Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045203.t1 | XP_024635362.1 | 92.8 | 1823 | 131 | 1 | 1 | 1823 | 1 | 1822 | 0.00E+00 | 2523.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045203.t1 | G7J2J8 | 92.8 | 1823 | 131 | 1 | 1 | 1823 | 1 | 1822 | 0.0e+00 | 2523.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene88567 | MS.gene045203 | PPI |
| MS.gene95928 | MS.gene045203 | PPI |
| MS.gene29268 | MS.gene045203 | PPI |
| MS.gene026214 | MS.gene045203 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045203.t1 | MTR_3g086150 | 94.679 | 1823 | 96 | 1 | 1 | 1823 | 1 | 1822 | 0.0 | 3407 |
| MS.gene045203.t1 | MTR_3g086150 | 94.693 | 1790 | 94 | 1 | 1 | 1790 | 1 | 1789 | 0.0 | 3336 |
| MS.gene045203.t1 | MTR_1g009610 | 27.991 | 468 | 272 | 17 | 1390 | 1818 | 2390 | 2831 | 8.02e-23 | 107 |
| MS.gene045203.t1 | MTR_1g009610 | 34.524 | 168 | 89 | 4 | 268 | 416 | 1329 | 1494 | 2.43e-12 | 73.2 |
| MS.gene045203.t1 | MTR_5g069400 | 68.750 | 48 | 14 | 1 | 371 | 417 | 12 | 59 | 6.08e-13 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045203.t1 | AT1G24460 | 38.910 | 1064 | 583 | 9 | 807 | 1810 | 738 | 1794 | 0.0 | 642 |
| MS.gene045203.t1 | AT1G24460 | 32.239 | 1157 | 545 | 34 | 51 | 1059 | 39 | 1104 | 2.25e-102 | 365 |
| MS.gene045203.t1 | AT1G24460 | 39.058 | 1019 | 569 | 7 | 807 | 1810 | 738 | 1719 | 0.0 | 624 |
| MS.gene045203.t1 | AT1G24460 | 32.298 | 1127 | 531 | 33 | 51 | 1029 | 39 | 1081 | 2.19e-102 | 365 |
| MS.gene045203.t1 | AT4G31570 | 24.390 | 779 | 479 | 28 | 1087 | 1823 | 1772 | 2482 | 1.08e-24 | 114 |
| MS.gene045203.t1 | AT4G31570 | 24.390 | 779 | 479 | 28 | 1087 | 1823 | 1976 | 2686 | 1.78e-24 | 113 |
| MS.gene045203.t1 | AT4G31570 | 24.647 | 779 | 477 | 28 | 1087 | 1823 | 2013 | 2723 | 1.84e-24 | 113 |
| MS.gene045203.t1 | AT4G31570 | 24.519 | 779 | 478 | 28 | 1087 | 1823 | 2008 | 2718 | 2.00e-24 | 113 |
| MS.gene045203.t1 | AT4G31570 | 31.273 | 275 | 144 | 10 | 168 | 420 | 1228 | 1479 | 8.70e-14 | 78.2 |
| MS.gene045203.t1 | AT4G31570 | 23.828 | 789 | 478 | 32 | 1087 | 1823 | 2008 | 2725 | 7.06e-13 | 75.1 |
| MS.gene045203.t1 | AT4G31570 | 31.273 | 275 | 144 | 10 | 168 | 420 | 1233 | 1484 | 1.04e-13 | 77.8 |
| MS.gene045203.t1 | AT4G31570 | 23.701 | 789 | 479 | 32 | 1087 | 1823 | 2013 | 2730 | 7.75e-13 | 75.1 |
| MS.gene045203.t1 | AT4G31570 | 31.273 | 275 | 144 | 10 | 168 | 420 | 1233 | 1484 | 1.04e-13 | 77.8 |
| MS.gene045203.t1 | AT4G31570 | 23.701 | 789 | 479 | 32 | 1087 | 1823 | 2013 | 2730 | 7.75e-13 | 75.1 |
Find 315 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCTTTCCTGGACAATTTC+TGG | 0.043614 | 3.3:-71878333 | None:intergenic |
| TTCAACTTCTAGATCCTTTA+TGG | 0.113061 | 3.3:-71876017 | None:intergenic |
| ATTTGCTAATCATGCATTTA+TGG | 0.133581 | 3.3:+71879783 | MS.gene045203:CDS |
| CGTGGGAGCTTACAGTTTCT+TGG | 0.179361 | 3.3:-71875694 | None:intergenic |
| TCACTTATCGGAGCAGATTT+TGG | 0.199242 | 3.3:+71872693 | MS.gene045203:CDS |
| GATACTAATGAGCAGGAATT+TGG | 0.210844 | 3.3:+71873562 | MS.gene045203:CDS |
| TTTGTTGTAGTGAAGTATTC+AGG | 0.214106 | 3.3:-71873987 | None:intergenic |
| TCAGGCAAATCAAGCATTTC+AGG | 0.215642 | 3.3:-71874066 | None:intergenic |
| CATCAACAACAGAGTCATTT+TGG | 0.215669 | 3.3:+71873038 | MS.gene045203:CDS |
| AGCCAAGTTGCCCAAGATTT+TGG | 0.226321 | 3.3:-71877241 | None:intergenic |
| CTTTCCAAATGATGAAATTA+TGG | 0.232707 | 3.3:-71876934 | None:intergenic |
| CTACATGTATCTTAGCTTCT+TGG | 0.238921 | 3.3:-71875610 | None:intergenic |
| AACTAAGGCCCTTGAAATTA+AGG | 0.249907 | 3.3:+71877981 | MS.gene045203:CDS |
