Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047300.t1 | XP_003594269.2 | 91.3 | 504 | 30 | 4 | 1 | 499 | 1 | 495 | 9.00E-256 | 892.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047300.t1 | Q9ATB4 | 56.3 | 483 | 189 | 8 | 19 | 496 | 19 | 484 | 1.2e-139 | 498.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047300.t1 | G7IPB0 | 91.3 | 504 | 30 | 4 | 1 | 499 | 1 | 495 | 6.5e-256 | 892.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene047300.t1 | TF | MYB-related |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene010619 | MS.gene047300 | PPI |
MS.gene047300 | MS.gene68059 | PPI |
MS.gene047300 | MS.gene64762 | PPI |
MS.gene59465 | MS.gene047300 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047300.t1 | MTR_2g026380 | 91.270 | 504 | 30 | 4 | 1 | 499 | 1 | 495 | 0.0 | 918 |
MS.gene047300.t1 | MTR_2g026310 | 71.269 | 536 | 97 | 4 | 18 | 499 | 19 | 551 | 0.0 | 760 |
MS.gene047300.t1 | MTR_7g063290 | 73.016 | 504 | 114 | 5 | 1 | 499 | 1 | 487 | 0.0 | 686 |
MS.gene047300.t1 | MTR_3g081360 | 47.287 | 516 | 227 | 8 | 17 | 496 | 4 | 510 | 4.08e-155 | 451 |
MS.gene047300.t1 | MTR_3g082790 | 46.961 | 543 | 222 | 7 | 18 | 496 | 21 | 561 | 1.24e-149 | 439 |
MS.gene047300.t1 | MTR_3g082790 | 47.490 | 518 | 206 | 7 | 43 | 496 | 6 | 521 | 5.03e-146 | 429 |
MS.gene047300.t1 | MTR_3g081420 | 78.947 | 209 | 43 | 1 | 291 | 499 | 2 | 209 | 1.04e-111 | 329 |
MS.gene047300.t1 | MTR_3g081380 | 55.682 | 176 | 74 | 2 | 6 | 179 | 4 | 177 | 6.85e-62 | 201 |
MS.gene047300.t1 | MTR_3g081410 | 76.404 | 89 | 19 | 1 | 324 | 410 | 1 | 89 | 1.11e-35 | 129 |
MS.gene047300.t1 | MTR_7g062030 | 70.787 | 89 | 24 | 1 | 9 | 97 | 23 | 109 | 3.06e-30 | 115 |
MS.gene047300.t1 | MTR_3g081390 | 58.889 | 90 | 37 | 0 | 91 | 180 | 36 | 125 | 2.90e-28 | 109 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047300.t1 | AT4G16420 | 56.289 | 485 | 191 | 7 | 18 | 498 | 18 | 485 | 0.0 | 537 |
MS.gene047300.t1 | AT4G16420 | 56.327 | 490 | 180 | 9 | 18 | 498 | 18 | 482 | 0.0 | 536 |
MS.gene047300.t1 | AT4G16420 | 56.173 | 486 | 191 | 8 | 18 | 498 | 18 | 486 | 0.0 | 533 |
MS.gene047300.t1 | AT3G07740 | 42.056 | 535 | 246 | 9 | 18 | 497 | 20 | 545 | 1.26e-134 | 400 |
MS.gene047300.t1 | AT3G07740 | 42.750 | 531 | 239 | 10 | 23 | 497 | 3 | 524 | 1.21e-133 | 397 |
MS.gene047300.t1 | AT3G07740 | 41.513 | 542 | 246 | 10 | 18 | 497 | 20 | 552 | 8.78e-132 | 394 |
MS.gene047300.t1 | AT3G07740 | 42.324 | 482 | 214 | 9 | 71 | 497 | 2 | 474 | 2.68e-118 | 356 |
Find 109 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTTCATTTCTTGAGGAATT+TGG | 0.149009 | 2.1:+63790258 | None:intergenic |
