Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045171.t1 | RHN69325.1 | 95.8 | 616 | 26 | 0 | 1 | 616 | 1 | 616 | 2.60E-273 | 951 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045171.t1 | Q0WPZ7 | 45.8 | 607 | 273 | 10 | 15 | 609 | 21 | 583 | 1.2e-80 | 302.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045171.t1 | G7J344 | 95.8 | 616 | 26 | 0 | 1 | 616 | 4 | 619 | 1.9e-273 | 951.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene86831 | MS.gene045171 | PPI |
MS.gene004979 | MS.gene045171 | PPI |
MS.gene065809 | MS.gene045171 | PPI |
MS.gene07517 | MS.gene045171 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045171.t1 | MTR_3g086460 | 95.942 | 616 | 25 | 0 | 1 | 616 | 4 | 619 | 0.0 | 1217 |
MS.gene045171.t1 | MTR_7g034350 | 52.941 | 187 | 44 | 3 | 431 | 616 | 4 | 147 | 6.83e-55 | 184 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045171.t1 | AT1G13120 | 42.414 | 613 | 290 | 15 | 15 | 611 | 21 | 586 | 9.48e-144 | 430 |
MS.gene045171.t1 | AT4G05523 | 31.731 | 208 | 104 | 8 | 15 | 213 | 21 | 199 | 9.71e-20 | 89.0 |
Find 118 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCGGAATATAAAGCAAATA+AGG | 0.196341 | 3.1:+69383711 | MS.gene045171:CDS |
CAAGAGAAAGGTTGCTTTGC+AGG | 0.219008 | 3.1:+69382153 | MS.gene045171:CDS |
TTCCATTGCTGCCTTTGTTT+TGG | 0.224984 | 3.1:-69382575 | None:intergenic |
CCTTGGTGTCAGTATTTAAT+AGG | 0.247209 | 3.1:-69382684 | None:intergenic |
TGTTGAGATATTAATTAAAA+AGG | 0.253115 | 3.1:+69384466 | MS.gene045171:CDS |
CCCTTATTTGCTTTATATTC+CGG | 0.260197 | 3.1:-69383712 | None:intergenic |
GACTGCAGGTTCCTTCCTTC+TGG | 0.268189 | 3.1:-69386414 | None:intergenic |
CCTTATTTGCTTTATATTCC+GGG | 0.310245 | 3.1:-69383711 | None:intergenic |
TTGTAGGGGAGCTATGAAAT+TGG | 0.312211 | 3.1:+69380437 | None:intergenic |
TACTTCCTCGGCTTTAAGTT+TGG | 0.326776 | 3.1:-69382509 | None:intergenic |
AAAGCACCTGGTTTACAAAA+AGG | 0.349016 | 3.1:+69385429 | MS.gene045171:CDS |
CAAAGAAACAAGGCAGGAAT+TGG | 0.357926 | 3.1:+69381368 | MS.gene045171:CDS |
GGTGTACGGTGCACTGGTTC+AGG | 0.362844 | 3.1:+69385912 | MS.gene045171:CDS |
AGCAAAATATCCATTACATA+TGG | 0.370046 | 3.1:-69385370 | None:intergenic |
CCGGAATATAAAGCAAATAA+GGG | 0.387902 | 3.1:+69383712 | MS.gene045171:CDS |
CTGCAAAGCAACCTTTCTCT+TGG | 0.394273 | 3.1:-69382152 | None:intergenic |
CGTCTCCGAGCTCAATGCTT+TGG | 0.394800 | 3.1:+69380518 | MS.gene045171:CDS |
AAGAAATTGAGAAAGGTAGA+AGG | 0.400427 | 3.1:+69380775 | MS.gene045171:CDS |
TTCCGATGTTGACTCTGCTT+TGG | 0.402079 | 3.1:+69381021 | MS.gene045171:CDS |
GCAGTAGTCTTCGCTGAATC+TGG | 0.404397 | 3.1:-69386348 | None:intergenic |
TTGCTGCTTCTGATCCTGAT+TGG | 0.416301 | 3.1:+69380481 | MS.gene045171:CDS |
TCGCTGTCTGTCTCATACTC+AGG | 0.418770 | 3.1:-69380813 | None:intergenic |
TCCTTCCTTCTGGCACTTGA+AGG | 0.419682 | 3.1:-69386404 | None:intergenic |
CCTCCCCAACTTTATTCATC+AGG | 0.419766 | 3.1:-69381057 | None:intergenic |
CTATTTGTGATCTGAGTTCA+CGG | 0.419778 | 3.1:-69382090 | None:intergenic |
AATAAAGTTGGGGAGGTAGA+AGG | 0.421366 | 3.1:+69381064 | MS.gene045171:CDS |
TGAATTTCTCAACTCGAAGA+AGG | 0.425487 | 3.1:-69381347 | None:intergenic |
CTACTTTGCCCGCAGATGGC+TGG | 0.429531 | 3.1:+69386231 | MS.gene045171:intron |
CTTACCTGATGAATAAAGTT+GGG | 0.433506 | 3.1:+69381053 | MS.gene045171:CDS |
CGCATGGCTTGCAAGAAGGT+TGG | 0.436683 | 3.1:+69386071 | MS.gene045171:CDS |
ATTGCAAAGGGAGCACTAGC+AGG | 0.440136 | 3.1:-69385156 | None:intergenic |
CATTGTTCTCATTACATCTC+AGG | 0.442576 | 3.1:+69385188 | MS.gene045171:CDS |
GCCACGAGAGTGATATTTCC+CGG | 0.447718 | 3.1:+69383693 | MS.gene045171:CDS |
CGCTGTCTGTCTCATACTCA+GGG | 0.448994 | 3.1:-69380812 | None:intergenic |
GGAAATATCACTCTCGTGGC+GGG | 0.451213 | 3.1:-69383690 | None:intergenic |
TGTAGGGGAGCTATGAAATT+GGG | 0.453562 | 3.1:+69380438 | None:intergenic |
AGCTATGAAATTGGGTCGAC+TGG | 0.455057 | 3.1:+69380446 | None:intergenic |
CCAACTTTATTCATCAGGTA+AGG | 0.459982 | 3.1:-69381052 | None:intergenic |
GCATGGCTTGCAAGAAGGTT+GGG | 0.460900 | 3.1:+69386072 | MS.gene045171:CDS |
ACAGCTGTATATTGATTAGC+TGG | 0.468190 | 3.1:-69386124 | None:intergenic |
AAAACCCATACCGGATTCCT+TGG | 0.468656 | 3.1:-69382701 | None:intergenic |
GGGGCATAAGAGACAATGTT+AGG | 0.469707 | 3.1:+69383732 | MS.gene045171:CDS |
AAGGTTGGGCGTGGCTTGCA+AGG | 0.480309 | 3.1:+69386086 | MS.gene045171:CDS |
CCTTACCTGATGAATAAAGT+TGG | 0.481739 | 3.1:+69381052 | MS.gene045171:CDS |
TGACAAAGCGTTAGCAGTAT+CGG | 0.487789 | 3.1:+69380845 | MS.gene045171:CDS |
GAGGCATACCTCAGAAGTAT+TGG | 0.492547 | 3.1:+69385820 | MS.gene045171:CDS |
ATCTCAACACTGAATGATTG+AGG | 0.492927 | 3.1:-69384452 | None:intergenic |
TCGAGAAGACAATGGAAAGT+TGG | 0.493098 | 3.1:+69385846 | MS.gene045171:CDS |
TGAATGATTGAGGGCATTGA+CGG | 0.503300 | 3.1:-69384442 | None:intergenic |
GGAAGTAAAACAAGCTGCAT+TGG | 0.503573 | 3.1:+69382525 | MS.gene045171:CDS |
AATACTGACACCAAGGAATC+CGG | 0.505188 | 3.1:+69382691 | MS.gene045171:CDS |
GCAAAATATCCATTACATAT+GGG | 0.508499 | 3.1:-69385369 | None:intergenic |
TTCATCAAACTACTTCATCA+AGG | 0.511278 | 3.1:+69380583 | MS.gene045171:CDS |
TATGAAGGTGTACGGTGCAC+TGG | 0.512093 | 3.1:+69385906 | MS.gene045171:CDS |
AGCCAAAACAAAGGCAGCAA+TGG | 0.513768 | 3.1:+69382573 | MS.gene045171:CDS |
GTCTATCTTTCAATCAAAAG+AGG | 0.513894 | 3.1:+69385801 | MS.gene045171:intron |
GGTGCTTTGGGACGGTGTAA+AGG | 0.520108 | 3.1:-69385414 | None:intergenic |
TAGAAATAAGATCTCAGCGT+TGG | 0.520586 | 3.1:+69381284 | MS.gene045171:CDS |
TCAGATCACAAATAGAAGAA+AGG | 0.525142 | 3.1:+69382098 | MS.gene045171:CDS |
AGAGCATCGAAACTCCAATC+AGG | 0.527876 | 3.1:-69380495 | None:intergenic |
AGTGGGAAAGAAATTGAGAA+AGG | 0.533181 | 3.1:+69380768 | MS.gene045171:CDS |
AATCCGCATGGCTTGCAAGA+AGG | 0.533446 | 3.1:+69386067 | MS.gene045171:CDS |
