Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046129.t1 | XP_003592786.2 | 97.9 | 438 | 9 | 0 | 1 | 438 | 1 | 438 | 2.30E-247 | 864.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046129.t1 | Q9SR06 | 70.0 | 443 | 128 | 3 | 1 | 438 | 1 | 443 | 3.2e-181 | 636.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046129.t1 | G7IF21 | 97.9 | 438 | 9 | 0 | 1 | 438 | 1 | 438 | 1.7e-247 | 864.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene042025 | MS.gene046129 | PPI |
| MS.gene046129 | MS.gene42910 | PPI |
| MS.gene046129 | MS.gene81197 | PPI |
| MS.gene046129 | MS.gene73008 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046129.t1 | MTR_1g116060 | 97.945 | 438 | 9 | 0 | 1 | 438 | 1 | 438 | 0.0 | 881 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046129.t1 | AT3G04680 | 69.977 | 443 | 128 | 3 | 1 | 438 | 1 | 443 | 0.0 | 649 |
| MS.gene046129.t1 | AT3G04680 | 69.977 | 443 | 128 | 3 | 1 | 438 | 1 | 443 | 0.0 | 649 |
| MS.gene046129.t1 | AT3G04680 | 69.977 | 443 | 128 | 3 | 1 | 438 | 1 | 443 | 0.0 | 649 |
| MS.gene046129.t1 | AT5G39930 | 53.444 | 421 | 191 | 3 | 17 | 435 | 4 | 421 | 3.97e-157 | 451 |
| MS.gene046129.t1 | AT5G11010 | 29.851 | 134 | 90 | 4 | 130 | 259 | 33 | 166 | 1.18e-12 | 68.9 |
| MS.gene046129.t1 | AT5G11010 | 29.851 | 134 | 90 | 4 | 130 | 259 | 33 | 166 | 1.51e-12 | 69.3 |
| MS.gene046129.t1 | AT5G11010 | 29.851 | 134 | 90 | 4 | 130 | 259 | 33 | 166 | 1.51e-12 | 69.3 |
| MS.gene046129.t1 | AT5G11010 | 29.851 | 134 | 90 | 4 | 130 | 259 | 33 | 166 | 1.51e-12 | 69.3 |
Find 130 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAAGCAAGTATTTAATTA+TGG | 0.144919 | 1.1:-81639802 | MS.gene046129:CDS |
| CTTCGTCTTCGACTCCTTAA+TGG | 0.169227 | 1.1:-81643347 | MS.gene046129:CDS |
| TACCCTTATCCTATTACTTC+TGG | 0.205288 | 1.1:+81641633 | None:intergenic |
| GACAATTAAGCAAGTGAAAT+TGG | 0.240765 | 1.1:-81643411 | MS.gene046129:CDS |
| GTTGTTGGACCTTCAGATTC+TGG | 0.241641 | 1.1:-81642616 | MS.gene046129:CDS |
| TCCTATTACTTCTGGACTTC+TGG | 0.246775 | 1.1:+81641641 | None:intergenic |
| GGAAAATTGAGCCAGATTTC+AGG | 0.267757 | 1.1:+81643293 | None:intergenic |
| ACCTTTGTTGACTTGGATAT+TGG | 0.269551 | 1.1:-81642535 | MS.gene046129:CDS |
| GGTGCAGGTCCCGCTGTTAC+TGG | 0.269582 | 1.1:-81643449 | MS.gene046129:CDS |
| AAATCTCAGCGTTTCCATTA+AGG | 0.272061 | 1.1:+81643333 | None:intergenic |
| CCACGCTCTGCCTTGCCAAT+TGG | 0.286604 | 1.1:-81640847 | MS.gene046129:CDS |
| CCAAGCAAGTATTTAATTAT+GGG | 0.286724 | 1.1:-81639801 | MS.gene046129:CDS |
| ATTCAAGGCTGATGTTGTTT+TGG | 0.292392 | 1.1:-81641935 | MS.gene046129:CDS |
| TCCGCGGTATAACCAGTTTC+AGG | 0.300467 | 1.1:+81643122 | None:intergenic |
| CAAGGAGCTCGCGGGGATAC+TGG | 0.343687 | 1.1:-81642213 | MS.gene046129:CDS |
| GTCAAGGATGCTTCTTAGTT+GGG | 0.351155 | 1.1:-81642581 | MS.gene046129:CDS |
| TTATGGTGCAGCAATGTTGC+CGG | 0.356449 | 1.1:-81639980 | MS.gene046129:intron |
| GGCCCTAGGGTGATTGTTGT+TGG | 0.362138 | 1.1:-81642631 | MS.gene046129:CDS |
| GGATCGATGGGCATTTCAAT+TGG | 0.380336 | 1.1:+81642472 | None:intergenic |
| TGTCAAGGATGCTTCTTAGT+TGG | 0.381883 | 1.1:-81642582 | MS.gene046129:CDS |
| CCGAGCTTCCACCTGAAATC+TGG | 0.383905 | 1.1:-81643304 | MS.gene046129:CDS |
| AGTTACGGCGAACTTGAGTC+TGG | 0.395870 | 1.1:+81643268 | None:intergenic |
| AATTTCACTTGCTTAATTGT+CGG | 0.397547 | 1.1:+81643413 | None:intergenic |
| TTTGCTCAGAGACGTGCTTA+AGG | 0.408263 | 1.1:-81641734 | MS.gene046129:CDS |
| AGTCCAGAAGTAATAGGATA+AGG | 0.412890 | 1.1:-81641636 | MS.gene046129:CDS |
| CAAGGGTCTATAACAATTCC+TGG | 0.414153 | 1.1:-81642511 | MS.gene046129:CDS |
| TCAAGTTTCAAGCCATGTTA+AGG | 0.417129 | 1.1:+81639776 | None:intergenic |
| TACCTTGAAATGATCTCATC+AGG | 0.434012 | 1.1:+81640730 | None:intergenic |
| TTGCTCAGAGACGTGCTTAA+GGG | 0.434050 | 1.1:-81641733 | MS.gene046129:CDS |
| ATTTGATTGGTCAGGGCCCT+AGG | 0.434217 | 1.1:-81642645 | MS.gene046129:intron |
| TAACACCATTCCAGCAGCTC+TGG | 0.437054 | 1.1:+81642163 | None:intergenic |
| GCCAGAAGTCCAGAAGTAAT+AGG | 0.441249 | 1.1:-81641642 | MS.gene046129:CDS |
| GTCCAGAAGTAATAGGATAA+GGG | 0.451342 | 1.1:-81641635 | MS.gene046129:intron |
| CCCATAATTAAATACTTGCT+TGG | 0.452098 | 1.1:+81639801 | None:intergenic |
| AATGATCTCATCAGGTTCCT+TGG | 0.459020 | 1.1:+81640738 | None:intergenic |
| AGTTTCACAACATCTACTTT+AGG | 0.461880 | 1.1:+81641706 | None:intergenic |
| GCATGCAATCCGTACATTCA+AGG | 0.462451 | 1.1:-81641950 | MS.gene046129:CDS |
| GACTTCTGGCGGAACTTCAC+AGG | 0.465905 | 1.1:+81641655 | None:intergenic |
| GCAGCAGGTTCTGCTCCAAT+TGG | 0.466934 | 1.1:+81640832 | None:intergenic |
| AATGCCGAGTCCAGAGCTGC+TGG | 0.468900 | 1.1:-81642173 | MS.gene046129:CDS |
| CAACATCAGCCTTGAATGTA+CGG | 0.471086 | 1.1:+81641941 | None:intergenic |
| GTATGGTGCTACCATTGAAA+TGG | 0.476019 | 1.1:-81643153 | MS.gene046129:CDS |
| AATACCATGGGATGGATAGA+AGG | 0.476207 | 1.1:-81642140 | MS.gene046129:CDS |
| GAAGCCCACCTTTGTTGACT+TGG | 0.477215 | 1.1:-81642542 | MS.gene046129:CDS |
| ATGGATGGTACTCCTGAAAC+TGG | 0.480202 | 1.1:-81643134 | MS.gene046129:CDS |
| AGGAGTACCATCCATTTCAA+TGG | 0.480948 | 1.1:+81643142 | None:intergenic |
| GTTGACTTGGATATTGGCCA+AGG | 0.482675 | 1.1:-81642529 | MS.gene046129:CDS |