| AAAGCTAGAGGCTGATCTTT+TGG | 0.252539 | 3.3:+71875424 | MS.gene045203:CDS |
| TTCAAGTCTCTGAACACTTC+TGG | 0.255648 | 3.3:+71879059 | MS.gene045203:CDS |
| CAATAGATTGTCCATTGATT+TGG | 0.264069 | 3.3:+71874977 | MS.gene045203:CDS |
| CAAGAACCGTCAGATTTCTT+TGG | 0.267609 | 3.3:+71874416 | MS.gene045203:CDS |
| TCCCTGTCCGCTAAGGATTC+TGG | 0.271222 | 3.3:+71876493 | MS.gene045203:CDS |
| AACTGTTGTTTCGTTCAATT+TGG | 0.283807 | 3.3:-71877444 | None:intergenic |
| CAATAGATTGTCCAGTGATT+TGG | 0.290068 | 3.3:+71875391 | MS.gene045203:CDS |
| TTCAAAGTCTTCTGTATGTT+AGG | 0.307186 | 3.3:+71874619 | MS.gene045203:CDS |
| TAAACTGCAGGGTGCCTTCC+TGG | 0.307323 | 3.3:+71874119 | MS.gene045203:CDS |
| CCTTAGCGGACAGGGAAATA+TGG | 0.308278 | 3.3:-71876486 | None:intergenic |
| CTTTCTGATATTTATCAACT+TGG | 0.311795 | 3.3:+71873514 | MS.gene045203:CDS |
| CAATGAGATCCACATTCTTC+AGG | 0.313889 | 3.3:-71876447 | None:intergenic |
| ACAGATTTGAGGTTCGAATA+TGG | 0.314785 | 3.3:+71874381 | MS.gene045203:CDS |
| TGGTGCTCGTGGTGGGTTGC+TGG | 0.321090 | 3.3:+71873597 | MS.gene045203:CDS |
| TGATCTAAAAGATGAAGTTT+TGG | 0.322323 | 3.3:+71872878 | MS.gene045203:CDS |
| AGAAAGTTGATAAATGCTTC+TGG | 0.322654 | 3.3:+71877347 | MS.gene045203:CDS |
| TGCAAATAAAATTGCCAAAC+AGG | 0.323444 | 3.3:+71876246 | MS.gene045203:CDS |
| TGGATTCCTTAACGATCTTC+AGG | 0.326775 | 3.3:+71876360 | MS.gene045203:CDS |
| CTTCATATATGCTCCTTTCC+TGG | 0.327010 | 3.3:-71878344 | None:intergenic |
| GAAATGCTTAATTGAATTGC+AGG | 0.329134 | 3.3:+71873891 | MS.gene045203:CDS |
| TGAACCCTTTCAAACAATTC+GGG | 0.337019 | 3.3:-71874600 | None:intergenic |
| CTGGACAACAGAGAGATTAA+TGG | 0.339545 | 3.3:+71876897 | MS.gene045203:CDS |
| TTGAACCCTTTCAAACAATT+CGG | 0.341200 | 3.3:-71874601 | None:intergenic |
| CTATCTTCAGATTCTACAAT+AGG | 0.342695 | 3.3:-71877835 | None:intergenic |
| ATCTGAAAATTCAAAATCTA+AGG | 0.345380 | 3.3:+71878206 | MS.gene045203:CDS |
| GACACCATAATTTCATCATT+TGG | 0.345577 | 3.3:+71876930 | MS.gene045203:CDS |
| AGCCATACTAAGTTTCTCTT+TGG | 0.347518 | 3.3:-71873791 | None:intergenic |
| CCATTGATTTGGAAAGAGAT+AGG | 0.347992 | 3.3:+71874988 | MS.gene045203:CDS |
| CAGTATACTTGAAGCTAAAT+TGG | 0.349266 | 3.3:+71875664 | MS.gene045203:CDS |
| CAAGATAGGGACAATCTAAA+AGG | 0.353839 | 3.3:+71874864 | MS.gene045203:CDS |
| CCTTCACTTTGCGTAATTCC+AGG | 0.354937 | 3.3:-71874137 | None:intergenic |
| GACCATCTTGCTCTTGATAT+TGG | 0.357783 | 3.3:+71878903 | MS.gene045203:CDS |
| AGAAGGCGAAAATCAGAAAT+TGG | 0.359711 | 3.3:+71873666 | MS.gene045203:CDS |
| CAATTTAGCTTCAAGTATAC+TGG | 0.360809 | 3.3:-71875663 | None:intergenic |
| CTACTTGTTCATCTGCTTTG+TGG | 0.364234 | 3.3:-71877289 | None:intergenic |
| TTGAAGATTCGATTCAAGAT+AGG | 0.364500 | 3.3:+71878301 | MS.gene045203:CDS |
| CTCATTGCAGATCGTATTGA+TGG | 0.368014 | 3.3:+71879104 | MS.gene045203:CDS |
| TAGAGAATTATTGCCGCAAT+TGG | 0.369179 | 3.3:+71878155 | MS.gene045203:CDS |
| TGTAGAATCTGAAGATAGTA+TGG | 0.370165 | 3.3:+71877840 | MS.gene045203:CDS |
| GAAAGGGATTGGTTCAAGAT+AGG | 0.373460 | 3.3:+71874850 | MS.gene045203:CDS |
| CTCAGAGATTGAGCAGTTGC+AGG | 0.374018 | 3.3:+71874905 | MS.gene045203:CDS |
| GGGCCTCGGATGAAGCTTGC+AGG | 0.376584 | 3.3:-71873330 | None:intergenic |
| AAAAGATCAGCCTCTAGCTT+TGG | 0.376616 | 3.3:-71875422 | None:intergenic |
| CACCAAAATCTTGGGCAACT+TGG | 0.376667 | 3.3:+71877239 | MS.gene045203:CDS |
| GTCTGAGAATAATCACTTAT+CGG | 0.378869 | 3.3:+71872681 | MS.gene045203:CDS |
| GTTGGCCCAGAGTGAAAATA+TGG | 0.385392 | 3.3:+71873957 | MS.gene045203:CDS |
| CTAATGATTCGGAAAGAGAT+AGG | 0.387186 | 3.3:+71875264 | MS.gene045203:CDS |