CTTCAAATATAGAGCATGGT+AGG | 0.534137 | 3.1:+69383337 | MS.gene045171:CDS |
TTACACCGTCCCAAAGCACC+TGG | 0.537516 | 3.1:+69385417 | MS.gene045171:CDS |
GAATTTCTCAACTCGAAGAA+GGG | 0.543891 | 3.1:-69381346 | None:intergenic |
AAAGGCTAAAGCTGAAGCAG+AGG | 0.545258 | 3.1:+69382195 | MS.gene045171:CDS |
ATGACATTGGCAATTGCAAA+GGG | 0.545913 | 3.1:-69385168 | None:intergenic |
TTAGGGTTAACTTATTCAGT+GGG | 0.546979 | 3.1:+69380751 | MS.gene045171:intron |
AGCACTAGCAGGGCTTGCAC+AGG | 0.547376 | 3.1:-69385145 | None:intergenic |
TCTCAACACTGAATGATTGA+GGG | 0.548370 | 3.1:-69384451 | None:intergenic |
GTATGAAGAGGCCAAGAGAA+AGG | 0.551262 | 3.1:+69382141 | MS.gene045171:CDS |
GTGATAACGTATTTGACTGC+AGG | 0.554583 | 3.1:-69386428 | None:intergenic |
TTTAGGGTTAACTTATTCAG+TGG | 0.560055 | 3.1:+69380750 | MS.gene045171:intron |
GTTTGATGAAAATGCAAAGG+TGG | 0.561720 | 3.1:-69380570 | None:intergenic |
AGGTGGAGTGGAAGAATTAG+CGG | 0.565983 | 3.1:-69380553 | None:intergenic |
GCGGCTAGAATCATATATGA+AGG | 0.567325 | 3.1:+69385891 | MS.gene045171:CDS |
GCTTGCAAGAAGGTTGGGCG+TGG | 0.571452 | 3.1:+69386077 | MS.gene045171:CDS |
GAAATTCAAAGAAACAAGGC+AGG | 0.576260 | 3.1:+69381362 | MS.gene045171:CDS |
GTAAACCAGGTGCTTTGGGA+CGG | 0.576994 | 3.1:-69385422 | None:intergenic |
TCCTTCAAGTGCCAGAAGGA+AGG | 0.577361 | 3.1:+69386403 | MS.gene045171:CDS |
ATGAAAATGCAAAGGTGGAG+TGG | 0.582161 | 3.1:-69380565 | None:intergenic |
ACGACAGGTCCCATATGTAA+TGG | 0.582923 | 3.1:+69385360 | MS.gene045171:intron |
GAATCATATATGAAGGTGTA+CGG | 0.586014 | 3.1:+69385898 | MS.gene045171:CDS |
AATGACATTGGCAATTGCAA+AGG | 0.588611 | 3.1:-69385169 | None:intergenic |
AAGTGATGCAGCGTATGAAG+AGG | 0.595948 | 3.1:+69382129 | MS.gene045171:CDS |
ATTCTCCAAAGCATTGAGCT+CGG | 0.597981 | 3.1:-69380523 | None:intergenic |
TAGAACTTGATCTTACAACT+TGG | 0.600852 | 3.1:-69383392 | None:intergenic |
CTCGATAACCAATACTTCTG+AGG | 0.601452 | 3.1:-69385828 | None:intergenic |
TGTAATGAGAACAATGACAT+TGG | 0.604848 | 3.1:-69385181 | None:intergenic |
TTGCAAAGGGAGCACTAGCA+GGG | 0.607083 | 3.1:-69385155 | None:intergenic |
AGTATTTAATAGGCTTGATG+CGG | 0.608274 | 3.1:-69382674 | None:intergenic |
CCTGATGAATAAAGTTGGGG+AGG | 0.613663 | 3.1:+69381057 | MS.gene045171:CDS |
GTACAGAAGATTATTTAAAG+CGG | 0.615401 | 3.1:+69385872 | MS.gene045171:CDS |
CAGTTCCTTCAAGTGCCAGA+AGG | 0.616857 | 3.1:+69386399 | MS.gene045171:CDS |
CCGAACATTCAAAATCCGCA+TGG | 0.620982 | 3.1:+69386055 | MS.gene045171:CDS |
GAGAAAGGTTGCTTTGCAGG+AGG | 0.625015 | 3.1:+69382156 | MS.gene045171:CDS |
GAAGACTACTGCATACATGC+AGG | 0.626530 | 3.1:+69386359 | MS.gene045171:CDS |
ATTGGTTATCGAGAAGACAA+TGG | 0.628835 | 3.1:+69385838 | MS.gene045171:CDS |
AGTGCTTCAAATATAGAGCA+TGG | 0.630506 | 3.1:+69383333 | MS.gene045171:CDS |
TTACCTGATGAATAAAGTTG+GGG | 0.630676 | 3.1:+69381054 | MS.gene045171:CDS |
CTGTCTCATACTCAGGGGCA+CGG | 0.632727 | 3.1:-69380806 | None:intergenic |
GCGTTAGCAGTATCGGACAC+TGG | 0.634293 | 3.1:+69380852 | MS.gene045171:CDS |
CGGAATATAAAGCAAATAAG+GGG | 0.635811 | 3.1:+69383713 | MS.gene045171:CDS |
GCAGGCCAAACTTAAAGCCG+AGG | 0.640019 | 3.1:+69382504 | MS.gene045171:intron |
GGGAAATATCACTCTCGTGG+CGG | 0.640943 | 3.1:-69383691 | None:intergenic |
CCTATTAAATACTGACACCA+AGG | 0.642682 | 3.1:+69382684 | MS.gene045171:CDS |
TCCGGGAAATATCACTCTCG+TGG | 0.645571 | 3.1:-69383694 | None:intergenic |
CAACCTTCTTGCAAGCCATG+CGG | 0.652087 | 3.1:-69386070 | None:intergenic |
AACACACGATCATCAACTGA+GGG | 0.653093 | 3.1:+69381102 | MS.gene045171:CDS |
CTTGTGATGAAATTTATCTG+AGG | 0.654595 | 3.1:+69380886 | MS.gene045171:CDS |
GTAGTTTGATGAAAATGCAA+AGG | 0.657587 | 3.1:-69380573 | None:intergenic |
TGTAAGATCAAGTTCTACAC+AGG | 0.659828 | 3.1:+69383398 | MS.gene045171:CDS |
TTGAGAAATTCAAAGAAACA+AGG | 0.661129 | 3.1:+69381358 | MS.gene045171:CDS |
AGTAATGGAAGCCAAAACAA+AGG | 0.684556 | 3.1:+69382564 | MS.gene045171:CDS |
TTCCAAAGCAGAGTCAACAT+CGG | 0.691363 | 3.1:-69381023 | None:intergenic |
TAACACACGATCATCAACTG+AGG | 0.709226 | 3.1:+69381101 | MS.gene045171:CDS |
TGAGTATGAGACAGACAGCG+AGG | 0.732630 | 3.1:+69380815 | MS.gene045171:CDS |
GCTGTCTGTCTCATACTCAG+GGG | 0.738330 | 3.1:-69380811 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAAATAATGAATTGATA+AGG | - | chr3.1:69380625-69380644 | None:intergenic | 10.0% |
!! | GAAAAATTAGTATATTTATA+GGG | + | chr3.1:69384272-69384291 | MS.gene045171:intron | 10.0% |
!! | TGAAAAATTAGTATATTTAT+AGG | + | chr3.1:69384271-69384290 | MS.gene045171:intron | 10.0% |
!!! | AAAAAATTCTAATTTTTTTG+GGG | - | chr3.1:69384040-69384059 | None:intergenic | 10.0% |
!!! | AATATGAATTTTTATATGTT+TGG | + | chr3.1:69384076-69384095 | MS.gene045171:intron | 10.0% |
!!! | AATTTTTTTTCCAATTTTTT+TGG | + | chr3.1:69384145-69384164 | MS.gene045171:intron | 10.0% |
!!! | TAATATTTTGTAATTTTCTT+TGG | + | chr3.1:69380978-69380997 | MS.gene045171:intron | 10.0% |
!!! | TTTTTTTTTATTAGAAGAAT+GGG | - | chr3.1:69384711-69384730 | None:intergenic | 10.0% |
!!! | TTTTTTTTTTATTAGAAGAA+TGG | - | chr3.1:69384712-69384731 | None:intergenic | 10.0% |
!! | AAATAAATATTGATGAAACA+AGG | - | chr3.1:69382928-69382947 | None:intergenic | 15.0% |
!! | AACAATCAAACTAAAATAAA+AGG | - | chr3.1:69382229-69382248 | None:intergenic | 15.0% |
!! | ACAATCAAACTAAAATAAAA+GGG | - | chr3.1:69382228-69382247 | None:intergenic | 15.0% |
!! | TACATATGATATTACTTAAA+AGG | - | chr3.1:69383959-69383978 | None:intergenic | 15.0% |
!! | TGTTGAGATATTAATTAAAA+AGG | + | chr3.1:69384466-69384485 | MS.gene045171:CDS | 15.0% |
!! | TTGGTGTATTTATTAATATA+CGG | + | chr3.1:69386187-69386206 | MS.gene045171:intron | 15.0% |
!!! | AAAAAAAAAAGTGTATGAAA+CGG | - | chr3.1:69383044-69383063 | None:intergenic | 15.0% |
!!! | ATTTTAGTTTGATTGTTATT+TGG | + | chr3.1:69382232-69382251 | MS.gene045171:intron | 15.0% |