| GGTCGGGTGGAGTTGTATCT+AGG | 0.483284 | 1.1:-81641678 | MS.gene046129:CDS |
| CAGGAATTGTTATAGACCCT+TGG | 0.485244 | 1.1:+81642512 | None:intergenic |
| TTTGTTTATCGAGTTGGTGG+TGG | 0.488527 | 1.1:-81640880 | MS.gene046129:CDS |
| AGATGACTCTGTATTATCTC+AGG | 0.490721 | 1.1:-81642922 | MS.gene046129:intron |
| GAGGAGAAAGATCATTTGTA+AGG | 0.495205 | 1.1:+81640932 | None:intergenic |
| ACATACCTTACACCATCTGC+TGG | 0.496857 | 1.1:-81639831 | MS.gene046129:CDS |
| TTAATGGCGTATGGCGGTGC+AGG | 0.497042 | 1.1:-81643464 | MS.gene046129:CDS |
| ATACTGGAGAGACAATTTGC+TGG | 0.500426 | 1.1:-81642197 | MS.gene046129:CDS |
| CTTGGAAGTTCTCCAGCAGA+TGG | 0.504121 | 1.1:+81639819 | None:intergenic |
| AATTGAAATGCCCATCGATC+CGG | 0.504848 | 1.1:-81642470 | MS.gene046129:CDS |
| GTTCTCCAGCAGATGGTGTA+AGG | 0.505096 | 1.1:+81639826 | None:intergenic |
| GACTTGTTTGTTTATCGAGT+TGG | 0.507232 | 1.1:-81640886 | MS.gene046129:CDS |
| TAACAGACATTGACATTCAG+AGG | 0.512887 | 1.1:-81639946 | MS.gene046129:intron |
| AAGGCAGAGCGTGGAGCTTG+TGG | 0.519634 | 1.1:+81640856 | None:intergenic |
| CCCTAGTCTTTAATGGCGTA+TGG | 0.520280 | 1.1:-81643473 | None:intergenic |
| AATTCCCTCCACCGGATCGA+TGG | 0.521049 | 1.1:+81642459 | None:intergenic |
| GTTGTGAAACTTCAGAGGTC+GGG | 0.523003 | 1.1:-81641694 | MS.gene046129:CDS |
| CTTAGTTGGGCAGCGAAACA+AGG | 0.524810 | 1.1:-81642568 | MS.gene046129:CDS |
| GTTGGGCAGCGAAACAAGGT+TGG | 0.529364 | 1.1:-81642564 | MS.gene046129:CDS |
| AAATTTGAAATATTAGAATG+AGG | 0.541936 | 1.1:+81640913 | None:intergenic |
| AACTGGTTATACCGCGGATG+AGG | 0.542046 | 1.1:-81643117 | MS.gene046129:intron |
| TCAAGAGGAATTCCCTCCAC+CGG | 0.542450 | 1.1:+81642451 | None:intergenic |
| TTGTTTGTTTATCGAGTTGG+TGG | 0.550368 | 1.1:-81640883 | MS.gene046129:CDS |
| ACATTTACATAACTAACCAT+TGG | 0.551977 | 1.1:+81642993 | None:intergenic |
| ATTCCCTCCACCGGATCGAT+GGG | 0.554654 | 1.1:+81642460 | None:intergenic |
| GTCTGTTACATAGATAAAGC+CGG | 0.555833 | 1.1:+81639961 | None:intergenic |
| TTGACTTGGATATTGGCCAA+GGG | 0.556103 | 1.1:-81642528 | MS.gene046129:CDS |
| CCAATTGGCAAGGCAGAGCG+TGG | 0.557049 | 1.1:+81640847 | None:intergenic |
| GTGCTTGTCAAGGAGCTCGC+GGG | 0.558666 | 1.1:-81642221 | MS.gene046129:CDS |
| ACTCTCGTTGGATCTGCAGC+AGG | 0.559383 | 1.1:+81640817 | None:intergenic |
| CGAGTCCAGAGCTGCTGGAA+TGG | 0.560247 | 1.1:-81642168 | MS.gene046129:CDS |
| AATGCCCATCGATCCGGTGG+AGG | 0.563074 | 1.1:-81642464 | MS.gene046129:CDS |
| CCTTGCTGTCTCATTTGCCA+AGG | 0.564042 | 1.1:-81640755 | MS.gene046129:CDS |
| TTCACAGCTACAACTCTCGT+TGG | 0.566936 | 1.1:+81640805 | None:intergenic |
| CACTCCTTCTATCCATCCCA+TGG | 0.569058 | 1.1:+81642136 | None:intergenic |
| GGAGTGGCAGCAATGCATCC+AGG | 0.569729 | 1.1:+81642493 | None:intergenic |
| TTTGATTGGTCAGGGCCCTA+GGG | 0.570927 | 1.1:-81642644 | MS.gene046129:intron |
| CCAGATTTCAGGTGGAAGCT+CGG | 0.573098 | 1.1:+81643304 | None:intergenic |
| TGTCCATAAAAGTAAACAAG+AGG | 0.573566 | 1.1:+81642424 | None:intergenic |
| TGTTGTGAAACTTCAGAGGT+CGG | 0.573910 | 1.1:-81641695 | MS.gene046129:CDS |
| AACCTGATGAGATCATTTCA+AGG | 0.575187 | 1.1:-81640732 | MS.gene046129:intron |
| TAATTATGGGAACCTTAACA+TGG | 0.575215 | 1.1:-81639788 | MS.gene046129:CDS |
| TTGTTTATCGAGTTGGTGGT+GGG | 0.575272 | 1.1:-81640879 | MS.gene046129:CDS |
| TCGAAGACGAAGAGGTGAGT+CGG | 0.575469 | 1.1:+81643358 | None:intergenic |
| GGTCCAACAACAATCACCCT+AGG | 0.575548 | 1.1:+81642628 | None:intergenic |
| ATGCCCATCGATCCGGTGGA+GGG | 0.575608 | 1.1:-81642463 | MS.gene046129:CDS |
| GCCAATATCCAAGTCAACAA+AGG | 0.588558 | 1.1:+81642534 | None:intergenic |
| TGGTGTTAAATACCATGGGA+TGG | 0.592447 | 1.1:-81642148 | MS.gene046129:CDS |
| AATATCCAAGTCAACAAAGG+TGG | 0.592672 | 1.1:+81642537 | None:intergenic |
| TGAAATGCCCATCGATCCGG+TGG | 0.592811 | 1.1:-81642467 | MS.gene046129:CDS |
| GAATTTGAACCAGTAACAGC+GGG | 0.608811 | 1.1:+81643440 | None:intergenic |
| CTGGAAAGACTACCTTGTCA+AGG | 0.612870 | 1.1:-81642597 | MS.gene046129:CDS |
| ATATCCAAGTCAACAAAGGT+GGG | 0.613831 | 1.1:+81642538 | None:intergenic |
| GTAGTCTTTCCAGAATCTGA+AGG | 0.614463 | 1.1:+81642607 | None:intergenic |
| AAATTGAGCCAGATTTCAGG+TGG | 0.615483 | 1.1:+81643296 | None:intergenic |
| ATTGTATAAAGTGCTTGTCA+AGG | 0.615803 | 1.1:-81642231 | MS.gene046129:CDS |
| GATAATACAGAGTCATCTGA+AGG | 0.618694 | 1.1:+81642927 | None:intergenic |
| GATGGGCATTTCAATTGGAG+TGG | 0.619367 | 1.1:+81642477 | None:intergenic |
| TAAACAAGAGGCATTTCAAG+AGG | 0.619620 | 1.1:+81642436 | None:intergenic |
| CATTCCAGCAGCTCTGGACT+CGG | 0.622880 | 1.1:+81642169 | None:intergenic |
| AGGTTCTGCTCCAATTGGCA+AGG | 0.623138 | 1.1:+81640837 | None:intergenic |
| GTTACGGCGAACTTGAGTCT+GGG | 0.624730 | 1.1:+81643269 | None:intergenic |
| TGCTTGTCAAGGAGCTCGCG+GGG | 0.630947 | 1.1:-81642220 | MS.gene046129:CDS |
| TATTACTTCTGGACTTCTGG+CGG | 0.638427 | 1.1:+81641644 | None:intergenic |
| GTGAAACTTCAGAGGTCGGG+TGG | 0.639286 | 1.1:-81641691 | MS.gene046129:CDS |
| CCTTGGCAAATGAGACAGCA+AGG | 0.641711 | 1.1:+81640755 | None:intergenic |
| ACTAAGAAGCATCCTTGACA+AGG | 0.644015 | 1.1:+81642585 | None:intergenic |
| TGGAATGGTGTTAAATACCA+TGG | 0.644511 | 1.1:-81642153 | MS.gene046129:CDS |
