261840 None:intergenic 25.0%
! AATTAGCACAATATTGTAAG+AGG + chr7.4:53263660-53263679 MS.gene043743:intron 25.0%
! ATAAAATGGTGTATGTTAGA+TGG + chr7.4:53262623-53262642 MS.gene043743:intron 25.0%
! ATAAACTATTCCAAACCTAA+TGG + chr7.4:53263962-53263981 MS.gene043743:intron 25.0%
! ATATGTTGGAGAGTTTAAAT+GGG + chr7.4:53261207-53261226 MS.gene043743:CDS 25.0%
! ATCTTATGCTTAATCAGAAA+CGG + chr7.4:53262844-53262863 MS.gene043743:intron 25.0%
! ATGAAAAACCCAACATATTA+AGG - chr7.4:53262814-53262833 None:intergenic 25.0%
! ATTTAATAAGTGGAGTGATA+AGG - chr7.4:53263811-53263830 None:intergenic 25.0%
! CAACACAAGAATTAAACAAA+GGG - chr7.4:53261290-53261309 None:intergenic 25.0%
! GAAAGGGAATTAAGTTAATA+AGG - chr7.4:53263858-53263877 None:intergenic 25.0%
! GAAGAATATAACTACTGAAA+TGG + chr7.4:53261984-53262003 MS.gene043743:intron 25.0%
! GGAATGTATACATTTAGAAA+TGG + chr7.4:53262982-53263001 MS.gene043743:CDS 25.0%
! TAAACTATTCCAAACCTAAT+GGG + chr7.4:53263963-53263982 MS.gene043743:intron 25.0%
! TTATGCAAATTAAGATGAAG+AGG - chr7.4:53260776-53260795 None:intergenic 25.0%
! TTATTTGTAATAACTGTCCT+CGG - chr7.4:53264002-53264021 None:intergenic 25.0%
! TTCATAGGTTGTGATTATTA+GGG + chr7.4:53261508-53261527 MS.gene043743:intron 25.0%
!! CAAATCCTTTTAGTCAATAT+AGG + chr7.4:53262348-53262367 MS.gene043743:intron 25.0%
!! CTAACATACACCATTTTATA+TGG - chr7.4:53262622-53262641 None:intergenic 25.0%
!! GACATGCTAATATTTTATTG+AGG + chr7.4:53263763-53263782 MS.gene043743:intron 25.0%
!! GCTAATATTTTATTGAGGAT+TGG + chr7.4:53263768-53263787 MS.gene043743:intron 25.0%
!!! AGTTTTTGGTTTTGAAATAG+TGG + chr7.4:53262720-53262739 MS.gene043743:intron 25.0%
!!! ATGACTTTTTTTCTCTCTTA+TGG + chr7.4:53262290-53262309 MS.gene043743:intron 25.0%
!!! ATTGTGATATTGTTGTTTTG+AGG + chr7.4:53261823-53261842 MS.gene043743:intron 25.0%
!!! CAGCCATAAATTTTAAAAAC+TGG - chr7.4:53261691-53261710 None:intergenic 25.0%
!!! CAGTTTTTAAAATTTATGGC+TGG + chr7.4:53261689-53261708 MS.gene043743:intron 25.0%
AAAGGATTTGAACAGACAAA+TGG - chr7.4:53262338-53262357 None:intergenic 30.0%
AACGCAAAAATCTACCATAT+TGG - chr7.4:53261908-53261927 None:intergenic 30.0%
AAGAGAGCTTGTCAATTATA+TGG + chr7.4:53262394-53262413 MS.gene043743:intron 30.0%
ACATATTAAGGCAAAGAGAA+AGG - chr7.4:53262802-53262821 None:intergenic 30.0%
ATTATTATAGTATGAGTGGG+AGG + chr7.4:53260978-53260997 MS.gene043743:CDS 30.0%
CAAATTAAGATGAAGAGGAA+AGG - chr7.4:53260771-53260790 None:intergenic 30.0%
CAATAAGAGATAGCCAAAAA+CGG - chr7.4:53263381-53263400 None:intergenic 30.0%
CACACAGACACTTTAAATTT+AGG + chr7.4:53261625-53261644 MS.gene043743:intron 30.0%
CATCAAAAACCATTATGTCA+CGG - chr7.4:53261566-53261585 None:intergenic 30.0%
CTCCCTCAAACTAAAATAAT+GGG - chr7.4:53263448-53263467 None:intergenic 30.0%
CTTCATAGGTTGTGATTATT+AGG + chr7.4:53261507-53261526 MS.gene043743:intron 30.0%
CTTGATATCGTAGGAAATTA+CGG - chr7.4:53261765-53261784 None:intergenic 30.0%
GAAAGGGTTTAAATAATTGG+AGG + chr7.4:53262682-53262701 MS.gene043743:intron 30.0%
GACAACTATATTATACCACT+AGG + chr7.4:53262138-53262157 MS.gene043743:intron 30.0%
GATATGTTGGAGAGTTTAAA+TGG + chr7.4:53261206-53261225 MS.gene043743:CDS 30.0%
GCAACACAAGAATTAAACAA+AGG - chr7.4:53261291-53261310 None:intergenic 30.0%
GTTTATTAAGGATTGAGAGT+AGG + chr7.4:53261953-53261972 MS.gene043743:intron 30.0%
TATGTTGGAGAGTTTAAATG+GGG + chr7.4:53261208-53261227 MS.gene043743:CDS 30.0%
TCAAGAGAAACATATGCTTA+CGG - chr7.4:53263509-53263528 None:intergenic 30.0%
TCGGATGAATTTGTCAATAT+CGG + chr7.4:53263262-53263281 MS.gene043743:intron 30.0%
