Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044447.t1 | XP_013457987.1 | 93.1 | 605 | 38 | 3 | 1 | 601 | 1 | 605 | 2.90E-227 | 798.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044447.t1 | Q9C911 | 70.0 | 320 | 83 | 4 | 1 | 307 | 1 | 320 | 1.3e-98 | 362.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044447.t1 | A0A072USH1 | 93.1 | 605 | 38 | 3 | 1 | 601 | 1 | 605 | 2.1e-227 | 798.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene044447.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene044447 | MS.gene35108 | PPI |
| MS.gene044447 | MS.gene028350 | PPI |
| MS.gene044447 | MS.gene28721 | PPI |
| MS.gene044447 | MS.gene064542 | PPI |
| MS.gene044447 | MS.gene36441 | PPI |
| MS.gene044447 | MS.gene73119 | PPI |
| MS.gene044447 | MS.gene35110 | PPI |
| MS.gene035805 | MS.gene044447 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044447.t1 | MTR_4g109510 | 96.860 | 605 | 15 | 3 | 1 | 601 | 1 | 605 | 0.0 | 1173 |
| MS.gene044447.t1 | MTR_3g070480 | 80.682 | 88 | 15 | 2 | 480 | 565 | 6 | 93 | 1.53e-26 | 105 |
| MS.gene044447.t1 | MTR_7g109430 | 30.380 | 237 | 113 | 9 | 9 | 230 | 97 | 296 | 1.35e-16 | 84.0 |
| MS.gene044447.t1 | MTR_3g113680 | 29.958 | 237 | 114 | 9 | 9 | 230 | 97 | 296 | 1.31e-15 | 80.9 |
| MS.gene044447.t1 | MTR_7g112360 | 45.588 | 68 | 37 | 0 | 8 | 75 | 16 | 83 | 1.79e-15 | 73.6 |
| MS.gene044447.t1 | MTR_7g112360 | 45.588 | 68 | 37 | 0 | 8 | 75 | 16 | 83 | 2.21e-15 | 74.7 |
| MS.gene044447.t1 | MTR_8g022310 | 53.731 | 67 | 29 | 1 | 10 | 74 | 12 | 78 | 1.95e-14 | 72.8 |
| MS.gene044447.t1 | MTR_8g022310 | 53.731 | 67 | 29 | 1 | 10 | 74 | 12 | 78 | 2.35e-14 | 72.8 |
| MS.gene044447.t1 | MTR_8g022310 | 52.941 | 68 | 30 | 1 | 9 | 74 | 11 | 78 | 2.79e-14 | 72.8 |
| MS.gene044447.t1 | MTR_8g022310 | 53.731 | 67 | 29 | 1 | 10 | 74 | 12 | 78 | 3.42e-14 | 72.8 |
| MS.gene044447.t1 | MTR_4g085070 | 50.000 | 62 | 31 | 0 | 14 | 75 | 18 | 79 | 6.20e-13 | 67.4 |
| MS.gene044447.t1 | MTR_1g110310 | 34.899 | 149 | 79 | 5 | 2 | 149 | 10 | 141 | 5.94e-12 | 68.6 |
| MS.gene044447.t1 | MTR_6g026940 | 50.000 | 64 | 31 | 1 | 9 | 71 | 3 | 66 | 7.62e-11 | 62.0 |
| MS.gene044447.t1 | MTR_2g104030 | 38.462 | 104 | 56 | 2 | 9 | 109 | 71 | 169 | 7.96e-11 | 65.1 |
| MS.gene044447.t1 | MTR_6g027110 | 46.269 | 67 | 35 | 1 | 9 | 74 | 3 | 69 | 9.15e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044447.t1 | AT1G74250 | 52.174 | 575 | 202 | 11 | 1 | 523 | 1 | 554 | 2.61e-163 | 481 |
| MS.gene044447.t1 | AT3G11450 | 28.099 | 242 | 126 | 7 | 2 | 230 | 93 | 299 | 5.32e-15 | 79.0 |
| MS.gene044447.t1 | AT3G14200 | 53.846 | 65 | 29 | 1 | 10 | 74 | 14 | 77 | 3.75e-13 | 69.7 |
| MS.gene044447.t1 | AT1G56300 | 38.356 | 73 | 45 | 0 | 2 | 74 | 7 | 79 | 1.03e-12 | 65.5 |
| MS.gene044447.t1 | AT1G56300 | 38.356 | 73 | 45 | 0 | 2 | 74 | 7 | 79 | 1.41e-12 | 66.2 |
| MS.gene044447.t1 | AT1G71000 | 41.892 | 74 | 43 | 0 | 1 | 74 | 1 | 74 | 7.24e-12 | 64.3 |
| MS.gene044447.t1 | AT1G71000 | 41.892 | 74 | 43 | 0 | 1 | 74 | 1 | 74 | 7.26e-12 | 64.7 |
| MS.gene044447.t1 | AT5G25530 | 35.345 | 116 | 59 | 5 | 9 | 112 | 5 | 116 | 1.13e-11 | 67.0 |
| MS.gene044447.t1 | AT5G06110 | 27.799 | 259 | 121 | 10 | 9 | 251 | 101 | 309 | 4.19e-11 | 66.6 |
| MS.gene044447.t1 | AT5G06110 | 27.799 | 259 | 121 | 10 | 9 | 251 | 101 | 309 | 4.19e-11 | 66.6 |
Find 146 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTCCTCTTATGGGGAATT+TGG | 0.141158 | 8.1:+16090819 | MS.gene044447:CDS |
| ACGGAATTAGACTTTGAATT+TGG | 0.172659 | 8.1:-16090634 | None:intergenic |
| CGAAGCCACCGCTCAGTTTC+AGG | 0.199966 | 8.1:+16090525 | MS.gene044447:CDS |
| TATGAAGGTGAAGAAGAATT+TGG | 0.247762 | 8.1:+16091074 | MS.gene044447:CDS |
| TTGCTAAGAAATTAGGTTTA+GGG | 0.251194 | 8.1:+16090779 | MS.gene044447:CDS |
| TGTTAGACAGGCTCCTCTTA+TGG | 0.265835 | 8.1:+16090810 | MS.gene044447:CDS |
| GGCGTTGGAGAGCGAGTTTC+CGG | 0.265860 | 8.1:-16090465 | None:intergenic |