!!! | TTAATTGTAGATGTTATTTT+TGG | + | chr3.1:69384603-69384622 | MS.gene045171:intron | 15.0% |
!!! | TTCACGATATTTAAATTTTA+CGG | + | chr3.1:69382480-69382499 | MS.gene045171:intron | 15.0% |
!!! | TTTTGTTAGTATCTTATTTA+AGG | - | chr3.1:69384348-69384367 | None:intergenic | 15.0% |
!! | AAAAGTCGAAGAAAAAATTT+AGG | - | chr3.1:69383898-69383917 | None:intergenic | 20.0% |
!! | AAAATCTCTTCCAAAAAAAT+TGG | - | chr3.1:69384158-69384177 | None:intergenic | 20.0% |
!! | AAAGTCGAAGAAAAAATTTA+GGG | - | chr3.1:69383897-69383916 | None:intergenic | 20.0% |
!! | AAATTCACTTGTATGAATAT+TGG | + | chr3.1:69381835-69381854 | MS.gene045171:intron | 20.0% |
!! | AATATTCTACACATTTCATA+AGG | + | chr3.1:69384181-69384200 | MS.gene045171:intron | 20.0% |
!! | AATTCACTTGTATGAATATT+GGG | + | chr3.1:69381836-69381855 | MS.gene045171:intron | 20.0% |
!! | ACAATAACTAATCTTAAAAC+TGG | + | chr3.1:69384571-69384590 | MS.gene045171:intron | 20.0% |
!! | AGAAAGATATTATATGTCAA+TGG | - | chr3.1:69384514-69384533 | None:intergenic | 20.0% |
!! | ATAAATAAGTTGTAGAATGA+AGG | - | chr3.1:69381475-69381494 | None:intergenic | 20.0% |
!! | ATATATATACAGAGAAACAA+AGG | - | chr3.1:69382875-69382894 | None:intergenic | 20.0% |
!! | ATATGATATTACTTAAAAGG+AGG | - | chr3.1:69383956-69383975 | None:intergenic | 20.0% |
!! | ATATTATATGTCAATGGAAT+CGG | - | chr3.1:69384508-69384527 | None:intergenic | 20.0% |
!! | ATTTAAATATCGTGAATGAA+TGG | - | chr3.1:69382476-69382495 | None:intergenic | 20.0% |
!! | CAAAAGCAAATAAATAATCT+TGG | - | chr3.1:69385318-69385337 | None:intergenic | 20.0% |
!! | CAATAACTAATCTTAAAACT+GGG | + | chr3.1:69384572-69384591 | MS.gene045171:intron | 20.0% |
!! | CTGTATATATATTAGTATAC+TGG | + | chr3.1:69382883-69382902 | MS.gene045171:intron | 20.0% |
!! | GTTTAAATTTATGGAATGTT+TGG | + | chr3.1:69384849-69384868 | MS.gene045171:intron | 20.0% |
!! | TAATGCATATTTATTTCACA+AGG | + | chr3.1:69383562-69383581 | MS.gene045171:intron | 20.0% |
!! | TATGATATTACTTAAAAGGA+GGG | - | chr3.1:69383955-69383974 | None:intergenic | 20.0% |
!! | TCTTGAAAAGAAAAGATAAA+GGG | - | chr3.1:69381442-69381461 | None:intergenic | 20.0% |
!! | TTCCATAAATTTAAACCATT+AGG | - | chr3.1:69384845-69384864 | None:intergenic | 20.0% |
!! | TTTATTAGAGGTTCAAATAA+TGG | + | chr3.1:69381568-69381587 | MS.gene045171:intron | 20.0% |
!!! | AAGTTGAAGAAAAATTTTAG+AGG | + | chr3.1:69384240-69384259 | MS.gene045171:intron | 20.0% |
!!! | AGTTGAAGAAAAATTTTAGA+GGG | + | chr3.1:69384241-69384260 | MS.gene045171:intron | 20.0% |
!!! | ATGAATTTTTATATGTTTGG+TGG | + | chr3.1:69384079-69384098 | MS.gene045171:intron | 20.0% |
!!! | CAAGATTATTTATTTGCTTT+TGG | + | chr3.1:69385316-69385335 | MS.gene045171:intron | 20.0% |
!!! | CTACAATAATTTTGTTTGTA+TGG | + | chr3.1:69385573-69385592 | MS.gene045171:intron | 20.0% |
!!! | GAAAAGTTGGTATATTTATA+GGG | - | chr3.1:69383866-69383885 | None:intergenic | 20.0% |
!!! | TAATATCTTTCTGCTTTATT+TGG | + | chr3.1:69384522-69384541 | MS.gene045171:intron | 20.0% |
!!! | TATCATCGAAAAAAAGTTTT+AGG | - | chr3.1:69382359-69382378 | None:intergenic | 20.0% |
!!! | TGAACTTTGTTGATTTTTTA+GGG | + | chr3.1:69380734-69380753 | MS.gene045171:intron | 20.0% |
!!! | TGGTGATTGAAAATTTTATA+GGG | + | chr3.1:69384212-69384231 | MS.gene045171:intron | 20.0% |
!!! | TTGAACTTTGTTGATTTTTT+AGG | + | chr3.1:69380733-69380752 | MS.gene045171:intron | 20.0% |
!!! | TTGATAAAGGGAATTTTTTA+GGG | + | chr3.1:69383823-69383842 | MS.gene045171:intron | 20.0% |
!!! | TTTAGGGTTAAATATGTTTT+TGG | + | chr3.1:69383839-69383858 | MS.gene045171:intron | 20.0% |
!!! | TTTCCTTTTGAGATATATAT+GGG | + | chr3.1:69383072-69383091 | MS.gene045171:intron | 20.0% |
!!! | TTTGATAAAGGGAATTTTTT+AGG | + | chr3.1:69383822-69383841 | MS.gene045171:intron | 20.0% |
!!! | TTTTCCTTTTGAGATATATA+TGG | + | chr3.1:69383071-69383090 | MS.gene045171:intron | 20.0% |
! | AAGTGAAGATGAAAAACTTT+CGG | - | chr3.1:69383927-69383946 | None:intergenic | 25.0% |
! | AATGGTGAAAAATTGCTTAA+TGG | - | chr3.1:69381652-69381671 | None:intergenic | 25.0% |
! | AATTGGGTTACATATGTATT+TGG | - | chr3.1:69384299-69384318 | None:intergenic | 25.0% |
! | AGCAAAATATCCATTACATA+TGG | - | chr3.1:69385373-69385392 | None:intergenic | 25.0% |
! | AGTAAGAAATGCAAAATGTT+TGG | + | chr3.1:69386168-69386187 | MS.gene045171:intron | 25.0% |
! | CAAGTCAAATTGGTATAAAT+AGG | - | chr3.1:69381142-69381161 | None:intergenic | 25.0% |
! | CAATTCTCTTCACTAAATAT+TGG | + | chr3.1:69381705-69381724 | MS.gene045171:intron | 25.0% |
! | CACCTAATGGTTTAAATTTA+TGG | + | chr3.1:69384840-69384859 | MS.gene045171:intron | 25.0% |
! | CTTGAAAAGAAAAGATAAAG+GGG | - | chr3.1:69381441-69381460 | None:intergenic | 25.0% |
! | GCAAAATATCCATTACATAT+GGG | - | chr3.1:69385372-69385391 | None:intergenic | 25.0% |
! | GTACAGAAGATTATTTAAAG+CGG | + | chr3.1:69385872-69385891 | MS.gene045171:CDS | 25.0% |
! | GTCTTGAAAAGAAAAGATAA+AGG | - | chr3.1:69381443-69381462 | None:intergenic | 25.0% |
! | TAAGCTTCTATAAAGAAGAT+TGG | - | chr3.1:69382442-69382461 | None:intergenic | 25.0% |
! | TAAGGATTGAAATTTCCTAT+AGG | - | chr3.1:69384330-69384349 | None:intergenic | 25.0% |
! | TATACATGTACAGAAATGTT+TGG | + | chr3.1:69382263-69382282 | MS.gene045171:intron | 25.0% |
! | TCAAAATCAGAGAATTTGAT+GGG | - | chr3.1:69383628-69383647 | None:intergenic | 25.0% |
! | TCATATTCATAAACTTAACG+CGG | - | chr3.1:69380690-69380709 | None:intergenic | 25.0% |
! | TGATCTAAAAGTGAAAACAT+TGG | - | chr3.1:69382754-69382773 | None:intergenic | 25.0% |
! | TTCCCTTTATCAAAATGTAT+AGG | - | chr3.1:69383816-69383835 | None:intergenic | 25.0% |
! | TTGAGAAATTCAAAGAAACA+AGG | + | chr3.1:69381358-69381377 | MS.gene045171:CDS | 25.0% |
!! | AAATATGATTTGATAACCGT+GGG | + | chr3.1:69385734-69385753 | MS.gene045171:intron | 25.0% |
!! | AAATTTTCAATCACCACTTT+TGG | - | chr3.1:69384208-69384227 | None:intergenic | 25.0% |