TCTCAAATTATTATCCGTGT+CGG - chr7.4:53261386-53261405 None:intergenic 30.0%
TCTCTTTGCCTTAATATGTT+GGG + chr7.4:53262803-53262822 MS.gene043743:intron 30.0%
TGGATTTGAATCTTCCAATA+TGG + chr7.4:53261891-53261910 MS.gene043743:intron 30.0%
TTAAGTTAATAAGGTCGACT+TGG - chr7.4:53263849-53263868 None:intergenic 30.0%
TTCTCTTTGCCTTAATATGT+TGG + chr7.4:53262802-53262821 MS.gene043743:intron 30.0%
! TTTAAATGGGGTGTTAAACA+TGG + chr7.4:53261220-53261239 MS.gene043743:CDS 30.0%
! TTTTTGCTCTATCTTTCTCT+AGG + chr7.4:53263306-53263325 MS.gene043743:intron 30.0%
!! CAGTTTTGTAGAACATTTGT+AGG + chr7.4:53261851-53261870 MS.gene043743:intron 30.0%
!! CGGTGTTTATAGGTTTTATA+CGG + chr7.4:53261108-53261127 MS.gene043743:CDS 30.0%
!! GGTGTTTATAGGTTTTATAC+GGG + chr7.4:53261109-53261128 MS.gene043743:CDS 30.0%
!! TCTCTCATTTAACTTTTCCA+TGG - chr7.4:53262453-53262472 None:intergenic 30.0%
!! TGATATATCAATGTCGACTT+CGG + chr7.4:53263243-53263262 MS.gene043743:intron 30.0%
!! TGTTGATAGTTGTGTTGAAT+TGG - chr7.4:53260422-53260441 None:intergenic 30.0%
!! TTGTAGGCTTTAGAGAAAAT+TGG + chr7.4:53261867-53261886 MS.gene043743:intron 30.0%
!!! AGCCCATTATTTTAGTTTGA+GGG + chr7.4:53263443-53263462 MS.gene043743:intron 30.0%
!!! TAGCCCATTATTTTAGTTTG+AGG + chr7.4:53263442-53263461 MS.gene043743:intron 30.0%
!!! TTGGTTTTGAAATAGTGGTT+AGG + chr7.4:53262725-53262744 MS.gene043743:intron 30.0%
AAAAAGATCACATGCGTACT+AGG - chr7.4:53262049-53262068 None:intergenic 35.0%
AACTTCTCTGACAAAATTCG+TGG - chr7.4:53262537-53262556 None:intergenic 35.0%
AAGGTATGTGTCCATGATTT+AGG + chr7.4:53261540-53261559 MS.gene043743:intron 35.0%
AATAAGTGGAGTGATAAGGA+AGG - chr7.4:53263807-53263826 None:intergenic 35.0%
ACTTTAAATTTAGGCGTGTC+TGG + chr7.4:53261634-53261653 MS.gene043743:intron 35.0%
AGCAGTTGAAAAAGCAAAAG+CGG - chr7.4:53260708-53260727 None:intergenic 35.0%
AGGAAGAGAGATTAGAAGAA+CGG - chr7.4:53260633-53260652 None:intergenic 35.0%
ATATCTAAGCTTAGGGTAAC+AGG + chr7.4:53263603-53263622 MS.gene043743:intron 35.0%
ATGGTTATTCACTTGCGAAA+AGG + chr7.4:53262413-53262432 MS.gene043743:intron 35.0%
CATCATCATGTCAACAATGA+AGG + chr7.4:53264213-53264232 MS.gene043743:CDS 35.0%
CCTCCCTCAAACTAAAATAA+TGG - chr7.4:53263449-53263468 None:intergenic 35.0%
CGTAATTTCCTACGATATCA+AGG + chr7.4:53261763-53261782 MS.gene043743:intron 35.0%
GCATATGTTTCTCTTGAAGT+AGG + chr7.4:53263512-53263531 MS.gene043743:intron 35.0%
GGTGTATGTTAGATGGAATT+AGG + chr7.4:53262630-53262649 MS.gene043743:intron 35.0%
GTAGGAAATTACGGTCAAAT+GGG - chr7.4:53261756-53261775 None:intergenic 35.0%
GTCTTGGTCATTATCATTTC+AGG + chr7.4:53261242-53261261 MS.gene043743:CDS 35.0%
GTGTTCATACTTGTGAAGAT+GGG + chr7.4:53261179-53261198 MS.gene043743:CDS 35.0%
TAATCACAACCTATGAAGCA+CGG - chr7.4:53261505-53261524 None:intergenic 35.0%
TGAAATAGTGGTTAGGTCAT+GGG + chr7.4:53262732-53262751 MS.gene043743:intron 35.0%
TGATAGTTGTGTTGAATTGG+TGG - chr7.4:53260419-53260438 None:intergenic 35.0%
TGTAGCAGACCCATATAAAA+TGG + chr7.4:53262609-53262628 MS.gene043743:intron 35.0%
TTAATAAACACAACCCACCA+TGG - chr7.4:53261942-53261961 None:intergenic 35.0%
TTAGTCAATATAGGCTGCTT+AGG + chr7.4:53262357-53262376 MS.gene043743:intron 35.0%
TTGAAATAGTGGTTAGGTCA+TGG + chr7.4:53262731-53262750 MS.gene043743:intron 35.0%
! AGCAGCCTATATTGACTAAA+AGG - chr7.4:53262356-53262375 None:intergenic 35.0%
! TTAAAGTGTCTGTGTGACAT+AGG - chr7.4:53261621-53261640 None:intergenic 35.0%
!! AGGCTTTAGAGAAAATTGGA+TGG + chr7.4:53261871-53261890 MS.gene043743:intron 35.0%
!! ATGGTGGGTTGTGTTTATTA+AGG + chr7.4:53261941-53261960 MS.gene043743:intron 35.0%