| TTTGCTAAGAAATTAGGTTT+AGG | 0.269838 | 8.1:+16090778 | MS.gene044447:CDS |
| GTTCTTGAAACAATGGTATC+TGG | 0.274370 | 8.1:+16091651 | MS.gene044447:CDS |
| TGATGTGTTTGATAAAATTC+AGG | 0.297358 | 8.1:+16090741 | MS.gene044447:CDS |
| GAGAAGAATGTAATCAATAT+TGG | 0.312751 | 8.1:+16091972 | MS.gene044447:CDS |
| TTCCGGTAAGGGTTTCTATA+AGG | 0.322734 | 8.1:+16090711 | MS.gene044447:CDS |
| GATGTTGATGATGATGAAAT+TGG | 0.336996 | 8.1:+16091720 | MS.gene044447:CDS |
| CCTGATTTGACGAGCTTGTC+AGG | 0.337742 | 8.1:-16090490 | None:intergenic |
| TGGCGTTGAGGTTGATGATT+TGG | 0.350362 | 8.1:+16091458 | MS.gene044447:CDS |
| GTTAGACAGGCTCCTCTTAT+GGG | 0.353059 | 8.1:+16090811 | MS.gene044447:CDS |
| AACCTCCGCGACTTCCTATT+CGG | 0.359713 | 8.1:-16090943 | None:intergenic |
| AAGAACTCCGATCAGCTTAC+CGG | 0.367180 | 8.1:+16090446 | MS.gene044447:CDS |
| GGGCTTGTGTGTTGAAGCAC+TGG | 0.368221 | 8.1:-16091784 | None:intergenic |
| GATGGAGGAAGAGAATAATA+AGG | 0.374112 | 8.1:+16090966 | MS.gene044447:CDS |
| TAGGAAGTCGCGGAGGTTGA+TGG | 0.374440 | 8.1:+16090948 | MS.gene044447:CDS |
| ATGTTGATGATGATGAAATT+GGG | 0.378497 | 8.1:+16091721 | MS.gene044447:CDS |
| CCTGACAAGCTCGTCAAATC+AGG | 0.380161 | 8.1:+16090490 | MS.gene044447:CDS |
| TAAGCTGATCGGAGTTCTTC+CGG | 0.384438 | 8.1:-16090442 | None:intergenic |
| TCATCAACCTTAGCCCAATC+AGG | 0.385687 | 8.1:-16091183 | None:intergenic |
| CTGAAACTGAGCGGTGGCTT+CGG | 0.388334 | 8.1:-16090524 | None:intergenic |
| GAAGGAGAGGAAGAGGAAGT+TGG | 0.396116 | 8.1:+16091122 | MS.gene044447:CDS |
| AGGAGGAGAAGGAGAGGAAG+AGG | 0.399336 | 8.1:+16091115 | MS.gene044447:CDS |
| TCGTACCAAGCTCGTTCCTT+TGG | 0.399711 | 8.1:-16090580 | None:intergenic |
| GAAGAAGATTTCAAATCAAC+CGG | 0.408421 | 8.1:+16092091 | MS.gene044447:CDS |
| TGGCTTATGAGGAGCCTGAT+TGG | 0.409460 | 8.1:+16091169 | MS.gene044447:CDS |
| GAAACTAATGTGCCTACTAA+TGG | 0.414627 | 8.1:+16091942 | MS.gene044447:CDS |
| GGTGAGGAGGAAGGCGAAGA+GGG | 0.422169 | 8.1:+16090987 | MS.gene044447:CDS |
| TAAGAGAGTGATTGATATGA+AGG | 0.428180 | 8.1:+16091059 | MS.gene044447:CDS |
| TTCTCACTCTCAATTTGAGT+TGG | 0.428513 | 8.1:-16091822 | None:intergenic |
| GGAGAAAGTTGCTGAGTTCA+AGG | 0.429185 | 8.1:+16091341 | MS.gene044447:CDS |
| ATCCGAAAACCCCGAAAATA+CGG | 0.430044 | 8.1:-16090689 | None:intergenic |
| TAGTCCTTATGCGCAGGTTA+CGG | 0.433863 | 8.1:+16090843 | MS.gene044447:CDS |
| AGGGATTGATTCTGTTAGAC+AGG | 0.434136 | 8.1:+16090798 | MS.gene044447:CDS |
| GAAGTTGGAGATGGAGAGGA+AGG | 0.434700 | 8.1:+16091137 | MS.gene044447:CDS |
| TTCGAGGAAAATGAGGATAA+TGG | 0.435391 | 8.1:+16092035 | MS.gene044447:CDS |
| GCAGAAGACGAGAGTGCAAA+TGG | 0.435707 | 8.1:+16091510 | MS.gene044447:CDS |
| GGAGAGGGCTATGGCTTATG+AGG | 0.439385 | 8.1:+16091158 | MS.gene044447:CDS |
| AAAGCCGTAACCTGCGCATA+AGG | 0.439715 | 8.1:-16090847 | None:intergenic |
| AGAAGTTGAGGATTTGTATG+AGG | 0.441764 | 8.1:+16091209 | MS.gene044447:CDS |
| AACCTTATAGAAACCCTTAC+CGG | 0.442360 | 8.1:-16090713 | None:intergenic |
| ATGCGATGGCAGGTCCGAAT+AGG | 0.442745 | 8.1:+16090929 | MS.gene044447:CDS |
| CGATGCCACTACGAAGTTCT+CGG | 0.443193 | 8.1:+16090400 | MS.gene044447:CDS |
| GGCTTATGAGGAGCCTGATT+GGG | 0.449241 | 8.1:+16091170 | MS.gene044447:CDS |
| GAAGAAGAAAGAGGAGGAGA+AGG | 0.462080 | 8.1:+16091104 | MS.gene044447:CDS |
| TTCTCATATTTGCCATTAGT+AGG | 0.462771 | 8.1:-16091954 | None:intergenic |
| TGGTATCTGGGCACAAGGGC+CGG | 0.463969 | 8.1:+16091664 | MS.gene044447:CDS |
| CGAGCTTGTCAGGGTGGCGT+TGG | 0.466381 | 8.1:-16090480 | None:intergenic |
| AGTTTAAGAGTGAGAAGCAA+TGG | 0.469035 | 8.1:+16091289 | MS.gene044447:CDS |
| GAAGGTGAAAGTGAAGGGGT+TGG | 0.476024 | 8.1:+16091408 | MS.gene044447:CDS |
| CTATCCAAATTCCCCATAAG+AGG | 0.477965 | 8.1:-16090823 | None:intergenic |
| GAATGATGGGGTTGGTGCTA+TGG | 0.478029 | 8.1:+16091848 | MS.gene044447:CDS |
| GTCTAGTTCCCAATATTTCG+AGG | 0.480169 | 8.1:+16092019 | MS.gene044447:CDS |