!! | ATATTTAAATTTTACGGTGC+AGG | + | chr3.1:69382486-69382505 | MS.gene045171:intron | 25.0% |
!! | ATTGATAAGGTTTTTGAATG+TGG | - | chr3.1:69380612-69380631 | None:intergenic | 25.0% |
!! | GTGGTGATTGAAAATTTTAT+AGG | + | chr3.1:69384211-69384230 | MS.gene045171:intron | 25.0% |
!! | TTGATAAGGTTTTTGAATGT+GGG | - | chr3.1:69380611-69380630 | None:intergenic | 25.0% |
!!! | AAGATTTTGACAAATTCACA+CGG | + | chr3.1:69385949-69385968 | MS.gene045171:intron | 25.0% |
!!! | AATTACGAGTTTTAAGACAA+AGG | - | chr3.1:69383449-69383468 | None:intergenic | 25.0% |
!!! | AATTCTCTGATTTTGACATT+TGG | + | chr3.1:69383632-69383651 | MS.gene045171:intron | 25.0% |
!!! | ATATGTAATGGATATTTTGC+TGG | + | chr3.1:69385372-69385391 | MS.gene045171:CDS | 25.0% |
!!! | CGAAAAGTTGGTATATTTAT+AGG | - | chr3.1:69383867-69383886 | None:intergenic | 25.0% |
!!! | GACCTATACATTTTGATAAA+GGG | + | chr3.1:69383811-69383830 | MS.gene045171:intron | 25.0% |
!!! | TGACCTATACATTTTGATAA+AGG | + | chr3.1:69383810-69383829 | MS.gene045171:intron | 25.0% |
!!! | TGCAATGTTTTAAAAACTTG+TGG | + | chr3.1:69384950-69384969 | MS.gene045171:intron | 25.0% |
AAAATCAGAGAATTTGATGG+GGG | - | chr3.1:69383626-69383645 | None:intergenic | 30.0% | |
AACCTCTAATAAAGCACATT+GGG | - | chr3.1:69381561-69381580 | None:intergenic | 30.0% | |
AAGAAATTGAGAAAGGTAGA+AGG | + | chr3.1:69380775-69380794 | MS.gene045171:CDS | 30.0% | |
AAGCAAAACCAACAGATAAT+TGG | - | chr3.1:69383498-69383517 | None:intergenic | 30.0% | |
AAGCAATACCAATTATCTGT+TGG | + | chr3.1:69383487-69383506 | MS.gene045171:intron | 30.0% | |
ACAAAGGATTTCCAACTAAA+TGG | - | chr3.1:69382859-69382878 | None:intergenic | 30.0% | |
AGTATTTAATAGGCTTGATG+CGG | - | chr3.1:69382677-69382696 | None:intergenic | 30.0% | |
AGTGAAGATGAAAAACTTTC+GGG | - | chr3.1:69383926-69383945 | None:intergenic | 30.0% | |
ATAACTTCAGTTCCTTAGAA+TGG | + | chr3.1:69384667-69384686 | MS.gene045171:intron | 30.0% | |
ATATTGATGAAACAAGGAAG+AGG | - | chr3.1:69382922-69382941 | None:intergenic | 30.0% | |
ATCAGTTAACTGTATATGGA+AGG | + | chr3.1:69384626-69384645 | MS.gene045171:intron | 30.0% | |
ATCTGTTTATACTTCATAGG+AGG | + | chr3.1:69381746-69381765 | MS.gene045171:intron | 30.0% | |
ATTAGGTGAAGATACATGAA+TGG | - | chr3.1:69384828-69384847 | None:intergenic | 30.0% | |
ATTCATGTATCTTCACCTAA+TGG | + | chr3.1:69384827-69384846 | MS.gene045171:intron | 30.0% | |
CAAAATCAGAGAATTTGATG+GGG | - | chr3.1:69383627-69383646 | None:intergenic | 30.0% | |
CATTAACAAGATCCATATAG+TGG | - | chr3.1:69382394-69382413 | None:intergenic | 30.0% | |
CCGGAATATAAAGCAAATAA+GGG | + | chr3.1:69383712-69383731 | MS.gene045171:CDS | 30.0% | |
CCTATAGGACATCAAAAATT+GGG | - | chr3.1:69384315-69384334 | None:intergenic | 30.0% | |
CGGAATATAAAGCAAATAAG+GGG | + | chr3.1:69383713-69383732 | MS.gene045171:CDS | 30.0% | |
CTATGGTTGTTAATAAATGC+AGG | + | chr3.1:69385078-69385097 | MS.gene045171:intron | 30.0% | |
CTGATCTGTTTATACTTCAT+AGG | + | chr3.1:69381743-69381762 | MS.gene045171:intron | 30.0% | |
CTTACCTGATGAATAAAGTT+GGG | + | chr3.1:69381053-69381072 | MS.gene045171:CDS | 30.0% | |
CTTGTGATGAAATTTATCTG+AGG | + | chr3.1:69380886-69380905 | MS.gene045171:CDS | 30.0% | |
GAAATACGAGAATAAAGCTA+TGG | - | chr3.1:69380927-69380946 | None:intergenic | 30.0% | |
GATCCCATATATATCTCAAA+AGG | - | chr3.1:69383078-69383097 | None:intergenic | 30.0% | |
GGAAAAAAACAGAGCATAAA+AGG | + | chr3.1:69384547-69384566 | MS.gene045171:intron | 30.0% | |
GTAGTTTGATGAAAATGCAA+AGG | - | chr3.1:69380576-69380595 | None:intergenic | 30.0% | |
GTCAAAATCAGAGAATTTGA+TGG | - | chr3.1:69383629-69383648 | None:intergenic | 30.0% | |
GTCAAATATTAGTTATCAGC+AGG | - | chr3.1:69381896-69381915 | None:intergenic | 30.0% | |
GTCTATCTTTCAATCAAAAG+AGG | + | chr3.1:69385801-69385820 | MS.gene045171:intron | 30.0% | |
TAAAGGGAAAAAACTGACAT+TGG | - | chr3.1:69382784-69382803 | None:intergenic | 30.0% | |
TAAATGGTAGTAAGAGAATC+AGG | - | chr3.1:69382843-69382862 | None:intergenic | 30.0% | |
TACCGTTGAAAACAGATATT+GGG | + | chr3.1:69383421-69383440 | MS.gene045171:intron | 30.0% | |
TAGAACTTGATCTTACAACT+TGG | - | chr3.1:69383395-69383414 | None:intergenic | 30.0% | |
TCAGATCACAAATAGAAGAA+AGG | + | chr3.1:69382098-69382117 | MS.gene045171:CDS | 30.0% | |
TCCTATAGGACATCAAAAAT+TGG | - | chr3.1:69384316-69384335 | None:intergenic | 30.0% | |
TCTAAGGAACTGAAGTTATT+AGG | - | chr3.1:69384666-69384685 | None:intergenic | 30.0% | |
TGAAAAAAGAAAACCCATAC+CGG | - | chr3.1:69382713-69382732 | None:intergenic | 30.0% | |
TGTAATGAGAACAATGACAT+TGG | - | chr3.1:69385184-69385203 | None:intergenic | 30.0% | |
TTACCTGATGAATAAAGTTG+GGG | + | chr3.1:69381054-69381073 | MS.gene045171:CDS | 30.0% | |
TTAGGGTTAACTTATTCAGT+GGG | + | chr3.1:69380751-69380770 | MS.gene045171:intron | 30.0% | |
TTCATCAAACTACTTCATCA+AGG | + | chr3.1:69380583-69380602 | MS.gene045171:CDS | 30.0% | |
TTCTCTTACTACCATTTAGT+TGG | + | chr3.1:69382845-69382864 | MS.gene045171:intron | 30.0% | |
TTGAATAGCTTAGTCATTCT+TGG | + | chr3.1:69381173-69381192 | MS.gene045171:intron | 30.0% | |
TTGGATCAGTTAACTGTATA+TGG | + | chr3.1:69384622-69384641 | MS.gene045171:intron | 30.0% | |
! | AAACAAGAGAAACAGTGTTT+TGG | - | chr3.1:69381959-69381978 | None:intergenic | 30.0% |
! | AAATGTATGGGTTGCAATTT+AGG | - | chr3.1:69382294-69382313 | None:intergenic | 30.0% |
! | AACAAGAGAAACAGTGTTTT+GGG | - | chr3.1:69381958-69381977 | None:intergenic | 30.0% |
! | AACATCTGAAACCAATTTCA+TGG | - | chr3.1:69385021-69385040 | None:intergenic | 30.0% |
! | AAGTTACCTTTTTGTAAACC+AGG | - | chr3.1:69385438-69385457 | None:intergenic | 30.0% |
! | AAGTTGAATCAAAAGTGTAG+GGG | + | chr3.1:69383132-69383151 | MS.gene045171:intron | 30.0% |