| CCTTTAGATCCTTAATTTCA+AGG | 0.387785 | 3.3:-71877990 | None:intergenic |
| AATCATGCATTTATGGCTAC+TGG | 0.389563 | 3.3:+71879790 | MS.gene045203:CDS |
| GATTCGGATTCTCAATCAAA+TGG | 0.390543 | 3.3:+71872715 | MS.gene045203:CDS |
| TACCAAAGAGAAACTTAGTA+TGG | 0.390919 | 3.3:+71873789 | MS.gene045203:CDS |
| AAGGAAGTTCACCAAAATCT+TGG | 0.391707 | 3.3:+71877230 | MS.gene045203:CDS |
| TCAAGTTGTCAAGACTGAAT+TGG | 0.392813 | 3.3:+71876093 | MS.gene045203:CDS |
| GAACTTGGTATTAAATTAGT+TGG | 0.393993 | 3.3:+71878234 | MS.gene045203:CDS |
| AAATGCATGCACTGAGCTTA+AGG | 0.394839 | 3.3:+71877547 | MS.gene045203:CDS |
| TAGATCAGATGTGAATAAAC+TGG | 0.396938 | 3.3:+71874692 | MS.gene045203:CDS |
| TCAGTTTGAACAGTTCTTGA+TGG | 0.400931 | 3.3:+71875466 | MS.gene045203:CDS |
| TTTAGCTTCTCAACCTCAAA+AGG | 0.401079 | 3.3:-71877266 | None:intergenic |
| TCTTCTCCTCTGATCGTTCA+AGG | 0.402713 | 3.3:-71874785 | None:intergenic |
| GTGGGAGCTTACAGTTTCTT+GGG | 0.403953 | 3.3:-71875693 | None:intergenic |
| CTTGCAAGTGTTGTTAATCA+AGG | 0.404165 | 3.3:+71873406 | MS.gene045203:CDS |
| AGGAGAAGACTGGCATGCTT+AGG | 0.405576 | 3.3:+71874799 | MS.gene045203:CDS |
| AAGTGTTGTGAATGAATATC+AGG | 0.406781 | 3.3:+71873136 | MS.gene045203:CDS |
| TCTTCTGTATGTTAGGGATC+AGG | 0.407214 | 3.3:+71874626 | MS.gene045203:CDS |
| AGTCTGAATTAACAGATTTG+AGG | 0.408292 | 3.3:+71874370 | MS.gene045203:CDS |
| CCAGTGATTCGGAAAGAGAT+AGG | 0.408718 | 3.3:+71875126 | MS.gene045203:CDS |
| GGAAACAGAGTCTAATATAA+TGG | 0.412356 | 3.3:+71877061 | MS.gene045203:CDS |
| CTAATTTAATACCAAGTTCA+TGG | 0.413695 | 3.3:-71878230 | None:intergenic |
| GAATTTGGAAACATACTTGT+TGG | 0.415503 | 3.3:+71873577 | MS.gene045203:CDS |
| ATAAGTATCAATGTTTGATT+CGG | 0.415505 | 3.3:-71872746 | None:intergenic |
| TCCATGGAGAGGAGAAATAA+AGG | 0.417324 | 3.3:-71877030 | None:intergenic |
| GCAATGAGCTTTCCTTGCTT+CGG | 0.419441 | 3.3:-71879089 | None:intergenic |
| GAGCGAAGATATCTCCTGTT+TGG | 0.420870 | 3.3:-71876260 | None:intergenic |
| TCCTCTCCATGGAAAACTAC+TGG | 0.424534 | 3.3:+71877040 | MS.gene045203:CDS |
| ATATCTTTGACAAGATAGAT+AGG | 0.424874 | 3.3:+71877803 | MS.gene045203:CDS |
| AAACCTCTACGAGGATATAC+TGG | 0.426327 | 3.3:+71874653 | MS.gene045203:CDS |
| TCGAACGTGATTAGCTCGTC+GGG | 0.426509 | 3.3:-71872951 | None:intergenic |
| TCTATCTACAACCCAGTTGT+TGG | 0.426806 | 3.3:-71878118 | None:intergenic |
| TATCTTCAGATTCTACAATA+GGG | 0.427093 | 3.3:-71877834 | None:intergenic |
| TAGATCCTTTATGGTACTGC+TGG | 0.427788 | 3.3:-71876008 | None:intergenic |
| CATTGATACTTATCAAAATC+AGG | 0.429082 | 3.3:+71872756 | MS.gene045203:CDS |
| ATCTAGAATCACAAATGAAC+TGG | 0.433136 | 3.3:+71874205 | MS.gene045203:CDS |
| TTCTCAACTTGCTGAAGAAA+AGG | 0.433933 | 3.3:+71875748 | MS.gene045203:CDS |
| GAAAAGGTGAAATGGCTTGC+TGG | 0.434698 | 3.3:+71875572 | MS.gene045203:CDS |
| CATTTCAGGCTGATCAAGTT+CGG | 0.436337 | 3.3:-71874052 | None:intergenic |
| CTCAGAGATTGAGCAGTTGA+AGG | 0.437318 | 3.3:+71875043 | MS.gene045203:CDS |
| CTCAGAGATTGAGCAGTTGA+AGG | 0.437318 | 3.3:+71875319 | MS.gene045203:CDS |
| TTGTTGTAGTGAAGTATTCA+GGG | 0.439329 | 3.3:-71873986 | None:intergenic |
| TCTAGATCAGATGATGAAAC+AGG | 0.439352 | 3.3:-71874189 | None:intergenic |
| TTCGAATATGGAGAACTTGT+TGG | 0.441249 | 3.3:+71874393 | MS.gene045203:CDS |
| GAATTGAATAATGGCGTAGC+GGG | 0.442047 | 3.3:+71873062 | MS.gene045203:CDS |
| GTCATTCTCTGAGGTTGGCT+TGG | 0.443846 | 3.3:+71873540 | MS.gene045203:CDS |
| CAATAGATTGTCCAGTGATT+CGG | 0.444503 | 3.3:+71875115 | MS.gene045203:CDS |