!!! ATTTTAGTTTGAGGGAGGAT+TGG + chr7.4:53263451-53263470 MS.gene043743:intron 35.0%
!!! CCATTATTTTAGTTTGAGGG+AGG + chr7.4:53263446-53263465 MS.gene043743:intron 35.0%
!!! CGTTTTTGGCTATCTCTTAT+TGG + chr7.4:53263379-53263398 MS.gene043743:intron 35.0%
AAGAAATCGGAGGTCCAAAT+CGG + chr7.4:53260353-53260372 MS.gene043743:CDS 40.0%
ACACAAAGAATGTACCTGCA+CGG - chr7.4:53263118-53263137 None:intergenic 40.0%
ACCAGTTAATGGAAGAGAAC+AGG + chr7.4:53263571-53263590 MS.gene043743:intron 40.0%
AGAAATGGTGAAACCCAATC+CGG + chr7.4:53262997-53263016 MS.gene043743:CDS 40.0%
AGACACAAAGCAATCCAAGA+TGG - chr7.4:53262247-53262266 None:intergenic 40.0%
AGGGTGAGGGATTTAATAAG+TGG - chr7.4:53263821-53263840 None:intergenic 40.0%
AGGTCTTTCTTTGTTCTCCA+TGG + chr7.4:53262433-53262452 MS.gene043743:intron 40.0%
ATCGACAAGGATTGAGACAT+GGG + chr7.4:53261083-53261102 MS.gene043743:CDS 40.0%
ATTCAAACCGCCGCAAAATA+CGG + chr7.4:53260532-53260551 MS.gene043743:CDS 40.0%
CGTAGGAAATTACGGTCAAA+TGG - chr7.4:53261757-53261776 None:intergenic 40.0%
CTATAATGTGAGCAAGGTAG+AGG + chr7.4:53264104-53264123 MS.gene043743:CDS 40.0%
CTCTACCTTGCTCACATTAT+AGG - chr7.4:53264106-53264125 None:intergenic 40.0%
GAAAGCCTATAATGTGAGCA+AGG + chr7.4:53264098-53264117 MS.gene043743:CDS 40.0%
GAAGATGGGAGTAGATATGT+TGG + chr7.4:53261193-53261212 MS.gene043743:CDS 40.0%
GAGAGATTAGAAGAACGGAA+CGG - chr7.4:53260628-53260647 None:intergenic 40.0%
GCGATGTTTATACTGGAGAA+TGG + chr7.4:53261131-53261150 MS.gene043743:CDS 40.0%
GGTGTTCATACTTGTGAAGA+TGG + chr7.4:53261178-53261197 MS.gene043743:CDS 40.0%
GTTGTGATCCTTGATATCGT+AGG - chr7.4:53261774-53261793 None:intergenic 40.0%
TATACGGGCGATGTTTATAC+TGG + chr7.4:53261124-53261143 MS.gene043743:CDS 40.0%
TATACTGGAGAATGGTCCAA+TGG + chr7.4:53261139-53261158 MS.gene043743:CDS 40.0%
TATAGAGGGCAATATCGACA+AGG + chr7.4:53261070-53261089 MS.gene043743:CDS 40.0%
TATCGACAAGGATTGAGACA+TGG + chr7.4:53261082-53261101 MS.gene043743:CDS 40.0%
TATGAAGGGGATTGGATTGA+TGG + chr7.4:53261001-53261020 MS.gene043743:CDS 40.0%
TATGAGGGGGAGTTTCATAA+GGG + chr7.4:53260932-53260951 MS.gene043743:CDS 40.0%
TCCTGTTCTCTTCCATTAAC+TGG - chr7.4:53263575-53263594 None:intergenic 40.0%
TGAGTGAGCTTACCAGTTAA+TGG + chr7.4:53263560-53263579 MS.gene043743:intron 40.0%
TGATCTATGAAGCACAGACA+CGG + chr7.4:53261331-53261350 MS.gene043743:intron 40.0%
TGATGTTGTTGAAACCGCTA+TGG + chr7.4:53261581-53261600 MS.gene043743:intron 40.0%
TGATTTAGGCCGTGACATAA+TGG + chr7.4:53261554-53261573 MS.gene043743:intron 40.0%
TTATGAGGGGGAGTTTCATA+AGG + chr7.4:53260931-53260950 MS.gene043743:CDS 40.0%
TTATGTCACGGCCTAAATCA+TGG - chr7.4:53261554-53261573 None:intergenic 40.0%
TTGATTGTAGAAGCCATGGT+GGG + chr7.4:53261926-53261945 MS.gene043743:intron 40.0%
TTGGAATGATTGACACCAAC+AGG - chr7.4:53263084-53263103 None:intergenic 40.0%
! AAAGCAATCCAAGATGGACT+GGG - chr7.4:53262241-53262260 None:intergenic 40.0%
! ATTGTATGACTTGTGCCTAG+TGG - chr7.4:53262156-53262175 None:intergenic 40.0%
! CAAATCGGAAAAGAAAGCGT+AGG + chr7.4:53260368-53260387 MS.gene043743:CDS 40.0%
! CTAACTGTCTGCAGTTTGTT+TGG - chr7.4:53263693-53263712 None:intergenic 40.0%
! CTACGCTTTCTTTTCCGATT+TGG - chr7.4:53260370-53260389 None:intergenic 40.0%
! GCGTTAATCAGTTCCGTTTT+TGG + chr7.4:53263365-53263384 MS.gene043743:intron 40.0%
! GGATTGATGGAAGGTATGAT+GGG + chr7.4:53261014-53261033 MS.gene043743:CDS 40.0%
! GGGGTATATCGTTTTGCAAA+TGG + chr7.4:53262913-53262932 MS.gene043743:CDS 40.0%
! TAGGGTAACAGGCTCAATTT+TGG + chr7.4:53263614-53263633 MS.gene043743:intron 40.0%
! TCATAAGTGTCGTATCGTGT+CGG + chr7.4:53261427-53261446 MS.gene043743:intron 40.0%
