AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene047299

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047299.t1 MTR_2g026310 97.096 551 15 1 1 551 1 550 0.0 1110
MS.gene047299.t1 MTR_2g026380 68.727 534 109 4 19 551 18 494 0.0 728
MS.gene047299.t1 MTR_7g063290 70.522 536 88 6 19 551 18 486 0.0 700
MS.gene047299.t1 MTR_3g082790 52.338 556 227 8 18 549 20 561 0.0 542
MS.gene047299.t1 MTR_3g082790 52.453 530 216 6 42 549 6 521 0.0 528
MS.gene047299.t1 MTR_3g081360 51.977 531 230 7 19 549 5 510 0.0 526
MS.gene047299.t1 MTR_3g081420 72.596 208 56 1 344 551 2 208 2.45e-100 302
MS.gene047299.t1 MTR_3g081380 60.494 162 62 1 19 178 16 177 8.87e-67 215
MS.gene047299.t1 MTR_7g062030 82.500 80 14 0 17 96 30 109 2.41e-36 132
MS.gene047299.t1 MTR_3g081390 65.556 90 31 0 90 179 36 125 2.15e-32 121
MS.gene047299.t1 MTR_3g081410 61.607 112 38 2 377 483 1 112 8.38e-31 117
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047299.t1 AT4G16420 58.993 556 151 10 1 552 1 483 0.0 633
MS.gene047299.t1 AT4G16420 58.750 560 150 11 1 552 1 487 0.0 629
MS.gene047299.t1 AT4G16420 58.497 559 152 10 1 552 1 486 0.0 628
MS.gene047299.t1 AT3G07740 46.516 574 254 11 1 550 1 545 5.18e-160 468
MS.gene047299.t1 AT3G07740 47.584 538 231 9 35 550 16 524 9.44e-158 461
MS.gene047299.t1 AT3G07740 45.783 581 255 12 1 550 1 552 3.56e-157 460
MS.gene047299.t1 AT3G07740 47.410 502 214 8 70 550 2 474 3.11e-143 422

Find 134 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCATTTCTTGAGGAATT+TGG 0.167298 2.1:+63805362 None:intergenic
TCTCCAATGGACAGAGATTT+TGG 0.183129 2.1:-63805395 MS.gene047299:CDS
TATATTGTAGGGTCAGATTC+TGG 0.192149 2.1:-63805635 MS.gene047299:intron
ACTCGCCGAAATGGAGTTTA+AGG 0.210601 2.1:-63805258 MS.gene047299:CDS
AAATGTATGGCATGGGAAAC+TGG 0.255134 2.1:-63806546 MS.gene047299:CDS
TTGACTTCTAATATGAATTC+AGG 0.263830 2.1:-63805736 MS.gene047299:intron
AAATCCTTCTCAAATGGATT+TGG 0.279560 2.1:+63805042 None:intergenic
TCAATACATAAGTCAAAATC+TGG 0.298397 2.1:+63807321 None:intergenic
GCATGAACATGTCATATTTC+CGG 0.301157 2.1:+63804995 None:intergenic
TCAGCATCATTATCATATTC+AGG 0.301408 2.1:+63805287 None:intergenic
GAAAAGAATTCAAGAGCTTA+AGG 0.302238 2.1:-63804908 MS.gene047299:intron
AACCAAAAGGCATCCAATAA+AGG 0.306706 2.1:-63805578 MS.gene047299:CDS
TGCTGCGCATTTATTCAAAA+AGG 0.307711 2.1:-63805196 MS.gene047299:intron
AAGAAATGAAGGCCCTTCTT+TGG 0.309899 2.1:-63805351 MS.gene047299:CDS
GCCCTTTATTGGATGCCTTT+TGG 0.311044 2.1:+63805576 None:intergenic
ACAAAAGCAATCATTCTTAC+AGG 0.313342 2.1:-63807266 MS.gene047299:CDS
TGGTCCTGGAATTGTTAAAA+TGG 0.329731 2.1:-63805543 MS.gene047299:CDS
TTTGGAACCCCGTGATTGTT+CGG 0.334438 2.1:+63804666 None:intergenic
CTCCCCGTTCTTCCCTCTTC+CGG 0.336302 2.1:-63806449 MS.gene047299:intron
TCCCTCTCATTTGCCCAGAC+TGG 0.349166 2.1:-63806741 MS.gene047299:CDS
TCTGGAGACATTAATGCATT+TGG 0.356050 2.1:+63804648 None:intergenic
TCATCATCTGCATTCCAGTC+TGG 0.356882 2.1:+63806727 None:intergenic
TTGGAACCCCGTGATTGTTC+GGG 0.365263 2.1:+63804667 None:intergenic
ATGCTCATTAAGAAGGGAAT+TGG 0.386721 2.1:-63804281 MS.gene047299:CDS
CAGCCTTACTTGACTCTAGA+TGG 0.387712 2.1:+63805866 None:intergenic
ATGGATGCAACTGGATACTA+TGG 0.389391 2.1:-63804582 MS.gene047299:CDS
CTCTTGCATCTTCAGATAAA+CGG 0.389633 2.1:+63804406 None:intergenic
GTCAAGTTCTGTCAATGAAA+TGG 0.399893 2.1:-63804601 MS.gene047299:CDS
GGTGTTAAATCCTTCTCAAA+TGG 0.404781 2.1:+63805036 None:intergenic
AGTGGAGATAATTCAGAATC+TGG 0.407331 2.1:-63808387 MS.gene047299:CDS
TACTGTAATAAAGATATTAC+AGG 0.419202 2.1:-63807372 MS.gene047299:CDS
TAGGACATGTCTCATGTTGT+TGG 0.423324 2.1:-63806339 MS.gene047299:CDS
ATACCGGAAGAGGGAAGAAC+GGG 0.423481 2.1:+63806446 None:intergenic
ATGGAAGATTCCAACAAATC+TGG 0.423508 2.1:-63805772 MS.gene047299:CDS
AATTCAGAATCTGGAGTTGC+AGG 0.426709 2.1:-63808378 MS.gene047299:intron
GCCAGTGGAACCAGATTTGT+TGG 0.430345 2.1:+63805762 None:intergenic
AGAACTTGACCCTGCAGGTC+TGG 0.440690 2.1:+63804614 None:intergenic
AACGTTTGTGCTGCGAGTTA+AGG 0.442285 2.1:-63804439 MS.gene047299:CDS
ATATTGTAGGGTCAGATTCT+GGG 0.444203 2.1:-63805634 MS.gene047299:intron
CTTGACTCTAGATGGAGAAA+AGG 0.444237 2.1:+63805874 None:intergenic
AAGCATGCATAGAACACTAT+AGG 0.446368 2.1:-63806486 MS.gene047299:CDS
GTCAATGAAATGGATGCAAC+TGG 0.450262 2.1:-63804591 MS.gene047299:CDS
CATCATCTGCATTCCAGTCT+GGG 0.453025 2.1:+63806728 None:intergenic
GGTCTGGTACCAGCAGAGTC+TGG 0.454618 2.1:+63804630 None:intergenic
GTTCATGCGCTTTCATACTA+AGG 0.455273 2.1:-63804980 MS.gene047299:CDS
CATGGGAGATCTTAGCATAA+AGG 0.456713 2.1:-63805906 MS.gene047299:CDS
CTATCTGTACAAATGATTGC+TGG 0.459385 2.1:-63804380 MS.gene047299:CDS
AGTGTCCTTAAACTCCATTT+CGG 0.467485 2.1:+63805253 None:intergenic
ACCAAAAGGCATCCAATAAA+GGG 0.468979 2.1:-63805577 MS.gene047299:CDS
TCTTGCCATGGCGAAAGGGC+AGG 0.472164 2.1:-63806298 MS.gene047299:CDS
ATGTGGTCCCGAACAATCAC+GGG 0.473554 2.1:-63804674 MS.gene047299:CDS
CCTCCAAAATCTCTGTCCAT+TGG 0.475110 2.1:+63805392 None:intergenic
CAGCAATCATTTGTACAGAT+AGG 0.483057 2.1:+63804381 None:intergenic