AGACAGAAGAATGCTTTATT+TGG | 0.172431 | 2.1:-63792006 | MS.gene047300:CDS |
TTTGGAGATAATTCAGAATT+TGG | 0.173645 | 2.1:-63791988 | MS.gene047300:CDS |
TCTCCAAAGGACGGAGATTT+TGG | 0.187602 | 2.1:-63790291 | MS.gene047300:CDS |
CAGTTCCTCTAATGCTTTCT+TGG | 0.220518 | 2.1:+63793261 | None:intergenic |
AAATGTATGGCCTGGAAAAT+TGG | 0.221477 | 2.1:-63790895 | MS.gene047300:CDS |
TCTTCATCTGCACTCCAGTC+TGG | 0.242682 | 2.1:+63791074 | None:intergenic |
CTTGAAGTAGCTGGCCTTGC+AGG | 0.265434 | 2.1:+63789471 | None:intergenic |
TTATCAAATGTTCAAGAATA+TGG | 0.293541 | 2.1:-63789194 | MS.gene047300:CDS |
TTCGGAACCCCGTGATTGTT+CGG | 0.302629 | 2.1:+63789528 | None:intergenic |
TCAGCATCATCGTCATATTC+AGG | 0.306131 | 2.1:+63790183 | None:intergenic |
AAGGAGCAGGTGAAGCAAAA+TGG | 0.330889 | 2.1:-63791523 | MS.gene047300:CDS |
CCTCCAAAATCTCCGTCCTT+TGG | 0.332116 | 2.1:+63790288 | None:intergenic |
GCATGAACACGTCATATTTC+CGG | 0.336745 | 2.1:+63789854 | None:intergenic |
ACAAAAGCAATCATGATTAC+AGG | 0.344529 | 2.1:-63791376 | MS.gene047300:CDS |
TTATACGTATCTATAATAAA+AGG | 0.350745 | 2.1:-63790092 | MS.gene047300:intron |
CTCTCCGGTCTTCCCTCTTC+CGG | 0.360280 | 2.1:-63790798 | MS.gene047300:intron |
AGTAGCTGGCCTTGCAGGTC+TGG | 0.368209 | 2.1:+63789476 | None:intergenic |
ACCATCCAAGAAAGCATTAG+AGG | 0.372484 | 2.1:-63793266 | MS.gene047300:CDS |
TCGGAACCCCGTGATTGTTC+GGG | 0.378631 | 2.1:+63789529 | None:intergenic |
TGCAGCTGGTGCTAACAAAA+AGG | 0.378782 | 2.1:-63790419 | MS.gene047300:CDS |
TCCTCTAATGCTTTCTTGGA+TGG | 0.379688 | 2.1:+63793265 | None:intergenic |
CTTCATCTGCACTCCAGTCT+GGG | 0.385677 | 2.1:+63791075 | None:intergenic |
TCAACACATAAGTCAAAATC+AGG | 0.387672 | 2.1:+63791431 | None:intergenic |
AGCTGAAGCAGATATATATC+TGG | 0.388984 | 2.1:-63789616 | MS.gene047300:CDS |
GGTGTTAAATCCTTCTCAAA+TGG | 0.404781 | 2.1:+63789895 | None:intergenic |
GAATTTGGTGCTGCTGCTCC+AGG | 0.409359 | 2.1:-63791973 | MS.gene047300:intron |
GGATTTAACACCCGAGGAAA+AGG | 0.418496 | 2.1:-63789884 | MS.gene047300:CDS |
ATGCTCATTAAGAAGGGTAT+TGG | 0.420108 | 2.1:-63789142 | MS.gene047300:CDS |
TCCAATAAAGGCCGGGGAAA+AGG | 0.423031 | 2.1:-63790394 | MS.gene047300:intron |
TGAGAAATTACTCACTGATA+TGG | 0.424714 | 2.1:-63790163 | MS.gene047300:CDS |
AACGTTTGTGCTGCGAGTTA+AGG | 0.442285 | 2.1:-63789300 | MS.gene047300:CDS |
TTCCTCTCATCTCCCCAGAC+TGG | 0.451454 | 2.1:-63791088 | MS.gene047300:CDS |
GGTCTGGTACCAGCAGAGTC+TGG | 0.454618 | 2.1:+63789492 | None:intergenic |
CTGTCGGTACAAATGATTGC+TGG | 0.454974 | 2.1:-63789241 | MS.gene047300:CDS |