| CCAATATTTCGAGGAAAATG+AGG | 0.482316 | 8.1:+16092028 | MS.gene044447:CDS |
| GTTCTTGAAGCAATGCTGGC+TGG | 0.482368 | 8.1:+16091744 | MS.gene044447:CDS |
| TGGGGTTCTTGAAGCAATGC+TGG | 0.483544 | 8.1:+16091740 | MS.gene044447:CDS |
| GAGGAAGAGGAAGTTGGAGA+TGG | 0.484765 | 8.1:+16091128 | MS.gene044447:CDS |
| GAATAATAAGGTGAGGAGGA+AGG | 0.491971 | 8.1:+16090978 | MS.gene044447:CDS |
| AGTTGGAGTTTCAGAAGCCT+CGG | 0.497718 | 8.1:-16091805 | None:intergenic |
| CAGTTGTCATGGCACAATAC+AGG | 0.497979 | 8.1:-16092219 | None:intergenic |
| TCATTGTCACCATCATCATT+CGG | 0.500186 | 8.1:-16091540 | None:intergenic |
| GGCTTGTGTGTTGAAGCACT+GGG | 0.501875 | 8.1:-16091783 | None:intergenic |
| CAGAAGACGAGAGTGCAAAT+GGG | 0.506677 | 8.1:+16091511 | MS.gene044447:CDS |
| AGAAAGAGGAGGAGAAGGAG+AGG | 0.506886 | 8.1:+16091109 | MS.gene044447:CDS |
| AGAGGAAGTTGGAGATGGAG+AGG | 0.510470 | 8.1:+16091133 | MS.gene044447:CDS |
| GCACAATACAGGAACAGAAC+AGG | 0.510659 | 8.1:-16092208 | None:intergenic |
| ACGAGGAAGGTGAAAGTGAA+GGG | 0.517150 | 8.1:+16091403 | MS.gene044447:CDS |
| GACGAGGAAGGTGAAAGTGA+AGG | 0.520922 | 8.1:+16091402 | MS.gene044447:CDS |
| GAGAGTGAGAATGAGAATGA+TGG | 0.521962 | 8.1:+16091834 | MS.gene044447:CDS |
| GTTTGAGAAGAAAGATGAGA+AGG | 0.522115 | 8.1:+16091239 | MS.gene044447:CDS |
| TGAGCAGAGTAAGAAGCATA+AGG | 0.522481 | 8.1:+16091320 | MS.gene044447:CDS |
| TGGAGATGGAGAGGAAGGAG+AGG | 0.522737 | 8.1:+16091142 | MS.gene044447:CDS |
| GGTTGATGAAGAAGAAGTTG+AGG | 0.524241 | 8.1:+16091197 | MS.gene044447:CDS |
| CGAAGCAACAATGGCATCGA+CGG | 0.524518 | 8.1:+16090372 | None:intergenic |
| CATTCTCATCAAAATCAAAC+CGG | 0.526287 | 8.1:-16091683 | None:intergenic |
| TGGATCAGAGAGTACCTCAT+AGG | 0.527619 | 8.1:-16090560 | None:intergenic |
| CGAGTTTCCGGTAAGCTGAT+CGG | 0.532549 | 8.1:-16090453 | None:intergenic |
| ATTAGACTTTGAATTTGGAT+CGG | 0.533157 | 8.1:-16090629 | None:intergenic |
| TGAGGAGCCTGATTGGGCTA+AGG | 0.533690 | 8.1:+16091176 | MS.gene044447:CDS |
| AGGTGAGGAGGAAGGCGAAG+AGG | 0.534213 | 8.1:+16090986 | MS.gene044447:CDS |
| TTCTTGAAACAATGGTATCT+GGG | 0.534518 | 8.1:+16091652 | MS.gene044447:CDS |
| GGTGAAGAAGAATTTGGAGA+TGG | 0.534575 | 8.1:+16091080 | MS.gene044447:CDS |
| AGAGTGAGAATGAGAATGAT+GGG | 0.534818 | 8.1:+16091835 | MS.gene044447:CDS |
| AGAGGAAAGATTAGAAAGTG+AGG | 0.536511 | 8.1:+16091431 | MS.gene044447:CDS |
| GGAGAGGAAGGAGAGGGCTA+TGG | 0.537823 | 8.1:+16091149 | MS.gene044447:CDS |
| AGAGGAGTTAGAAGCTGAAG+TGG | 0.540411 | 8.1:+16091380 | MS.gene044447:CDS |
| GGAGATGGAGAAGAAGAAAG+AGG | 0.547787 | 8.1:+16091095 | MS.gene044447:CDS |
| TTGAATTTGGATCGGAGAAG+AGG | 0.548637 | 8.1:-16090621 | None:intergenic |
| AATGTAATCAATATTGGAGA+TGG | 0.550622 | 8.1:+16091978 | MS.gene044447:CDS |
| GATGAGTATGATGCGATGGC+AGG | 0.551327 | 8.1:+16090919 | MS.gene044447:CDS |
| CTGATCCAAAGGAACGAGCT+TGG | 0.552512 | 8.1:+16090575 | MS.gene044447:CDS |
| GGAGATGGAGAGGAAGGAGA+GGG | 0.552905 | 8.1:+16091143 | MS.gene044447:CDS |
| AGATTAGAAAGTGAGGAGGA+TGG | 0.553099 | 8.1:+16091438 | MS.gene044447:CDS |
| GAAGAGGATTTGAGAACGAT+GGG | 0.554440 | 8.1:-16090605 | None:intergenic |
| GAGCAAAGAAAGAGAAGCGT+GGG | 0.554866 | 8.1:+16091907 | MS.gene044447:CDS |
| TGAAAGTGAAGGGGTTGGAG+AGG | 0.556578 | 8.1:+16091413 | MS.gene044447:CDS |
| GTTGGAGTTTCAGAAGCCTC+GGG | 0.557564 | 8.1:-16091804 | None:intergenic |
| AGAAGAGGATTTGAGAACGA+TGG | 0.558151 | 8.1:-16090606 | None:intergenic |
| AAGTGAGGAGGATGGCGTTG+AGG | 0.564644 | 8.1:+16091446 | MS.gene044447:CDS |
| GTTAGAAGCTGAAGTGGACG+AGG | 0.565424 | 8.1:+16091386 | MS.gene044447:CDS |
| CGAAAACAGGTCAGGGACAA+CGG | 0.566006 | 8.1:-16090653 | None:intergenic |
| TTTGGATAGTCCTTATGCGC+AGG | 0.567782 | 8.1:+16090837 | MS.gene044447:CDS |
| AACAATGGTATCTGGGCACA+AGG | 0.568483 | 8.1:+16091659 | MS.gene044447:CDS |
| AAGAGAATAATAAGGTGAGG+AGG | 0.569009 | 8.1:+16090974 | MS.gene044447:CDS |
| TCTACCTCGCGAATGCTCAC+CGG | 0.571563 | 8.1:+16090423 | MS.gene044447:CDS |