! | AATATGATTTGATAACCGTG+GGG | + | chr3.1:69385735-69385754 | MS.gene045171:intron | 30.0% |
! | CAAATATGATTTGATAACCG+TGG | + | chr3.1:69385733-69385752 | MS.gene045171:intron | 30.0% |
! | CCCTTATTTGCTTTATATTC+CGG | - | chr3.1:69383715-69383734 | None:intergenic | 30.0% |
! | CCTTATTTGCTTTATATTCC+GGG | - | chr3.1:69383714-69383733 | None:intergenic | 30.0% |
! | GAAGTTGAATCAAAAGTGTA+GGG | + | chr3.1:69383131-69383150 | MS.gene045171:intron | 30.0% |
! | GAATCATATATGAAGGTGTA+CGG | + | chr3.1:69385898-69385917 | MS.gene045171:CDS | 30.0% |
! | GCACATTTTGCCTAAATAAA+AGG | + | chr3.1:69385595-69385614 | MS.gene045171:intron | 30.0% |
! | GCATGACTATTTACTCTTTT+GGG | + | chr3.1:69384373-69384392 | MS.gene045171:intron | 30.0% |
! | GGGAATGTAGACAATTTTAT+AGG | - | chr3.1:69381541-69381560 | None:intergenic | 30.0% |
! | TACCCAATATCTGTTTTCAA+CGG | - | chr3.1:69383426-69383445 | None:intergenic | 30.0% |
! | TATTTCACAAGGAATTTGCT+TGG | + | chr3.1:69383573-69383592 | MS.gene045171:intron | 30.0% |
! | TCTTTTGACCCAGATAAAAT+GGG | - | chr3.1:69385627-69385646 | None:intergenic | 30.0% |
! | TGAAGTTGAATCAAAAGTGT+AGG | + | chr3.1:69383130-69383149 | MS.gene045171:intron | 30.0% |
! | TGCATGACTATTTACTCTTT+TGG | + | chr3.1:69384372-69384391 | MS.gene045171:intron | 30.0% |
! | TTCTTTTGACCCAGATAAAA+TGG | - | chr3.1:69385628-69385647 | None:intergenic | 30.0% |
! | TTTAGGGTTAACTTATTCAG+TGG | + | chr3.1:69380750-69380769 | MS.gene045171:intron | 30.0% |
!! | AAGCATTGACTATGAATTAC+AGG | + | chr3.1:69381513-69381532 | MS.gene045171:intron | 30.0% |
!! | ATCTTTCTGCTTTATTTGGA+AGG | + | chr3.1:69384526-69384545 | MS.gene045171:intron | 30.0% |
!! | CGGTTATTTTCAAAAACAGT+TGG | - | chr3.1:69380670-69380689 | None:intergenic | 30.0% |
AAAAAAACTGCTCCTTAGCT+AGG | - | chr3.1:69385509-69385528 | None:intergenic | 35.0% | |
AAAAGAAAAGATAAAGGGGC+AGG | - | chr3.1:69381437-69381456 | None:intergenic | 35.0% | |
AAAGCTATGGTTCACGAAAT+AGG | - | chr3.1:69380914-69380933 | None:intergenic | 35.0% | |
AACTGCTCTACACAATCTTT+AGG | + | chr3.1:69383288-69383307 | MS.gene045171:intron | 35.0% | |
AATGACATTGGCAATTGCAA+AGG | - | chr3.1:69385172-69385191 | None:intergenic | 35.0% | |
AGCTGAGAAAAAAGCAGTAA+TGG | + | chr3.1:69382549-69382568 | MS.gene045171:CDS | 35.0% | |
AGGATCCAAAAACCATTCTA+AGG | - | chr3.1:69384682-69384701 | None:intergenic | 35.0% | |
AGTGCTTCAAATATAGAGCA+TGG | + | chr3.1:69383333-69383352 | MS.gene045171:CDS | 35.0% | |
AGTGGGAAAGAAATTGAGAA+AGG | + | chr3.1:69380768-69380787 | MS.gene045171:CDS | 35.0% | |
ATACTTCATAGGAGGAAGAT+TGG | + | chr3.1:69381754-69381773 | MS.gene045171:intron | 35.0% | |
ATAGCTTAGTCATTCTTGGT+TGG | + | chr3.1:69381177-69381196 | MS.gene045171:intron | 35.0% | |
ATCGTGAATGAATGGTCATT+TGG | - | chr3.1:69382468-69382487 | None:intergenic | 35.0% | |
ATCTCAACACTGAATGATTG+AGG | - | chr3.1:69384455-69384474 | None:intergenic | 35.0% | |
ATGACATTGGCAATTGCAAA+GGG | - | chr3.1:69385171-69385190 | None:intergenic | 35.0% | |
ATTAGAAGAATGGGTCGTTA+AGG | - | chr3.1:69384702-69384721 | None:intergenic | 35.0% | |
ATTGGTTATCGAGAAGACAA+TGG | + | chr3.1:69385838-69385857 | MS.gene045171:CDS | 35.0% | |
CAAGTGACAACATACTTTAC+AGG | + | chr3.1:69385113-69385132 | MS.gene045171:intron | 35.0% | |
CAATGCAGCAGTAAATGTAT+GGG | - | chr3.1:69382306-69382325 | None:intergenic | 35.0% | |
CATTGTTCTCATTACATCTC+AGG | + | chr3.1:69385188-69385207 | MS.gene045171:CDS | 35.0% | |
CATTTCATAAGGACCAAAAG+TGG | + | chr3.1:69384192-69384211 | MS.gene045171:intron | 35.0% | |
CCAACTTTATTCATCAGGTA+AGG | - | chr3.1:69381055-69381074 | None:intergenic | 35.0% | |
CCCGGAATATAAAGCAAATA+AGG | + | chr3.1:69383711-69383730 | MS.gene045171:CDS | 35.0% | |
CCTATTAAATACTGACACCA+AGG | + | chr3.1:69382684-69382703 | MS.gene045171:CDS | 35.0% | |
CCTTACCTGATGAATAAAGT+TGG | + | chr3.1:69381052-69381071 | MS.gene045171:CDS | 35.0% | |
CTATTTGTGATCTGAGTTCA+CGG | - | chr3.1:69382093-69382112 | None:intergenic | 35.0% | |
CTTCAAATATAGAGCATGGT+AGG | + | chr3.1:69383337-69383356 | MS.gene045171:CDS | 35.0% | |
CTTCACTAAATATTGGCGAA+AGG | + | chr3.1:69381712-69381731 | MS.gene045171:intron | 35.0% | |
CTTCTGCACTACAAAAAGTT+GGG | - | chr3.1:69382036-69382055 | None:intergenic | 35.0% | |
GAAATTCAAAGAAACAAGGC+AGG | + | chr3.1:69381362-69381381 | MS.gene045171:CDS | 35.0% | |
GAACAAAAGCTAGCAAGAAA+TGG | + | chr3.1:69385049-69385068 | MS.gene045171:intron | 35.0% | |
GAACCTCTAATAAAGCACAT+TGG | - | chr3.1:69381562-69381581 | None:intergenic | 35.0% | |
GAATTTCTCAACTCGAAGAA+GGG | - | chr3.1:69381349-69381368 | None:intergenic | 35.0% | |
GACTTTACTAGAACTTGTGA+GGG | + | chr3.1:69385238-69385257 | MS.gene045171:intron | 35.0% | |
GCAAGAAATGGTAGAATCTA+TGG | + | chr3.1:69385061-69385080 | MS.gene045171:intron | 35.0% | |
GGAAAAACAACAGCAAGAAA+AGG | + | chr3.1:69382177-69382196 | MS.gene045171:CDS | 35.0% | |
GTACCGTTGAAAACAGATAT+TGG | + | chr3.1:69383420-69383439 | MS.gene045171:intron | 35.0% | |
GTGAAGATGAAAAACTTTCG+GGG | - | chr3.1:69383925-69383944 | None:intergenic | 35.0% | |
GTGACTGAAATCCATGAAAT+TGG | + | chr3.1:69385007-69385026 | MS.gene045171:intron | 35.0% | |
GTGGAGACTGAAGAAAATAT+AGG | - | chr3.1:69383002-69383021 | None:intergenic | 35.0% | |
GTTTGATGAAAATGCAAAGG+TGG | - | chr3.1:69380573-69380592 | None:intergenic | 35.0% | |
GTTTGGTCTATTCACTTTAC+CGG | + | chr3.1:69382326-69382345 | MS.gene045171:intron | 35.0% | |
TAACAAGATCCATATAGTGG+TGG | - | chr3.1:69382391-69382410 | None:intergenic | 35.0% | |
TAGAAATAAGATCTCAGCGT+TGG | + | chr3.1:69381284-69381303 | MS.gene045171:CDS | 35.0% | |
TAGGGACTAAAACGAAAAGT+TGG | - | chr3.1:69383879-69383898 | None:intergenic | 35.0% | |
TATTTGCAGAACATGTAAGC+AGG | - | chr3.1:69385719-69385738 | None:intergenic | 35.0% | |
TCGTGAATGAATGGTCATTT+GGG | - | chr3.1:69382467-69382486 | None:intergenic | 35.0% | |