GGGAATTGAAATGTATGGCC+TGG | 0.457047 | 2.1:-63790903 | MS.gene047300:CDS |
GAACTTCTTGCAACGGCGAA+AGG | 0.459906 | 2.1:-63790649 | MS.gene047300:CDS |
GTTCATGCGCTTTCATACTA+AGG | 0.465103 | 2.1:-63789839 | MS.gene047300:CDS |
AAGAAATGAAGGCCGTACTT+TGG | 0.471852 | 2.1:-63790247 | MS.gene047300:CDS |
AGGAGCAGGTGAAGCAAAAT+GGG | 0.476294 | 2.1:-63791522 | MS.gene047300:CDS |
ATGTGGTCCCGAACAATCAC+GGG | 0.476754 | 2.1:-63789536 | MS.gene047300:CDS |
AATGTATGGCCTGGAAAATT+GGG | 0.480655 | 2.1:-63790894 | MS.gene047300:CDS |
TGGATCCCATGAAAATTGAC+AGG | 0.487796 | 2.1:-63789174 | MS.gene047300:CDS |
TACTGCAAGAAAGATATTAC+CGG | 0.489315 | 2.1:-63791482 | MS.gene047300:CDS |
AAAGAAGTGCTCGCGGGGCA+AGG | 0.490951 | 2.1:-63789569 | MS.gene047300:CDS |
AACTTCTTGCAACGGCGAAA+GGG | 0.492732 | 2.1:-63790648 | MS.gene047300:CDS |
AAAGGCATCCAATAAAGGCC+GGG | 0.494520 | 2.1:-63790401 | MS.gene047300:CDS |
CTTGAACATTTGATAAGCAT+CGG | 0.496085 | 2.1:+63789201 | None:intergenic |
AGGGTCGGATTCTGGGTCCT+CGG | 0.499489 | 2.1:-63790455 | MS.gene047300:CDS |
GTATGATATGCTCATTAAGA+AGG | 0.500449 | 2.1:-63789149 | MS.gene047300:CDS |
AGGACATGTCTCATGCTGTT+GGG | 0.502752 | 2.1:-63790684 | MS.gene047300:CDS |
GAAGCCTATCATACCGGAAG+AGG | 0.505742 | 2.1:+63790785 | None:intergenic |
CAGTTCTGAGCAATTCATCA+TGG | 0.506351 | 2.1:+63789812 | None:intergenic |
CAGCAATCATTTGTACCGAC+AGG | 0.513175 | 2.1:+63789242 | None:intergenic |
TAGGACATGTCTCATGCTGT+TGG | 0.513693 | 2.1:-63790685 | MS.gene047300:CDS |
CCAAATTCCTCAAGAAATGA+AGG | 0.515725 | 2.1:-63790258 | MS.gene047300:CDS |
TCTGGAGACATCAATGCATT+CGG | 0.516271 | 2.1:+63789510 | None:intergenic |
GTCTACACACATGCTGCAGC+TGG | 0.516899 | 2.1:-63790433 | MS.gene047300:CDS |
AAAAGGCATCCAATAAAGGC+CGG | 0.525388 | 2.1:-63790402 | MS.gene047300:CDS |
GGCACACGGCACACTTGATA+CGG | 0.529984 | 2.1:+63791453 | None:intergenic |
TGGTTATAACCCGAAAAGAC+AGG | 0.531230 | 2.1:-63790214 | MS.gene047300:CDS |
CTCTTGCATCTTCAGATACA+CGG | 0.533130 | 2.1:+63789267 | None:intergenic |
TTCATCTGCACTCCAGTCTG+GGG | 0.535702 | 2.1:+63791076 | None:intergenic |
TTGACGGCACTTGAAGTAGC+TGG | 0.536839 | 2.1:+63789462 | None:intergenic |
TAAGAACAAAGAGGCATGCA+TGG | 0.541880 | 2.1:-63790846 | MS.gene047300:CDS |
AGTACGGCCTTCATTTCTTG+AGG | 0.551492 | 2.1:+63790251 | None:intergenic |
CATACCGGAAGAGGGAAGAC+CGG | 0.552809 | 2.1:+63790794 | None:intergenic |
TGCATCTTCAGATACACGGT+TGG | 0.556814 | 2.1:+63789271 | None:intergenic |
TTGATGTCTCCAGACTCTGC+TGG | 0.561285 | 2.1:-63789501 | MS.gene047300:CDS |
CACTGGCTTCAACCAAAGTA+CGG | 0.564700 | 2.1:+63790235 | None:intergenic |