TGGATACCATCAAAATTGAC+AGG 0.484436 2.1:-63804313 MS.gene047299:CDS
TGTGAGTCAGGTCAAGGAGC+AGG 0.487841 2.1:-63807426 MS.gene047299:intron
AGGACATGTCTCATGTTGTT+GGG 0.493324 2.1:-63806338 MS.gene047299:CDS
TGCAGCTAGTGCTAACCAAA+AGG 0.494192 2.1:-63805591 MS.gene047299:CDS
AAGGAGCAGGTGAAGCGAAA+AGG 0.494331 2.1:-63807413 MS.gene047299:CDS
TCGCAGGAAGCTCGTGCTGC+TGG 0.496946 2.1:-63804789 MS.gene047299:intron
AACTTCTTGCCATGGCGAAA+GGG 0.496960 2.1:-63806302 MS.gene047299:CDS
GTATGATATGCTCATTAAGA+AGG 0.500449 2.1:-63804288 MS.gene047299:CDS
AGTTGAAGCAGATAGATATC+TGG 0.502448 2.1:-63804754 MS.gene047299:CDS
TGGTTATAACGCGAAAAGAC+AGG 0.504452 2.1:-63805318 MS.gene047299:CDS
GGCACATGGCACACTTGATA+CGG 0.505024 2.1:+63807343 None:intergenic
CCACTGATTTCAACCAAAGA+AGG 0.505240 2.1:+63805338 None:intergenic
TGAGCAATTACTCGCCGAAA+TGG 0.506718 2.1:-63805267 MS.gene047299:CDS
CCAAATTCCTCAAGAAATGA+AGG 0.508733 2.1:-63805362 MS.gene047299:CDS
AAAGCCTGACATACCGGAAG+AGG 0.510365 2.1:+63806436 None:intergenic
AGGAGCAGGTGAAGCGAAAA+GGG 0.511931 2.1:-63807412 MS.gene047299:CDS
TTGACTCTAGATGGAGAAAA+GGG 0.511968 2.1:+63805875 None:intergenic
TCCAACAAATCTGGTTCCAC+TGG 0.512061 2.1:-63805763 MS.gene047299:CDS
AAAGGCATCCAATAAAGGGC+GGG 0.512200 2.1:-63805573 MS.gene047299:CDS
GAACTTCTTGCCATGGCGAA+AGG 0.516288 2.1:-63806303 MS.gene047299:CDS
ATCTTCAGATAAACGGTTGG+AGG 0.520579 2.1:+63804413 None:intergenic
GGGAATAGAAATGTATGGCA+TGG 0.523916 2.1:-63806554 MS.gene047299:CDS
AGTCCTATGTTCAGAGATAA+CGG 0.524266 2.1:+63804933 None:intergenic
CTCACCCTGCCCTTTCGCCA+TGG 0.527521 2.1:+63806293 None:intergenic
TTGACAGAACTTGACCCTGC+AGG 0.529299 2.1:+63804609 None:intergenic
CTTTATGCTAAGATCTCCCA+TGG 0.535543 2.1:+63805907 None:intergenic
CTTGCCATGGCGAAAGGGCA+GGG 0.537534 2.1:-63806297 MS.gene047299:CDS
AGAAGGGCCTTCATTTCTTG+AGG 0.537872 2.1:+63805355 None:intergenic
TCTGCTGGTACCAGACCTGC+AGG 0.542235 2.1:-63804624 MS.gene047299:CDS
AATTCATATTAGAAGTCAAA+CGG 0.543584 2.1:+63805740 None:intergenic
GGAATAGAAATGTATGGCAT+GGG 0.547477 2.1:-63806553 MS.gene047299:CDS
TGCATCTTCAGATAAACGGT+TGG 0.547701 2.1:+63804410 None:intergenic
CCTTCTTTGGTTGAAATCAG+TGG 0.553653 2.1:-63805338 MS.gene047299:CDS
TTAATGTCTCCAGACTCTGC+TGG 0.560448 2.1:-63804639 MS.gene047299:CDS
AATGTATGGCATGGGAAACT+GGG 0.562064 2.1:-63806545 MS.gene047299:CDS
TTATCCAAATCCATTTGAGA+AGG 0.565094 2.1:-63805046 MS.gene047299:CDS
CATGTGGTCCCGAACAATCA+CGG 0.569260 2.1:-63804675 MS.gene047299:CDS
TCATCAAATGTTCAAGAATG+TGG 0.572296 2.1:-63804333 MS.gene047299:CDS
GCAGCATGTGTGTTGACTGA+GGG 0.575476 2.1:+63805611 None:intergenic
CAATCATTCTTACAGGGTCA+TGG 0.577318 2.1:-63807259 MS.gene047299:intron
CATGGCGAAAGGGCAGGGTG+AGG 0.578638 2.1:-63806292 MS.gene047299:CDS
TCCAGTCTGGGCAAATGAGA+GGG 0.584062 2.1:+63806740 None:intergenic
AAGGCATCCAATAAAGGGCG+GGG 0.585408 2.1:-63805572 MS.gene047299:CDS
GTCATTGACAGATTCTCCAA+TGG 0.586027 2.1:-63805408 MS.gene047299:intron
AGAAAGAAGAATGCTGCAAG+TGG 0.586362 2.1:-63808405 MS.gene047299:CDS
CATACCGGAAGAGGGAAGAA+CGG 0.589060 2.1:+63806445 None:intergenic
TTCCAGTCTGGGCAAATGAG+AGG 0.590859 2.1:+63806739 None:intergenic
TATGATATGCTCATTAAGAA+GGG 0.593230 2.1:-63804287 MS.gene047299:CDS
AGGCATCCAATAAAGGGCGG+GGG 0.596003 2.1:-63805571 MS.gene047299:CDS
CCGAGGAAAAGTCAATATGC+CGG 0.597275 2.1:-63805014 MS.gene047299:CDS
GATTGTAACAGGACTTCCCA+TGG 0.597457 2.1:-63805924 MS.gene047299:intron
CACTGATTTCAACCAAAGAA+GGG 0.597471 2.1:+63805339 None:intergenic
CAGAAAAGAACTTCTTGCCA+TGG 0.598444 2.1:-63806310 MS.gene047299:CDS
CAATACATAAGTCAAAATCT+GGG 0.604695 2.1:+63807322 None:intergenic
GGGCAGGGTGAGGACAAGAA+AGG 0.604928 2.1:-63806282 MS.gene047299:intron
TCTGGCGCATAAGAGAAGAA+AGG 0.605068 2.1:-63804736 MS.gene047299:CDS
GCAGAAGTTGCTGAGCATGT+TGG 0.605076 2.1:-63806523 MS.gene047299:CDS
GAACCGTTATCTCTGAACAT+AGG 0.607443 2.1:-63804936 MS.gene047299:CDS
TGCAGCATGTGTGTTGACTG+AGG 0.608763 2.1:+63805610 None:intergenic
CCTGGAATTGTTAAAATGGA+AGG 0.609692 2.1:-63805539 MS.gene047299:intron
AATTCAATGGGTCGTTCTCG+TGG 0.613358 2.1:-63808622 None:intergenic
ATTAGAAGTCAAACGGCCAG+TGG 0.615296 2.1:+63805747 None:intergenic
AGCGAGAGAAAGTGCTCATG+TGG 0.619340 2.1:-63804691 MS.gene047299:CDS
TAAGTCAAAATCTGGGCACA+TGG 0.621677 2.1:+63807329 None:intergenic
AAGCCTGACATACCGGAAGA+GGG 0.625173 2.1:+63806437 None:intergenic
CAAAAGCAATCATTCTTACA+GGG 0.631809 2.1:-63807265 MS.gene047299:CDS
TGAGAAGGATTTAACACCCG+AGG 0.635433 2.1:-63805031 MS.gene047299:CDS
CGTTTATCTGAAGATGCAAG+AGG 0.641805 2.1:-63804405 MS.gene047299:CDS
AAAAGGCATCCAATAAAGGG+CGG 0.652819 2.1:-63805574 MS.gene047299:CDS
GTTTAAGGACACTGACACTG+AGG 0.653964 2.1:-63805243 MS.gene047299:CDS
ATTGTAACAGGACTTCCCAT+GGG 0.663000 2.1:-63805923 MS.gene047299:intron
TAAGGACACTGACACTGAGG+AGG 0.663510 2.1:-63805240 MS.gene047299:CDS
TGATGAAAGAAAGCGCAGGA+AGG 0.670308 2.1:-63805094 MS.gene047299:CDS
ACGATGATGATCCAAGCCAA+AGG 0.670643 2.1:-63808585 MS.gene047299:intron
TTTATGCTAAGATCTCCCAT+GGG 0.680782 2.1:+63805908 None:intergenic
GGCTTGATGAAAGAAAGCGC+AGG 0.689974 2.1:-63805098 MS.gene047299:CDS