TCTCAACACTGAATGATTGA+GGG | - | chr3.1:69384454-69384473 | None:intergenic | 35.0% | |
TGAAGATGAAAAACTTTCGG+GGG | - | chr3.1:69383924-69383943 | None:intergenic | 35.0% | |
TGAATTTCTCAACTCGAAGA+AGG | - | chr3.1:69381350-69381369 | None:intergenic | 35.0% | |
TGTAAGATCAAGTTCTACAC+AGG | + | chr3.1:69383398-69383417 | MS.gene045171:CDS | 35.0% | |
TTATGCGTCAACATATGTTC+AGG | + | chr3.1:69383661-69383680 | MS.gene045171:intron | 35.0% | |
TTGTCACTGACAAGTCAAAT+TGG | - | chr3.1:69381152-69381171 | None:intergenic | 35.0% | |
TTTACATGTCCACCACTATA+TGG | + | chr3.1:69382379-69382398 | MS.gene045171:intron | 35.0% | |
TTTCACCATTTGTTTGAGTG+AGG | + | chr3.1:69381662-69381681 | MS.gene045171:intron | 35.0% | |
! | AAAGCACCTGGTTTACAAAA+AGG | + | chr3.1:69385429-69385448 | MS.gene045171:CDS | 35.0% |
! | AACTTTTGTGCTTAACAACG+TGG | - | chr3.1:69383021-69383040 | None:intergenic | 35.0% |
! | ACAGCTGTATATTGATTAGC+TGG | - | chr3.1:69386127-69386146 | None:intergenic | 35.0% |
! | AGTAATGGAAGCCAAAACAA+AGG | + | chr3.1:69382564-69382583 | MS.gene045171:CDS | 35.0% |
! | ATGCACAGTAATTTCAAGTC+GGG | + | chr3.1:69381793-69381812 | MS.gene045171:intron | 35.0% |
! | ATTGCTTAATGGATCTCTAC+AGG | - | chr3.1:69381641-69381660 | None:intergenic | 35.0% |
! | ATTTTCGCGAGCAATAACTT+CGG | + | chr3.1:69382957-69382976 | MS.gene045171:intron | 35.0% |
! | CAGTTCCTTAGAATGGTTTT+TGG | + | chr3.1:69384674-69384693 | MS.gene045171:intron | 35.0% |
! | CCCAATTTTTGATGTCCTAT+AGG | + | chr3.1:69384312-69384331 | MS.gene045171:intron | 35.0% |
! | GATGCACAGTAATTTCAAGT+CGG | + | chr3.1:69381792-69381811 | MS.gene045171:intron | 35.0% |
! | TTCCCAATGTGCTTTATTAG+AGG | + | chr3.1:69381556-69381575 | MS.gene045171:intron | 35.0% |
! | TTCTGATCTTTTCGATTCAC+AGG | + | chr3.1:69381254-69381273 | MS.gene045171:intron | 35.0% |
! | TTTTGTAAACCAGGTGCTTT+GGG | - | chr3.1:69385429-69385448 | None:intergenic | 35.0% |
! | TTTTTGTAAACCAGGTGCTT+TGG | - | chr3.1:69385430-69385449 | None:intergenic | 35.0% |
!! | CCTTGGTGTCAGTATTTAAT+AGG | - | chr3.1:69382687-69382706 | None:intergenic | 35.0% |
!! | GATACTGATACTGTTGATTC+TGG | + | chr3.1:69385757-69385776 | MS.gene045171:intron | 35.0% |
!! | GGAAGTTACTCTTTAAAGTG+AGG | - | chr3.1:69383605-69383624 | None:intergenic | 35.0% |
!! | TGGGCTCAAACCTTTTATTT+AGG | - | chr3.1:69385608-69385627 | None:intergenic | 35.0% |
!! | TGTTTTGGGTGATATAAGAG+CGG | - | chr3.1:69381944-69381963 | None:intergenic | 35.0% |
!!! | GGAGCAGTTTTTTTTTGTTG+AGG | + | chr3.1:69385515-69385534 | MS.gene045171:intron | 35.0% |
!!! | TGCTAGCTTTTGTTCATCAT+TGG | - | chr3.1:69385044-69385063 | None:intergenic | 35.0% |
AACACACGATCATCAACTGA+GGG | + | chr3.1:69381102-69381121 | MS.gene045171:CDS | 40.0% | |
AATAAAGTTGGGGAGGTAGA+AGG | + | chr3.1:69381064-69381083 | MS.gene045171:CDS | 40.0% | |
AATACTGACACCAAGGAATC+CGG | + | chr3.1:69382691-69382710 | MS.gene045171:CDS | 40.0% | |
ACTATGCATTTCCACTTCCA+AGG | + | chr3.1:69384755-69384774 | MS.gene045171:intron | 40.0% | |
ATGAAAATGCAAAGGTGGAG+TGG | - | chr3.1:69380568-69380587 | None:intergenic | 40.0% | |
CAAAGAAACAAGGCAGGAAT+TGG | + | chr3.1:69381368-69381387 | MS.gene045171:CDS | 40.0% | |
CATATTGGATGAGGAGAAAC+GGG | - | chr3.1:69382807-69382826 | None:intergenic | 40.0% | |
CATCAAGCGAAGAGTTCTTT+GGG | - | chr3.1:69384781-69384800 | None:intergenic | 40.0% | |
CCAATGCAGCAGTAAATGTA+TGG | - | chr3.1:69382307-69382326 | None:intergenic | 40.0% | |
CCATACATTTACTGCTGCAT+TGG | + | chr3.1:69382304-69382323 | MS.gene045171:intron | 40.0% | |
CGACTTTACTAGAACTTGTG+AGG | + | chr3.1:69385237-69385256 | MS.gene045171:intron | 40.0% | |
CTCGATAACCAATACTTCTG+AGG | - | chr3.1:69385831-69385850 | None:intergenic | 40.0% | |
GAGAGGCTAGACAATAAACA+TGG | - | chr3.1:69385218-69385237 | None:intergenic | 40.0% | |
GATTGAAAGATAGACTGTCG+CGG | - | chr3.1:69385796-69385815 | None:intergenic | 40.0% | |
GCATATTGGATGAGGAGAAA+CGG | - | chr3.1:69382808-69382827 | None:intergenic | 40.0% | |
GCGGCTAGAATCATATATGA+AGG | + | chr3.1:69385891-69385910 | MS.gene045171:CDS | 40.0% | |
GCTTCTGCACTACAAAAAGT+TGG | - | chr3.1:69382037-69382056 | None:intergenic | 40.0% | |
GGAAGTAAAACAAGCTGCAT+TGG | + | chr3.1:69382525-69382544 | MS.gene045171:CDS | 40.0% | |
TAACACACGATCATCAACTG+AGG | + | chr3.1:69381101-69381120 | MS.gene045171:CDS | 40.0% | |
TCGAGAAGACAATGGAAAGT+TGG | + | chr3.1:69385846-69385865 | MS.gene045171:CDS | 40.0% | |
TTCCAAAGCAGAGTCAACAT+CGG | - | chr3.1:69381026-69381045 | None:intergenic | 40.0% | |
TTTACTAGAACTTGTGAGGG+TGG | + | chr3.1:69385241-69385260 | MS.gene045171:intron | 40.0% | |
! | AGGTTTGAGCCCATTTTATC+TGG | + | chr3.1:69385615-69385634 | MS.gene045171:intron | 40.0% |
! | CAAGTTCTAGTAAAGTCGAG+AGG | - | chr3.1:69385235-69385254 | None:intergenic | 40.0% |
! | CCATGCGGATTTTGAATGTT+CGG | - | chr3.1:69386058-69386077 | None:intergenic | 40.0% |
! | CTTTTGTAGCTTCCTAGCTA+AGG | + | chr3.1:69385494-69385513 | MS.gene045171:intron | 40.0% |
! | GATCTTTTCGATTCACAGGA+TGG | + | chr3.1:69381258-69381277 | MS.gene045171:intron | 40.0% |
! | GGTTTGAGCCCATTTTATCT+GGG | + | chr3.1:69385616-69385635 | MS.gene045171:intron | 40.0% |
! | GTGATAACGTATTTGACTGC+AGG | - | chr3.1:69386431-69386450 | None:intergenic | 40.0% |
! | TAATGGATCTCTACAGGTAG+TGG | - | chr3.1:69381635-69381654 | None:intergenic | 40.0% |
! | TGACAAAGCGTTAGCAGTAT+CGG | + | chr3.1:69380845-69380864 | MS.gene045171:CDS | 40.0% |
! | TGCACAGTAATTTCAAGTCG+GGG | + | chr3.1:69381794-69381813 | MS.gene045171:intron | 40.0% |
!! | ATTCTCCAAAGCATTGAGCT+CGG | - | chr3.1:69380526-69380545 | None:intergenic | 40.0% |
!! | CATTTACTGCTGCATTGGTT+TGG | + | chr3.1:69382309-69382328 | MS.gene045171:intron | 40.0% |