| CTGATTTGACGAGCTTGTCA+GGG | 0.572375 | 8.1:-16090489 | None:intergenic |
| GGATTCACTTGATGATGAAG+AGG | 0.574101 | 8.1:+16091362 | MS.gene044447:CDS |
| GGAGCTACAACACGCCTATG+AGG | 0.575033 | 8.1:+16090546 | MS.gene044447:CDS |
| CGGTGGCTTCGGATTGAGAG+AGG | 0.580013 | 8.1:-16090513 | None:intergenic |
| GGAAAGATTAGAAAGTGAGG+AGG | 0.583975 | 8.1:+16091434 | MS.gene044447:CDS |
| CGACGATGTTCTTGAAACAA+TGG | 0.586211 | 8.1:+16091644 | MS.gene044447:CDS |
| GGGGTTGAGCCGAATGATGA+TGG | 0.597019 | 8.1:+16091531 | MS.gene044447:CDS |
| AGGAAGAGAATAATAAGGTG+AGG | 0.601773 | 8.1:+16090971 | MS.gene044447:CDS |
| CGGTAAAGAGAATGAGCAGG+TGG | 0.606870 | 8.1:+16092058 | MS.gene044447:CDS |
| TGAGGTACTCTCTGATCCAA+AGG | 0.607381 | 8.1:+16090564 | MS.gene044447:CDS |
| GGCGGATGAGTATGATGCGA+TGG | 0.610486 | 8.1:+16090915 | MS.gene044447:CDS |
| CGAGGAAGGTGAAAGTGAAG+GGG | 0.611247 | 8.1:+16091404 | MS.gene044447:CDS |
| TTAGACAGGCTCCTCTTATG+GGG | 0.611836 | 8.1:+16090812 | MS.gene044447:CDS |
| TAATGATACTGTGAGAAAGT+TGG | 0.612128 | 8.1:+16091014 | MS.gene044447:CDS |
| TGGCGGTAAAGAGAATGAGC+AGG | 0.613961 | 8.1:+16092055 | MS.gene044447:CDS |
| GAAGCTGAAGTGGACGAGGA+AGG | 0.614178 | 8.1:+16091390 | MS.gene044447:CDS |
| TGTTGATGATGATGAAATTG+GGG | 0.621284 | 8.1:+16091722 | MS.gene044447:CDS |
| GAGAATGAGAATGATGGGGT+TGG | 0.635119 | 8.1:+16091840 | MS.gene044447:CDS |
| ATTTGACGAGCTTGTCAGGG+TGG | 0.643119 | 8.1:-16090486 | None:intergenic |
| GATGGAGAAGAAGAAAGAGG+AGG | 0.648465 | 8.1:+16091098 | MS.gene044447:CDS |
| AGAAGACGAGAGTGCAAATG+GGG | 0.651811 | 8.1:+16091512 | MS.gene044447:CDS |
| TGCTGAGCATGCAGAAGATG+AGG | 0.654863 | 8.1:+16091575 | MS.gene044447:CDS |
| AGAGCAAAGAAAGAGAAGCG+TGG | 0.655964 | 8.1:+16091906 | MS.gene044447:CDS |
| TGCTTCAACACACAAGCCCG+AGG | 0.660773 | 8.1:+16091788 | MS.gene044447:CDS |
| TAGCTCCTGAAACTGAGCGG+TGG | 0.662261 | 8.1:-16090530 | None:intergenic |
| CAGGTCCGAATAGGAAGTCG+CGG | 0.662770 | 8.1:+16090938 | MS.gene044447:CDS |
| GAAGTCGCGGAGGTTGATGG+AGG | 0.669800 | 8.1:+16090951 | MS.gene044447:CDS |
| AGATCAAAACTTTCAACCAG+AGG | 0.672866 | 8.1:+16092149 | MS.gene044447:CDS |
| ACAATGGTATCTGGGCACAA+GGG | 0.680825 | 8.1:+16091660 | MS.gene044447:CDS |
| TCTTCCGGTGAGCATTCGCG+AGG | 0.687306 | 8.1:-16090427 | None:intergenic |
| GGTAAAGAGAATGAGCAGGT+GGG | 0.690040 | 8.1:+16092059 | MS.gene044447:CDS |
| GAGGAAAATGAGGATAATGG+CGG | 0.690575 | 8.1:+16092038 | MS.gene044447:CDS |
| GAGTGAGAATGAGAATGATG+GGG | 0.711594 | 8.1:+16091836 | MS.gene044447:CDS |
| GTCCGAATAGGAAGTCGCGG+AGG | 0.733839 | 8.1:+16090941 | MS.gene044447:CDS |
| GTAGACCGAGAACTTCGTAG+TGG | 0.735555 | 8.1:-16090405 | None:intergenic |
| TTGTAGCTCCTGAAACTGAG+CGG | 0.736164 | 8.1:-16090533 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTCATAAAAACATACATT+TGG | - | chr8.1:16092182-16092201 | None:intergenic | 15.0% |
| !!! | ATTAATTTTGCTAAGAAATT+AGG | + | chr8.1:16090772-16090791 | MS.gene044447:CDS | 15.0% |
| ! | AATGTAATCAATATTGGAGA+TGG | + | chr8.1:16091978-16091997 | MS.gene044447:CDS | 25.0% |
| ! | ATTAGACTTTGAATTTGGAT+CGG | - | chr8.1:16090632-16090651 | None:intergenic | 25.0% |
| ! | GAGAAGAATGTAATCAATAT+TGG | + | chr8.1:16091972-16091991 | MS.gene044447:CDS | 25.0% |
| ! | TGATGTGTTTGATAAAATTC+AGG | + | chr8.1:16090741-16090760 | MS.gene044447:CDS | 25.0% |
| ! | TTGCTAAGAAATTAGGTTTA+GGG | + | chr8.1:16090779-16090798 | MS.gene044447:CDS | 25.0% |
| ! | TTTGCTAAGAAATTAGGTTT+AGG | + | chr8.1:16090778-16090797 | MS.gene044447:CDS | 25.0% |
| !! | TTACGGCTTTTTATAGTTAT+TGG | + | chr8.1:16090860-16090879 | MS.gene044447:CDS | 25.0% |
| !!! | ATGTTGATGATGATGAAATT+GGG | + | chr8.1:16091721-16091740 | MS.gene044447:CDS | 25.0% |
| !!! | GCTTTTTATAGTTATTGGTT+GGG | + | chr8.1:16090865-16090884 | MS.gene044447:CDS | 25.0% |
| !!! | TTTGATTTTGATGAGAATGA+TGG | + | chr8.1:16091687-16091706 | MS.gene044447:CDS | 25.0% |