CTTGCAACGGCGAAAGGGCA+AGG | 0.565938 | 2.1:-63790643 | MS.gene047300:intron |
AAGAAGTGCTCGCGGGGCAA+GGG | 0.565994 | 2.1:-63789568 | MS.gene047300:CDS |
CCGCAGGAAGCAATTGCTGC+TGG | 0.571283 | 2.1:-63789651 | MS.gene047300:intron |
CGTACTTTGGTTGAAGCCAG+TGG | 0.574934 | 2.1:-63790234 | MS.gene047300:CDS |
TGTGAGATAGGTCAAGGAGC+AGG | 0.575240 | 2.1:-63791536 | MS.gene047300:intron |
ATATGAAAATCCATTTGAGA+AGG | 0.582614 | 2.1:-63789905 | MS.gene047300:CDS |
CATGTGGTCCCGAACAATCA+CGG | 0.583150 | 2.1:-63789537 | MS.gene047300:CDS |
GTCATTGACAGATTCTCCAA+AGG | 0.585654 | 2.1:-63790304 | MS.gene047300:intron |
CCGAGGAAAAGGCAATATGC+CGG | 0.591718 | 2.1:-63789873 | MS.gene047300:CDS |
AAGGCATCCAATAAAGGCCG+GGG | 0.595048 | 2.1:-63790400 | MS.gene047300:CDS |
TGAAGAAATGTTGATTCTAG+AGG | 0.597822 | 2.1:-63791057 | MS.gene047300:intron |
CAAAAGCAATCATGATTACA+GGG | 0.598809 | 2.1:-63791375 | MS.gene047300:CDS |
TATGATATGCTCATTAAGAA+GGG | 0.601699 | 2.1:-63789148 | MS.gene047300:CDS |
CAATCATGATTACAGGGTCA+TGG | 0.603132 | 2.1:-63791369 | MS.gene047300:intron |
AAGCTGAAAGAAGTGCTCGC+GGG | 0.610780 | 2.1:-63789575 | MS.gene047300:CDS |
CAGAGAAGAACTTCTTGCAA+CGG | 0.616082 | 2.1:-63790656 | MS.gene047300:CDS |
AAGCCTATCATACCGGAAGA+GGG | 0.618355 | 2.1:+63790786 | None:intergenic |
GCAGAAGTAGCTGAGCATGT+TGG | 0.618695 | 2.1:-63790872 | MS.gene047300:CDS |
CTCCAGTCTGGGGAGATGAG+AGG | 0.625328 | 2.1:+63791086 | None:intergenic |
AGCTGAAAGAAGTGCTCGCG+GGG | 0.625716 | 2.1:-63789574 | MS.gene047300:CDS |
TGAGAAGGATTTAACACCCG+AGG | 0.635433 | 2.1:-63789890 | MS.gene047300:CDS |
TTGACAGATTCTCCAAAGGA+CGG | 0.643226 | 2.1:-63790300 | MS.gene047300:intron |
GAAGCTGAAAGAAGTGCTCG+CGG | 0.649791 | 2.1:-63789576 | MS.gene047300:CDS |
TAAGTCAAAATCAGGGCACA+CGG | 0.654683 | 2.1:+63791439 | None:intergenic |
GAAGATGCAAGAGGACCTGT+CGG | 0.659393 | 2.1:-63789257 | MS.gene047300:CDS |
CGTGTATCTGAAGATGCAAG+AGG | 0.659698 | 2.1:-63789266 | MS.gene047300:CDS |
GGCAAGGGAAAGTACTCATG+TGG | 0.660030 | 2.1:-63789553 | MS.gene047300:CDS |
TAATGACAATGACACTGAGG+AGG | 0.665463 | 2.1:-63790136 | MS.gene047300:CDS |
ACACTTGATACGGATTACTC+CGG | 0.666906 | 2.1:+63791463 | None:intergenic |
CAACACATAAGTCAAAATCA+GGG | 0.668458 | 2.1:+63791432 | None:intergenic |
TATCTGCTTCAGCTGAAGTG+CGG | 0.668725 | 2.1:+63789625 | None:intergenic |
GGCTTGATGAAAGAGAGCGC+AGG | 0.673278 | 2.1:-63789957 | MS.gene047300:CDS |
AGATTAAGAGAGGTCTCAGG+GGG | 0.692267 | 2.1:+63789117 | None:intergenic |
TGCAGCATGTGTGTAGACCG+AGG | 0.695707 | 2.1:+63790438 | None:intergenic |