! TGGATTGATGGAAGGTATGA+TGG + chr7.4:53261013-53261032 MS.gene043743:CDS 40.0%
!! AGTTAATAAGGTCGACTTGG+TGG - chr7.4:53263846-53263865 None:intergenic 40.0%
!! TGTGTTGAATTGGTGGTGTT+GGG - chr7.4:53260412-53260431 None:intergenic 40.0%
!! TTCATAAGGGGAAGTGTTCA+GGG + chr7.4:53260945-53260964 MS.gene043743:CDS 40.0%
!! TTGAATGGCGGTTTGTTAGA+AGG - chr7.4:53260518-53260537 None:intergenic 40.0%
!! TTGTGTTGAATTGGTGGTGT+TGG - chr7.4:53260413-53260432 None:intergenic 40.0%
!! TTTCATAAGGGGAAGTGTTC+AGG + chr7.4:53260944-53260963 MS.gene043743:CDS 40.0%
AACAGGAGAAACAGGGTAAG+TGG - chr7.4:53263067-53263086 None:intergenic 45.0%
AAGGGGATTGGATTGATGGA+AGG + chr7.4:53261005-53261024 MS.gene043743:CDS 45.0%
ACGGGAGATGATTTCTGTTG+GGG - chr7.4:53260495-53260514 None:intergenic 45.0%
ACTTTGCCAATGACCGGATT+GGG - chr7.4:53263013-53263032 None:intergenic 45.0%
AGAGGAAAGGAACGTAGAGA+AGG - chr7.4:53260758-53260777 None:intergenic 45.0%
ATGAGGGGGAGTTTCATAAG+GGG + chr7.4:53260933-53260952 MS.gene043743:CDS 45.0%
CAAAGCAATCCAAGATGGAC+TGG - chr7.4:53262242-53262261 None:intergenic 45.0%
CAAGGATTGAGACATGGGTT+CGG + chr7.4:53261088-53261107 MS.gene043743:CDS 45.0%
CAAGGGGAAGTCGTTATAGA+GGG + chr7.4:53261056-53261075 MS.gene043743:CDS 45.0%
CTACTTATCCCAGTCCATCT+TGG + chr7.4:53262230-53262249 MS.gene043743:intron 45.0%
CTTCAATCGCAACACCATAG+CGG - chr7.4:53261598-53261617 None:intergenic 45.0%
GAAAGAAAGAACGTGAAGCG+TGG - chr7.4:53260673-53260692 None:intergenic 45.0%
GACGGGAGATGATTTCTGTT+GGG - chr7.4:53260496-53260515 None:intergenic 45.0%
GATCCTATGGTCCAGAAAAC+GGG - chr7.4:53260845-53260864 None:intergenic 45.0%
GCAAATGGCCATCGATATGA+AGG + chr7.4:53262928-53262947 MS.gene043743:CDS 45.0%
GGATCCTATGGTCCAGAAAA+CGG - chr7.4:53260846-53260865 None:intergenic 45.0%
GTTGATTGTAGAAGCCATGG+TGG + chr7.4:53261925-53261944 MS.gene043743:intron 45.0%
TAAGTGGTGTTCTGTGTGCT+TGG - chr7.4:53263051-53263070 None:intergenic 45.0%
TAGTGGTTAGGTCATGGGAT+CGG + chr7.4:53262737-53262756 MS.gene043743:intron 45.0%
TCGATCAGACCCATTAGGTT+TGG - chr7.4:53263975-53263994 None:intergenic 45.0%
TGACACCAACAGGAGAAACA+GGG - chr7.4:53263074-53263093 None:intergenic 45.0%
TGGAGGTAAAGGTAGAGAAG+AGG - chr7.4:53260653-53260672 None:intergenic 45.0%
TTGACACCAACAGGAGAAAC+AGG - chr7.4:53263075-53263094 None:intergenic 45.0%
! AACCTAATGGGTCTGATCGA+TGG + chr7.4:53263975-53263994 MS.gene043743:intron 45.0%
! ACCTAATGGGTCTGATCGAT+GGG + chr7.4:53263976-53263995 MS.gene043743:intron 45.0%
! ACTTACCCTGTTTCTCCTGT+TGG + chr7.4:53263066-53263085 MS.gene043743:CDS 45.0%
! AGTATGAGTGGGAGGTATGA+AGG + chr7.4:53260986-53261005 MS.gene043743:CDS 45.0%
! GTATGAGTGGGAGGTATGAA+GGG + chr7.4:53260987-53261006 MS.gene043743:CDS 45.0%
! GTATTTTGCGGCGGTTTGAA+TGG - chr7.4:53260533-53260552 None:intergenic 45.0%
! TATGAGTGGGAGGTATGAAG+GGG + chr7.4:53260988-53261007 MS.gene043743:CDS 45.0%
! TGATGGAAGGCCGTATTTTG+CGG - chr7.4:53260545-53260564 None:intergenic 45.0%
! TGGGGTGTTAAACATGGTCT+TGG + chr7.4:53261226-53261245 MS.gene043743:CDS 45.0%
!! AAGGTATGATGGGTATGGTG+TGG + chr7.4:53261024-53261043 MS.gene043743:CDS 45.0%
!! ATAAGGTCGACTTGGTGGTT+AGG - chr7.4:53263841-53263860 None:intergenic 45.0%
!! ATGGCGGTTTGTTAGAAGGA+CGG - chr7.4:53260514-53260533 None:intergenic 45.0%
!! GACATGGGTTCGGTGTTTAT+AGG + chr7.4:53261098-53261117 MS.gene043743:CDS 45.0%
!! GATGGAAGGTATGATGGGTA+TGG + chr7.4:53261019-53261038 MS.gene043743:CDS 45.0%
!! GTTTGAGGGAGGATTGGTTA+TGG + chr7.4:53263457-53263476 MS.gene043743:intron 45.0%