| CATGGGATGGATAGAAGGAG+TGG | 0.650431 | 1.1:-81642135 | MS.gene046129:CDS |
| TAGATGTTGTGAAACTTCAG+AGG | 0.652011 | 1.1:-81641699 | MS.gene046129:CDS |
| ATGAGACAGCAAGGACTGCG+TGG | 0.652105 | 1.1:+81640764 | None:intergenic |
| GGAATGGTGTTAAATACCAT+GGG | 0.654726 | 1.1:-81642152 | MS.gene046129:CDS |
| TTAAGGAGTCGAAGACGAAG+AGG | 0.656307 | 1.1:+81643350 | None:intergenic |
| GTCCAACAACAATCACCCTA+GGG | 0.657175 | 1.1:+81642629 | None:intergenic |
| GGTGCTACCATTGAAATGGA+TGG | 0.657214 | 1.1:-81643149 | MS.gene046129:CDS |
| AGTGCTTGTCAAGGAGCTCG+CGG | 0.657958 | 1.1:-81642222 | MS.gene046129:CDS |
| ATGGGATGGATAGAAGGAGT+GGG | 0.661981 | 1.1:-81642134 | MS.gene046129:CDS |
| TCCTGAAACTGGTTATACCG+CGG | 0.672527 | 1.1:-81643123 | MS.gene046129:CDS |
| CGAATTTGAACCAGTAACAG+CGG | 0.691935 | 1.1:+81643439 | None:intergenic |
| TAGTCTTTAATGGCGTATGG+CGG | 0.711686 | 1.1:-81643470 | None:intergenic |
| ACGGCGAACTTGAGTCTGGG+AGG | 0.717660 | 1.1:+81643272 | None:intergenic |
| TTTATGGACACACATCTCCG+AGG | 0.722635 | 1.1:-81642411 | MS.gene046129:intron |
| AAAGTGATTTACCTCATCCG+CGG | 0.723753 | 1.1:+81643106 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATAAAAATAATATAACTA+AGG | - | chr1.1:81643065-81643084 | MS.gene046129:intron | 10.0% |
| !!! | ATTTTTAAATGTTAGTTAAA+TGG | - | chr1.1:81641708-81641727 | MS.gene046129:CDS | 10.0% |
| !!! | TATTATAATTTTTGTAAACT+TGG | - | chr1.1:81641436-81641455 | MS.gene046129:intron | 10.0% |
| !!! | TTTTTAAATGTTAGTTAAAT+GGG | - | chr1.1:81641709-81641728 | MS.gene046129:CDS | 10.0% |
| !! | ACTGAAAAAAAAGAATTATT+TGG | + | chr1.1:81640975-81640994 | None:intergenic | 15.0% |
| !! | TAAATAGTTGAAAATATGAT+AGG | + | chr1.1:81640869-81640888 | None:intergenic | 15.0% |
| !! | TTAATTAGTTAAAAACAGTT+GGG | - | chr1.1:81642722-81642741 | MS.gene046129:intron | 15.0% |
| !!! | AAATTTGAAATATTAGAATG+AGG | + | chr1.1:81642327-81642346 | None:intergenic | 15.0% |
| !!! | TAAGATTTTTATTAAAGACT+TGG | - | chr1.1:81642872-81642891 | MS.gene046129:intron | 15.0% |
| !!! | TCATATTTTCAACTATTTAT+TGG | - | chr1.1:81640870-81640889 | MS.gene046129:CDS | 15.0% |
| !!! | TCTTATTTTTTTCATTTTAG+AGG | - | chr1.1:81641679-81641698 | MS.gene046129:CDS | 15.0% |
| !!! | TGTTTTTAACTAATTAACAT+AGG | + | chr1.1:81642719-81642738 | None:intergenic | 15.0% |
| !! | AAAACATAAAATTTGAGTGA+AGG | - | chr1.1:81641997-81642016 | MS.gene046129:intron | 20.0% |
| !! | AAAATAAATGAATCTTCCTT+GGG | - | chr1.1:81641401-81641420 | MS.gene046129:intron | 20.0% |
| !! | AAACATAAAATTTGAGTGAA+GGG | - | chr1.1:81641998-81642017 | MS.gene046129:intron | 20.0% |
| !! | AAATAGGTAGAATTAAGTAT+TGG | - | chr1.1:81641947-81641966 | MS.gene046129:CDS | 20.0% |
| !! | AAGCAACAACAAATAATATA+GGG | + | chr1.1:81642622-81642641 | None:intergenic | 20.0% |
| !! | ACATAATTTATTTGTGTGTT+AGG | - | chr1.1:81640051-81640070 | MS.gene046129:intron | 20.0% |
| !! | ATTGAAAATTGGTATAAAAG+AGG | + | chr1.1:81640012-81640031 | None:intergenic | 20.0% |
| !! | GTTAATTAGTTAAAAACAGT+TGG | - | chr1.1:81642721-81642740 | MS.gene046129:intron | 20.0% |
| !! | TAAGTATCAAATGATTTGAT+TGG | - | chr1.1:81640579-81640598 | MS.gene046129:intron | 20.0% |
| !! | TAAGTTCAAAATAACCAAAA+TGG | + | chr1.1:81642903-81642922 | None:intergenic | 20.0% |
| !! | TTCAATTCAACAATAATGTA+AGG | + | chr1.1:81641152-81641171 | None:intergenic | 20.0% |
| !!! | AAAAATCAAGGTATTAGTTA+TGG | + | chr1.1:81641376-81641395 | None:intergenic | 20.0% |
| !!! | AAAATCAAGGTATTAGTTAT+GGG | + | chr1.1:81641375-81641394 | None:intergenic | 20.0% |
| !!! | AGATTTTGTTATGTTGTTTA+TGG | - | chr1.1:81643322-81643341 | MS.gene046129:CDS | 20.0% |
| !!! | ATAGTTCTTTTGAAAATAGT+AGG | - | chr1.1:81642023-81642042 | MS.gene046129:intron | 20.0% |
| !!! | ATGATTTTTATGTGAGAAAT+AGG | - | chr1.1:81641931-81641950 | MS.gene046129:CDS | 20.0% |
| !!! | TATATTATTTGTTGTTGCTT+CGG | - | chr1.1:81642622-81642641 | MS.gene046129:CDS | 20.0% |
| !!! | TTATTTTGAGTGAAAAATCA+AGG | + | chr1.1:81641388-81641407 | None:intergenic | 20.0% |
| !!! | TTTTTTGTTTGTTTTGTGTA+TGG | - | chr1.1:81640416-81640435 | MS.gene046129:intron | 20.0% |
| ! | AAAATTGGTATAAAAGAGGA+TGG | + | chr1.1:81640008-81640027 | None:intergenic | 25.0% |
| ! | AACAATAATGTAAGGTTCAA+AGG | + | chr1.1:81641144-81641163 | None:intergenic | 25.0% |
| ! | AAGATACAATGTAGGAAATT+GGG | + | chr1.1:81643222-81643241 | None:intergenic | 25.0% |
| ! | AATTTCACTTGCTTAATTGT+CGG | + | chr1.1:81639827-81639846 | None:intergenic | 25.0% |
| ! | ACATTTACATAACTAACCAT+TGG | + | chr1.1:81640247-81640266 | None:intergenic | 25.0% |
| ! | AGAAATAAAAGTGACAGAAA+TGG | - | chr1.1:81642845-81642864 | MS.gene046129:intron | 25.0% |
| ! | ATATTGAAAAGTGGAAAAGT+AGG | + | chr1.1:81641632-81641651 | None:intergenic | 25.0% |
| ! | ATGCAGAAAATATTGAAAAG+TGG | + | chr1.1:81641641-81641660 | None:intergenic | 25.0% |
| ! | ATTTCAAGGTAACTATGATT+TGG | - | chr1.1:81642519-81642538 | MS.gene046129:CDS | 25.0% |
| ! | CAAAATAAATGAATCTTCCT+TGG | - | chr1.1:81641400-81641419 | MS.gene046129:intron | 25.0% |
| ! | CCAAGCAAGTATTTAATTAT+GGG | - | chr1.1:81643436-81643455 | MS.gene046129:CDS | 25.0% |