GGATCCCATGAAAATTGACA+GGG | 0.695744 | 2.1:-63789173 | MS.gene047300:CDS |
CTGCTGGTACCAGACCTGCA+AGG | 0.696399 | 2.1:-63789485 | MS.gene047300:CDS |
TGTTGGAACTAAGAACAAAG+AGG | 0.697393 | 2.1:-63790855 | MS.gene047300:CDS |
TGTGGTCCCGAACAATCACG+GGG | 0.753110 | 2.1:-63789535 | MS.gene047300:CDS |
GTTTAATGACAATGACACTG+AGG | 0.755990 | 2.1:-63790139 | MS.gene047300:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TCTATTGTTTATATATTTTA+GGG | - | chr2.1:63791947-63791966 | MS.gene047300:intron | 10.0% |
!! | AAAAATATCATGATAGAATA+GGG | + | chr2.1:63790338-63790357 | None:intergenic | 15.0% |
!! | AAAAATGCTTTAATTCATAT+TGG | + | chr2.1:63789973-63789992 | None:intergenic | 15.0% |
!! | AATAATTTATGCTTGTTTAT+CGG | - | chr2.1:63791191-63791210 | MS.gene047300:intron | 15.0% |
!! | ATAAAATATGAAAAATTGCA+AGG | + | chr2.1:63789250-63789269 | None:intergenic | 15.0% |
!! | TAAAAATATTAAACTCAAAG+AGG | + | chr2.1:63789746-63789765 | None:intergenic | 15.0% |
!! | TAAAATATGAAAAATTGCAA+GGG | + | chr2.1:63789249-63789268 | None:intergenic | 15.0% |
!! | TATAGAATTAATAAGTACAA+TGG | + | chr2.1:63790495-63790514 | None:intergenic | 15.0% |
!! | TTATACGTATCTATAATAAA+AGG | - | chr2.1:63792329-63792348 | MS.gene047300:intron | 15.0% |
!!! | AATTTGCTTATAAAAAGAAA+CGG | - | chr2.1:63789507-63789526 | MS.gene047300:CDS | 15.0% |
!!! | AATTTGCTTATAAAAAGAAA+CGG | + | chr2.1:63789526-63789507 | None:intergenic | 15.0% |
!!! | ATAGTTTTAAAATGAAAACA+TGG | + | chr2.1:63793045-63793064 | None:intergenic | 15.0% |
!!! | CTCTATTGTTTATATATTTT+AGG | - | chr2.1:63791946-63791965 | MS.gene047300:intron | 15.0% |
!!! | TAGTAATACAATTTTCTTAA+CGG | + | chr2.1:63791225-63791244 | None:intergenic | 15.0% |
!!! | TTTAGATTAGTTTTTTAACA+CGG | - | chr2.1:63791284-63791303 | MS.gene047300:intron | 15.0% |
!!! | TTTTCTTTTCATTTTCAAAA+AGG | - | chr2.1:63790785-63790804 | MS.gene047300:intron | 15.0% |
!! | AAAGAAAATGAGAAATGATT+TGG | + | chr2.1:63790117-63790136 | None:intergenic | 20.0% |
!! | AACTATAGCTATAAGTATTA+TGG | - | chr2.1:63790542-63790561 | MS.gene047300:intron | 20.0% |
!! | AATGAAAAGAAAAAAATCCA+TGG | + | chr2.1:63790778-63790797 | None:intergenic | 20.0% |
!! | ACATCCAAATTAAATTCATT+CGG | + | chr2.1:63789671-63789690 | None:intergenic | 20.0% |
!! | AGAAACCTATAAAACTAAAA+TGG | + | chr2.1:63792362-63792381 | None:intergenic | 20.0% |
!! | AGACAATCATAAATTTACAA+AGG | + | chr2.1:63789545-63789564 | None:intergenic | 20.0% |
!! | ATAATTATGTCTTGTAAGTA+AGG | - | chr2.1:63789635-63789654 | MS.gene047300:CDS | 20.0% |
!! | ATAATTATTCTTTCAAAGAG+AGG | + | chr2.1:63789623-63789642 | None:intergenic | 20.0% |