!! TAAGGTCGACTTGGTGGTTA+GGG - chr7.4:53263840-53263859 None:intergenic 45.0%
!! TGCGTTGATTGTAGAAGCCA+TGG + chr7.4:53261922-53261941 MS.gene043743:intron 45.0%
!! TGGTGGTGTTGGGTTGAAAT+CGG - chr7.4:53260402-53260421 None:intergenic 45.0%
AACGTGAAGCGTGGAGGTAA+AGG - chr7.4:53260664-53260683 None:intergenic 50.0%
AATGGTCAGAGTCATGGGTG+TGG + chr7.4:53261157-53261176 MS.gene043743:CDS 50.0%
ACACCCATGACTCTGACCAT+TGG - chr7.4:53261158-53261177 None:intergenic 50.0%
AGAAACGGAGACACATACGC+GGG + chr7.4:53262859-53262878 MS.gene043743:intron 50.0%
AGAAAGAACGTGAAGCGTGG+AGG - chr7.4:53260670-53260689 None:intergenic 50.0%
AGCAGCTACTCTAGCTGCAT+TGG - chr7.4:53264169-53264188 None:intergenic 50.0%
ATGGGTATGGTGTGGAGACA+TGG + chr7.4:53261032-53261051 MS.gene043743:CDS 50.0%
ATGGTCCAGAAAACGGGAAG+AGG - chr7.4:53260839-53260858 None:intergenic 50.0%
CAATCCGGTCATTGGCAAAG+TGG + chr7.4:53263012-53263031 MS.gene043743:CDS 50.0%
CACTCCACTTTGCCAATGAC+CGG - chr7.4:53263019-53263038 None:intergenic 50.0%
CACTTTGCCAATGACCGGAT+TGG - chr7.4:53263014-53263033 None:intergenic 50.0%
CAGAAACGGAGACACATACG+CGG + chr7.4:53262858-53262877 MS.gene043743:intron 50.0%
CCAAGCCGTTTCTCTGACTT+GGG - chr7.4:53260872-53260891 None:intergenic 50.0%
CCAAGTCAGAGAAACGGCTT+GGG + chr7.4:53260870-53260889 MS.gene043743:CDS 50.0%
CGGACAGGATGCATGGATTT+GGG + chr7.4:53262893-53262912 MS.gene043743:CDS 50.0%
GCAAGGGGAAGTCGTTATAG+AGG + chr7.4:53261055-53261074 MS.gene043743:CDS 50.0%
GGACAGGATGCATGGATTTG+GGG + chr7.4:53262894-53262913 MS.gene043743:CDS 50.0%
GGACGGGAGATGATTTCTGT+TGG - chr7.4:53260497-53260516 None:intergenic 50.0%
GGCATGAAGGAAGAAGGCAA+GGG + chr7.4:53262956-53262975 MS.gene043743:CDS 50.0%
GGTCCAATGGTCAGAGTCAT+GGG + chr7.4:53261152-53261171 MS.gene043743:CDS 50.0%
GTGAAACCCAATCCGGTCAT+TGG + chr7.4:53263004-53263023 MS.gene043743:CDS 50.0%
TATGAAGGAGCCTGGCATGA+AGG + chr7.4:53262943-53262962 MS.gene043743:CDS 50.0%
TCCAGAAAACGGGAAGAGGA+GGG - chr7.4:53260835-53260854 None:intergenic 50.0%
TCGTGAATGAGACGACGAAG+AGG - chr7.4:53260807-53260826 None:intergenic 50.0%
TGGCATGAAGGAAGAAGGCA+AGG + chr7.4:53262955-53262974 MS.gene043743:CDS 50.0%
TGGGTATGGTGTGGAGACAT+GGG + chr7.4:53261033-53261052 MS.gene043743:CDS 50.0%
TGGTCCAATGGTCAGAGTCA+TGG + chr7.4:53261151-53261170 MS.gene043743:CDS 50.0%
TGTCAATGCCGTGTCTGTTG+TGG + chr7.4:53261720-53261739 MS.gene043743:intron 50.0%
TTCTGTTGGGGAGATGTCGA+TGG - chr7.4:53260483-53260502 None:intergenic 50.0%
TTGCCTTCTTCCTTCATGCC+AGG - chr7.4:53262956-53262975 None:intergenic 50.0%
! ATGTCGATGGAGTGATGACG+TGG - chr7.4:53260470-53260489 None:intergenic 50.0%
! CTTCCCGTTTTCTGGACCAT+AGG + chr7.4:53260839-53260858 MS.gene043743:CDS 50.0%
! TATTATCCGTGTCGGCGTGT+CGG - chr7.4:53261378-53261397 None:intergenic 50.0%
! TTTTGCGGCGGTTTGAATGG+CGG - chr7.4:53260530-53260549 None:intergenic 50.0%
!! TGGCGGTTTGTTAGAAGGAC+GGG - chr7.4:53260513-53260532 None:intergenic 50.0%
AAACGGAGACACATACGCGG+GGG + chr7.4:53262861-53262880 MS.gene043743:CDS 55.0%
ATACGCGGGGGAATACTTCG+CGG + chr7.4:53262873-53262892 MS.gene043743:CDS 55.0%
ATGGTGTGGAGACATGGGCA+AGG + chr7.4:53261038-53261057 MS.gene043743:CDS 55.0%
CAGAAAACGGGAAGAGGAGG+GGG - chr7.4:53260833-53260852 None:intergenic 55.0%
CCAGAAAACGGGAAGAGGAG+GGG - chr7.4:53260834-53260853 None:intergenic 55.0%
CCCAAGCCGTTTCTCTGACT+TGG - chr7.4:53260873-53260892 None:intergenic 55.0%
CCCAAGTCAGAGAAACGGCT+TGG + chr7.4:53260869-53260888 MS.gene043743:CDS 55.0%
CCCGACCCAAGTCAGAGAAA+CGG + chr7.4:53260864-53260883 MS.gene043743:CDS 55.0%