| ! | CTAGCAGAAAAATTGAAAAT+TGG | + | chr1.1:81640023-81640042 | None:intergenic | 25.0% |
| ! | GAAGCAACAACAAATAATAT+AGG | + | chr1.1:81642623-81642642 | None:intergenic | 25.0% |
| ! | TAACATTTGATATGTTGAAG+TGG | + | chr1.1:81641864-81641883 | None:intergenic | 25.0% |
| ! | TAAGATACAATGTAGGAAAT+TGG | + | chr1.1:81643223-81643242 | None:intergenic | 25.0% |
| ! | TATTGAAAAGTGGAAAAGTA+GGG | + | chr1.1:81641631-81641650 | None:intergenic | 25.0% |
| ! | TCCAAGCAAGTATTTAATTA+TGG | - | chr1.1:81643435-81643454 | MS.gene046129:CDS | 25.0% |
| ! | TGATTACTACATCTTGATTA+TGG | - | chr1.1:81641204-81641223 | MS.gene046129:intron | 25.0% |
| !! | AAATCAAGGTATTAGTTATG+GGG | + | chr1.1:81641374-81641393 | None:intergenic | 25.0% |
| !! | AATTACAGCTTTAATTACCT+CGG | + | chr1.1:81640846-81640865 | None:intergenic | 25.0% |
| !! | ACAATTGTTCTTTTCTTTGT+TGG | + | chr1.1:81642679-81642698 | None:intergenic | 25.0% |
| !! | GATTGTATTTTCATTTCCTT+GGG | + | chr1.1:81640951-81640970 | None:intergenic | 25.0% |
| !! | TGATTGTATTTTCATTTCCT+TGG | + | chr1.1:81640952-81640971 | None:intergenic | 25.0% |
| !! | TTAATGTGTCACATCTTTTA+TGG | - | chr1.1:81643240-81643259 | MS.gene046129:intron | 25.0% |
| !! | TTTTAAATTTCAGACACCAA+TGG | - | chr1.1:81640228-81640247 | MS.gene046129:intron | 25.0% |
| !! | TTTTACAATAGAACCTCAAT+GGG | + | chr1.1:81641774-81641793 | None:intergenic | 25.0% |
| !! | TTTTTACAATAGAACCTCAA+TGG | + | chr1.1:81641775-81641794 | None:intergenic | 25.0% |
| !!! | TTTTGTTATGTTGTTTATGG+AGG | - | chr1.1:81643325-81643344 | MS.gene046129:CDS | 25.0% |
| AAAATACCAAAACTGTGTTG+TGG | - | chr1.1:81643028-81643047 | MS.gene046129:intron | 30.0% | |
| AAATATCCAGAAGCAATCTT+TGG | + | chr1.1:81642127-81642146 | None:intergenic | 30.0% | |
| AAATTTCGTTCTTCCAAACA+CGG | + | chr1.1:81640513-81640532 | None:intergenic | 30.0% | |
| AACAATTGTATTAGTCCATG+AGG | - | chr1.1:81642690-81642709 | MS.gene046129:intron | 30.0% | |
| AATATCCAGAAGCAATCTTT+GGG | + | chr1.1:81642126-81642145 | None:intergenic | 30.0% | |
| AATTAACATAGGTTACCTCA+TGG | + | chr1.1:81642708-81642727 | None:intergenic | 30.0% | |
| ACTTACATAGCATTTGCAAA+AGG | - | chr1.1:81641798-81641817 | MS.gene046129:intron | 30.0% | |
| AGATACAATGTAGGAAATTG+GGG | + | chr1.1:81643221-81643240 | None:intergenic | 30.0% | |
| AGTGTGATGCATAATAGATA+AGG | + | chr1.1:81641350-81641369 | None:intergenic | 30.0% | |
| AGTTTCACAACATCTACTTT+AGG | + | chr1.1:81641534-81641553 | None:intergenic | 30.0% | |
| ATATGTTGAAGTGGAATCAT+GGG | + | chr1.1:81641855-81641874 | None:intergenic | 30.0% | |
| CAAGAAAAAAACTAACCCAA+AGG | + | chr1.1:81642166-81642185 | None:intergenic | 30.0% | |
| CACTTCATAATATCAAGTGT+AGG | - | chr1.1:81642653-81642672 | MS.gene046129:intron | 30.0% | |
| CCCATAATTAAATACTTGCT+TGG | + | chr1.1:81643439-81643458 | None:intergenic | 30.0% | |
| CTTGAACGAGTATTAAGATT+TGG | + | chr1.1:81642562-81642581 | None:intergenic | 30.0% | |
| CTTGTAAGCACATATTTGTT+TGG | - | chr1.1:81642084-81642103 | MS.gene046129:intron | 30.0% | |
| GACAATTAAGCAAGTGAAAT+TGG | - | chr1.1:81639826-81639845 | MS.gene046129:CDS | 30.0% | |
| GACACATTAAGATACAATGT+AGG | + | chr1.1:81643230-81643249 | None:intergenic | 30.0% | |
| GAGTTACAAAATAGTTGAAC+AGG | + | chr1.1:81642237-81642256 | None:intergenic | 30.0% | |
| GTTATAGATTTGACGTGTAA+TGG | - | chr1.1:81642992-81643011 | MS.gene046129:CDS | 30.0% | |
| TAATTATGGGAACCTTAACA+TGG | - | chr1.1:81643449-81643468 | MS.gene046129:CDS | 30.0% | |
| TGTCCATAAAAGTAAACAAG+AGG | + | chr1.1:81640816-81640835 | None:intergenic | 30.0% | |
| TTACTACATCTTGATTATGG+TGG | - | chr1.1:81641207-81641226 | MS.gene046129:intron | 30.0% | |
| TTATTATAGATTGCCGTGTT+TGG | - | chr1.1:81640497-81640516 | MS.gene046129:intron | 30.0% | |
| TTTCCTATAAGGAGTTCAAA+CGG | + | chr1.1:81641473-81641492 | None:intergenic | 30.0% | |
| ! | AAAATTCCACAACACAGTTT+TGG | + | chr1.1:81643037-81643056 | None:intergenic | 30.0% |
| ! | ATCAAATGATTTGATTGGTC+AGG | - | chr1.1:81640584-81640603 | MS.gene046129:intron | 30.0% |
| ! | ATTGTATAAAGTGCTTGTCA+AGG | - | chr1.1:81641006-81641025 | MS.gene046129:intron | 30.0% |
| ! | ATTTTTGTAAACTTGGTCTC+AGG | - | chr1.1:81641443-81641462 | MS.gene046129:intron | 30.0% |
| ! | GATATTTTGCTTAGTAGCTT+TGG | - | chr1.1:81642140-81642159 | MS.gene046129:CDS | 30.0% |
| ! | TCAAATGATTTGATTGGTCA+GGG | - | chr1.1:81640585-81640604 | MS.gene046129:intron | 30.0% |
| ! | TGTTAGGTTTTTACTTGGTA+TGG | - | chr1.1:81640067-81640086 | MS.gene046129:intron | 30.0% |
| ! | TTGATGCAGGAATACTTTTA+TGG | - | chr1.1:81642282-81642301 | MS.gene046129:intron | 30.0% |
| ! | TTGTGTGTTAGGTTTTTACT+TGG | - | chr1.1:81640062-81640081 | MS.gene046129:intron | 30.0% |
| ! | TTTTATTGTGTCTCGTGATT+AGG | - | chr1.1:81640346-81640365 | MS.gene046129:intron | 30.0% |
| !! | AAGACTTGGTTTAACCATTT+TGG | - | chr1.1:81642886-81642905 | MS.gene046129:intron | 30.0% |
| !! | ATGCCTCTTGTTTACTTTTA+TGG | - | chr1.1:81640810-81640829 | MS.gene046129:CDS | 30.0% |
| !! | GATTTTCTTTTGAAGGACAA+AGG | + | chr1.1:81642929-81642948 | None:intergenic | 30.0% |
| !!! | AATGTGCATGCTATTTTAGA+AGG | - | chr1.1:81640262-81640281 | MS.gene046129:intron | 30.0% |
| AAAGCCACCTAAATAAGGTT+AGG | + | chr1.1:81643138-81643157 | None:intergenic | 35.0% | |