| AAATCTAAGGCCCATGAACT+TGG | 0.444688 | 3.3:+71878219 | MS.gene045203:CDS |
| TGGAATGCTTTCCAAATCAC+TGG | 0.445821 | 3.3:-71875402 | None:intergenic |
| GGACAGTCATTCTCTGAGGT+TGG | 0.446660 | 3.3:+71873535 | MS.gene045203:CDS |
| TAGAGCATAAATATCATTGC+GGG | 0.448297 | 3.3:-71874250 | None:intergenic |
| CAATGATATTTATGCTCTAC+AGG | 0.448544 | 3.3:+71874254 | MS.gene045203:CDS |
| CAATAGATTGTCTAATGATT+CGG | 0.449960 | 3.3:+71875253 | MS.gene045203:CDS |
| AATGAGTCCTAATCTTGCTC+TGG | 0.450217 | 3.3:-71879756 | None:intergenic |
| ATCAATGCACAGTGCTTCGT+TGG | 0.452014 | 3.3:+71877631 | MS.gene045203:CDS |
| CCTATCTCTTTCCAAATCAA+TGG | 0.454507 | 3.3:-71874988 | None:intergenic |
| TTCAATGGCTTGTGGATGAC+AGG | 0.454605 | 3.3:+71874094 | MS.gene045203:CDS |
| GAAGGAATCTCTATCTCTAC+TGG | 0.455402 | 3.3:+71874155 | MS.gene045203:CDS |
| GGAACAGTTGCGGGTGAAGT+TGG | 0.455421 | 3.3:+71873091 | MS.gene045203:CDS |
| ACTATCTCAGGTTGAGAGTA+AGG | 0.456319 | 3.3:+71876039 | MS.gene045203:CDS |
| GAAAAGCTGTCTCATGTAGA+AGG | 0.456481 | 3.3:+71873649 | MS.gene045203:CDS |
| AGAGGCCAGCAGTACCATAA+AGG | 0.457352 | 3.3:+71876003 | MS.gene045203:CDS |
| TTATGCAGGGTATCCGGTAG+TGG | 0.458265 | 3.3:+71879716 | MS.gene045203:intron |
| CAGATCGTATTGATGGAATC+TGG | 0.458759 | 3.3:+71879111 | MS.gene045203:CDS |
| ATTCGGATTCTCAATCAAAT+GGG | 0.463090 | 3.3:+71872716 | MS.gene045203:CDS |
| AACCTATGGAAAAGGTGAAA+TGG | 0.463734 | 3.3:+71875564 | MS.gene045203:CDS |
| GACAAAGTTGAACGAAGAAA+AGG | 0.464880 | 3.3:+71877130 | MS.gene045203:CDS |
| ACATTATTGATAGTGTTACT+AGG | 0.466598 | 3.3:+71877899 | MS.gene045203:CDS |
| GCAAAGATTATCTTCTTCAG+AGG | 0.468388 | 3.3:+71875718 | MS.gene045203:CDS |
| GCTGATACCGATGATGATAA+AGG | 0.468466 | 3.3:+71878954 | MS.gene045203:CDS |
| CTCCAGAATCCTTAGCGGAC+AGG | 0.469222 | 3.3:-71876495 | None:intergenic |
| TTTCAAGGGCCTTAGTTTCG+AGG | 0.471347 | 3.3:-71877975 | None:intergenic |
| TCTAGAAGTTGAACTATCTC+AGG | 0.471449 | 3.3:+71876027 | MS.gene045203:CDS |
| TTATGTACACAGGGATCTCT+TGG | 0.471832 | 3.3:+71878816 | MS.gene045203:intron |
| CTCTGAAACTATCAAATCAC+TGG | 0.472440 | 3.3:+71876177 | MS.gene045203:CDS |
| GCCTTTATTTCTCCTCTCCA+TGG | 0.472775 | 3.3:+71877029 | MS.gene045203:CDS |
| TCAAAGTCTTCTGTATGTTA+GGG | 0.472817 | 3.3:+71874620 | MS.gene045203:CDS |
| ACTGATATCGTTCTCTAAAG+TGG | 0.476120 | 3.3:-71877165 | None:intergenic |
| ATCCGAGGCCCAACATGAAA+AGG | 0.477333 | 3.3:+71873342 | MS.gene045203:CDS |
| CACGTTCGACGGTAAGCAAA+AGG | 0.478122 | 3.3:+71872965 | MS.gene045203:CDS |
| CTCTTCAACTTCAGTTATCT+CGG | 0.478217 | 3.3:-71878388 | None:intergenic |
| GCAATCAATCCTCGAAACTA+AGG | 0.479936 | 3.3:+71877966 | MS.gene045203:CDS |
| CAAATGATCAATACAGTTGA+CGG | 0.479954 | 3.3:-71874304 | None:intergenic |
| AGGAAGTTCACCAAAATCTT+GGG | 0.480286 | 3.3:+71877231 | MS.gene045203:CDS |
| CTTTCCTTTCTTAACTGCCA+TGG | 0.480413 | 3.3:-71874832 | None:intergenic |
| CTTAGTATGGCTGTGACAAA+AGG | 0.481414 | 3.3:+71873802 | MS.gene045203:CDS |
| ATTTGCCTGAGAGACTTCAA+TGG | 0.482161 | 3.3:+71874079 | MS.gene045203:CDS |
| AACAAATCTCTAGAGCTCAT+TGG | 0.483447 | 3.3:+71876340 | MS.gene045203:CDS |
| ATTTCTTTATGCAGGGTATC+CGG | 0.484379 | 3.3:+71879710 | MS.gene045203:intron |
| CTCAGAGATCGATCAGTTGA+AGG | 0.486181 | 3.3:+71875181 | MS.gene045203:CDS |
| GGAGAAGACTGGCATGCTTA+GGG | 0.487639 | 3.3:+71874800 | MS.gene045203:CDS |
| AGAGCAAGATTAGGACTCAT+TGG | 0.489514 | 3.3:+71879758 | MS.gene045203:CDS |
| TGAAGCTTGCAGGATCTCAT+TGG | 0.489946 | 3.3:-71873320 | None:intergenic |
| TAAGCATTTCTCAAGCTCAC+TGG | 0.491182 | 3.3:-71873878 | None:intergenic |