CGATGCAGCCACAACAGACA+CGG - chr7.4:53261731-53261750 None:intergenic 55.0%
CTGCACGGCAGTGAGTACTT+TGG - chr7.4:53263103-53263122 None:intergenic 55.0%
GAAACGGAGACACATACGCG+GGG + chr7.4:53262860-53262879 MS.gene043743:intron 55.0%
GAACGGAACGGTGCTTCTTG+AGG - chr7.4:53260616-53260635 None:intergenic 55.0%
GAACGGGGACGTTTATGAGG+GGG + chr7.4:53260919-53260938 MS.gene043743:CDS 55.0%
GAAGGAAGAAGGCAAGGGCT+TGG + chr7.4:53262961-53262980 MS.gene043743:CDS 55.0%
GAGCCTGGCATGAAGGAAGA+AGG + chr7.4:53262950-53262969 MS.gene043743:CDS 55.0%
GATGATGCGAAAGGCGGTTG+CGG - chr7.4:53260588-53260607 None:intergenic 55.0%
GCCAGGCTCCTTCATATCGA+TGG - chr7.4:53262939-53262958 None:intergenic 55.0%
GCCATCGATATGAAGGAGCC+TGG + chr7.4:53262935-53262954 MS.gene043743:CDS 55.0%
GCCCATCGATCAGACCCATT+AGG - chr7.4:53263980-53263999 None:intergenic 55.0%
GCGGACAGGATGCATGGATT+TGG + chr7.4:53262892-53262911 MS.gene043743:CDS 55.0%
GGAACGGGGACGTTTATGAG+GGG + chr7.4:53260918-53260937 MS.gene043743:CDS 55.0%
GGGAACGGGGACGTTTATGA+GGG + chr7.4:53260917-53260936 MS.gene043743:CDS 55.0%
GTCCAGAAAACGGGAAGAGG+AGG - chr7.4:53260836-53260855 None:intergenic 55.0%
TACTTCGCGGACAGGATGCA+TGG + chr7.4:53262886-53262905 MS.gene043743:CDS 55.0%
TATGAAGCACGGACGCTCCT+CGG - chr7.4:53261494-53261513 None:intergenic 55.0%
TGAAGCACAGACACGGACAC+CGG + chr7.4:53261338-53261357 MS.gene043743:intron 55.0%
TGGGAACGGGGACGTTTATG+AGG + chr7.4:53260916-53260935 MS.gene043743:CDS 55.0%
TGGGTCCAGGTGTTTGGGAA+CGG + chr7.4:53260902-53260921 MS.gene043743:CDS 55.0%
TGGTGTGGAGACATGGGCAA+GGG + chr7.4:53261039-53261058 MS.gene043743:CDS 55.0%
! CAAAGTACTCACTGCCGTGC+AGG + chr7.4:53263101-53263120 MS.gene043743:CDS 55.0%
! GTCAGAGAAACGGCTTGGGT+CGG + chr7.4:53260874-53260893 MS.gene043743:CDS 55.0%
! GTGGGAGGTATGAAGGGGAT+TGG + chr7.4:53260993-53261012 MS.gene043743:CDS 55.0%
! GTGTCGTATCGTGTCGGTGT+CGG + chr7.4:53261433-53261452 MS.gene043743:intron 55.0%
! TCAGAGAAACGGCTTGGGTC+GGG + chr7.4:53260875-53260894 MS.gene043743:CDS 55.0%
! TGACTTGGGTCGGGATCCTA+TGG - chr7.4:53260858-53260877 None:intergenic 55.0%
! TGGAAGGCCGTATTTTGCGG+CGG - chr7.4:53260542-53260561 None:intergenic 55.0%
! TGGAGTGATGACGTGGACAG+AGG - chr7.4:53260463-53260482 None:intergenic 55.0%
!! AAGGGGAAGTGTTCAGGGAG+TGG + chr7.4:53260950-53260969 MS.gene043743:CDS 55.0%
!! ACAGAGGTGTTGACGCTGAG+AGG - chr7.4:53260447-53260466 None:intergenic 55.0%
!! CCGTTTCTCTGACTTGGGTC+GGG - chr7.4:53260867-53260886 None:intergenic 55.0%
!! CGACTTGGTGGTTAGGGTGA+GGG - chr7.4:53263834-53263853 None:intergenic 55.0%
!! GCCGTTTCTCTGACTTGGGT+CGG - chr7.4:53260868-53260887 None:intergenic 55.0%
!! GGAGAGGGTGAGATGATGGA+AGG - chr7.4:53260558-53260577 None:intergenic 55.0%
!! GGGAGGATTGGTTATGGTCG+AGG + chr7.4:53263463-53263482 MS.gene043743:intron 55.0%
!! TCGACTTGGTGGTTAGGGTG+AGG - chr7.4:53263835-53263854 None:intergenic 55.0%
AACGGTGCTTCTTGAGGCGG+CGG - chr7.4:53260610-53260629 None:intergenic 60.0%
AGGCGGAGAGGGTGAGATGA+TGG - chr7.4:53260562-53260581 None:intergenic 60.0%
CGGAACGGTGCTTCTTGAGG+CGG - chr7.4:53260613-53260632 None:intergenic 60.0%
GGATTAGGCGTGTCCCGTGT+CGG - chr7.4:53261473-53261492 None:intergenic 60.0%
GGGTCCAGGTGTTTGGGAAC+GGG + chr7.4:53260903-53260922 MS.gene043743:CDS 60.0%
GGTCCAGGTGTTTGGGAACG+GGG + chr7.4:53260904-53260923 MS.gene043743:CDS 60.0%
GGTGTGGAGACATGGGCAAG+GGG + chr7.4:53261040-53261059 MS.gene043743:CDS 60.0%
! CAGAGAAACGGCTTGGGTCG+GGG + chr7.4:53260876-53260895 MS.gene043743:CDS 60.0%
! CCCCTCCTCTTCCCGTTTTC+TGG + chr7.4:53260831-53260850 MS.gene043743:CDS 60.0%