| AAATCTCAGCGTTTCCATTA+AGG | + | chr1.1:81639907-81639926 | None:intergenic | 35.0% | |
| AACCTGATGAGATCATTTCA+AGG | - | chr1.1:81642505-81642524 | MS.gene046129:CDS | 35.0% | |
| AAGCCACCTAAATAAGGTTA+GGG | + | chr1.1:81643137-81643156 | None:intergenic | 35.0% | |
| AATATCCAAGTCAACAAAGG+TGG | + | chr1.1:81640703-81640722 | None:intergenic | 35.0% | |
| ACCAAAAGAACAAGTAAGAG+AGG | + | chr1.1:81641244-81641263 | None:intergenic | 35.0% | |
| AGATGACTCTGTATTATCTC+AGG | - | chr1.1:81640315-81640334 | MS.gene046129:intron | 35.0% | |
| AGTCCAGAAGTAATAGGATA+AGG | - | chr1.1:81641601-81641620 | MS.gene046129:intron | 35.0% | |
| ATAAATGAATCTTCCTTGGG+AGG | - | chr1.1:81641404-81641423 | MS.gene046129:intron | 35.0% | |
| ATAGCATCACATCTCACAAA+CGG | + | chr1.1:81642966-81642985 | None:intergenic | 35.0% | |
| ATATCCAAGTCAACAAAGGT+GGG | + | chr1.1:81640702-81640721 | None:intergenic | 35.0% | |
| ATTAACTGCAATTAGCAGCT+TGG | + | chr1.1:81641902-81641921 | None:intergenic | 35.0% | |
| CAAAAGAACAAGTAAGAGAG+GGG | + | chr1.1:81641242-81641261 | None:intergenic | 35.0% | |
| CCAAAAGAACAAGTAAGAGA+GGG | + | chr1.1:81641243-81641262 | None:intergenic | 35.0% | |
| GAGGAGAAAGATCATTTGTA+AGG | + | chr1.1:81642308-81642327 | None:intergenic | 35.0% | |
| GATAATACAGAGTCATCTGA+AGG | + | chr1.1:81640313-81640332 | None:intergenic | 35.0% | |
| GATATGTTGAAGTGGAATCA+TGG | + | chr1.1:81641856-81641875 | None:intergenic | 35.0% | |
| GGAAGAACGAAATTTGTGAT+TGG | - | chr1.1:81640518-81640537 | MS.gene046129:intron | 35.0% | |
| GTCCAGAAGTAATAGGATAA+GGG | - | chr1.1:81641602-81641621 | MS.gene046129:intron | 35.0% | |
| GTCTGTTACATAGATAAAGC+CGG | + | chr1.1:81643279-81643298 | None:intergenic | 35.0% | |
| TAACAGACATTGACATTCAG+AGG | - | chr1.1:81643291-81643310 | MS.gene046129:CDS | 35.0% | |
| TACAAAATAGTTGAACAGGC+AGG | + | chr1.1:81642233-81642252 | None:intergenic | 35.0% | |
| TACCCTTATCCTATTACTTC+TGG | + | chr1.1:81641607-81641626 | None:intergenic | 35.0% | |
| TACCTTGAAATGATCTCATC+AGG | + | chr1.1:81642510-81642529 | None:intergenic | 35.0% | |
| TAGATGTTGTGAAACTTCAG+AGG | - | chr1.1:81641538-81641557 | MS.gene046129:intron | 35.0% | |
| TAGGGATCAAACACTATCAT+CGG | + | chr1.1:81642604-81642623 | None:intergenic | 35.0% | |
| TAGTTAAAAACAGTTGGGCA+GGG | - | chr1.1:81642727-81642746 | MS.gene046129:intron | 35.0% | |
| TCAACAAAGCCACCTAAATA+AGG | + | chr1.1:81643143-81643162 | None:intergenic | 35.0% | |
| TCAAGTTTCAAGCCATGTTA+AGG | + | chr1.1:81643464-81643483 | None:intergenic | 35.0% | |
| TGAGATGTGATGCTATATCA+AGG | - | chr1.1:81642970-81642989 | MS.gene046129:CDS | 35.0% | |
| TGGTATAAAAGAGGATGGAA+GGG | + | chr1.1:81640003-81640022 | None:intergenic | 35.0% | |
| TTAGTTAAAAACAGTTGGGC+AGG | - | chr1.1:81642726-81642745 | MS.gene046129:intron | 35.0% | |
| TTGGTATAAAAGAGGATGGA+AGG | + | chr1.1:81640004-81640023 | None:intergenic | 35.0% | |
| TTTCCGTTTGAACTCCTTAT+AGG | - | chr1.1:81641467-81641486 | MS.gene046129:intron | 35.0% | |
| ! | AACGAAATTTGTGATTGGTC+AGG | - | chr1.1:81640523-81640542 | MS.gene046129:intron | 35.0% |
| ! | AATGGAAACGCTGAGATTTT+TGG | - | chr1.1:81639908-81639927 | MS.gene046129:intron | 35.0% |
| ! | ACTGCACAGTTTTTCCTATA+AGG | + | chr1.1:81641484-81641503 | None:intergenic | 35.0% |
| ! | GACTTGTTTGTTTATCGAGT+TGG | - | chr1.1:81642351-81642370 | MS.gene046129:intron | 35.0% |
| ! | GGAATGGTGTTAAATACCAT+GGG | - | chr1.1:81641085-81641104 | MS.gene046129:intron | 35.0% |
| ! | TGCACAGGATTTTCTTTTGA+AGG | + | chr1.1:81642936-81642955 | None:intergenic | 35.0% |
| ! | TGGAATGGTGTTAAATACCA+TGG | - | chr1.1:81641084-81641103 | MS.gene046129:intron | 35.0% |
| !! | AACAGTGCTGATAAATGCAA+AGG | + | chr1.1:81642051-81642070 | None:intergenic | 35.0% |
| !! | ACCTTTGTTGACTTGGATAT+TGG | - | chr1.1:81640702-81640721 | MS.gene046129:intron | 35.0% |
| !! | ATTCAAGGCTGATGTTGTTT+TGG | - | chr1.1:81641302-81641321 | MS.gene046129:intron | 35.0% |
| !! | CTGCTATTTGATTTTGATGC+AGG | - | chr1.1:81642269-81642288 | MS.gene046129:intron | 35.0% |
| !! | CTTTCTTTGAAACTCACTCA+TGG | - | chr1.1:81640172-81640191 | MS.gene046129:intron | 35.0% |
| !! | TAAACAAGAGGCATTTCAAG+AGG | + | chr1.1:81640804-81640823 | None:intergenic | 35.0% |
| !! | TTGTTTGTTTATCGAGTTGG+TGG | - | chr1.1:81642354-81642373 | MS.gene046129:intron | 35.0% |
| !! | TTTCTTTTGAAGGACAAAGG+AGG | + | chr1.1:81642926-81642945 | None:intergenic | 35.0% |
| !!! | GCTGATGTTGTTTTGGTTTT+GGG | - | chr1.1:81641309-81641328 | MS.gene046129:intron | 35.0% |
| AAAGTGATTTACCTCATCCG+CGG | + | chr1.1:81640134-81640153 | None:intergenic | 40.0% | |
| AAATTGAGCCAGATTTCAGG+TGG | + | chr1.1:81639944-81639963 | None:intergenic | 40.0% | |
| AAGAAAATCCTGTGCAAACG+AGG | - | chr1.1:81642940-81642959 | MS.gene046129:CDS | 40.0% | |
| AATACCATGGGATGGATAGA+AGG | - | chr1.1:81641097-81641116 | MS.gene046129:intron | 40.0% | |
| AATCATTAACAGCACACCCA+AGG | - | chr1.1:81640932-81640951 | MS.gene046129:CDS | 40.0% | |
| AATGATCTCATCAGGTTCCT+TGG | + | chr1.1:81642502-81642521 | None:intergenic | 40.0% | |
| AATTGAAATGCCCATCGATC+CGG | - | chr1.1:81640767-81640786 | MS.gene046129:CDS | 40.0% | |