| CGAGGAGAAAGAGCAGGCTC+AGG | 0.493694 | 3.3:+71875907 | MS.gene045203:CDS |
| AATCGTCCCAGAGCAAGATT+AGG | 0.494079 | 3.3:+71879749 | MS.gene045203:CDS |
| AATGAGATCCACATTCTTCA+GGG | 0.494140 | 3.3:-71876446 | None:intergenic |
| TGACCCCGAATTGTTTGAAA+GGG | 0.496330 | 3.3:+71874596 | MS.gene045203:CDS |
| ATGTAAAAGAGCTTCTTCAC+AGG | 0.497730 | 3.3:-71877880 | None:intergenic |
| GGAAGAAATTTCTACAATCA+AGG | 0.498493 | 3.3:+71874275 | MS.gene045203:CDS |
| TGTTAATCAAGGGCAAGTAT+TGG | 0.498633 | 3.3:+71873417 | MS.gene045203:CDS |
| ATGCACTGAGCTTAAGGATA+AGG | 0.499833 | 3.3:+71877553 | MS.gene045203:CDS |
| GCAACAGTTGCAGTTGGTAA+AGG | 0.501581 | 3.3:+71875634 | MS.gene045203:CDS |
| ATATTGACAATGTGATAGAT+AGG | 0.501939 | 3.3:+71873371 | MS.gene045203:CDS |
| CTTCTGTATGTTAGGGATCA+GGG | 0.502171 | 3.3:+71874627 | MS.gene045203:CDS |
| CCTATCTCTTTCCGAATCAC+TGG | 0.502804 | 3.3:-71875126 | None:intergenic |
| ACGTGAGCAGCCGATGGGAC+AGG | 0.503379 | 3.3:-71878855 | None:intergenic |
| TCATACATGGATGAGTTAGC+TGG | 0.503604 | 3.3:+71876298 | MS.gene045203:CDS |
| TAAGCACCTGAAGATCGTTA+AGG | 0.503966 | 3.3:-71876366 | None:intergenic |
| AACTTCCTTCTGAAGTTCAC+TGG | 0.505605 | 3.3:-71877216 | None:intergenic |
| TTTAAAGTTAAATTCATACA+TGG | 0.505813 | 3.3:+71876285 | MS.gene045203:CDS |
| AGTAGAACTTGAGCAGGAAA+AGG | 0.506600 | 3.3:+71873753 | MS.gene045203:CDS |
| CCTTGAAATTAAGGATCTAA+AGG | 0.506692 | 3.3:+71877990 | MS.gene045203:CDS |
| ATCTTCAAGTAATTTAACCT+TGG | 0.507126 | 3.3:-71878286 | None:intergenic |
| ACAAGCCATTGAAGTCTCTC+AGG | 0.507650 | 3.3:-71874084 | None:intergenic |
| ATCATGCATTTATGGCTACT+GGG | 0.509407 | 3.3:+71879791 | MS.gene045203:CDS |
| GGGGTCAATATGAGATGCTC+TGG | 0.509577 | 3.3:-71874580 | None:intergenic |
| AAAGGGATTGGTTCAAGATA+GGG | 0.510256 | 3.3:+71874851 | MS.gene045203:CDS |
| CTTTAGATCCTTAATTTCAA+GGG | 0.511247 | 3.3:-71877989 | None:intergenic |
| GAGACATTGAATACTGAGCT+TGG | 0.512525 | 3.3:+71873721 | MS.gene045203:CDS |
| AAGACAATACTCTATTTCTC+AGG | 0.512716 | 3.3:+71876392 | MS.gene045203:CDS |
| CCATATTTCCCTGTCCGCTA+AGG | 0.513175 | 3.3:+71876486 | MS.gene045203:CDS |
| TTAGCTTCTCAACCTCAAAA+GGG | 0.513254 | 3.3:-71877265 | None:intergenic |
| GATGAGTTAGCTGGAAAGAA+TGG | 0.513461 | 3.3:+71876307 | MS.gene045203:CDS |
| TATAAAAGTAGAACTTGAGC+AGG | 0.517132 | 3.3:+71873747 | MS.gene045203:CDS |
| AGAGTGATGGAGTGCATTGA+TGG | 0.517670 | 3.3:+71875509 | MS.gene045203:CDS |
| ATCTGTAGTTTCTGAATACA+AGG | 0.518659 | 3.3:+71874947 | MS.gene045203:CDS |
| TAAATTAGTTGGAAGTCAGA+AGG | 0.518961 | 3.3:+71878245 | MS.gene045203:CDS |
| TCGGAGCCAGCAGGCAATGA+AGG | 0.519979 | 3.3:-71878369 | None:intergenic |
| CGTGGAAGTTATGAAAGAAA+AGG | 0.522033 | 3.3:+71877097 | MS.gene045203:CDS |
| CATTGATTTGGAAAGAGATA+GGG | 0.523532 | 3.3:+71874989 | MS.gene045203:CDS |
| TTCTCAGCCAGAAATTGTCC+AGG | 0.527602 | 3.3:+71878326 | MS.gene045203:CDS |
| CAACTGAGATGTTGAAAGGA+TGG | 0.528123 | 3.3:-71877776 | None:intergenic |
| TATGCAGGGTATCCGGTAGT+GGG | 0.528956 | 3.3:+71879717 | MS.gene045203:intron |
| CAGTGATTTGATAGTTTCAG+AGG | 0.529388 | 3.3:-71876176 | None:intergenic |
| ACTGGAAGATGCATTGTTGA+AGG | 0.529978 | 3.3:+71876195 | MS.gene045203:CDS |
| TAGAAGAGCTTGACAAGGAA+AGG | 0.530393 | 3.3:+71873689 | MS.gene045203:CDS |
| ACCGTTATCTCCTGTCCCAT+CGG | 0.530894 | 3.3:+71878845 | MS.gene045203:CDS |
| AGCAAATAATGCTAGCAAGT+TGG | 0.532951 | 3.3:+71876147 | MS.gene045203:CDS |
| TTGTCCATGGCAGTTAAGAA+AGG | 0.533076 | 3.3:+71874828 | MS.gene045203:CDS |
| CACGTGCGAAATATGCGAAA+AGG | 0.533243 | 3.3:+71878873 | MS.gene045203:CDS |