! GGTGCTGGGTCCAGGTGTTT+GGG + chr7.4:53260897-53260916 MS.gene043743:CDS 60.0%
!! GAGGAGCGTCCGTGCTTCAT+AGG + chr7.4:53261493-53261512 MS.gene043743:intron 60.0%
ACACCGACGCGTGTCCGACA+CGG + chr7.4:53261456-53261475 MS.gene043743:intron 65.0%
CACGGACACCGGACACGACA+CGG + chr7.4:53261349-53261368 MS.gene043743:intron 65.0%
CACGGGACACGCCTAATCCG+AGG + chr7.4:53261474-53261493 MS.gene043743:intron 65.0%
CGGGGGAATACTTCGCGGAC+AGG + chr7.4:53262878-53262897 MS.gene043743:CDS 65.0%
CGTCCCCGTTCCCAAACACC+TGG - chr7.4:53260910-53260929 None:intergenic 65.0%
GAGGCGGCGGATGATGCGAA+AGG - chr7.4:53260597-53260616 None:intergenic 65.0%
GATGCGAAAGGCGGTTGCGG+CGG - chr7.4:53260585-53260604 None:intergenic 65.0%
GCACGGACGCTCCTCGGATT+AGG - chr7.4:53261488-53261507 None:intergenic 65.0%
GCGGCGGATGATGCGAAAGG+CGG - chr7.4:53260594-53260613 None:intergenic 65.0%
TGGGTCTGATCGATGGGCCG+AGG + chr7.4:53263982-53264001 MS.gene043743:intron 65.0%
! GTCGGTGTCCGTGTCGTGTC+CGG - chr7.4:53261360-53261379 None:intergenic 65.0%
!! GGGTGCTGGGTCCAGGTGTT+TGG + chr7.4:53260896-53260915 MS.gene043743:CDS 65.0%
AAAGGCGGTTGCGGCGGAGG+CGG - chr7.4:53260579-53260598 None:intergenic 70.0%
CACCGACGCGTGTCCGACAC+GGG + chr7.4:53261457-53261476 MS.gene043743:intron 70.0%
CGGACACCGACACGCCGACA+CGG + chr7.4:53261369-53261388 MS.gene043743:intron 70.0%
GTCCCGTGTCGGACACGCGT+CGG - chr7.4:53261462-53261481 None:intergenic 70.0%
! AACGGCTTGGGTCGGGGTGC+TGG + chr7.4:53260882-53260901 MS.gene043743:CDS 70.0%
! ACGGCTTGGGTCGGGGTGCT+GGG + chr7.4:53260883-53260902 MS.gene043743:CDS 70.0%
GCGAAAGGCGGTTGCGGCGG+AGG - chr7.4:53260582-53260601 None:intergenic 75.0%
GGTTGCGGCGGAGGCGGAGA+GGG - chr7.4:53260573-53260592 None:intergenic 75.0%
!! TGGGTCGGGGTGCTGGGTCC+AGG + chr7.4:53260889-53260908 MS.gene043743:CDS 75.0%
! CGGTTGCGGCGGAGGCGGAG+AGG - chr7.4:53260574-53260593 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 53260344 53264257 53260344 ID=MS.gene043743
chr7.4 mRNA 53260344 53264257 53260344 ID=MS.gene043743.t1;Parent=MS.gene043743
chr7.4 exon 53260344 53261263 53260344 ID=MS.gene043743.t1.exon1;Parent=MS.gene043743.t1
chr7.4 CDS 53260344 53261263 53260344 ID=cds.MS.gene043743.t1;Parent=MS.gene043743.t1
chr7.4 exon 53262861 53263122 53262861 ID=MS.gene043743.t1.exon2;Parent=MS.gene043743.t1
chr7.4 CDS 53262861 53263122 53262861 ID=cds.MS.gene043743.t1;Parent=MS.gene043743.t1
chr7.4 exon 53264078 53264257 53264078 ID=MS.gene043743.t1.exon3;Parent=MS.gene043743.t1
chr7.4 CDS 53264078 53264257 53264078 ID=cds.MS.gene043743.t1;Parent=MS.gene043743.t1
Gene Sequence

>MS.gene043743

ATGCATCAGAAGAAATCGGAGGTCCAAATCGGAAAAGAAAGCGTAGGCGTCTCTTCCGATTTCAACCCAACACCACCAATTCAACACAACTATCAACAAACCTCTCAGCGTCAACACCTCTGTCCACGTCATCACTCCATCGACATCTCCCCAACAGAAATCATCTCCCGTCCTTCTAACAAACCGCCATTCAAACCGCCGCAAAATACGGCCTTCCATCATCTCACCCTCTCCGCCTCCGCCGCAACCGCCTTTCGCATCATCCGCCGCCTCAAGAAGCACCGTTCCGTTCTTCTAATCTCTCTTCCTCTTCTCTACCTTTACCTCCACGCTTCACGTTCTTTCTTTCTTGATTTTCTCACCGCTTTTGCTTTTTCAACTGCTTTGTTGTTTTCTCTTAATATAGCTCTTCCTTCTCTACGTTCCTTTCCTCTTCATCTTAATTTGCATAAAATTCGTTCCTCTTCGTCGTCTCATTCACGATCTCCCCCTCCTCTTCCCGTTTTCTGGACCATAGGATCCCGACCCAAGTCAGAGAAACGGCTTGGGTCGGGGTGCTGGGTCCAGGTGTTTGGGAACGGGGACGTTTATGAGGGGGAGTTTCATAAGGGGAAGTGTTCAGGGAGTGGTGTTTATTATTATAGTATGAGTGGGAGGTATGAAGGGGATTGGATTGATGGAAGGTATGATGGGTATGGTGTGGAGACATGGGCAAGGGGAAGTCGTTATAGAGGGCAATATCGACAAGGATTGAGACATGGGTTCGGTGTTTATAGGTTTTATACGGGCGATGTTTATACTGGAGAATGGTCCAATGGTCAGAGTCATGGGTGTGGTGTTCATACTTGTGAAGATGGGAGTAGATATGTTGGAGAGTTTAAATGGGGTGTTAAACATGGTCTTGGTCATTATCATTTCAGGTTTGTTTTTTTTGTTCATGTTTCCCTTTGTTTAATTCTTGTGTTGCTGAATTGTCTTATATTGTTGTGATCTATGAAGCACAGACACGGACACCGGACACGACACGGACACCGACACGCCGACACGGATAATAATTTGAGAAAACGATATAATTTAGTGTAATCATAAGTGTCGTATCGTGTCGGTGTCGGACACCGACGCGTGTCCGACACGGGACACGCCTAATCCGAGGAGCGTCCGTGCTTCATAGGTTGTGATTATTAGGGTTTTAAATAAAGGTATGTGTCCATGATTTAGGCCGTGACATAATGGTTTTTGATGTTGTTGAAACCGCTATGGTGTTGCGATTGAAGCCTATGTCACACAGACACTTTAAATTTAGGCGTGTCTGGTGACACATGTGATTTACATTCAATTGTTATTCCAGTTTTTAAAATTTATGGCTGGTGTTAATGTGTCAATGCCGTGTCTGTTGTGGCTGCATCGATCCCATTTGACCGTAATTTCCTACGATATCAAGGATCACAACCTTTAACACAATTGTTATTTGAAACCTGAATTGTGATATTGTTGTTTTGAGGATGTTCAGTTTTGTAGAACATTTGTAGGCTTTAGAGAAAATTGGATGGATTTGAATCTTCCAATATGGTAGATTTTTGCGTTGATTGTAGAAGCCATGGTGGGTTGTGTTTATTAAGGATTGAGAGTAGGTTGAGTGAGAAGAATATAACTACTGAAATGGACATAATATGTACCGATATTTTTTGAATAAAAAGTGTTGCCTAGTACGCATGTGATCTTTTTTTCATTTTCGTTATTCTCTTCATGTGAAAAGAAATTATATTTGATTTGAATTTTATTTGTTTCAAACTTGACAACTATATTATACCACTAGGCACAAGTCATACAATGTGAGTGACGATATTTTTGTTTTGATTTTTAGTTGTTGTCATGAATCTTGATGACTACTTATCCCAGTCCATCTTGGATTGCTTTGTGTCTACGTTGTTGTATTAAAAACTCTGATGACTTTTTTTCTCTCTTATGGAATGATTGAGATGTTGTGTATTCCATTTGTCTGTTCAAATCCTTTTAGTCAATATAGGCTGCTTAGGATTGCTTCTAGCTTAAGAGAGCTTGTCAATTATATGGTTATTCACTTGCGAAAAGGTCTTTCTTTGTTCTCCATGGAAAAGTTAAATGAGAGAATTTCTAAAATAATTGAGATGCATATGCTAATTTCAACTTACTCTTCTAATATTTCTTCTTCCACGAATTTTGTCAGAGAAGTTTAATCAAACTGACTTTAGTTGAAACGAGTTAGCAGATAGAGTGAGAGACTACTGTAGCAGACCCATATAAAATGGTGTATGTTAGATGGAATTAGGATGAGAATTGAGAGAAGAAAAATAGAAATGAAAGGGTTTAAATAATTGGAGGAAAACAATCAAAATGAGTTTTTGGTTTTGAAATAGTGGTTAGGTCATGGGATCGGCATGAATTTCAATTGAATTATGAATAGAGTTGTTTGCTACCTTTCTCTTTGCCTTAATATGTTGGGTTTTTCATTGTAACTAAAATCTTATGCTTAATCAGAAACGGAGACACATACGCGGGGGAATACTTCGCGGACAGGATGCATGGATTTGGGGTATATCGTTTTGCAAATGGCCATCGATATGAAGGAGCCTGGCATGAAGGAAGAAGGCAAGGGCTTGGAATGTATACATTTAGAAATGGTGAAACCCAATCCGGTCATTGGCAAAGTGGAGTGCTTGACATTCCAAGCACACAGAACACCACTTACCCTGTTTCTCCTGTTGGTGTCAATCATTCCAAAGTACTCACTGCCGTGCAGGTACATTCTTTGTGTTTTATGATTTCCCTTTGTTCTTGTTAAATGTTATTTTCTCATTTAGAACATTAATTAAAGAATAATGAATAGTGTTGTATATGTTCTCTTAGACTACAGTGTCGTTGATATATCAATGTCGACTTCGGATGAATTTGTCAATATCGGTTATTTTGAATGTTATAACAATTTTTGCTCTATCTTTCTCTAGGTGTTATTATTAATCGTTTTTTACGACTCATCAAATTGCGTTAATCAGTTCCGTTTTTGGCTATCTCTTATTGGTTTTAATTTTTTATTAGTAAAACTGCATCATTTTTATATTTAGCCCATTATTTTAGTTTGAGGGAGGATTGGTTATGGTCGAGGTTAGTTTTAAGTATTTGTTGCCGTAAGCATATGTTTCTCTTGAAGTAGGTCTTAGCTAAATATTTGTTGTGATTTGAGTGAGCTTACCAGTTAATGGAAGAGAACAGGATTGTATTTATATCTAAGCTTAGGGTAACAGGCTCAATTTTGGACATCTTTTATTGTATGCATAAAAATTAGCACAATATTGTAAGAGGAAATAAACCAAACAAACTGCAGACAGTTAGACATTATTATTATTTACTGCATTATGATCTTTCATTTTCATTTTTGAAATGACATGCTAATATTTTATTGAGGATTGGAATTGAACTCTCTCCTTCCTTATCACTCCACTTATTAAATCCCTCACCCTAACCACCAAGTCGACCTTATTAACTTAATTCCCTTTCATTTTTCATTATTAATGAATAAAGTATTTCTGATTTATTTCAGATGTTATGTATAAATAGGATTACAAACACGAATTTGTTCAAATAAACTATTCCAAACCTAATGGGTCTGATCGATGGGCCGAGGACAGTTATTACAAATAATAGTAAAATATACGTTATTTACAGCAATTAATCATATTTATTTGTTTCGCAAATAGGAAGCAAGACGAGCAGCAGAGAAAGCCTATAATGTGAGCAAGGTAGAGGAAAGAGTAAACAGAGCAGTATCAGCAGCTAATAGAGCAGCCAATGCAGCTAGAGTAGCTGCTGTCAAAGCTGTGCAAAAGCAAATGCATCATCATGTCAACAATGAAGGTTTCCCAATTCCTGTTATGTAA
Protein sequence

>MS.gene043743.t1

MHQKKSEVQIGKESVGVSSDFNPTPPIQHNYQQTSQRQHLCPRHHSIDISPTEIISRPSNKPPFKPPQNTAFHHLTLSASAATAFRIIRRLKKHRSVLLISLPLLYLYLHASRSFFLDFLTAFAFSTALLFSLNIALPSLRSFPLHLNLHKIRSSSSSHSRSPPPLPVFWTIGSRPKSEKRLGSGCWVQVFGNGDVYEGEFHKGKCSGSGVYYYSMSGRYEGDWIDGRYDGYGVETWARGSRYRGQYRQGLRHGFGVYRFYTGDVYTGEWSNGQSHGCGVHTCEDGSRYVGEFKWGVKHGLGHYHFRNGDTYAGEYFADRMHGFGVYRFANGHRYEGAWHEGRRQGLGMYTFRNGETQSGHWQSGVLDIPSTQNTTYPVSPVGVNHSKVLTAVQEARRAAEKAYNVSKVEERVNRAVSAANRAANAARVAAVKAVQKQMHHHVNNEGFPIPVM