| ACAATGTAGGAAATTGGGGA+TGG | + | chr1.1:81643217-81643236 | None:intergenic | 40.0% | |
| AGGGATCAAACACTATCATC+GGG | + | chr1.1:81642603-81642622 | None:intergenic | 40.0% | |
| AGTGGAATCATGGGAATATG+AGG | + | chr1.1:81641846-81641865 | None:intergenic | 40.0% | |
| ATACTGGAGAGACAATTTGC+TGG | - | chr1.1:81641040-81641059 | MS.gene046129:intron | 40.0% | |
| ATCATGGGAATATGAGGTCA+CGG | + | chr1.1:81641840-81641859 | None:intergenic | 40.0% | |
| CAAACGAATGTGTGTTCATG+TGG | + | chr1.1:81640901-81640920 | None:intergenic | 40.0% | |
| CAACATCAGCCTTGAATGTA+CGG | + | chr1.1:81641299-81641318 | None:intergenic | 40.0% | |
| CAAGGGTCTATAACAATTCC+TGG | - | chr1.1:81640726-81640745 | MS.gene046129:intron | 40.0% | |
| CAATGTAGGAAATTGGGGAT+GGG | + | chr1.1:81643216-81643235 | None:intergenic | 40.0% | |
| CAGGAATTGTTATAGACCCT+TGG | + | chr1.1:81640728-81640747 | None:intergenic | 40.0% | |
| CGAATTTGAACCAGTAACAG+CGG | + | chr1.1:81639801-81639820 | None:intergenic | 40.0% | |
| GAATTTGAACCAGTAACAGC+GGG | + | chr1.1:81639800-81639819 | None:intergenic | 40.0% | |
| GCCAATATCCAAGTCAACAA+AGG | + | chr1.1:81640706-81640725 | None:intergenic | 40.0% | |
| GGAAAATTGAGCCAGATTTC+AGG | + | chr1.1:81639947-81639966 | None:intergenic | 40.0% | |
| GGAAGGGAATAGAAGAGTTA+CGG | + | chr1.1:81639987-81640006 | None:intergenic | 40.0% | |
| GTAGTCTTTCCAGAATCTGA+AGG | + | chr1.1:81640633-81640652 | None:intergenic | 40.0% | |
| GTCAAGGATGCTTCTTAGTT+GGG | - | chr1.1:81640656-81640675 | MS.gene046129:intron | 40.0% | |
| TATCAACCTACTTGCAACAG+CGG | + | chr1.1:81642775-81642794 | None:intergenic | 40.0% | |
| TATTACTTCTGGACTTCTGG+CGG | + | chr1.1:81641596-81641615 | None:intergenic | 40.0% | |
| TCCTATTACTTCTGGACTTC+TGG | + | chr1.1:81641599-81641618 | None:intergenic | 40.0% | |
| TCTCGTGATTAGGAGAAGAT+TGG | - | chr1.1:81640356-81640375 | MS.gene046129:intron | 40.0% | |
| TGGATGCTTCATGTATCTGT+TGG | - | chr1.1:81640376-81640395 | MS.gene046129:intron | 40.0% | |
| TGTCAAGGATGCTTCTTAGT+TGG | - | chr1.1:81640655-81640674 | MS.gene046129:intron | 40.0% | |
| TGTTGTGAAACTTCAGAGGT+CGG | - | chr1.1:81641542-81641561 | MS.gene046129:intron | 40.0% | |
| TTGCAAAAGGCCTATTAGAC+TGG | - | chr1.1:81641811-81641830 | MS.gene046129:intron | 40.0% | |
| ! | CCCTCTCTTACTTGTTCTTT+TGG | - | chr1.1:81641240-81641259 | MS.gene046129:intron | 40.0% |
| ! | GCTTGACCCTAACCTTATTT+AGG | - | chr1.1:81643128-81643147 | MS.gene046129:CDS | 40.0% |
| ! | TGACCCTAACCTTATTTAGG+TGG | - | chr1.1:81643131-81643150 | MS.gene046129:CDS | 40.0% |
| ! | TGGTGTTAAATACCATGGGA+TGG | - | chr1.1:81641089-81641108 | MS.gene046129:intron | 40.0% |
| !! | ACTAAGAAGCATCCTTGACA+AGG | + | chr1.1:81640655-81640674 | None:intergenic | 40.0% |
| !! | AGGAGTACCATCCATTTCAA+TGG | + | chr1.1:81640098-81640117 | None:intergenic | 40.0% |
| !! | CTGTTGCAAGTAGGTTGATA+TGG | - | chr1.1:81642775-81642794 | MS.gene046129:intron | 40.0% |
| !! | GTATGGTGCTACCATTGAAA+TGG | - | chr1.1:81640084-81640103 | MS.gene046129:intron | 40.0% |
| !! | TGCAAGTAGGTTGATATGGA+AGG | - | chr1.1:81642779-81642798 | MS.gene046129:intron | 40.0% |
| !! | TTGACTTGGATATTGGCCAA+GGG | - | chr1.1:81640709-81640728 | MS.gene046129:intron | 40.0% |
| !! | TTGTTTATCGAGTTGGTGGT+GGG | - | chr1.1:81642358-81642377 | MS.gene046129:intron | 40.0% |
| !! | TTTGTTTATCGAGTTGGTGG+TGG | - | chr1.1:81642357-81642376 | MS.gene046129:intron | 40.0% |
| !!! | GGCTGATGTTGTTTTGGTTT+TGG | - | chr1.1:81641308-81641327 | MS.gene046129:intron | 40.0% |
| ACATACCTTACACCATCTGC+TGG | - | chr1.1:81643406-81643425 | MS.gene046129:CDS | 45.0% | |
| AGATAAGGCTACCATCTACC+TGG | + | chr1.1:81641335-81641354 | None:intergenic | 45.0% | |
| AGGAAATTGGGGATGGGAAA+GGG | + | chr1.1:81643210-81643229 | None:intergenic | 45.0% | |
| ATGGATGGTACTCCTGAAAC+TGG | - | chr1.1:81640103-81640122 | MS.gene046129:intron | 45.0% | |
| ATGGGATGGATAGAAGGAGT+GGG | - | chr1.1:81641103-81641122 | MS.gene046129:intron | 45.0% | |
| CAATTTCCGCTGTTGCAAGT+AGG | - | chr1.1:81642766-81642785 | MS.gene046129:intron | 45.0% | |
| CATTGCCCAAAGATTGCTTC+TGG | - | chr1.1:81642118-81642137 | MS.gene046129:intron | 45.0% | |
| CTGGAAAGACTACCTTGTCA+AGG | - | chr1.1:81640640-81640659 | MS.gene046129:intron | 45.0% | |
| CTTCGTCTTCGACTCCTTAA+TGG | - | chr1.1:81639890-81639909 | MS.gene046129:intron | 45.0% | |
| GATGGGCATTTCAATTGGAG+TGG | + | chr1.1:81640763-81640782 | None:intergenic | 45.0% | |
| GCATGCAATCCGTACATTCA+AGG | - | chr1.1:81641287-81641306 | MS.gene046129:intron | 45.0% | |
| GCCAGAAGTCCAGAAGTAAT+AGG | - | chr1.1:81641595-81641614 | MS.gene046129:intron | 45.0% | |
| GGATCGATGGGCATTTCAAT+TGG | + | chr1.1:81640768-81640787 | None:intergenic | 45.0% | |
| GTCCAACAACAATCACCCTA+GGG | + | chr1.1:81640611-81640630 | None:intergenic | 45.0% | |
| GTGAATGTTACGAATGCCCA+AGG | + | chr1.1:81642202-81642221 | None:intergenic | 45.0% | |
| GTTGTGAAACTTCAGAGGTC+GGG | - | chr1.1:81641543-81641562 | MS.gene046129:intron | 45.0% | |
| GTTGTTGGACCTTCAGATTC+TGG | - | chr1.1:81640621-81640640 | MS.gene046129:intron | 45.0% | |
| TAGGAAATTGGGGATGGGAA+AGG | + | chr1.1:81643211-81643230 | None:intergenic | 45.0% | |