| ACGGAATTAGACTTTGAATT+TGG | - | chr8.1:16090637-16090656 | None:intergenic | 30.0% | |
| CATTCTCATCAAAATCAAAC+CGG | - | chr8.1:16091686-16091705 | None:intergenic | 30.0% | |
| GAAGAAGATTTCAAATCAAC+CGG | + | chr8.1:16092091-16092110 | MS.gene044447:CDS | 30.0% | |
| TAAGAGAGTGATTGATATGA+AGG | + | chr8.1:16091059-16091078 | MS.gene044447:CDS | 30.0% | |
| TAATGATACTGTGAGAAAGT+TGG | + | chr8.1:16091014-16091033 | MS.gene044447:CDS | 30.0% | |
| TATGAAGGTGAAGAAGAATT+TGG | + | chr8.1:16091074-16091093 | MS.gene044447:CDS | 30.0% | |
| TATTCGAGAAAAACGAAAAC+AGG | - | chr8.1:16090669-16090688 | None:intergenic | 30.0% | |
| TTCTCATATTTGCCATTAGT+AGG | - | chr8.1:16091957-16091976 | None:intergenic | 30.0% | |
| TTCTTGAAACAATGGTATCT+GGG | + | chr8.1:16091652-16091671 | MS.gene044447:CDS | 30.0% | |
| ! | CTCATTTTCCTCGAAATATT+GGG | - | chr8.1:16092030-16092049 | None:intergenic | 30.0% |
| ! | GACTGTTATGGATTTTTGTT+GGG | + | chr8.1:16090894-16090913 | MS.gene044447:CDS | 30.0% |
| ! | GGCTTTTTATAGTTATTGGT+TGG | + | chr8.1:16090864-16090883 | MS.gene044447:CDS | 30.0% |
| ! | TTTCTCGAATACCGTATTTT+CGG | + | chr8.1:16090678-16090697 | MS.gene044447:CDS | 30.0% |
| !! | AATCAACCGGTTGATAAAAA+AGG | + | chr8.1:16092104-16092123 | MS.gene044447:CDS | 30.0% |
| !! | GATGTTGATGATGATGAAAT+TGG | + | chr8.1:16091720-16091739 | MS.gene044447:CDS | 30.0% |
| !! | TGTTGATGATGATGAAATTG+GGG | + | chr8.1:16091722-16091741 | MS.gene044447:CDS | 30.0% |
| !!! | AGTTTTATTGTGTGTTGTGT+GGG | + | chr8.1:16091262-16091281 | MS.gene044447:CDS | 30.0% |
| !!! | GAAGTTCCTTTTTTATCAAC+CGG | - | chr8.1:16092113-16092132 | None:intergenic | 30.0% |
| !!! | GTTTCTTTTTTGCAGGTTTT+CGG | - | chr8.1:16091884-16091903 | None:intergenic | 30.0% |
| AACCTTATAGAAACCCTTAC+CGG | - | chr8.1:16090716-16090735 | None:intergenic | 35.0% | |
| AAGAGAATAATAAGGTGAGG+AGG | + | chr8.1:16090974-16090993 | MS.gene044447:CDS | 35.0% | |
| AGAAAAACGAAAACAGGTCA+GGG | - | chr8.1:16090663-16090682 | None:intergenic | 35.0% | |
| AGAAGTTGAGGATTTGTATG+AGG | + | chr8.1:16091209-16091228 | MS.gene044447:CDS | 35.0% | |
| AGAGGAAAGATTAGAAAGTG+AGG | + | chr8.1:16091431-16091450 | MS.gene044447:CDS | 35.0% | |
| AGAGTGAGAATGAGAATGAT+GGG | + | chr8.1:16091835-16091854 | MS.gene044447:CDS | 35.0% | |
| AGATCAAAACTTTCAACCAG+AGG | + | chr8.1:16092149-16092168 | MS.gene044447:CDS | 35.0% | |
| AGGAAGAGAATAATAAGGTG+AGG | + | chr8.1:16090971-16090990 | MS.gene044447:CDS | 35.0% | |
| AGTTTAAGAGTGAGAAGCAA+TGG | + | chr8.1:16091289-16091308 | MS.gene044447:CDS | 35.0% | |
| CCAATATTTCGAGGAAAATG+AGG | + | chr8.1:16092028-16092047 | MS.gene044447:CDS | 35.0% | |
| GAAACTAATGTGCCTACTAA+TGG | + | chr8.1:16091942-16091961 | MS.gene044447:CDS | 35.0% | |
| GATGGAGGAAGAGAATAATA+AGG | + | chr8.1:16090966-16090985 | MS.gene044447:CDS | 35.0% | |
| GTTCTTGAAACAATGGTATC+TGG | + | chr8.1:16091651-16091670 | MS.gene044447:CDS | 35.0% | |
| GTTTGAGAAGAAAGATGAGA+AGG | + | chr8.1:16091239-16091258 | MS.gene044447:CDS | 35.0% | |
| TCATTGTCACCATCATCATT+CGG | - | chr8.1:16091543-16091562 | None:intergenic | 35.0% | |
| TTCGAGGAAAATGAGGATAA+TGG | + | chr8.1:16092035-16092054 | MS.gene044447:CDS | 35.0% | |
| TTCTCACTCTCAATTTGAGT+TGG | - | chr8.1:16091825-16091844 | None:intergenic | 35.0% | |
| ! | CCTCATTTTCCTCGAAATAT+TGG | - | chr8.1:16092031-16092050 | None:intergenic | 35.0% |
| ! | CGACTGTTATGGATTTTTGT+TGG | + | chr8.1:16090893-16090912 | MS.gene044447:CDS | 35.0% |
| ! | TGTTATGGATTTTTGTTGGG+CGG | + | chr8.1:16090897-16090916 | MS.gene044447:CDS | 35.0% |
| ! | TTCTCGAATACCGTATTTTC+GGG | + | chr8.1:16090679-16090698 | MS.gene044447:CDS | 35.0% |
| !! | CTGGTTGAAAGTTTTGATCT+GGG | - | chr8.1:16092149-16092168 | None:intergenic | 35.0% |
| !! | TCTGGTTGAAAGTTTTGATC+TGG | - | chr8.1:16092150-16092169 | None:intergenic | 35.0% |
| !!! | GAGTTTTATTGTGTGTTGTG+TGG | + | chr8.1:16091261-16091280 | MS.gene044447:CDS | 35.0% |