CTGCTGGTACCAGACCTGCA+GGG 0.707483 2.1:-63804623 MS.gene047299:CDS
GGATACCATCAAAATTGACA+GGG 0.710009 2.1:-63804312 MS.gene047299:CDS
TATCTGCTTCAACTGAACTG+CGG 0.712712 2.1:+63804763 None:intergenic
TACCGGAAGAGGGAAGAACG+GGG 0.721077 2.1:+63806447 None:intergenic
TGTGGTCCCGAACAATCACG+GGG 0.753110 2.1:-63804673 MS.gene047299:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATAAATAATATTTAAAGA+TGG + chr2.1:63804767-63804786 None:intergenic 10.0%
!! TATATTGTTTATATATTGTA+GGG - chr2.1:63807241-63807260 MS.gene047299:intron 10.0%
!! ATTAAAGTTAAAGACTTATA+TGG + chr2.1:63804892-63804911 None:intergenic 15.0%
!! ATTGAAAGGAAATTATAATT+GGG + chr2.1:63807218-63807237 None:intergenic 15.0%
!! CTATATTGTTTATATATTGT+AGG - chr2.1:63807240-63807259 MS.gene047299:intron 15.0%
!! GAAAAATATAAACTTTAACT+TGG + chr2.1:63804745-63804764 None:intergenic 15.0%
!! TATCATATTCGTTTATATAA+AGG - chr2.1:63806496-63806515 MS.gene047299:CDS 15.0%
!! TATTATAATCTATGATTCTA+TGG - chr2.1:63806843-63806862 MS.gene047299:intron 15.0%
!!! ATATGATAAAGCATTATATT+TGG - chr2.1:63806250-63806269 MS.gene047299:intron 15.0%
!!! CTTTTCTTATTATTGTAATT+GGG - chr2.1:63804341-63804360 MS.gene047299:CDS 15.0%
!!! GATATTAAGAATTTTGTATT+CGG + chr2.1:63805232-63805251 None:intergenic 15.0%
!!! TCTATATCAGTTTTTTAATA+CGG - chr2.1:63806096-63806115 MS.gene047299:intron 15.0%
!!! TCTTTTCTTATTATTGTAAT+TGG - chr2.1:63804340-63804359 MS.gene047299:CDS 15.0%
!! AATTCATATTAGAAGTCAAA+CGG + chr2.1:63807150-63807169 None:intergenic 20.0%
!! ACATTCTTCTTTATAAATAC+TGG - chr2.1:63806932-63806951 MS.gene047299:intron 20.0%
!! AGGCATTATTATTTATTGTT+TGG + chr2.1:63806776-63806795 None:intergenic 20.0%
!! ATAACTGCTAAAATATGTTT+CGG - chr2.1:63806810-63806829 MS.gene047299:intron 20.0%
!! ATGAATAAAAATCAAACCTT+TGG + chr2.1:63804321-63804340 None:intergenic 20.0%
!! GATTGAAAGGAAATTATAAT+TGG + chr2.1:63807219-63807238 None:intergenic 20.0%
!! TAAACAATATAGAGATTGAA+AGG + chr2.1:63807232-63807251 None:intergenic 20.0%
!! TACTGTAATAAAGATATTAC+AGG - chr2.1:63805515-63805534 MS.gene047299:intron 20.0%
!! TAGATGACAATGTAATTTAA+GGG + chr2.1:63805209-63805228 None:intergenic 20.0%
!! TATCTATAAGAGAAACTATT+TGG - chr2.1:63805942-63805961 MS.gene047299:intron 20.0%
!! TATGTTTAATAAGACATCAA+AGG + chr2.1:63805681-63805700 None:intergenic 20.0%
!!! AATATAAACTTTAACTTGGA+TGG + chr2.1:63804741-63804760 None:intergenic 20.0%
!!! ACGTTTTTCAATTTAAAGAT+AGG + chr2.1:63807765-63807784 None:intergenic 20.0%
!!! ATGTTTGATAATAATTTTCC+TGG - chr2.1:63805433-63805452 MS.gene047299:intron 20.0%
! AATGTAATTTAAGGGATGTT+TGG + chr2.1:63805201-63805220 None:intergenic 25.0%
! AGGAAAACATTTGAAAGTAA+TGG + chr2.1:63805661-63805680 None:intergenic 25.0%
! ATACAATTAACCAAGTACAA+TGG + chr2.1:63804556-63804575 None:intergenic 25.0%
! ATAGCATACTGTTATAAATC+AGG - chr2.1:63806697-63806716 MS.gene047299:intron 25.0%
! CAACAAATACCAAACTAAAA+TGG + chr2.1:63807724-63807743 None:intergenic 25.0%
! CAATACATAAGTCAAAATCT+GGG + chr2.1:63805568-63805587 None:intergenic 25.0%
! CATCAACTTATTCAGTTATA+CGG + chr2.1:63805258-63805277 None:intergenic 25.0%
! GAATGTCGATAAGAATTTAA+TGG + chr2.1:63808020-63808039 None:intergenic 25.0%
! GTAGATGACAATGTAATTTA+AGG + chr2.1:63805210-63805229 None:intergenic 25.0%
! GTTCTATCATAAACCATATT+TGG + chr2.1:63805995-63806014 None:intergenic 25.0%
! TATGATATGCTCATTAAGAA+GGG - chr2.1:63808600-63808619 MS.gene047299:CDS 25.0%
! TCAATACATAAGTCAAAATC+TGG + chr2.1:63805569-63805588 None:intergenic 25.0%
! TGGTTTATGATAGAACATTA+TGG - chr2.1:63805999-63806018 MS.gene047299:intron 25.0%
! TTCCAAGTAGAGAAAAAAAA+AGG + chr2.1:63808042-63808061 None:intergenic 25.0%
! TTGACTTCTAATATGAATTC+AGG - chr2.1:63807151-63807170 MS.gene047299:intron 25.0%
! TTGGTTTAAATTAATTGCCT+AGG - chr2.1:63806203-63806222 MS.gene047299:intron 25.0%
! TTTAAATTGAAAAACGTTGC+AGG - chr2.1:63807768-63807787 MS.gene047299:intron 25.0%
! TTTCATTCTTTAGCGAAAAA+TGG + chr2.1:63805335-63805354 None:intergenic 25.0%
!! TAATGCAATTTTCATAACAG+CGG + chr2.1:63805878-63805897 None:intergenic 25.0%
!!! AGCAACAAATTTTTGGTTTT+AGG - chr2.1:63806312-63806331 MS.gene047299:CDS 25.0%
!!! ATTAGTTTCTGTAGTTTTTG+GGG - chr2.1:63806655-63806674 MS.gene047299:intron 25.0%
!!! ATTTTGTTTTCTGAAACCAT+CGG - chr2.1:63808405-63808424 MS.gene047299:CDS 25.0%
!!! CATTAGTTTCTGTAGTTTTT+GGG - chr2.1:63806654-63806673 MS.gene047299:intron 25.0%
!!! CTTTTCTAGCAACAAATTTT+TGG - chr2.1:63806305-63806324 MS.gene047299:CDS 25.0%
!!! GCAACAAATTTTTGGTTTTA+GGG - chr2.1:63806313-63806332 MS.gene047299:CDS 25.0%
!!! TCATTAGTTTCTGTAGTTTT+TGG - chr2.1:63806653-63806672 MS.gene047299:intron 25.0%
!!! TTCCTTTTTTTTTCTCTACT+TGG - chr2.1:63808037-63808056 MS.gene047299:intron 25.0%
!!! TTCTAAATGTTGATTCAGAA+TGG - chr2.1:63807096-63807115 MS.gene047299:intron 25.0%
!!! TTTTAGGGAATAGAAATGTA+TGG - chr2.1:63806328-63806347 MS.gene047299:CDS 25.0%
AACTATTTGGAAAGATTTCG+AGG - chr2.1:63805955-63805974 MS.gene047299:intron 30.0%
ACAAAAGCAATCATTCTTAC+AGG - chr2.1:63805621-63805640 MS.gene047299:CDS 30.0%