!! | GAGAATCAGGCAAAGCATTT+TGG | - | chr3.1:69382830-69382849 | None:intergenic | 40.0% |
!! | GCATTTTGGCATATTGGATG+AGG | - | chr3.1:69382816-69382835 | None:intergenic | 40.0% |
!! | GGCAAAGCATTTTGGCATAT+TGG | - | chr3.1:69382822-69382841 | None:intergenic | 40.0% |
!! | GTTTTGGGTGATATAAGAGC+GGG | - | chr3.1:69381943-69381962 | None:intergenic | 40.0% |
!! | TACTTCCTCGGCTTTAAGTT+TGG | - | chr3.1:69382512-69382531 | None:intergenic | 40.0% |
!! | TGAATGATTGAGGGCATTGA+CGG | - | chr3.1:69384445-69384464 | None:intergenic | 40.0% |
!! | TTCCATTGCTGCCTTTGTTT+TGG | - | chr3.1:69382578-69382597 | None:intergenic | 40.0% |
!!! | AAAAGTTTTAGGCTAGTCGC+CGG | - | chr3.1:69382348-69382367 | None:intergenic | 40.0% |
!!! | TGCAGCTTGTTTTACTTCCT+CGG | - | chr3.1:69382524-69382543 | None:intergenic | 40.0% |
AAAACCCATACCGGATTCCT+TGG | - | chr3.1:69382704-69382723 | None:intergenic | 45.0% | |
AAAGGCTAAAGCTGAAGCAG+AGG | + | chr3.1:69382195-69382214 | MS.gene045171:CDS | 45.0% | |
AAGTGATGCAGCGTATGAAG+AGG | + | chr3.1:69382129-69382148 | MS.gene045171:CDS | 45.0% | |
AATTCTACTTTGCCCGCAGA+TGG | + | chr3.1:69386227-69386246 | MS.gene045171:intron | 45.0% | |
ACCATTTGTTTGAGTGAGGC+AGG | + | chr3.1:69381666-69381685 | MS.gene045171:intron | 45.0% | |
ACGACAGGTCCCATATGTAA+TGG | + | chr3.1:69385360-69385379 | MS.gene045171:intron | 45.0% | |
AGCCAAAACAAAGGCAGCAA+TGG | + | chr3.1:69382573-69382592 | MS.gene045171:CDS | 45.0% | |
AGGTGGAGTGGAAGAATTAG+CGG | - | chr3.1:69380556-69380575 | None:intergenic | 45.0% | |
CAACAGTATCAGTATCCCCA+CGG | - | chr3.1:69385753-69385772 | None:intergenic | 45.0% | |
CAACATGGTTGTGCTTCAAC+TGG | + | chr3.1:69385649-69385668 | MS.gene045171:intron | 45.0% | |
CATTTGTTTGAGTGAGGCAG+GGG | + | chr3.1:69381668-69381687 | MS.gene045171:intron | 45.0% | |
CCAAAGAACTCTTCGCTTGA+TGG | + | chr3.1:69384779-69384798 | MS.gene045171:intron | 45.0% | |
CCATCAAGCGAAGAGTTCTT+TGG | - | chr3.1:69384782-69384801 | None:intergenic | 45.0% | |
CCATTTGTTTGAGTGAGGCA+GGG | + | chr3.1:69381667-69381686 | MS.gene045171:intron | 45.0% | |
CCGAACATTCAAAATCCGCA+TGG | + | chr3.1:69386055-69386074 | MS.gene045171:CDS | 45.0% | |
CCTCCCCAACTTTATTCATC+AGG | - | chr3.1:69381060-69381079 | None:intergenic | 45.0% | |
CCTGATGAATAAAGTTGGGG+AGG | + | chr3.1:69381057-69381076 | MS.gene045171:CDS | 45.0% | |
CTGCAAAGCAACCTTTCTCT+TGG | - | chr3.1:69382155-69382174 | None:intergenic | 45.0% | |
CTGGGTCAAAAGAAGCAACA+TGG | + | chr3.1:69385634-69385653 | MS.gene045171:intron | 45.0% | |
GAAGACTACTGCATACATGC+AGG | + | chr3.1:69386359-69386378 | MS.gene045171:CDS | 45.0% | |
GATGAGGAGAAACGGGTAAA+GGG | - | chr3.1:69382800-69382819 | None:intergenic | 45.0% | |
GGGGCATAAGAGACAATGTT+AGG | + | chr3.1:69383732-69383751 | MS.gene045171:CDS | 45.0% | |
GTATGAAGAGGCCAAGAGAA+AGG | + | chr3.1:69382141-69382160 | MS.gene045171:CDS | 45.0% | |
TATAGATCAAGACACCGAGC+AGG | - | chr3.1:69383225-69383244 | None:intergenic | 45.0% | |
TTGTTTACCATCTGCACGAC+AGG | + | chr3.1:69385345-69385364 | MS.gene045171:intron | 45.0% | |
TTTCCCTGCTTCAAACTCAC+TGG | - | chr3.1:69385543-69385562 | None:intergenic | 45.0% | |
! | CAAGAGAAAGGTTGCTTTGC+AGG | + | chr3.1:69382153-69382172 | MS.gene045171:CDS | 45.0% |
! | GAACCAGTGAGTTTGAAGCA+GGG | + | chr3.1:69385537-69385556 | MS.gene045171:intron | 45.0% |
! | GAGGCATACCTCAGAAGTAT+TGG | + | chr3.1:69385820-69385839 | MS.gene045171:CDS | 45.0% |
! | TTGCTGCTTCTGATCCTGAT+TGG | + | chr3.1:69380481-69380500 | MS.gene045171:CDS | 45.0% |
!! | AGAGCATCGAAACTCCAATC+AGG | - | chr3.1:69380498-69380517 | None:intergenic | 45.0% |
!! | TTCCGATGTTGACTCTGCTT+TGG | + | chr3.1:69381021-69381040 | MS.gene045171:CDS | 45.0% |
!!! | TAAAAAATTCTAATTTTTTT+GGG | - | chr3.1:69384041-69384060 | None:intergenic | 5.0% |
!!! | TTAAAAAATTCTAATTTTTT+TGG | - | chr3.1:69384042-69384061 | None:intergenic | 5.0% |
AATCAGTGGGAGGAGTGGAA+TGG | - | chr3.1:69383202-69383221 | None:intergenic | 50.0% | |
AGAGCAAATCCAGCCATCTG+CGG | - | chr3.1:69386243-69386262 | None:intergenic | 50.0% | |
AGTTCTTTGGGCCTTGGAAG+TGG | - | chr3.1:69384769-69384788 | None:intergenic | 50.0% | |
CAACCTTCTTGCAAGCCATG+CGG | - | chr3.1:69386073-69386092 | None:intergenic | 50.0% | |
CAGTTCCTTCAAGTGCCAGA+AGG | + | chr3.1:69386399-69386418 | MS.gene045171:CDS | 50.0% | |
CCCTGCCTCACTCAAACAAA+TGG | - | chr3.1:69381670-69381689 | None:intergenic | 50.0% | |
CGCTGTCTGTCTCATACTCA+GGG | - | chr3.1:69380815-69380834 | None:intergenic | 50.0% | |
GACACCAAGGAATCCGGTAT+GGG | + | chr3.1:69382697-69382716 | MS.gene045171:intron | 50.0% | |
GCAGTAGTCTTCGCTGAATC+TGG | - | chr3.1:69386351-69386370 | None:intergenic | 50.0% | |
GCATAGTCAGCTGCTCAATC+AGG | - | chr3.1:69386014-69386033 | None:intergenic | 50.0% | |
GCCACGAGAGTGATATTTCC+CGG | + | chr3.1:69383693-69383712 | MS.gene045171:CDS | 50.0% | |
GCTGTCTGTCTCATACTCAG+GGG | - | chr3.1:69380814-69380833 | None:intergenic | 50.0% | |
GGAAATATCACTCTCGTGGC+GGG | - | chr3.1:69383693-69383712 | None:intergenic | 50.0% | |
GGATGAGGAGAAACGGGTAA+AGG | - | chr3.1:69382801-69382820 | None:intergenic | 50.0% | |
GGGAAATATCACTCTCGTGG+CGG | - | chr3.1:69383694-69383713 | None:intergenic | 50.0% | |
TCCGGGAAATATCACTCTCG+TGG | - | chr3.1:69383697-69383716 | None:intergenic | 50.0% | |
TCCTTCAAGTGCCAGAAGGA+AGG | + | chr3.1:69386403-69386422 | MS.gene045171:CDS | 50.0% | |
TCCTTCCTTCTGGCACTTGA+AGG | - | chr3.1:69386407-69386426 | None:intergenic | 50.0% | |
TCGCTGTCTGTCTCATACTC+AGG | - | chr3.1:69380816-69380835 | None:intergenic | 50.0% | |
TGACACCAAGGAATCCGGTA+TGG | + | chr3.1:69382696-69382715 | MS.gene045171:intron | 50.0% | |
TGAGTATGAGACAGACAGCG+AGG | + | chr3.1:69380815-69380834 | MS.gene045171:CDS | 50.0% | |
TGTGAGGGTGGTAGTCTTCA+AGG | + | chr3.1:69385253-69385272 | MS.gene045171:intron | 50.0% | |