| TCATGGGAATATGAGGTCAC+GGG | + | chr1.1:81641839-81641858 | None:intergenic | 45.0% | |
| TCCTGAAACTGGTTATACCG+CGG | - | chr1.1:81640114-81640133 | MS.gene046129:intron | 45.0% | |
| TTAAGGAGTCGAAGACGAAG+AGG | + | chr1.1:81639890-81639909 | None:intergenic | 45.0% | |
| TTATGGTGCAGCAATGTTGC+CGG | - | chr1.1:81643257-81643276 | MS.gene046129:intron | 45.0% | |
| TTCACAGCTACAACTCTCGT+TGG | + | chr1.1:81642435-81642454 | None:intergenic | 45.0% | |
| TTGCTCAGAGACGTGCTTAA+GGG | - | chr1.1:81641504-81641523 | MS.gene046129:intron | 45.0% | |
| TTTATGGACACACATCTCCG+AGG | - | chr1.1:81640826-81640845 | MS.gene046129:CDS | 45.0% | |
| TTTGCTCAGAGACGTGCTTA+AGG | - | chr1.1:81641503-81641522 | MS.gene046129:intron | 45.0% | |
| ! | AATATACAGAGCACCTCCCA+AGG | + | chr1.1:81641420-81641439 | None:intergenic | 45.0% |
| ! | GGTGCTACCATTGAAATGGA+TGG | - | chr1.1:81640088-81640107 | MS.gene046129:intron | 45.0% |
| ! | TTGTTTTCTCCCTGCTCCTT+GGG | - | chr1.1:81642183-81642202 | MS.gene046129:CDS | 45.0% |
| !! | CTTTGAAACTCACTCATGGC+TGG | - | chr1.1:81640176-81640195 | MS.gene046129:intron | 45.0% |
| !! | GCTTAGTAGCTTTGGCCTTT+GGG | - | chr1.1:81642148-81642167 | MS.gene046129:CDS | 45.0% |
| !! | GTTGACTTGGATATTGGCCA+AGG | - | chr1.1:81640708-81640727 | MS.gene046129:intron | 45.0% |
| !! | TGCTTAGTAGCTTTGGCCTT+TGG | - | chr1.1:81642147-81642166 | MS.gene046129:CDS | 45.0% |
| !!! | TGTTGTTTTGGTTTTGGGCC+AGG | - | chr1.1:81641314-81641333 | MS.gene046129:intron | 45.0% |
| AACTGGTTATACCGCGGATG+AGG | - | chr1.1:81640120-81640139 | MS.gene046129:intron | 50.0% | |
| AGGTTCTGCTCCAATTGGCA+AGG | + | chr1.1:81642403-81642422 | None:intergenic | 50.0% | |
| AGTTACGGCGAACTTGAGTC+TGG | + | chr1.1:81639972-81639991 | None:intergenic | 50.0% | |
| CACTCCTTCTATCCATCCCA+TGG | + | chr1.1:81641104-81641123 | None:intergenic | 50.0% | |
| CATGGGATGGATAGAAGGAG+TGG | - | chr1.1:81641102-81641121 | MS.gene046129:intron | 50.0% | |
| CCTTGGCAAATGAGACAGCA+AGG | + | chr1.1:81642485-81642504 | None:intergenic | 50.0% | |
| CTTAGTTGGGCAGCGAAACA+AGG | - | chr1.1:81640669-81640688 | MS.gene046129:intron | 50.0% | |
| CTTGGAAGTTCTCCAGCAGA+TGG | + | chr1.1:81643421-81643440 | None:intergenic | 50.0% | |
| GCAAGTTGTAACCACAGTGG+GGG | - | chr1.1:81641731-81641750 | MS.gene046129:CDS | 50.0% | |
| GGCAAGTTGTAACCACAGTG+GGG | - | chr1.1:81641730-81641749 | MS.gene046129:CDS | 50.0% | |
| GGGCAAGTTGTAACCACAGT+GGG | - | chr1.1:81641729-81641748 | MS.gene046129:CDS | 50.0% | |
| GGTCCAACAACAATCACCCT+AGG | + | chr1.1:81640612-81640631 | None:intergenic | 50.0% | |
| GTAACCACAGTGGGGGTTTA+GGG | - | chr1.1:81641738-81641757 | MS.gene046129:CDS | 50.0% | |
| GTCACGGGTTCCAGTCTAAT+AGG | + | chr1.1:81641824-81641843 | None:intergenic | 50.0% | |
| GTTACGGCGAACTTGAGTCT+GGG | + | chr1.1:81639971-81639990 | None:intergenic | 50.0% | |
| GTTCTCCAGCAGATGGTGTA+AGG | + | chr1.1:81643414-81643433 | None:intergenic | 50.0% | |
| TAACACCATTCCAGCAGCTC+TGG | + | chr1.1:81641077-81641096 | None:intergenic | 50.0% | |
| TCAAGAGGAATTCCCTCCAC+CGG | + | chr1.1:81640789-81640808 | None:intergenic | 50.0% | |
| TCCGCGGTATAACCAGTTTC+AGG | + | chr1.1:81640118-81640137 | None:intergenic | 50.0% | |
| TCGAAGACGAAGAGGTGAGT+CGG | + | chr1.1:81639882-81639901 | None:intergenic | 50.0% | |
| TGAAACTCACTCATGGCTGG+CGG | - | chr1.1:81640179-81640198 | MS.gene046129:intron | 50.0% | |
| TGGGCAAGTTGTAACCACAG+TGG | - | chr1.1:81641728-81641747 | MS.gene046129:CDS | 50.0% | |
| TGTAACCACAGTGGGGGTTT+AGG | - | chr1.1:81641737-81641756 | MS.gene046129:CDS | 50.0% | |
| TTACGAATGCCCAAGGAGCA+GGG | + | chr1.1:81642195-81642214 | None:intergenic | 50.0% | |
| ! | ATTTGATTGGTCAGGGCCCT+AGG | - | chr1.1:81640592-81640611 | MS.gene046129:intron | 50.0% |
| ! | CCAGATTTCAGGTGGAAGCT+CGG | + | chr1.1:81639936-81639955 | None:intergenic | 50.0% |
| ! | CCTTGCTGTCTCATTTGCCA+AGG | - | chr1.1:81642482-81642501 | MS.gene046129:CDS | 50.0% |
| ! | GAAGCCCACCTTTGTTGACT+TGG | - | chr1.1:81640695-81640714 | MS.gene046129:intron | 50.0% |
| ! | TTTGATTGGTCAGGGCCCTA+GGG | - | chr1.1:81640593-81640612 | MS.gene046129:intron | 50.0% |
| !! | CTTGTTTTCTCCCTGCTCCT+TGG | - | chr1.1:81642182-81642201 | MS.gene046129:CDS | 50.0% |
| !!! | TTGGTTTTGGGCCAGGTAGA+TGG | - | chr1.1:81641321-81641340 | MS.gene046129:intron | 50.0% |
| AAAACAGTTGGGCAGGGAGC+TGG | - | chr1.1:81642733-81642752 | MS.gene046129:intron | 55.0% | |
| AAACAGTTGGGCAGGGAGCT+GGG | - | chr1.1:81642734-81642753 | MS.gene046129:intron | 55.0% | |
| AATTCCCTCCACCGGATCGA+TGG | + | chr1.1:81640781-81640800 | None:intergenic | 55.0% | |
| ACAAACGGCCTCGTTTGCAC+AGG | + | chr1.1:81642951-81642970 | None:intergenic | 55.0% | |
| ACTCTCGTTGGATCTGCAGC+AGG | + | chr1.1:81642423-81642442 | None:intergenic | 55.0% | |
| AGTGCTTGTCAAGGAGCTCG+CGG | - | chr1.1:81641015-81641034 | MS.gene046129:intron | 55.0% | |
| ATGAGACAGCAAGGACTGCG+TGG | + | chr1.1:81642476-81642495 | None:intergenic | 55.0% | |
| ATTCCCTCCACCGGATCGAT+GGG | + | chr1.1:81640780-81640799 | None:intergenic | 55.0% | |
| CCGAGCTTCCACCTGAAATC+TGG | - | chr1.1:81639933-81639952 | MS.gene046129:intron | 55.0% | |