AGCAATGATAACAACAATGT+CGG + chr2.1:63805913-63805932 None:intergenic 30.0%
AGCATTGTGTAATGTCAATT+GGG + chr2.1:63807400-63807419 None:intergenic 30.0%
AGTTATCAGCAACATAAATG+AGG + chr2.1:63806796-63806815 None:intergenic 30.0%
ATAGATACAGTAAAATGCTG+TGG - chr2.1:63804415-63804434 MS.gene047299:CDS 30.0%
ATCACTCTGAGTTTAATTAC+AGG - chr2.1:63805756-63805775 MS.gene047299:CDS 30.0%
ATGCTTTCAACTATATGTGT+AGG - chr2.1:63804453-63804472 MS.gene047299:intron 30.0%
CAAAAGCAATCATTCTTACA+GGG - chr2.1:63805622-63805641 MS.gene047299:CDS 30.0%
CATGTCCTAGTAAATAAGAA+TGG + chr2.1:63806537-63806556 None:intergenic 30.0%
CATTTAGAAGTCAATCAACA+TGG + chr2.1:63807085-63807104 None:intergenic 30.0%
GAAAAGAATTCAAGAGCTTA+AGG - chr2.1:63807979-63807998 MS.gene047299:intron 30.0%
GATTTCTAAGCTACAAATTG+TGG + chr2.1:63804958-63804977 None:intergenic 30.0%
GTATGATATGCTCATTAAGA+AGG - chr2.1:63808599-63808618 MS.gene047299:CDS 30.0%
TAAAAATCAAACCTTTGGCT+TGG + chr2.1:63804316-63804335 None:intergenic 30.0%
TAACCTTTCGATTGATCAAA+AGG + chr2.1:63805705-63805724 None:intergenic 30.0%
TCAGCATCATTATCATATTC+AGG + chr2.1:63807603-63807622 None:intergenic 30.0%
TCATCAAATGTTCAAGAATG+TGG - chr2.1:63808554-63808573 MS.gene047299:intron 30.0%
TTATCCAAATCCATTTGAGA+AGG - chr2.1:63807841-63807860 MS.gene047299:intron 30.0%
! AAATCCTTCTCAAATGGATT+TGG + chr2.1:63807848-63807867 None:intergenic 30.0%
! AATCAACATGGTATTGAACA+TGG + chr2.1:63807073-63807092 None:intergenic 30.0%
! GTCTCATTTATCACTTCTTT+TGG - chr2.1:63806723-63806742 MS.gene047299:CDS 30.0%
! TAACCTTTTGATCAATCGAA+AGG - chr2.1:63805699-63805718 MS.gene047299:intron 30.0%
! TGATGAAATTTTGCTTCTAG+AGG - chr2.1:63806177-63806196 MS.gene047299:intron 30.0%
!! GAAGGTGTGCATTTTATATT+TGG - chr2.1:63807366-63807385 MS.gene047299:CDS 30.0%
!! GTAAGAATGATTGCTTTTGT+GGG + chr2.1:63805621-63805640 None:intergenic 30.0%
!! TAAGAATGATTGCTTTTGTG+GGG + chr2.1:63805620-63805639 None:intergenic 30.0%
!! TGTAAGAATGATTGCTTTTG+TGG + chr2.1:63805622-63805641 None:intergenic 30.0%
!!! ACAGTTTTAGAATGCAAACT+TGG + chr2.1:63808373-63808392 None:intergenic 30.0%
!!! GGTAAACAACCATTTTAGTT+TGG - chr2.1:63807712-63807731 MS.gene047299:intron 30.0%
!!! TGATTGGTTGGTTTTTGTTT+TGG - chr2.1:63806881-63806900 MS.gene047299:intron 30.0%
AAGCATGCATAGAACACTAT+AGG - chr2.1:63806401-63806420 MS.gene047299:intron 35.0%
AATTAATTGCCTAGGAGTAG+CGG - chr2.1:63806211-63806230 MS.gene047299:intron 35.0%
ACACAAATCGATGAATGCAA+AGG + chr2.1:63804817-63804836 None:intergenic 35.0%
AGAAACTGTAACCGTATGTT+TGG - chr2.1:63805148-63805167 MS.gene047299:intron 35.0%
AGTCCTATGTTCAGAGATAA+CGG + chr2.1:63807957-63807976 None:intergenic 35.0%
AGTGGAGATAATTCAGAATC+TGG - chr2.1:63804500-63804519 MS.gene047299:intron 35.0%
AGTGTCCTTAAACTCCATTT+CGG + chr2.1:63807637-63807656 None:intergenic 35.0%
AGTTGAAGCAGATAGATATC+TGG - chr2.1:63808133-63808152 MS.gene047299:intron 35.0%
ATATTGTAGGGTCAGATTCT+GGG - chr2.1:63807253-63807272 MS.gene047299:intron 35.0%
ATCGAAGTGTAGGTTTGAAA+CGG - chr2.1:63805171-63805190 MS.gene047299:intron 35.0%
ATGCTCATTAAGAAGGGAAT+TGG - chr2.1:63808606-63808625 MS.gene047299:CDS 35.0%
ATGGAAGATTCCAACAAATC+TGG - chr2.1:63807115-63807134 MS.gene047299:intron 35.0%
CAGCAATCATTTGTACAGAT+AGG + chr2.1:63808509-63808528 None:intergenic 35.0%
CAGCATTGTGTAATGTCAAT+TGG + chr2.1:63807401-63807420 None:intergenic 35.0%
CCAAATTCCTCAAGAAATGA+AGG - chr2.1:63807525-63807544 MS.gene047299:intron 35.0%
CCTGGAATTGTTAAAATGGA+AGG - chr2.1:63807348-63807367 MS.gene047299:CDS 35.0%
CCTTCATTTCTTGAGGAATT+TGG + chr2.1:63807528-63807547 None:intergenic 35.0%
CTATCATGTACCATTGTACT+TGG - chr2.1:63804543-63804562 MS.gene047299:intron 35.0%
CTATCTGTACAAATGATTGC+TGG - chr2.1:63808507-63808526 MS.gene047299:intron 35.0%
CTCTTGCATCTTCAGATAAA+CGG + chr2.1:63808484-63808503 None:intergenic 35.0%
CTGTCAATGACAAAAGAACT+AGG + chr2.1:63807470-63807489 None:intergenic 35.0%
GACAAATTATCCTGACAACA+AGG + chr2.1:63806124-63806143 None:intergenic 35.0%
GCATGAACATGTCATATTTC+CGG + chr2.1:63807895-63807914 None:intergenic 35.0%
GGAATAGAAATGTATGGCAT+GGG - chr2.1:63806334-63806353 MS.gene047299:CDS 35.0%
GGATACCATCAAAATTGACA+GGG - chr2.1:63808575-63808594 MS.gene047299:intron 35.0%
GGTGTTAAATCCTTCTCAAA+TGG + chr2.1:63807854-63807873 None:intergenic 35.0%
GTCAAGTTCTGTCAATGAAA+TGG - chr2.1:63808286-63808305 MS.gene047299:intron 35.0%
GTTGATGTTGACAGTTGTAA+TGG - chr2.1:63805271-63805290 MS.gene047299:CDS 35.0%
TACACTTCGATCCAAACATA+CGG + chr2.1:63805162-63805181 None:intergenic 35.0%
TATATTGTAGGGTCAGATTC+TGG - chr2.1:63807252-63807271 MS.gene047299:intron 35.0%
TATTCAAACAAACACTCCAC+AGG + chr2.1:63805301-63805320 None:intergenic 35.0%
TCAACTATATGTGTAGGTCA+AGG - chr2.1:63804459-63804478 MS.gene047299:intron 35.0%
TCTGGAGACATTAATGCATT+TGG + chr2.1:63808242-63808261 None:intergenic 35.0%
TGCTGCGCATTTATTCAAAA+AGG - chr2.1:63807691-63807710 MS.gene047299:intron 35.0%
TGGATACCATCAAAATTGAC+AGG - chr2.1:63808574-63808593 MS.gene047299:intron 35.0%