!! | ATTCATTCATTTATGATTCA+TGG | - | chr2.1:63790835-63790854 | MS.gene047300:CDS | 20.0% |
!! | CAAAAATATCATGATAGAAT+AGG | + | chr2.1:63790339-63790358 | None:intergenic | 20.0% |
!! | TATAATATTCGTTCATATCA+AGG | - | chr2.1:63791684-63791703 | MS.gene047300:intron | 20.0% |
!! | TTATCAAATGTTCAAGAATA+TGG | - | chr2.1:63793227-63793246 | MS.gene047300:intron | 20.0% |
!!! | AACAACCATTTTAGTTTTAT+AGG | - | chr2.1:63792354-63792373 | MS.gene047300:intron | 20.0% |
!!! | ACATTTTTCAATTTGAAGAT+AGG | + | chr2.1:63792440-63792459 | None:intergenic | 20.0% |
!!! | ACTAATTTTGATTTGATGAT+AGG | - | chr2.1:63789902-63789921 | MS.gene047300:CDS | 20.0% |
!!! | ACTTATGTGATTAATTTTGA+TGG | + | chr2.1:63789823-63789842 | None:intergenic | 20.0% |
!!! | AGCTATAATATTTTCGTTTT+AGG | - | chr2.1:63791497-63791516 | MS.gene047300:CDS | 20.0% |
!!! | ATAAAAAAGTGAAGTGTTAA+TGG | + | chr2.1:63790020-63790039 | None:intergenic | 20.0% |
!!! | ATTTTCAAAAAGGAAACATT+AGG | - | chr2.1:63790795-63790814 | MS.gene047300:intron | 20.0% |
!!! | CTTATGTGATTAATTTTGAT+GGG | + | chr2.1:63789822-63789841 | None:intergenic | 20.0% |
!!! | GCTATAATATTTTCGTTTTA+GGG | - | chr2.1:63791498-63791517 | MS.gene047300:CDS | 20.0% |
!!! | GTACTTTTATTTACTGTATA+GGG | - | chr2.1:63790387-63790406 | MS.gene047300:intron | 20.0% |
!!! | TGAAAATAATTTTGTGAGAT+AGG | - | chr2.1:63790873-63790892 | MS.gene047300:CDS | 20.0% |
!!! | TGTACTTTTATTTACTGTAT+AGG | - | chr2.1:63790386-63790405 | MS.gene047300:intron | 20.0% |
!!! | TTGCTTCAGTTTTTTTTTTT+TGG | + | chr2.1:63790167-63790186 | None:intergenic | 20.0% |
!!! | TTGTTTATATATTTTAGGGT+CGG | - | chr2.1:63791951-63791970 | MS.gene047300:intron | 20.0% |
!!! | TTTAGCTTAAGATATGATAT+AGG | - | chr2.1:63790747-63790766 | MS.gene047300:intron | 20.0% |
!!! | TTTTAGATTAGATTAGACAT+AGG | - | chr2.1:63789761-63789780 | MS.gene047300:intron | 20.0% |
!!! | TTTTCAAAAAGGAAACATTA+GGG | - | chr2.1:63790796-63790815 | MS.gene047300:intron | 20.0% |
! | AAAGAATTGGCAATAATGAA+TGG | + | chr2.1:63789996-63790015 | None:intergenic | 25.0% |
! | AAGTGTTAATGGAAAAGAAT+TGG | + | chr2.1:63790009-63790028 | None:intergenic | 25.0% |
! | AATGTCAATTGTGATTTATG+AGG | + | chr2.1:63792069-63792088 | None:intergenic | 25.0% |
! | AGGAAAACATTTGAAAGTAA+TGG | + | chr2.1:63791085-63791104 | None:intergenic | 25.0% |
! | AGGATACTTTGAATAATTGT+CGG | - | chr2.1:63789781-63789800 | MS.gene047300:CDS | 25.0% |
! | ATATGAAAATCCATTTGAGA+AGG | - | chr2.1:63792516-63792535 | MS.gene047300:intron | 25.0% |