| !!! | TACATTTGGTTTTCTTCCTC+TGG | - | chr8.1:16092168-16092187 | None:intergenic | 35.0% |
| AGAAGAGGATTTGAGAACGA+TGG | - | chr8.1:16090609-16090628 | None:intergenic | 40.0% | |
| AGATTAGAAAGTGAGGAGGA+TGG | + | chr8.1:16091438-16091457 | MS.gene044447:CDS | 40.0% | |
| ATCCGAAAACCCCGAAAATA+CGG | - | chr8.1:16090692-16090711 | None:intergenic | 40.0% | |
| CGACGATGTTCTTGAAACAA+TGG | + | chr8.1:16091644-16091663 | MS.gene044447:CDS | 40.0% | |
| CTATCCAAATTCCCCATAAG+AGG | - | chr8.1:16090826-16090845 | None:intergenic | 40.0% | |
| GAAGAGGATTTGAGAACGAT+GGG | - | chr8.1:16090608-16090627 | None:intergenic | 40.0% | |
| GAATAATAAGGTGAGGAGGA+AGG | + | chr8.1:16090978-16090997 | MS.gene044447:CDS | 40.0% | |
| GAGAAAAACGAAAACAGGTC+AGG | - | chr8.1:16090664-16090683 | None:intergenic | 40.0% | |
| GAGAGTGAGAATGAGAATGA+TGG | + | chr8.1:16091834-16091853 | MS.gene044447:CDS | 40.0% | |
| GAGTGAGAATGAGAATGATG+GGG | + | chr8.1:16091836-16091855 | MS.gene044447:CDS | 40.0% | |
| GGAAAGATTAGAAAGTGAGG+AGG | + | chr8.1:16091434-16091453 | MS.gene044447:CDS | 40.0% | |
| GGTGAAGAAGAATTTGGAGA+TGG | + | chr8.1:16091080-16091099 | MS.gene044447:CDS | 40.0% | |
| TTCCGGTAAGGGTTTCTATA+AGG | + | chr8.1:16090711-16090730 | MS.gene044447:CDS | 40.0% | |
| TTGAATTTGGATCGGAGAAG+AGG | - | chr8.1:16090624-16090643 | None:intergenic | 40.0% | |
| ! | AAAGAGAAGCGTGGGAAAAA+TGG | + | chr8.1:16091915-16091934 | MS.gene044447:CDS | 40.0% |
| ! | AAGAGAAGCGTGGGAAAAAT+GGG | + | chr8.1:16091916-16091935 | MS.gene044447:CDS | 40.0% |
| ! | AGGGATTGATTCTGTTAGAC+AGG | + | chr8.1:16090798-16090817 | MS.gene044447:CDS | 40.0% |
| ! | GAGGAAAATGAGGATAATGG+CGG | + | chr8.1:16092038-16092057 | MS.gene044447:CDS | 40.0% |
| ! | GTCTAGTTCCCAATATTTCG+AGG | + | chr8.1:16092019-16092038 | MS.gene044447:CDS | 40.0% |
| ! | GTTGGGATTTTCGACTGTTA+TGG | + | chr8.1:16090882-16090901 | MS.gene044447:CDS | 40.0% |
| ! | TCTCGAATACCGTATTTTCG+GGG | + | chr8.1:16090680-16090699 | MS.gene044447:CDS | 40.0% |
| ! | TGAGCAGAGTAAGAAGCATA+AGG | + | chr8.1:16091320-16091339 | MS.gene044447:CDS | 40.0% |
| !! | GGATTCACTTGATGATGAAG+AGG | + | chr8.1:16091362-16091381 | MS.gene044447:CDS | 40.0% |
| !! | GGCTGATTTTGTGAAGAAGA+GGG | + | chr8.1:16091035-16091054 | MS.gene044447:CDS | 40.0% |
| !! | GGTTGATGAAGAAGAAGTTG+AGG | + | chr8.1:16091197-16091216 | MS.gene044447:CDS | 40.0% |
| !! | TACCGTATTTTCGGGGTTTT+CGG | + | chr8.1:16090687-16090706 | MS.gene044447:CDS | 40.0% |
| !! | TGGCTGATTTTGTGAAGAAG+AGG | + | chr8.1:16091034-16091053 | MS.gene044447:CDS | 40.0% |
| !!! | GCTCTACGTTTCTTTTTTGC+AGG | - | chr8.1:16091891-16091910 | None:intergenic | 40.0% |
| AACAATGGTATCTGGGCACA+AGG | + | chr8.1:16091659-16091678 | MS.gene044447:CDS | 45.0% | |
| AAGAACTCCGATCAGCTTAC+CGG | + | chr8.1:16090446-16090465 | MS.gene044447:CDS | 45.0% | |
| ACAATGGTATCTGGGCACAA+GGG | + | chr8.1:16091660-16091679 | MS.gene044447:CDS | 45.0% | |
| ACGAGGAAGGTGAAAGTGAA+GGG | + | chr8.1:16091403-16091422 | MS.gene044447:CDS | 45.0% | |
| AGAGCAAAGAAAGAGAAGCG+TGG | + | chr8.1:16091906-16091925 | MS.gene044447:CDS | 45.0% | |
| AGAGGAGTTAGAAGCTGAAG+TGG | + | chr8.1:16091380-16091399 | MS.gene044447:CDS | 45.0% | |
| AGTTGGAGTTTCAGAAGCCT+CGG | - | chr8.1:16091808-16091827 | None:intergenic | 45.0% | |
| GAAGAAGAAAGAGGAGGAGA+AGG | + | chr8.1:16091104-16091123 | MS.gene044447:CDS | 45.0% | |
| GATGGAGAAGAAGAAAGAGG+AGG | + | chr8.1:16091098-16091117 | MS.gene044447:CDS | 45.0% | |
| GCACAATACAGGAACAGAAC+AGG | - | chr8.1:16092211-16092230 | None:intergenic | 45.0% | |
| GGAGAAAGTTGCTGAGTTCA+AGG | + | chr8.1:16091341-16091360 | MS.gene044447:CDS | 45.0% | |
| GGAGATGGAGAAGAAGAAAG+AGG | + | chr8.1:16091095-16091114 | MS.gene044447:CDS | 45.0% | |
| GGTAAAGAGAATGAGCAGGT+GGG | + | chr8.1:16092059-16092078 | MS.gene044447:CDS | 45.0% | |
| GTTAGACAGGCTCCTCTTAT+GGG | + | chr8.1:16090811-16090830 | MS.gene044447:CDS | 45.0% | |