| ATCTATAGTTTATGAATACA+AGG | 0.534717 | 3.3:+71875085 | MS.gene045203:CDS |
| TTGACCCCGAATTGTTTGAA+AGG | 0.536921 | 3.3:+71874595 | MS.gene045203:CDS |
| GAGTTACAGATGAAGCAGAC+AGG | 0.537072 | 3.3:+71875963 | MS.gene045203:CDS |
| TTCTGGAGGGCACCTTGAGA+TGG | 0.537268 | 3.3:+71876510 | MS.gene045203:CDS |
| TCCAGAATCCTTAGCGGACA+GGG | 0.538264 | 3.3:-71876494 | None:intergenic |
| TGGCTTGGATACTAATGAGC+AGG | 0.538848 | 3.3:+71873555 | MS.gene045203:CDS |
| TCAGTTATCTCGGAGCCAGC+AGG | 0.539504 | 3.3:-71878378 | None:intergenic |
| TCTTTCCGAGGAGAAAGAGC+AGG | 0.541393 | 3.3:+71875901 | MS.gene045203:CDS |
| TCATTTGGAAAGATTGTGAA+AGG | 0.541515 | 3.3:+71876945 | MS.gene045203:CDS |
| AGATTCACTAAAGACGTCTC+TGG | 0.544951 | 3.3:+71873846 | MS.gene045203:CDS |
| TAATTTAATACCAAGTTCAT+GGG | 0.545588 | 3.3:-71878229 | None:intergenic |
| TGAACTTACTAAAGAGGAGT+TGG | 0.545888 | 3.3:+71873939 | MS.gene045203:CDS |
| TACTTGTTGGTGCTCGTGGT+GGG | 0.546181 | 3.3:+71873590 | MS.gene045203:CDS |
| ATTAACAACACTTGCAAGAG+AGG | 0.546774 | 3.3:-71873401 | None:intergenic |
| AGCCGCTGAACTTACTAAAG+AGG | 0.547967 | 3.3:+71873933 | MS.gene045203:CDS |
| GTTGTAGATAGACAATCTAA+AGG | 0.548135 | 3.3:+71878129 | MS.gene045203:CDS |
| GCCGATGGGACAGGAGATAA+CGG | 0.549161 | 3.3:-71878846 | None:intergenic |
| TGAGAGACTTCAATGGCTTG+TGG | 0.550472 | 3.3:+71874086 | MS.gene045203:CDS |
| TTATAGCACTGAAAGAAGAA+AGG | 0.550801 | 3.3:+71874745 | MS.gene045203:CDS |
| GTCGAACGTGATTAGCTCGT+CGG | 0.552346 | 3.3:-71872952 | None:intergenic |
| ATGGCAGTTAAGAAAGGAAA+GGG | 0.552781 | 3.3:+71874834 | MS.gene045203:CDS |
| CTCTCAACTGAGATGTTGAA+AGG | 0.555057 | 3.3:-71877780 | None:intergenic |
| GTAAGTACCTTTATCATCAT+CGG | 0.555646 | 3.3:-71878961 | None:intergenic |
| GTTGCTGGAGCTCAAGAGAA+AGG | 0.556424 | 3.3:+71873612 | MS.gene045203:CDS |
| AGTTAAGAAAGGAAAGGGAT+TGG | 0.556453 | 3.3:+71874839 | MS.gene045203:CDS |
| GGTCTAAACATGGAAGATGA+AGG | 0.557032 | 3.3:+71874477 | MS.gene045203:CDS |
| AGATATTTCTGTTCTTTCCG+AGG | 0.557522 | 3.3:+71875889 | MS.gene045203:CDS |
| GAAGCACCTTCATTGCCTGC+TGG | 0.557602 | 3.3:+71878363 | MS.gene045203:CDS |
| CAAGAAACTGTAAGCTCCCA+CGG | 0.557983 | 3.3:+71875695 | MS.gene045203:CDS |
| CAGTGATTCGGAAAGAGATA+GGG | 0.557987 | 3.3:+71875127 | MS.gene045203:CDS |
| TCAGATGATGAAACAGGCTC+TGG | 0.558828 | 3.3:-71874183 | None:intergenic |
| GTCTGTAGTTTCTGAATACA+AGG | 0.559029 | 3.3:+71875223 | MS.gene045203:CDS |
| ACTTGAAGACGCTTTATCAC+AGG | 0.560778 | 3.3:+71875859 | MS.gene045203:CDS |
| CGAGATAACTGAAGTTGAAG+AGG | 0.561968 | 3.3:+71878389 | MS.gene045203:CDS |
| CTTTCTCCAAAGAAATCTGA+CGG | 0.562343 | 3.3:-71874422 | None:intergenic |
| CTGAGCCTGCTCTTTCTCCT+CGG | 0.563476 | 3.3:-71875906 | None:intergenic |
| TCACTAAAGACGTCTCTGGC+TGG | 0.563652 | 3.3:+71873850 | MS.gene045203:CDS |
| CACTTTGCGTAATTCCAGGA+AGG | 0.565325 | 3.3:-71874133 | None:intergenic |
| TTGCAAGTGTTGTTAATCAA+GGG | 0.565522 | 3.3:+71873407 | MS.gene045203:CDS |
| TAATGATTCGGAAAGAGATA+GGG | 0.566948 | 3.3:+71875265 | MS.gene045203:CDS |
| AGAAGAGCTTGACAAGGAAA+GGG | 0.568440 | 3.3:+71873690 | MS.gene045203:CDS |
| TTCTACCAGTGAACTTCAGA+AGG | 0.569191 | 3.3:+71877211 | MS.gene045203:CDS |
| ATTCATAAGAGCCCCACTAC+CGG | 0.574029 | 3.3:-71879729 | None:intergenic |
| ACAGTTGCAGTTGGTAAAGG+AGG | 0.576085 | 3.3:+71875637 | MS.gene045203:CDS |
| AACATACTTGTTGGTGCTCG+TGG | 0.576164 | 3.3:+71873586 | MS.gene045203:CDS |
| GTTGCAGTTGGTAAAGGAGG+AGG | 0.577199 | 3.3:+71875640 | MS.gene045203:CDS |