| GACTTCTGGCGGAACTTCAC+AGG | + | chr1.1:81641585-81641604 | None:intergenic | 55.0% | |
| GCAGCAGGTTCTGCTCCAAT+TGG | + | chr1.1:81642408-81642427 | None:intergenic | 55.0% | |
| GGCCCTAGGGTGATTGTTGT+TGG | - | chr1.1:81640606-81640625 | MS.gene046129:intron | 55.0% | |
| GGGAAGGTTTGAGCCCATTG+AGG | - | chr1.1:81641758-81641777 | MS.gene046129:intron | 55.0% | |
| GGTCGGGTGGAGTTGTATCT+AGG | - | chr1.1:81641559-81641578 | MS.gene046129:intron | 55.0% | |
| GTGAAACTTCAGAGGTCGGG+TGG | - | chr1.1:81641546-81641565 | MS.gene046129:intron | 55.0% | |
| GTTACGAATGCCCAAGGAGC+AGG | + | chr1.1:81642196-81642215 | None:intergenic | 55.0% | |
| GTTGGGCAGCGAAACAAGGT+TGG | - | chr1.1:81640673-81640692 | MS.gene046129:intron | 55.0% | |
| TAACAAGTGCGAGTGCCCCT+CGG | - | chr1.1:81643095-81643114 | MS.gene046129:intron | 55.0% | |
| TCAAGCTAACCAGTGCCCGA+GGG | + | chr1.1:81643114-81643133 | None:intergenic | 55.0% | |
| TGAAATGCCCATCGATCCGG+TGG | - | chr1.1:81640770-81640789 | MS.gene046129:CDS | 55.0% | |
| !! | CATTCCAGCAGCTCTGGACT+CGG | + | chr1.1:81641071-81641090 | None:intergenic | 55.0% |
| AACAAGTGCGAGTGCCCCTC+GGG | - | chr1.1:81643096-81643115 | MS.gene046129:intron | 60.0% | |
| AAGGCAGAGCGTGGAGCTTG+TGG | + | chr1.1:81642384-81642403 | None:intergenic | 60.0% | |
| AATGCCCATCGATCCGGTGG+AGG | - | chr1.1:81640773-81640792 | MS.gene046129:CDS | 60.0% | |
| AATGCCGAGTCCAGAGCTGC+TGG | - | chr1.1:81641064-81641083 | MS.gene046129:intron | 60.0% | |
| ACGGCGAACTTGAGTCTGGG+AGG | + | chr1.1:81639968-81639987 | None:intergenic | 60.0% | |
| ATGCCCATCGATCCGGTGGA+GGG | - | chr1.1:81640774-81640793 | MS.gene046129:CDS | 60.0% | |
| CAAGCTAACCAGTGCCCGAG+GGG | + | chr1.1:81643113-81643132 | None:intergenic | 60.0% | |
| CCAATTGGCAAGGCAGAGCG+TGG | + | chr1.1:81642393-81642412 | None:intergenic | 60.0% | |
| CCACAGTGGGGGTTTAGGGA+AGG | - | chr1.1:81641742-81641761 | MS.gene046129:CDS | 60.0% | |
| CCACGCTCTGCCTTGCCAAT+TGG | - | chr1.1:81642390-81642409 | MS.gene046129:intron | 60.0% | |
| CCTTCCCTAAACCCCCACTG+TGG | + | chr1.1:81641745-81641764 | None:intergenic | 60.0% | |
| CGAGTCCAGAGCTGCTGGAA+TGG | - | chr1.1:81641069-81641088 | MS.gene046129:intron | 60.0% | |
| GGAGTGGCAGCAATGCATCC+AGG | + | chr1.1:81640747-81640766 | None:intergenic | 60.0% | |
| GTCAAGCTAACCAGTGCCCG+AGG | + | chr1.1:81643115-81643134 | None:intergenic | 60.0% | |
| GTGCTTGTCAAGGAGCTCGC+GGG | - | chr1.1:81641016-81641035 | MS.gene046129:intron | 60.0% | |
| TGCTTGTCAAGGAGCTCGCG+GGG | - | chr1.1:81641017-81641036 | MS.gene046129:intron | 60.0% | |
| CAAGGAGCTCGCGGGGATAC+TGG | - | chr1.1:81641024-81641043 | MS.gene046129:intron | 65.0% | |
| CTCACTCATGGCTGGCGGAG+AGG | - | chr1.1:81640184-81640203 | MS.gene046129:intron | 65.0% | |
| GGTGCAGGTCCCGCTGTTAC+TGG | - | chr1.1:81639788-81639807 | MS.gene046129:CDS | 65.0% | |
| TGCGAGTGCCCCTCGGGCAC+TGG | - | chr1.1:81643102-81643121 | MS.gene046129:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 81639776 | 81643483 | 81639776 | ID=MS.gene046129 |
| chr1.1 | mRNA | 81639776 | 81643483 | 81639776 | ID=MS.gene046129.t1;Parent=MS.gene046129 |
| chr1.1 | exon | 81643274 | 81643483 | 81643274 | ID=MS.gene046129.t1.exon1;Parent=MS.gene046129.t1 |
| chr1.1 | CDS | 81643274 | 81643483 | 81643274 | ID=cds.MS.gene046129.t1;Parent=MS.gene046129.t1 |
| chr1.1 | exon | 81643118 | 81643186 | 81643118 | ID=MS.gene046129.t1.exon2;Parent=MS.gene046129.t1 |
| chr1.1 | CDS | 81643118 | 81643186 | 81643118 | ID=cds.MS.gene046129.t1;Parent=MS.gene046129.t1 |
| chr1.1 | exon | 81642923 | 81643018 | 81642923 | ID=MS.gene046129.t1.exon3;Parent=MS.gene046129.t1 |
| chr1.1 | CDS | 81642923 | 81643018 | 81642923 | ID=cds.MS.gene046129.t1;Parent=MS.gene046129.t1 |
| chr1.1 | exon | 81642412 | 81642653 | 81642412 | ID=MS.gene046129.t1.exon4;Parent=MS.gene046129.t1 |
| chr1.1 | CDS | 81642412 | 81642653 | 81642412 | ID=cds.MS.gene046129.t1;Parent=MS.gene046129.t1 |
| chr1.1 | exon | 81642127 | 81642265 | 81642127 | ID=MS.gene046129.t1.exon5;Parent=MS.gene046129.t1 |
| chr1.1 | CDS | 81642127 | 81642265 | 81642127 | ID=cds.MS.gene046129.t1;Parent=MS.gene046129.t1 |
| chr1.1 | exon | 81641924 | 81641980 | 81641924 | ID=MS.gene046129.t1.exon6;Parent=MS.gene046129.t1 |
| chr1.1 | CDS | 81641924 | 81641980 | 81641924 | ID=cds.MS.gene046129.t1;Parent=MS.gene046129.t1 |
| chr1.1 | exon | 81641636 | 81641770 | 81641636 | ID=MS.gene046129.t1.exon7;Parent=MS.gene046129.t1 |
| chr1.1 | CDS | 81641636 | 81641770 | 81641636 | ID=cds.MS.gene046129.t1;Parent=MS.gene046129.t1 |
| chr1.1 | exon | 81640733 | 81640968 | 81640733 | ID=MS.gene046129.t1.exon8;Parent=MS.gene046129.t1 |
| chr1.1 | CDS | 81640733 | 81640968 | 81640733 | ID=cds.MS.gene046129.t1;Parent=MS.gene046129.t1 |
| chr1.1 | exon | 81639947 | 81639991 | 81639947 | ID=MS.gene046129.t1.exon9;Parent=MS.gene046129.t1 |
| chr1.1 | CDS | 81639947 | 81639991 | 81639947 | ID=cds.MS.gene046129.t1;Parent=MS.gene046129.t1 |
| chr1.1 | exon | 81639776 | 81639863 | 81639776 | ID=MS.gene046129.t1.exon10;Parent=MS.gene046129.t1 |
| chr1.1 | CDS | 81639776 | 81639863 | 81639776 | ID=cds.MS.gene046129.t1;Parent=MS.gene046129.t1 |
| Gene Sequence |
| Protein sequence |