TGGTCCTGGAATTGTTAAAA+TGG - chr2.1:63807344-63807363 MS.gene047299:CDS 35.0%
TGGTTACTTGTGATTGTAAC+AGG - chr2.1:63806952-63806971 MS.gene047299:intron 35.0%
TTGACTCTAGATGGAGAAAA+GGG + chr2.1:63807015-63807034 None:intergenic 35.0%
TTTATGCTAAGATCTCCCAT+GGG + chr2.1:63806982-63807001 None:intergenic 35.0%
! ATACACCCTGTCAATTTTGA+TGG + chr2.1:63808583-63808602 None:intergenic 35.0%
! CAATTTTCATAACAGCGGTT+TGG + chr2.1:63805873-63805892 None:intergenic 35.0%
! GCTGACCATTCTTATTTACT+AGG - chr2.1:63806529-63806548 MS.gene047299:CDS 35.0%
! GTATTGAGTGCTTTTCTGTT+GGG - chr2.1:63805582-63805601 MS.gene047299:CDS 35.0%
! TAACGAGTTGGATCCAAATA+TGG - chr2.1:63805979-63805998 MS.gene047299:intron 35.0%
! TATTGAGTGCTTTTCTGTTG+GGG - chr2.1:63805583-63805602 MS.gene047299:CDS 35.0%
! TGTATTGAGTGCTTTTCTGT+TGG - chr2.1:63805581-63805600 MS.gene047299:CDS 35.0%
!! AACCAAAAGGCATCCAATAA+AGG - chr2.1:63807309-63807328 MS.gene047299:CDS 35.0%
!! ACCAAAAGGCATCCAATAAA+GGG - chr2.1:63807310-63807329 MS.gene047299:CDS 35.0%
!! CACTGATTTCAACCAAAGAA+GGG + chr2.1:63807551-63807570 None:intergenic 35.0%
!! CCTTCCATTTTAACAATTCC+AGG + chr2.1:63807351-63807370 None:intergenic 35.0%
!!! ATTTTGCTTCTAGAGGTACT+TGG - chr2.1:63806184-63806203 MS.gene047299:intron 35.0%
AAATGTATGGCATGGGAAAC+TGG - chr2.1:63806341-63806360 MS.gene047299:intron 40.0%
AAGAAATGAAGGCCCTTCTT+TGG - chr2.1:63807536-63807555 MS.gene047299:intron 40.0%
AATGTATGGCATGGGAAACT+GGG - chr2.1:63806342-63806361 MS.gene047299:intron 40.0%
AATTGTGGACAATTCCAACG+TGG + chr2.1:63804943-63804962 None:intergenic 40.0%
AGAAAGAAGAATGCTGCAAG+TGG - chr2.1:63804482-63804501 MS.gene047299:intron 40.0%
AGATTTCGAGGTTAACGAGT+TGG - chr2.1:63805967-63805986 MS.gene047299:intron 40.0%
AGCTTCGAAATTATCACCGT+GGG - chr2.1:63805110-63805129 MS.gene047299:intron 40.0%
AGGACATGTCTCATGTTGTT+GGG - chr2.1:63806549-63806568 MS.gene047299:CDS 40.0%
ATCTTCAGATAAACGGTTGG+AGG + chr2.1:63808477-63808496 None:intergenic 40.0%
ATGGATGCAACTGGATACTA+TGG - chr2.1:63808305-63808324 MS.gene047299:intron 40.0%
ATGTTGACAGTTGTAATGGC+AGG - chr2.1:63805275-63805294 MS.gene047299:CDS 40.0%
ATTGTAACAGGACTTCCCAT+GGG - chr2.1:63806964-63806983 MS.gene047299:intron 40.0%
CAAATCGATGAATGCAAAGG+TGG + chr2.1:63804814-63804833 None:intergenic 40.0%
CAATCATTCTTACAGGGTCA+TGG - chr2.1:63805628-63805647 MS.gene047299:CDS 40.0%
CAGAAAAGAACTTCTTGCCA+TGG - chr2.1:63806577-63806596 MS.gene047299:intron 40.0%
CATGGGAGATCTTAGCATAA+AGG - chr2.1:63806981-63807000 MS.gene047299:intron 40.0%
CCTTCTTTGGTTGAAATCAG+TGG - chr2.1:63807549-63807568 MS.gene047299:intron 40.0%
CGTTTATCTGAAGATGCAAG+AGG - chr2.1:63808482-63808501 MS.gene047299:intron 40.0%
CTTCATGTGTACATGTTCAG+TGG - chr2.1:63805040-63805059 MS.gene047299:CDS 40.0%
CTTGACTCTAGATGGAGAAA+AGG + chr2.1:63807016-63807035 None:intergenic 40.0%
CTTTATGCTAAGATCTCCCA+TGG + chr2.1:63806983-63807002 None:intergenic 40.0%
GAACCGTTATCTCTGAACAT+AGG - chr2.1:63807951-63807970 MS.gene047299:intron 40.0%
GGGAATAGAAATGTATGGCA+TGG - chr2.1:63806333-63806352 MS.gene047299:CDS 40.0%
GTATGTTTGGATCGAAGTGT+AGG - chr2.1:63805161-63805180 MS.gene047299:intron 40.0%
GTCAATGAAATGGATGCAAC+TGG - chr2.1:63808296-63808315 MS.gene047299:intron 40.0%
GTCATTGACAGATTCTCCAA+TGG - chr2.1:63807479-63807498 MS.gene047299:intron 40.0%
GTTCATGCGCTTTCATACTA+AGG - chr2.1:63807907-63807926 MS.gene047299:intron 40.0%
TAAGTCAAAATCTGGGCACA+TGG + chr2.1:63805561-63805580 None:intergenic 40.0%
TAATTATCCTGCTAGACTGC+AGG - chr2.1:63805730-63805749 MS.gene047299:intron 40.0%
TAGCTTAGAAATCATCACCG+TGG - chr2.1:63804965-63804984 MS.gene047299:CDS 40.0%
TAGCTTCGAAATTATCACCG+TGG - chr2.1:63805109-63805128 MS.gene047299:intron 40.0%
TAGGACATGTCTCATGTTGT+TGG - chr2.1:63806548-63806567 MS.gene047299:CDS 40.0%
TATCTGCTTCAACTGAACTG+CGG + chr2.1:63808127-63808146 None:intergenic 40.0%
TATTTCGAATGCGAAACACG+TGG - chr2.1:63804699-63804718 MS.gene047299:CDS 40.0%
TCATTCAAAGCCTGACATAC+CGG + chr2.1:63806460-63806479 None:intergenic 40.0%
TGCATCTTCAGATAAACGGT+TGG + chr2.1:63808480-63808499 None:intergenic 40.0%
TGGTTATAACGCGAAAAGAC+AGG - chr2.1:63807569-63807588 MS.gene047299:intron 40.0%
TGTACTGTGTAACTGCACTA+TGG - chr2.1:63804591-63804610 MS.gene047299:CDS 40.0%
TTAAATTCACCGCTACTCCT+AGG + chr2.1:63806223-63806242 None:intergenic 40.0%
! AATTCAGAATCTGGAGTTGC+AGG - chr2.1:63804509-63804528 MS.gene047299:intron 40.0%
! AGAGCTTAAGGTTTGAGACA+TGG - chr2.1:63807991-63808010 MS.gene047299:intron 40.0%
! CATTTGTTGAACATGATCGC+AGG - chr2.1:63808082-63808101 MS.gene047299:intron 40.0%
! GCTTCTGATTTTTCGCTGAT+TGG - chr2.1:63806865-63806884 MS.gene047299:intron 40.0%
! TAATACGGTTCCTTGTTGTC+AGG - chr2.1:63806111-63806130 MS.gene047299:intron 40.0%
! TCTCCAATGGACAGAGATTT+TGG - chr2.1:63807492-63807511 MS.gene047299:intron 40.0%
! TCTCCATCTAGAGTCAAGTA+AGG - chr2.1:63807018-63807037 MS.gene047299:intron 40.0%
!! AAAAGGCATCCAATAAAGGG+CGG - chr2.1:63807313-63807332 MS.gene047299:CDS 40.0%
!! CCACTGATTTCAACCAAAGA+AGG + chr2.1:63807552-63807571 None:intergenic 40.0%