| AGCCAGAAATTGTCCAGGAA+AGG | 0.577510 | 3.3:+71878331 | MS.gene045203:CDS |
| AATCTGTTAATTCAGACTGA+AGG | 0.577595 | 3.3:-71874365 | None:intergenic |
| CAAAGATTATCTTCTTCAGA+GGG | 0.580508 | 3.3:+71875719 | MS.gene045203:CDS |
| ACTGGCCAATGAGTTAAAAG+TGG | 0.583034 | 3.3:+71874710 | MS.gene045203:CDS |
| TTTCGCACGTGAGCAGCCGA+TGG | 0.584574 | 3.3:-71878861 | None:intergenic |
| AATAATGCTAGCAAGTTGGT+AGG | 0.588315 | 3.3:+71876151 | MS.gene045203:CDS |
| CTTCCAGTATATCCTCGTAG+AGG | 0.588319 | 3.3:-71874656 | None:intergenic |
| TCTTGCTCTTGATATTGGTG+TGG | 0.588645 | 3.3:+71878908 | MS.gene045203:CDS |
| ATGAGTCCTAATCTTGCTCT+GGG | 0.589127 | 3.3:-71879755 | None:intergenic |
| GAACGATCAGAGGAGAAGAC+TGG | 0.589437 | 3.3:+71874789 | MS.gene045203:CDS |
| CAATATGAGATGCTCTGGTG+AGG | 0.589768 | 3.3:-71874575 | None:intergenic |
| GATAGAGAATCTAAATGCAA+AGG | 0.590859 | 3.3:+71873279 | MS.gene045203:CDS |
| TGTGACAAAAGGAAAGGCAT+TGG | 0.591898 | 3.3:+71873813 | MS.gene045203:CDS |
| AGCTGCTGATGAAAATGAAG+AGG | 0.592739 | 3.3:+71873001 | MS.gene045203:CDS |
| CCTGGAATTACGCAAAGTGA+AGG | 0.593121 | 3.3:+71874137 | MS.gene045203:CDS |
| TGGAGGGCACCTTGAGATGG+AGG | 0.593233 | 3.3:+71876513 | MS.gene045203:CDS |
| CTCCTCTTTAGTAAGTTCAG+CGG | 0.595348 | 3.3:-71873935 | None:intergenic |
| AATATGAGATGCTCTGGTGA+GGG | 0.599961 | 3.3:-71874574 | None:intergenic |
| GAAAGACCTTGAACGATCAG+AGG | 0.606094 | 3.3:+71874779 | MS.gene045203:CDS |
| TTCGCACGTGAGCAGCCGAT+GGG | 0.606106 | 3.3:-71878860 | None:intergenic |
| TAGTATGGAGTCACATACTT+CGG | 0.607083 | 3.3:+71877855 | MS.gene045203:CDS |
| GGATGACAGGAATAAACTGC+AGG | 0.609595 | 3.3:+71874107 | MS.gene045203:CDS |
| GGAAAGCATTCCAAAGCTAG+AGG | 0.609618 | 3.3:+71875412 | MS.gene045203:CDS |
| AAGAAGATAATCTTTGCCCG+TGG | 0.610274 | 3.3:-71875712 | None:intergenic |
| CTGTCCGCTAAGGATTCTGG+AGG | 0.612441 | 3.3:+71876496 | MS.gene045203:CDS |
| ATACTTGTTGGTGCTCGTGG+TGG | 0.612698 | 3.3:+71873589 | MS.gene045203:CDS |
| TCTGGATTCGTACCGAAGCA+AGG | 0.612897 | 3.3:+71879077 | MS.gene045203:CDS |
| TAACATGTTACAGAGAGTGA+TGG | 0.614906 | 3.3:+71875496 | MS.gene045203:CDS |
| CACCAATATCAAGAGCAAGA+TGG | 0.615353 | 3.3:-71878905 | None:intergenic |
| TAGCTTCTCAACCTCAAAAG+GGG | 0.615577 | 3.3:-71877264 | None:intergenic |
| GAAAGATGATATTTCTACCC+TGG | 0.617313 | 3.3:+71876219 | MS.gene045203:CDS |
| TATGGCTGTGACAAAAGGAA+AGG | 0.617967 | 3.3:+71873807 | MS.gene045203:CDS |
| GAACCCTTTCAAACAATTCG+GGG | 0.618134 | 3.3:-71874599 | None:intergenic |
| GTGCCCTCCAGAATCCTTAG+CGG | 0.618228 | 3.3:-71876500 | None:intergenic |
| CATGGCAGTTAAGAAAGGAA+AGG | 0.618421 | 3.3:+71874833 | MS.gene045203:CDS |
| GCTTAGGGACAAGTTGTCCA+TGG | 0.618962 | 3.3:+71874815 | MS.gene045203:CDS |
| ATGTGAGACCCTGAAGAATG+TGG | 0.620116 | 3.3:+71876438 | MS.gene045203:CDS |
| TGGGAAAATAGTATATATCG+AGG | 0.620582 | 3.3:+71873453 | MS.gene045203:CDS |
| AGAGATAGGGACAATCTACA+AGG | 0.621312 | 3.3:+71875278 | MS.gene045203:CDS |
| GCTTATAGATTCTTCTCACA+AGG | 0.624624 | 3.3:+71874227 | MS.gene045203:CDS |
| AATTGAATAATGGCGTAGCG+GGG | 0.634857 | 3.3:+71873063 | MS.gene045203:CDS |
| TGTAGAGCAACAGTTGCAGT+TGG | 0.636192 | 3.3:+71875628 | MS.gene045203:CDS |
| AAGAAACTGTAAGCTCCCAC+GGG | 0.638197 | 3.3:+71875696 | MS.gene045203:CDS |
| AGAATGCTACCTCCATCTCA+AGG | 0.638406 | 3.3:-71876522 | None:intergenic |
| GAGGCCCAACATGAAAAGGA+TGG | 0.642746 | 3.3:+71873346 | MS.gene045203:CDS |
| TTCGGATTCTCAATCAAATG+GGG | 0.643731 | 3.3:+71872717 | MS.gene045203:CDS |
| AGAAGATAATCTTTGCCCGT+GGG | 0.644429 | 3.3:-71875711 | None:intergenic |