! | AATCCGCATGGCTTGCAAGA+AGG | + | chr3.1:69386067-69386086 | MS.gene045171:CDS | 50.0% |
! | GAGAAAGGTTGCTTTGCAGG+AGG | + | chr3.1:69382156-69382175 | MS.gene045171:CDS | 50.0% |
! | GCATGGCTTGCAAGAAGGTT+GGG | + | chr3.1:69386072-69386091 | MS.gene045171:CDS | 50.0% |
! | GGAACCAGTGAGTTTGAAGC+AGG | + | chr3.1:69385536-69385555 | MS.gene045171:intron | 50.0% |
! | TATGAAGGTGTACGGTGCAC+TGG | + | chr3.1:69385906-69385925 | MS.gene045171:CDS | 50.0% |
!! | ATTGCAAAGGGAGCACTAGC+AGG | - | chr3.1:69385159-69385178 | None:intergenic | 50.0% |
!! | GTAAACCAGGTGCTTTGGGA+CGG | - | chr3.1:69385425-69385444 | None:intergenic | 50.0% |
!! | TTGCAAAGGGAGCACTAGCA+GGG | - | chr3.1:69385158-69385177 | None:intergenic | 50.0% |
AGACACCGAGCAGGAATCAG+TGG | - | chr3.1:69383216-69383235 | None:intergenic | 55.0% | |
CGTCTCCGAGCTCAATGCTT+TGG | + | chr3.1:69380518-69380537 | MS.gene045171:CDS | 55.0% | |
CTGTCTCATACTCAGGGGCA+CGG | - | chr3.1:69380809-69380828 | None:intergenic | 55.0% | |
GACACCGAGCAGGAATCAGT+GGG | - | chr3.1:69383215-69383234 | None:intergenic | 55.0% | |
GACTGCAGGTTCCTTCCTTC+TGG | - | chr3.1:69386417-69386436 | None:intergenic | 55.0% | |
GAGCAAATCCAGCCATCTGC+GGG | - | chr3.1:69386242-69386261 | None:intergenic | 55.0% | |
GCAGGCCAAACTTAAAGCCG+AGG | + | chr3.1:69382504-69382523 | MS.gene045171:intron | 55.0% | |
GCGAAGAGTTCTTTGGGCCT+TGG | - | chr3.1:69384775-69384794 | None:intergenic | 55.0% | |
GGGGCAGGACGTCTTACATT+TGG | - | chr3.1:69381422-69381441 | None:intergenic | 55.0% | |
TATGGGACCTGTCGTGCAGA+TGG | - | chr3.1:69385355-69385374 | None:intergenic | 55.0% | |
! | CGCATGGCTTGCAAGAAGGT+TGG | + | chr3.1:69386071-69386090 | MS.gene045171:CDS | 55.0% |
! | GCGTTAGCAGTATCGGACAC+TGG | + | chr3.1:69380852-69380871 | MS.gene045171:CDS | 55.0% |
! | TTACACCGTCCCAAAGCACC+TGG | + | chr3.1:69385417-69385436 | MS.gene045171:CDS | 55.0% |
!! | GGTGCTTTGGGACGGTGTAA+AGG | - | chr3.1:69385417-69385436 | None:intergenic | 55.0% |
!! | TCCTCCCACTGATTCCTGCT+CGG | + | chr3.1:69383208-69383227 | MS.gene045171:intron | 55.0% |
ACCGAGCAGGAATCAGTGGG+AGG | - | chr3.1:69383212-69383231 | None:intergenic | 60.0% | |
AGCACTAGCAGGGCTTGCAC+AGG | - | chr3.1:69385148-69385167 | None:intergenic | 60.0% | |
CTACTTTGCCCGCAGATGGC+TGG | + | chr3.1:69386231-69386250 | MS.gene045171:intron | 60.0% | |
GCAGGAATCAGTGGGAGGAG+TGG | - | chr3.1:69383207-69383226 | None:intergenic | 60.0% | |
GCTTGCAAGAAGGTTGGGCG+TGG | + | chr3.1:69386077-69386096 | MS.gene045171:CDS | 60.0% | |
! | AAGGTTGGGCGTGGCTTGCA+AGG | + | chr3.1:69386086-69386105 | MS.gene045171:CDS | 60.0% |
!! | GGTGTACGGTGCACTGGTTC+AGG | + | chr3.1:69385912-69385931 | MS.gene045171:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 69380450 | 69386467 | 69380450 | ID=MS.gene045171 |
chr3.1 | mRNA | 69380450 | 69386467 | 69380450 | ID=MS.gene045171.t1;Parent=MS.gene045171 |
chr3.1 | exon | 69380450 | 69380604 | 69380450 | ID=MS.gene045171.t1.exon1;Parent=MS.gene045171.t1 |
chr3.1 | CDS | 69380450 | 69380604 | 69380450 | ID=cds.MS.gene045171.t1;Parent=MS.gene045171.t1 |
chr3.1 | exon | 69380755 | 69380907 | 69380755 | ID=MS.gene045171.t1.exon2;Parent=MS.gene045171.t1 |
chr3.1 | CDS | 69380755 | 69380907 | 69380755 | ID=cds.MS.gene045171.t1;Parent=MS.gene045171.t1 |
chr3.1 | exon | 69381009 | 69381129 | 69381009 | ID=MS.gene045171.t1.exon3;Parent=MS.gene045171.t1 |
chr3.1 | CDS | 69381009 | 69381129 | 69381009 | ID=cds.MS.gene045171.t1;Parent=MS.gene045171.t1 |
chr3.1 | exon | 69381276 | 69381424 | 69381276 | ID=MS.gene045171.t1.exon4;Parent=MS.gene045171.t1 |
chr3.1 | CDS | 69381276 | 69381424 | 69381276 | ID=cds.MS.gene045171.t1;Parent=MS.gene045171.t1 |
chr3.1 | exon | 69382048 | 69382216 | 69382048 | ID=MS.gene045171.t1.exon5;Parent=MS.gene045171.t1 |
chr3.1 | CDS | 69382048 | 69382216 | 69382048 | ID=cds.MS.gene045171.t1;Parent=MS.gene045171.t1 |
chr3.1 | exon | 69382508 | 69382712 | 69382508 | ID=MS.gene045171.t1.exon6;Parent=MS.gene045171.t1 |
chr3.1 | CDS | 69382508 | 69382712 | 69382508 | ID=cds.MS.gene045171.t1;Parent=MS.gene045171.t1 |
chr3.1 | exon | 69383310 | 69383419 | 69383310 | ID=MS.gene045171.t1.exon7;Parent=MS.gene045171.t1 |
chr3.1 | CDS | 69383310 | 69383419 | 69383310 | ID=cds.MS.gene045171.t1;Parent=MS.gene045171.t1 |
chr3.1 | exon | 69383683 | 69383753 | 69383683 | ID=MS.gene045171.t1.exon8;Parent=MS.gene045171.t1 |
chr3.1 | CDS | 69383683 | 69383753 | 69383683 | ID=cds.MS.gene045171.t1;Parent=MS.gene045171.t1 |
chr3.1 | exon | 69384406 | 69384487 | 69384406 | ID=MS.gene045171.t1.exon9;Parent=MS.gene045171.t1 |
chr3.1 | CDS | 69384406 | 69384487 | 69384406 | ID=cds.MS.gene045171.t1;Parent=MS.gene045171.t1 |
chr3.1 | exon | 69385135 | 69385209 | 69385135 | ID=MS.gene045171.t1.exon10;Parent=MS.gene045171.t1 |
chr3.1 | CDS | 69385135 | 69385209 | 69385135 | ID=cds.MS.gene045171.t1;Parent=MS.gene045171.t1 |
chr3.1 | exon | 69385367 | 69385450 | 69385367 | ID=MS.gene045171.t1.exon11;Parent=MS.gene045171.t1 |
chr3.1 | CDS | 69385367 | 69385450 | 69385367 | ID=cds.MS.gene045171.t1;Parent=MS.gene045171.t1 |
chr3.1 | exon | 69385802 | 69385933 | 69385802 | ID=MS.gene045171.t1.exon12;Parent=MS.gene045171.t1 |
chr3.1 | CDS | 69385802 | 69385933 | 69385802 | ID=cds.MS.gene045171.t1;Parent=MS.gene045171.t1 |
chr3.1 | exon | 69386046 | 69386168 | 69386046 | ID=MS.gene045171.t1.exon13;Parent=MS.gene045171.t1 |
chr3.1 | CDS | 69386046 | 69386168 | 69386046 | ID=cds.MS.gene045171.t1;Parent=MS.gene045171.t1 |
chr3.1 | exon | 69386246 | 69386467 | 69386246 | ID=MS.gene045171.t1.exon14;Parent=MS.gene045171.t1 |
chr3.1 | CDS | 69386246 | 69386467 | 69386246 | ID=cds.MS.gene045171.t1;Parent=MS.gene045171.t1 |
Gene Sequence |
Protein sequence |