!! CTGATTTTTCGCTGATTGGT+TGG - chr2.1:63806869-63806888 MS.gene047299:intron 40.0%
!!! GTTTTTTGTGAGTCAGGTCA+AGG - chr2.1:63805455-63805474 MS.gene047299:intron 40.0%
!!! TTCCTGGTTTTTTGTGAGTC+AGG - chr2.1:63805449-63805468 MS.gene047299:intron 40.0%
AACAATGTCGGCGAAACTAG+TGG + chr2.1:63805901-63805920 None:intergenic 45.0%
AACGTTTGTGCTGCGAGTTA+AGG - chr2.1:63808448-63808467 MS.gene047299:intron 45.0%
AACTTCTTGCCATGGCGAAA+GGG - chr2.1:63806585-63806604 MS.gene047299:intron 45.0%
ACGATGATGATCCAAGCCAA+AGG - chr2.1:63804302-63804321 MS.gene047299:CDS 45.0%
ACTAAGCGGAGTTAGCTACA+TGG + chr2.1:63806036-63806055 None:intergenic 45.0%
ACTCGCCGAAATGGAGTTTA+AGG - chr2.1:63807629-63807648 MS.gene047299:intron 45.0%
AGAAGGGCCTTCATTTCTTG+AGG + chr2.1:63807535-63807554 None:intergenic 45.0%
ATGTAGCTAACTCCGCTTAG+TGG - chr2.1:63806035-63806054 MS.gene047299:intron 45.0%
ATTAGAAGTCAAACGGCCAG+TGG + chr2.1:63807143-63807162 None:intergenic 45.0%
CAGCCTTACTTGACTCTAGA+TGG + chr2.1:63807024-63807043 None:intergenic 45.0%
CATCATCTGCATTCCAGTCT+GGG + chr2.1:63806162-63806181 None:intergenic 45.0%
CCGAGGAAAAGTCAATATGC+CGG - chr2.1:63807873-63807892 MS.gene047299:intron 45.0%
CCTCCAAAATCTCTGTCCAT+TGG + chr2.1:63807498-63807517 None:intergenic 45.0%
GACCTGACTCACAAAAAACC+AGG + chr2.1:63805454-63805473 None:intergenic 45.0%
GATTGTAACAGGACTTCCCA+TGG - chr2.1:63806963-63806982 MS.gene047299:intron 45.0%
GTTTAAGGACACTGACACTG+AGG - chr2.1:63807644-63807663 MS.gene047299:intron 45.0%
TAACTCCGCTTAGTGGGATA+AGG - chr2.1:63806042-63806061 MS.gene047299:intron 45.0%
TCATCATCTGCATTCCAGTC+TGG + chr2.1:63806163-63806182 None:intergenic 45.0%
TCCAACGTGGAAACAAACAC+AGG + chr2.1:63804930-63804949 None:intergenic 45.0%
TCTGGCGCATAAGAGAAGAA+AGG - chr2.1:63808151-63808170 MS.gene047299:intron 45.0%
TGAGAAGGATTTAACACCCG+AGG - chr2.1:63807856-63807875 MS.gene047299:intron 45.0%
TGAGCAATTACTCGCCGAAA+TGG - chr2.1:63807620-63807639 MS.gene047299:intron 45.0%
TGCAGCTAGTGCTAACCAAA+AGG - chr2.1:63807296-63807315 MS.gene047299:CDS 45.0%
TGGATGGAAATCACCGTGTT+CGG + chr2.1:63804725-63804744 None:intergenic 45.0%
TGTAGCTAACTCCGCTTAGT+GGG - chr2.1:63806036-63806055 MS.gene047299:intron 45.0%
! ATTATCACCGTGGGAAGTGT+CGG - chr2.1:63805119-63805138 MS.gene047299:intron 45.0%
! CCAATGGACAGAGATTTTGG+AGG - chr2.1:63807495-63807514 MS.gene047299:intron 45.0%
! GCAACAATTTTCTCGCATCC+TGG + chr2.1:63804999-63805018 None:intergenic 45.0%
! GCCCTTTATTGGATGCCTTT+TGG + chr2.1:63807314-63807333 None:intergenic 45.0%
! GTACACATGAAGTGCTTGTC+TGG + chr2.1:63805032-63805051 None:intergenic 45.0%
! TCCAACAAATCTGGTTCCAC+TGG - chr2.1:63807124-63807143 MS.gene047299:intron 45.0%
! TGATGAAAGAAAGCGCAGGA+AGG - chr2.1:63807793-63807812 MS.gene047299:intron 45.0%
! TTTGGAACCCCGTGATTGTT+CGG + chr2.1:63808224-63808243 None:intergenic 45.0%
!! AAAGGCATCCAATAAAGGGC+GGG - chr2.1:63807314-63807333 MS.gene047299:CDS 45.0%
!! TGTGTTGCTTGCTCTTCGTA+AGG - chr2.1:63804832-63804851 MS.gene047299:intron 45.0%
!!! CCGGCATATTGACTTTTCCT+CGG + chr2.1:63807876-63807895 None:intergenic 45.0%
!!! CGGCATATTGACTTTTCCTC+GGG + chr2.1:63807875-63807894 None:intergenic 45.0%
!!! CATTTTTATTTTATAAATAT+TGG - chr2.1:63806907-63806926 MS.gene047299:intron 5.0%
AAAGCCTGACATACCGGAAG+AGG + chr2.1:63806454-63806473 None:intergenic 50.0%
AAGCCTGACATACCGGAAGA+GGG + chr2.1:63806453-63806472 None:intergenic 50.0%
AAGGAGCAGGTGAAGCGAAA+AGG - chr2.1:63805474-63805493 MS.gene047299:intron 50.0%
AGGAGCAGGTGAAGCGAAAA+GGG - chr2.1:63805475-63805494 MS.gene047299:intron 50.0%
ATACCGGAAGAGGGAAGAAC+GGG + chr2.1:63806444-63806463 None:intergenic 50.0%
ATGTGGTCCCGAACAATCAC+GGG - chr2.1:63808213-63808232 MS.gene047299:intron 50.0%
CAAAGGTGGCGACATGCAAT+TGG + chr2.1:63804800-63804819 None:intergenic 50.0%
CATACCGGAAGAGGGAAGAA+CGG + chr2.1:63806445-63806464 None:intergenic 50.0%
CATGTGGTCCCGAACAATCA+CGG - chr2.1:63808212-63808231 MS.gene047299:intron 50.0%
CTGGCAGAATTTACAGCCGA+TGG + chr2.1:63808424-63808443 None:intergenic 50.0%
GAACTTCTTGCCATGGCGAA+AGG - chr2.1:63806584-63806603 MS.gene047299:intron 50.0%
GCAGAAGTTGCTGAGCATGT+TGG - chr2.1:63806364-63806383 MS.gene047299:intron 50.0%
GCCAGTGGAACCAGATTTGT+TGG + chr2.1:63807128-63807147 None:intergenic 50.0%
GCCTGTGTTTGTTTCCACGT+TGG - chr2.1:63804926-63804945 MS.gene047299:CDS 50.0%
GGCACATGGCACACTTGATA+CGG + chr2.1:63805547-63805566 None:intergenic 50.0%
TAAGGACACTGACACTGAGG+AGG - chr2.1:63807647-63807666 MS.gene047299:intron 50.0%
TCCAGTCTGGGCAAATGAGA+GGG + chr2.1:63806150-63806169 None:intergenic 50.0%
TGATCAACCTGCAGTCTAGC+AGG + chr2.1:63805740-63805759 None:intergenic 50.0%
TTCCAGTCTGGGCAAATGAG+AGG + chr2.1:63806151-63806170 None:intergenic 50.0%
TTGACAGAACTTGACCCTGC+AGG + chr2.1:63808281-63808300 None:intergenic 50.0%
TTGGAACCCCGTGATTGTTC+GGG + chr2.1:63808223-63808242 None:intergenic 50.0%
! AAGGCATCCAATAAAGGGCG+GGG - chr2.1:63807315-63807334 MS.gene047299:CDS 50.0%
! CATCGGCTGTAAATTCTGCC+AGG - chr2.1:63808422-63808441 MS.gene047299:intron 50.0%