| GTATTGGACGAGTCTAGAAG+TGG | 0.644582 | 3.3:+71873433 | MS.gene045203:CDS |
| TATTGATGACTTAACGACCA+AGG | 0.644949 | 3.3:+71878269 | MS.gene045203:CDS |
| GACGAGCTAATCACGTTCGA+CGG | 0.648618 | 3.3:+71872954 | MS.gene045203:CDS |
| TGTAAAAGAGCTTCTTCACA+GGG | 0.648683 | 3.3:-71877879 | None:intergenic |
| TCATGCATTTATGGCTACTG+GGG | 0.649283 | 3.3:+71879792 | MS.gene045203:CDS |
| ATTGAATAATGGCGTAGCGG+GGG | 0.652154 | 3.3:+71873064 | MS.gene045203:CDS |
| TATTGGACGAGTCTAGAAGT+GGG | 0.652677 | 3.3:+71873434 | MS.gene045203:CDS |
| TGAAGATGTTAAATCTACAG+AGG | 0.663925 | 3.3:+71872908 | MS.gene045203:CDS |
| ATGCAGGGTATCCGGTAGTG+GGG | 0.667035 | 3.3:+71879718 | MS.gene045203:intron |
| AATGGCTATTGTTGAGCACG+TGG | 0.670410 | 3.3:+71877079 | MS.gene045203:CDS |
| ACTTGGACAGTCATTCTCTG+AGG | 0.677988 | 3.3:+71873531 | MS.gene045203:CDS |
| AGAGATAGGGACAATCAACA+AGG | 0.681212 | 3.3:+71875140 | MS.gene045203:CDS |
| GCAGACAAGAGAACTATCAG+AGG | 0.685394 | 3.3:+71875985 | MS.gene045203:CDS |
| GTAGAGCATAAATATCATTG+CGG | 0.687329 | 3.3:-71874251 | None:intergenic |
| AGAGCTTGACAAGGAAAGGG+CGG | 0.695541 | 3.3:+71873693 | MS.gene045203:CDS |
| TGAATTGAATAATGGCGTAG+CGG | 0.698333 | 3.3:+71873061 | MS.gene045203:CDS |
| TGTCCGCTAAGGATTCTGGA+GGG | 0.704120 | 3.3:+71876497 | MS.gene045203:CDS |
| GATCCTGCAAGCTTCATCCG+AGG | 0.704365 | 3.3:+71873327 | MS.gene045203:CDS |
| ATTGGTAGAAGAGCTTGACA+AGG | 0.714538 | 3.3:+71873684 | MS.gene045203:CDS |
| CGAACGTGATTAGCTCGTCG+GGG | 0.724081 | 3.3:-71872950 | None:intergenic |
| GATGACAGGAATAAACTGCA+GGG | 0.740580 | 3.3:+71874108 | MS.gene045203:CDS |
| TCAGGGCTTAAACCTCTACG+AGG | 0.808019 | 3.3:+71874644 | MS.gene045203:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 71872679 | 71879826 | 71872679 | ID=MS.gene045203 |
| chr3.3 | mRNA | 71872679 | 71879826 | 71872679 | ID=MS.gene045203.t1;Parent=MS.gene045203 |
| chr3.3 | exon | 71872679 | 71872777 | 71872679 | ID=MS.gene045203.t1.exon1;Parent=MS.gene045203.t1 |
| chr3.3 | CDS | 71872679 | 71872777 | 71872679 | ID=cds.MS.gene045203.t1;Parent=MS.gene045203.t1 |
| chr3.3 | exon | 71872864 | 71873157 | 71872864 | ID=MS.gene045203.t1.exon2;Parent=MS.gene045203.t1 |
| chr3.3 | CDS | 71872864 | 71873157 | 71872864 | ID=cds.MS.gene045203.t1;Parent=MS.gene045203.t1 |
| chr3.3 | exon | 71873253 | 71876534 | 71873253 | ID=MS.gene045203.t1.exon3;Parent=MS.gene045203.t1 |
| chr3.3 | CDS | 71873253 | 71876534 | 71873253 | ID=cds.MS.gene045203.t1;Parent=MS.gene045203.t1 |
| chr3.3 | exon | 71876840 | 71877662 | 71876840 | ID=MS.gene045203.t1.exon4;Parent=MS.gene045203.t1 |
| chr3.3 | CDS | 71876840 | 71877662 | 71876840 | ID=cds.MS.gene045203.t1;Parent=MS.gene045203.t1 |
| chr3.3 | exon | 71877770 | 71878410 | 71877770 | ID=MS.gene045203.t1.exon5;Parent=MS.gene045203.t1 |
| chr3.3 | CDS | 71877770 | 71878410 | 71877770 | ID=cds.MS.gene045203.t1;Parent=MS.gene045203.t1 |
| chr3.3 | exon | 71878828 | 71878975 | 71878828 | ID=MS.gene045203.t1.exon6;Parent=MS.gene045203.t1 |
| chr3.3 | CDS | 71878828 | 71878975 | 71878828 | ID=cds.MS.gene045203.t1;Parent=MS.gene045203.t1 |
| chr3.3 | exon | 71879051 | 71879132 | 71879051 | ID=MS.gene045203.t1.exon7;Parent=MS.gene045203.t1 |
| chr3.3 | CDS | 71879051 | 71879132 | 71879051 | ID=cds.MS.gene045203.t1;Parent=MS.gene045203.t1 |
| chr3.3 | exon | 71879724 | 71879826 | 71879724 | ID=MS.gene045203.t1.exon8;Parent=MS.gene045203.t1 |
| chr3.3 | CDS | 71879724 | 71879826 | 71879724 | ID=cds.MS.gene045203.t1;Parent=MS.gene045203.t1 |
| Gene Sequence |
| Protein sequence |