| TAAGCTGATCGGAGTTCTTC+CGG | - | chr8.1:16090445-16090464 | None:intergenic | 45.0% | |
| TAGTCCTTATGCGCAGGTTA+CGG | + | chr8.1:16090843-16090862 | MS.gene044447:CDS | 45.0% | |
| TCATCAACCTTAGCCCAATC+AGG | - | chr8.1:16091186-16091205 | None:intergenic | 45.0% | |
| TGTTAGACAGGCTCCTCTTA+TGG | + | chr8.1:16090810-16090829 | MS.gene044447:CDS | 45.0% | |
| TTAGACAGGCTCCTCTTATG+GGG | + | chr8.1:16090812-16090831 | MS.gene044447:CDS | 45.0% | |
| TTGTAGCTCCTGAAACTGAG+CGG | - | chr8.1:16090536-16090555 | None:intergenic | 45.0% | |
| TTTGGATAGTCCTTATGCGC+AGG | + | chr8.1:16090837-16090856 | MS.gene044447:CDS | 45.0% | |
| ! | AGAAGACGAGAGTGCAAATG+GGG | + | chr8.1:16091512-16091531 | MS.gene044447:CDS | 45.0% |
| ! | AGAGAAGCGTGGGAAAAATG+GGG | + | chr8.1:16091917-16091936 | MS.gene044447:CDS | 45.0% |
| ! | CAGAAGACGAGAGTGCAAAT+GGG | + | chr8.1:16091511-16091530 | MS.gene044447:CDS | 45.0% |
| ! | CTGATTTGACGAGCTTGTCA+GGG | - | chr8.1:16090492-16090511 | None:intergenic | 45.0% |
| ! | GAGAATGAGAATGATGGGGT+TGG | + | chr8.1:16091840-16091859 | MS.gene044447:CDS | 45.0% |
| ! | GAGCAAAGAAAGAGAAGCGT+GGG | + | chr8.1:16091907-16091926 | MS.gene044447:CDS | 45.0% |
| ! | TGAGGTACTCTCTGATCCAA+AGG | + | chr8.1:16090564-16090583 | MS.gene044447:CDS | 45.0% |
| !! | TGGATCAGAGAGTACCTCAT+AGG | - | chr8.1:16090563-16090582 | None:intergenic | 45.0% |
| !! | TGGCGTTGAGGTTGATGATT+TGG | + | chr8.1:16091458-16091477 | MS.gene044447:CDS | 45.0% |
| !! | TTTTCGGGGTTTTCGGATTC+CGG | + | chr8.1:16090694-16090713 | MS.gene044447:CDS | 45.0% |
| AAAGCCGTAACCTGCGCATA+AGG | - | chr8.1:16090850-16090869 | None:intergenic | 50.0% | |
| AACCTCCGCGACTTCCTATT+CGG | - | chr8.1:16090946-16090965 | None:intergenic | 50.0% | |
| AGAAAGAGGAGGAGAAGGAG+AGG | + | chr8.1:16091109-16091128 | MS.gene044447:CDS | 50.0% | |
| AGAGGAAGTTGGAGATGGAG+AGG | + | chr8.1:16091133-16091152 | MS.gene044447:CDS | 50.0% | |
| ATTTGACGAGCTTGTCAGGG+TGG | - | chr8.1:16090489-16090508 | None:intergenic | 50.0% | |
| CCTGACAAGCTCGTCAAATC+AGG | + | chr8.1:16090490-16090509 | MS.gene044447:CDS | 50.0% | |
| CGAAAACAGGTCAGGGACAA+CGG | - | chr8.1:16090656-16090675 | None:intergenic | 50.0% | |
| CGAGGAAGGTGAAAGTGAAG+GGG | + | chr8.1:16091404-16091423 | MS.gene044447:CDS | 50.0% | |
| CGAGTTTCCGGTAAGCTGAT+CGG | - | chr8.1:16090456-16090475 | None:intergenic | 50.0% | |
| CGATGCCACTACGAAGTTCT+CGG | + | chr8.1:16090400-16090419 | MS.gene044447:CDS | 50.0% | |
| CGGTAAAGAGAATGAGCAGG+TGG | + | chr8.1:16092058-16092077 | MS.gene044447:CDS | 50.0% | |
| CTGATCCAAAGGAACGAGCT+TGG | + | chr8.1:16090575-16090594 | MS.gene044447:CDS | 50.0% | |
| GAAGGAGAGGAAGAGGAAGT+TGG | + | chr8.1:16091122-16091141 | MS.gene044447:CDS | 50.0% | |
| GAAGGTGAAAGTGAAGGGGT+TGG | + | chr8.1:16091408-16091427 | MS.gene044447:CDS | 50.0% | |
| GAAGTTGGAGATGGAGAGGA+AGG | + | chr8.1:16091137-16091156 | MS.gene044447:CDS | 50.0% | |
| GACGAGGAAGGTGAAAGTGA+AGG | + | chr8.1:16091402-16091421 | MS.gene044447:CDS | 50.0% | |
| GAGGAAGAGGAAGTTGGAGA+TGG | + | chr8.1:16091128-16091147 | MS.gene044447:CDS | 50.0% | |
| GATGAGTATGATGCGATGGC+AGG | + | chr8.1:16090919-16090938 | MS.gene044447:CDS | 50.0% | |
| GGCTCCTCTTATGGGGAATT+TGG | + | chr8.1:16090819-16090838 | MS.gene044447:CDS | 50.0% | |
| GGCTTATGAGGAGCCTGATT+GGG | + | chr8.1:16091170-16091189 | MS.gene044447:CDS | 50.0% | |
| GTAGACCGAGAACTTCGTAG+TGG | - | chr8.1:16090408-16090427 | None:intergenic | 50.0% | |
| GTTAGAAGCTGAAGTGGACG+AGG | + | chr8.1:16091386-16091405 | MS.gene044447:CDS | 50.0% | |
| GTTCTTGAAGCAATGCTGGC+TGG | + | chr8.1:16091744-16091763 | MS.gene044447:CDS | 50.0% | |
| GTTGGAGTTTCAGAAGCCTC+GGG | - | chr8.1:16091807-16091826 | None:intergenic | 50.0% | |
| TCGTACCAAGCTCGTTCCTT+TGG | - | chr8.1:16090583-16090602 | None:intergenic | 50.0% | |
| TGAAAGTGAAGGGGTTGGAG+AGG | + | chr8.1:16091413-16091432 | MS.gene044447:CDS | 50.0% | |