! CCAAGCCTTATCCCACTAAG+CGG + chr2.1:63806050-63806069 None:intergenic 50.0%
! GGCTTGATGAAAGAAAGCGC+AGG - chr2.1:63807789-63807808 MS.gene047299:intron 50.0%
!! AGCGAGAGAAAGTGCTCATG+TGG - chr2.1:63808196-63808215 MS.gene047299:intron 50.0%
!! GCAGCATGTGTGTTGACTGA+GGG + chr2.1:63807279-63807298 None:intergenic 50.0%
!! TGCAGCATGTGTGTTGACTG+AGG + chr2.1:63807280-63807299 None:intergenic 50.0%
!! TTATCACCGTGGGAAGTGTC+GGG - chr2.1:63805120-63805139 MS.gene047299:intron 50.0%
AATAAAGGGCGGGGGAAAGG+TGG - chr2.1:63807324-63807343 MS.gene047299:CDS 55.0%
ACCTTTCCCCCGCCCTTTAT+TGG + chr2.1:63807325-63807344 None:intergenic 55.0%
AGAACTTGACCCTGCAGGTC+TGG + chr2.1:63808276-63808295 None:intergenic 55.0%
AGGCATCCAATAAAGGGCGG+GGG - chr2.1:63807316-63807335 MS.gene047299:CDS 55.0%
ATCACCGTGGAATGTGTGCC+AGG - chr2.1:63804978-63804997 MS.gene047299:CDS 55.0%
CAGTTGTAATGGCAGGCCTG+TGG - chr2.1:63805282-63805301 MS.gene047299:CDS 55.0%
CCGCTTAGTGGGATAAGGCT+TGG - chr2.1:63806047-63806066 MS.gene047299:intron 55.0%
CGCAGCACAAACGTTTCTCC+TGG + chr2.1:63808443-63808462 None:intergenic 55.0%
CTTCCCTCTTCCGGTATGTC+AGG - chr2.1:63806447-63806466 MS.gene047299:intron 55.0%
GCATCCTGGCACACATTCCA+CGG + chr2.1:63804985-63805004 None:intergenic 55.0%
TACCGGAAGAGGGAAGAACG+GGG + chr2.1:63806443-63806462 None:intergenic 55.0%
TCCAATAAAGGGCGGGGGAA+AGG - chr2.1:63807321-63807340 MS.gene047299:CDS 55.0%
TCCCTCTCATTTGCCCAGAC+TGG - chr2.1:63806146-63806165 MS.gene047299:intron 55.0%
TGTGAGTCAGGTCAAGGAGC+AGG - chr2.1:63805461-63805480 MS.gene047299:intron 55.0%
TGTGGTCCCGAACAATCACG+GGG - chr2.1:63808214-63808233 MS.gene047299:intron 55.0%
! GTGCTTTTCTGTTGGGGCTG+AGG - chr2.1:63805589-63805608 MS.gene047299:CDS 55.0%
CTCCCCGTTCTTCCCTCTTC+CGG - chr2.1:63806438-63806457 MS.gene047299:intron 60.0%
CTTGCCATGGCGAAAGGGCA+GGG - chr2.1:63806590-63806609 MS.gene047299:intron 60.0%
GCGAAACACGTGGCCGAACA+CGG - chr2.1:63804709-63804728 MS.gene047299:CDS 60.0%
GGGCAGGGTGAGGACAAGAA+AGG - chr2.1:63806605-63806624 MS.gene047299:intron 60.0%
TCGCATCCCGACACTTCCCA+CGG + chr2.1:63805129-63805148 None:intergenic 60.0%
TCTTGCCATGGCGAAAGGGC+AGG - chr2.1:63806589-63806608 MS.gene047299:intron 60.0%
CATGGCGAAAGGGCAGGGTG+AGG - chr2.1:63806595-63806614 MS.gene047299:intron 65.0%
CTCACCCTGCCCTTTCGCCA+TGG + chr2.1:63806597-63806616 None:intergenic 65.0%
TCGCAGGAAGCTCGTGCTGC+TGG - chr2.1:63808098-63808117 MS.gene047299:intron 65.0%
GGGCGGGGGAAAGGTGGTCC+TGG - chr2.1:63807330-63807349 MS.gene047299:CDS 75.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 63804271 63808638 63804271 ID=MS.gene047299
chr2.1 mRNA 63804271 63808638 63804271 ID=MS.gene047299.t1;Parent=MS.gene047299
chr2.1 exon 63808586 63808638 63808586 ID=MS.gene047299.t1.exon1;Parent=MS.gene047299.t1
chr2.1 CDS 63808586 63808638 63808586 ID=cds.MS.gene047299.t1;Parent=MS.gene047299.t1
chr2.1 exon 63808379 63808434 63808379 ID=MS.gene047299.t1.exon2;Parent=MS.gene047299.t1
chr2.1 CDS 63808379 63808434 63808379 ID=cds.MS.gene047299.t1;Parent=MS.gene047299.t1
chr2.1 exon 63807260 63807438 63807260 ID=MS.gene047299.t1.exon3;Parent=MS.gene047299.t1
chr2.1 CDS 63807260 63807438 63807260 ID=cds.MS.gene047299.t1;Parent=MS.gene047299.t1
chr2.1 exon 63806711 63806776 63806711 ID=MS.gene047299.t1.exon4;Parent=MS.gene047299.t1
chr2.1 CDS 63806711 63806776 63806711 ID=cds.MS.gene047299.t1;Parent=MS.gene047299.t1
chr2.1 exon 63806450 63806575 63806450 ID=MS.gene047299.t1.exon5;Parent=MS.gene047299.t1
chr2.1 CDS 63806450 63806575 63806450 ID=cds.MS.gene047299.t1;Parent=MS.gene047299.t1
chr2.1 exon 63806283 63806358 63806283 ID=MS.gene047299.t1.exon6;Parent=MS.gene047299.t1
chr2.1 CDS 63806283 63806358 63806283 ID=cds.MS.gene047299.t1;Parent=MS.gene047299.t1
chr2.1 exon 63805875 63805935 63805875 ID=MS.gene047299.t1.exon7;Parent=MS.gene047299.t1
chr2.1 CDS 63805875 63805935 63805875 ID=cds.MS.gene047299.t1;Parent=MS.gene047299.t1
chr2.1 exon 63805737 63805795 63805737 ID=MS.gene047299.t1.exon8;Parent=MS.gene047299.t1
chr2.1 CDS 63805737 63805795 63805737 ID=cds.MS.gene047299.t1;Parent=MS.gene047299.t1
chr2.1 exon 63805540 63805647 63805540 ID=MS.gene047299.t1.exon9;Parent=MS.gene047299.t1
chr2.1 CDS 63805540 63805647 63805540 ID=cds.MS.gene047299.t1;Parent=MS.gene047299.t1
chr2.1 exon 63805197 63805419 63805197 ID=MS.gene047299.t1.exon10;Parent=MS.gene047299.t1
chr2.1 CDS 63805197 63805419 63805197 ID=cds.MS.gene047299.t1;Parent=MS.gene047299.t1
chr2.1 exon 63804909 63805119 63804909 ID=MS.gene047299.t1.exon11;Parent=MS.gene047299.t1
chr2.1 CDS 63804909 63805119 63804909 ID=cds.MS.gene047299.t1;Parent=MS.gene047299.t1
chr2.1 exon 63804560 63804805 63804560 ID=MS.gene047299.t1.exon12;Parent=MS.gene047299.t1
chr2.1 CDS 63804560 63804805 63804560 ID=cds.MS.gene047299.t1;Parent=MS.gene047299.t1
chr2.1 exon 63804271 63804465 63804271 ID=MS.gene047299.t1.exon13;Parent=MS.gene047299.t1
chr2.1 CDS 63804271 63804465 63804271 ID=cds.MS.gene047299.t1;Parent=MS.gene047299.t1
Gene Sequence

>MS.gene047299

ATGGGTCGTTCTCGTGGTAATTTTCATCATAACGATGATGATCCAAGCCAAAGGTTTGATTTTTATTCATCTTTTCTTATTATTGTAATTGGGTCATAATGTAATTGAATTTTGCACAATTTGTTTATCTAAATTTGATTGATCATAGATACAGTAAAATGCTGTGGTAATTTTGCTAAATGATGCTTTCAACTATATGTGTAGGTCAAGGAGAAAGAAGAATGCTGCAAGTGGAGATAATTCAGAATCTGGAGTTGCAGGTACTTTTTCAACTATCATGTACCATTGTACTTGGTTAATTGTATAATGCACTATGAAATTGTACTGTGTAACTGCACTATGGAGATATTGTTTCTAAAATTTAAATTTACTATGTTTACAAATCAAATAAAAAGTGAATAGATATAAGTATAATGAGAAATGTTGTATATTTCGAATGCGAAACACGTGGCCGAACACGGTGATTTCCATCCAAGTTAAAGTTTATATTTTTCCATCTTTAAATATTATTTATGTTGTTTAAAAACCAATTGCATGTCGCCACCTTTGCATTCATCGATTTGTGTTGCTTGCTCTTCGTAAGGAGTAGCATAGCTCTTAGTATAATATATATTCGTACCATATAAGTCTTTAACTTTAATGTATTATAAAATTAGCCTGTGTTTGTTTCCACGTTGGAATTGTCCACAATTTGTAGCTTAGAAATCATCACCGTGGAATGTGTGCCAGGATGCGAGAAAATTGTTGCTGACACGTTACCAGACAAGCACTTCATGTGTACATGTTCAGTGGAGTATATGTTTGTAGATGTTGTTTTACGCTTCACTTTGACAATTTGTAGCTTCGAAATTATCACCGTGGGAAGTGTCGGGATGCGAGAAACTGTAACCGTATGTTTGGATCGAAGTGTAGGTTTGAAACGGAAATCCAAACATCCCTTAAATTACATTGTCATCTACCGAATACAAAATTCTTAATATCTTTCCGTATAACTGAATAAGTTGATGTTGACAGTTGTAATGGCAGGCCTGTGGAGTGTTTGTTTGAATAAAGATAGTGAACCATTTTTCGCTAAAGAATGAAATATACTATAACAGTGATTGTTATTTAGAGCTTCAATTGTCTATTTATTGATTTATTTAAGATTCATTGATATTGTTGAATGTTTGATAATAATTTTCCTGGTTTTTTGTGAGTCAGGTCAAGGAGCAGGTGAAGCGAAAAGGGCTTTGTATCATTGCAATTACTGTAATAAAGATATTACAGGAAAAATCCGTATCAAGTGTGCCATGTGCCCAGATTTTGACTTATGTATTGAGTGCTTTTCTGTTGGGGCTGAGGTGACACCCCACAAAAGCAATCATTCTTACAGGGTCATGGTGAGTAACCATTACTTTCAAATGTTTTCCTTTGATGTCTTATTAAACATAACCTTTTGATCAATCGAAAGGTTATACAGTAATTATCCTGCTAGACTGCAGGTTGATCACTCTGAGTTTAATTACAGGATTAATCATTTAAGTTAGATTCAAAATTATCTGATACTGTTTTTTTTATCACGTTGAGTATAAATCATATTTAAAATAATTTATGTATCTGCCAAACCGCTGTTATGAAAATTGCATTACCACTAGTTTCGCCGACATTGTTGTTATCATTGCTTTGTTTCTCTATCTATAAGAGAAACTATTTGGAAAGATTTCGAGGTTAACGAGTTGGATCCAAATATGGTTTATGATAGAACATTATGGCGTAATTTGATCCATGTAGCTAACTCCGCTTAGTGGGATAAGGCTTGGTTGTTGTTGTTGTATTGCTTTGTTTCTCTATATCAGTTTTTTAATACGGTTCCTTGTTGTCAGGATAATTTGTCTTTCCCTCTCATTTGCCCAGACTGGAATGCAGATGATGAAATTTTGCTTCTAGAGGTACTTGGTTTAAATTAATTGCCTAGGAGTAGCGGTGAATTTAATATGATAATATGATAAAGCATTATATTTGGTGTTGAAGAAGAAATCTACTATTAATATCTGACTTTTCTAGCAACAAATTTTTGGTTTTAGGGAATAGAAATGTATGGCATGGGAAACTGGGCAGAAGTTGCTGAGCATGTTGGAACAAAGAACAAAGAAGCATGCATAGAACACTATAGGAATGTGTACTTAAACTCCCCGTTCTTCCCTCTTCCGGTATGTCAGGCTTTGAATGAAGCTGCAATCAGTGCTTATCATATTCGTTTATATAAAGGTATTTTAAATGCTGACCATTCTTATTTACTAGGACATGTCTCATGTTGTTGGGAAAAACAGAAAAGAACTTCTTGCCATGGCGAAAGGGCAGGGTGAGGACAAGAAAGGTTTGTCTCAATACACAACATCACATTCATTAGTTTCTGTAGTTTTTGGGGAAAAAATGATTTCACTTACATAGCATACTGTTATAAATCAGGAATGTCTCATTTATCACTTCTTTTGGATAGATTTATATTGATATACTGTATCTCCAAACAATAAATAATAATGCCTCATTTATGTTGCTGATAACTGCTAAAATATGTTTCGGAGAATAAATTTATTATAATCTATGATTCTATGGCTTCTGATTTTTCGCTGATTGGTTGGTTTTTGTTTTGGTCACATTTTTATTTTATAAATATTGGTCACATTCTTCTTTATAAATACTGGTTACTTGTGATTGTAACAGGACTTCCCATGGGAGATCTTAGCATAAAGGAAGAATCACCCTTTTCTCCATCTAGAGTCAAGTAAGGCTGTCTTTTTTTGTACGCATTAACTCTTTCCATGTTCAATACCATGTTGATTGACTTCTAAATGTTGATTCAGAATGGAAGATTCCAACAAATCTGGTTCCACTGGCCGTTTGACTTCTAATATGAATTCAGGTAAGCTAAATAAGTCAATAGCTAAGATGTATACAACAATTTCCCAATTATAATTTCCTTTCAATCTCTATATTGTTTATATATTGTAGGGTCAGATTCTGGGCCCTCAGTCAACACACATGCTGCAGCTAGTGCTAACCAAAAGGCATCCAATAAAGGGCGGGGGAAAGGTGGTCCTGGAATTGTTAAAATGGAAGGTGTGCATTTTATATTTGGTCATAAATCCCAATTGACATTACACAATGCTGATTCTTTGATGAAATTCATCTCATGACTTTACATTCTGTATTTTATCCTAGTTCTTTTGTCATTGACAGATTCTCCAATGGACAGAGATTTTGGAGGAAATAAGCCAAATTCCTCAAGAAATGAAGGCCCTTCTTTGGTTGAAATCAGTGGTTATAACGCGAAAAGACAGGAATTCGATCCTGAATATGATAATGATGCTGAGCAATTACTCGCCGAAATGGAGTTTAAGGACACTGACACTGAGGAGGAGCGAGAGATCAAACTTCGTGTGCTGCGCATTTATTCAAAAAGGTAAACAACCATTTTAGTTTGGTATTTGTTGCATAGTATTGCTCACGTTCCTATCTTTAAATTGAAAAACGTTGCAGGCTTGATGAAAGAAAGCGCAGGAAGGAATTCATACTTGAAAGAAATTTGCTTTATCCAAATCCATTTGAGAAGGATTTAACACCCGAGGAAAAGTCAATATGCCGGAAATATGACATGTTCATGCGCTTTCATACTAAGGAAGAGCACGATGAATTACTCAGAACCGTTATCTCTGAACATAGGACTCTGAAAAGAATTCAAGAGCTTAAGGTTTGAGACATGGATGCCATTAAATTCTTATCGACATTCCTTTTTTTTTCTCTACTTGGAAAATTGAACAGTCATCTCTGACATTTGTTGAACATGATCGCAGGAAGCTCGTGCTGCTGGTTGCCGCAGTTCAGTTGAAGCAGATAGATATCTGGCGCATAAGAGAAGAAAGGAATCTGAAGAAAGTGCTTGTAGAGCGAGAGAAAGTGCTCATGTGGTCCCGAACAATCACGGGGTTCCAAATGCATTAATGTCTCCAGACTCTGCTGGTACCAGACCTGCAGGGTCAAGTTCTGTCAATGAAATGGATGCAACTGGATACTATGGAGCAGATTTACTTTCTGAAACTGTAAGAATAATTTTCTTCTGCCAAGTTTGCATTCTAAAACTGTACATTGCTTCTTATTTTGTTTTCTGAAACCATCGGCTGTAAATTCTGCCAGGAGAAACGTTTGTGCTGCGAGTTAAGGTTGCCTCCAACCGTTTATCTGAAGATGCAAGAGGACCTATCTGTACAAATGATTGCTGGCAACGTCTCTTCAAAATCTGATGCTCATCAAATGTTCAAGAATGTGGATACCATCAAAATTGACAGGGTGTATGATATGCTCATTAAGAAGGGAATTGGTTCATTCTGA
Protein sequence

>MS.gene047299.t1

MGRSRGNFHHNDDDPSQRSRRKKNAASGDNSESGVAGQGAGEAKRALYHCNYCNKDITGKIRIKCAMCPDFDLCIECFSVGAEVTPHKSNHSYRVMDNLSFPLICPDWNADDEILLLEGIEMYGMGNWAEVAEHVGTKNKEACIEHYRNVYLNSPFFPLPDMSHVVGKNRKELLAMAKGQGEDKKGLPMGDLSIKEESPFSPSRVKMEDSNKSGSTGRLTSNMNSGSDSGPSVNTHAAASANQKASNKGRGKGGPGIVKMEDSPMDRDFGGNKPNSSRNEGPSLVEISGYNAKRQEFDPEYDNDAEQLLAEMEFKDTDTEEEREIKLRVLRIYSKRLDERKRRKEFILERNLLYPNPFEKDLTPEEKSICRKYDMFMRFHTKEEHDELLRTVISEHRTLKRIQELKEARAAGCRSSVEADRYLAHKRRKESEESACRARESAHVVPNNHGVPNALMSPDSAGTRPAGSSSVNEMDATGYYGADLLSETEKRLCCELRLPPTVYLKMQEDLSVQMIAGNVSSKSDAHQMFKNVDTIKIDRVYDMLIKKGIGSF