| TGCTGAGCATGCAGAAGATG+AGG | + | chr8.1:16091575-16091594 | MS.gene044447:CDS | 50.0% | |
| TGGCGGTAAAGAGAATGAGC+AGG | + | chr8.1:16092055-16092074 | MS.gene044447:CDS | 50.0% | |
| TGGCTTATGAGGAGCCTGAT+TGG | + | chr8.1:16091169-16091188 | MS.gene044447:CDS | 50.0% | |
| TGGGGTTCTTGAAGCAATGC+TGG | + | chr8.1:16091740-16091759 | MS.gene044447:CDS | 50.0% | |
| ! | CCTGATTTGACGAGCTTGTC+AGG | - | chr8.1:16090493-16090512 | None:intergenic | 50.0% |
| ! | GCAGAAGACGAGAGTGCAAA+TGG | + | chr8.1:16091510-16091529 | MS.gene044447:CDS | 50.0% |
| ! | GGCTTGTGTGTTGAAGCACT+GGG | - | chr8.1:16091786-16091805 | None:intergenic | 50.0% |
| ! | GGGTTTTCGGATTCCGGTAA+GGG | + | chr8.1:16090700-16090719 | MS.gene044447:CDS | 50.0% |
| !! | GAATGATGGGGTTGGTGCTA+TGG | + | chr8.1:16091848-16091867 | MS.gene044447:CDS | 50.0% |
| AAGTGAGGAGGATGGCGTTG+AGG | + | chr8.1:16091446-16091465 | MS.gene044447:CDS | 55.0% | |
| AGGAGGAGAAGGAGAGGAAG+AGG | + | chr8.1:16091115-16091134 | MS.gene044447:CDS | 55.0% | |
| ATGCGATGGCAGGTCCGAAT+AGG | + | chr8.1:16090929-16090948 | MS.gene044447:CDS | 55.0% | |
| CAGGTCCGAATAGGAAGTCG+CGG | + | chr8.1:16090938-16090957 | MS.gene044447:CDS | 55.0% | |
| CTGAAACTGAGCGGTGGCTT+CGG | - | chr8.1:16090527-16090546 | None:intergenic | 55.0% | |
| GAAGCTGAAGTGGACGAGGA+AGG | + | chr8.1:16091390-16091409 | MS.gene044447:CDS | 55.0% | |
| GGAGAGGGCTATGGCTTATG+AGG | + | chr8.1:16091158-16091177 | MS.gene044447:CDS | 55.0% | |
| GGAGATGGAGAGGAAGGAGA+GGG | + | chr8.1:16091143-16091162 | MS.gene044447:CDS | 55.0% | |
| GGAGCTACAACACGCCTATG+AGG | + | chr8.1:16090546-16090565 | MS.gene044447:CDS | 55.0% | |
| GGCGGATGAGTATGATGCGA+TGG | + | chr8.1:16090915-16090934 | MS.gene044447:CDS | 55.0% | |
| GGGCTTGTGTGTTGAAGCAC+TGG | - | chr8.1:16091787-16091806 | None:intergenic | 55.0% | |
| GGGGTTGAGCCGAATGATGA+TGG | + | chr8.1:16091531-16091550 | MS.gene044447:CDS | 55.0% | |
| TAGCTCCTGAAACTGAGCGG+TGG | - | chr8.1:16090533-16090552 | None:intergenic | 55.0% | |
| TAGGAAGTCGCGGAGGTTGA+TGG | + | chr8.1:16090948-16090967 | MS.gene044447:CDS | 55.0% | |
| TCTACCTCGCGAATGCTCAC+CGG | + | chr8.1:16090423-16090442 | MS.gene044447:CDS | 55.0% | |
| TGAGGAGCCTGATTGGGCTA+AGG | + | chr8.1:16091176-16091195 | MS.gene044447:CDS | 55.0% | |
| TGCTTCAACACACAAGCCCG+AGG | + | chr8.1:16091788-16091807 | MS.gene044447:CDS | 55.0% | |
| TGGAGATGGAGAGGAAGGAG+AGG | + | chr8.1:16091142-16091161 | MS.gene044447:CDS | 55.0% | |
| ! | GGGGTTTTCGGATTCCGGTA+AGG | + | chr8.1:16090699-16090718 | MS.gene044447:CDS | 55.0% |
| AGGTGAGGAGGAAGGCGAAG+AGG | + | chr8.1:16090986-16091005 | MS.gene044447:CDS | 60.0% | |
| CGAAGCCACCGCTCAGTTTC+AGG | + | chr8.1:16090525-16090544 | MS.gene044447:CDS | 60.0% | |
| CGGTGGCTTCGGATTGAGAG+AGG | - | chr8.1:16090516-16090535 | None:intergenic | 60.0% | |
| GGAGAGGAAGGAGAGGGCTA+TGG | + | chr8.1:16091149-16091168 | MS.gene044447:CDS | 60.0% | |
| GGTGAGGAGGAAGGCGAAGA+GGG | + | chr8.1:16090987-16091006 | MS.gene044447:CDS | 60.0% | |
| GTCCGAATAGGAAGTCGCGG+AGG | + | chr8.1:16090941-16090960 | MS.gene044447:CDS | 60.0% | |
| TCTTCCGGTGAGCATTCGCG+AGG | - | chr8.1:16090430-16090449 | None:intergenic | 60.0% | |
| TGGTATCTGGGCACAAGGGC+CGG | + | chr8.1:16091664-16091683 | MS.gene044447:CDS | 60.0% | |
| ! | GGCGTTGGAGAGCGAGTTTC+CGG | - | chr8.1:16090468-16090487 | None:intergenic | 60.0% |
| !! | GAAGTCGCGGAGGTTGATGG+AGG | + | chr8.1:16090951-16090970 | MS.gene044447:CDS | 60.0% |
| CGAGCTTGTCAGGGTGGCGT+TGG | - | chr8.1:16090483-16090502 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 16090382 | 16092235 | 16090382 | ID=MS.gene044447 |
| chr8.1 | mRNA | 16090382 | 16092235 | 16090382 | ID=MS.gene044447.t1;Parent=MS.gene044447 |
| chr8.1 | exon | 16090382 | 16092235 | 16090382 | ID=MS.gene044447.t1.exon1;Parent=MS.gene044447.t1 |
| chr8.1 | CDS | 16090382 | 16092235 | 16090382 | ID=cds.MS.gene044447.t1;Parent=MS.gene044447.t1 |
| Gene Sequence |
| Protein sequence |