! | CATTCAATTAATGATGTATG+TGG | - | chr2.1:63789434-63789453 | MS.gene047300:CDS | 25.0% |
! | CATTCCGAATGAATTTAATT+TGG | - | chr2.1:63789664-63789683 | MS.gene047300:intron | 25.0% |
! | CATTCTATTAATGATGTATG+TGG | + | chr2.1:63789473-63789492 | None:intergenic | 25.0% |
! | CGAAAAAGTCTATTATTCAA+TGG | - | chr2.1:63790273-63790292 | MS.gene047300:CDS | 25.0% |
! | GAATGTCCATAACAATTTAA+TGG | + | chr2.1:63792695-63792714 | None:intergenic | 25.0% |
! | GCAAAGTAATAATATCTTGT+TGG | + | chr2.1:63790143-63790162 | None:intergenic | 25.0% |
! | TATGATATGCTCATTAAGAA+GGG | - | chr2.1:63793273-63793292 | MS.gene047300:CDS | 25.0% |
! | TTCAAATTGAAAAATGTTGC+AGG | - | chr2.1:63792443-63792462 | MS.gene047300:intron | 25.0% |
! | TTTGGAGATAATTCAGAATT+TGG | - | chr2.1:63790433-63790452 | MS.gene047300:CDS | 25.0% |
!! | ATATGACAAAGCACTATATT+TGG | - | chr2.1:63791435-63791454 | MS.gene047300:CDS | 25.0% |
!! | TAATACAATTTTCTTAACGG+TGG | + | chr2.1:63791222-63791241 | None:intergenic | 25.0% |
!!! | AACAAATATGATTTTGAGTG+TGG | + | chr2.1:63792398-63792417 | None:intergenic | 25.0% |
!!! | ATTCACTTTTTTTCTCTACT+TGG | - | chr2.1:63792711-63792730 | MS.gene047300:intron | 25.0% |
!!! | GATTAATTTTGATGGGTTTT+TGG | + | chr2.1:63789815-63789834 | None:intergenic | 25.0% |
!!! | GCTGATTTTTCTTATTTACT+AGG | - | chr2.1:63791717-63791736 | MS.gene047300:intron | 25.0% |
!!! | TAATAGACTTTTTCGACTAT+AGG | + | chr2.1:63790268-63790287 | None:intergenic | 25.0% |
!!! | TTTCTTTTGAAGAATTGTGT+AGG | + | chr2.1:63789935-63789954 | None:intergenic | 25.0% |
!!! | TTTTAAAATGAAAACATGGC+AGG | + | chr2.1:63793041-63793060 | None:intergenic | 25.0% |
!!! | TTTTAGGGAATTGAAATGTA+TGG | - | chr2.1:63791513-63791532 | MS.gene047300:CDS | 25.0% |
!!! | TTTTTTCTCTACTTGGAAAA+TGG | - | chr2.1:63792718-63792737 | MS.gene047300:intron | 25.0% |
ACAAAAGCAATCATGATTAC+AGG | - | chr2.1:63791045-63791064 | MS.gene047300:intron | 30.0% | |
AGACAATTTATTCTGCAACA+TGG | + | chr2.1:63791312-63791331 | None:intergenic | 30.0% | |
ATGAAAAATTGCAAGGGAAA+GGG | + | chr2.1:63789243-63789262 | None:intergenic | 30.0% | |
CAAAAGCAATCATGATTACA+GGG | - | chr2.1:63791046-63791065 | MS.gene047300:intron | 30.0% | |
CAACACATAAGTCAAAATCA+GGG | + | chr2.1:63790992-63791011 | None:intergenic | 30.0% | |
CTTGAACATTTGATAAGCAT+CGG | + | chr2.1:63793223-63793242 | None:intergenic | 30.0% | |
CTTTACGTGCAAAATTGATT+AGG | - | chr2.1:63789877-63789896 | MS.gene047300:CDS | 30.0% | |
GATGTATGTGGTTCATAATA+TGG | - | chr2.1:63789446-63789465 | MS.gene047300:CDS | 30.0% | |
GTATGATATGCTCATTAAGA+AGG | - | chr2.1:63793272-63793291 | MS.gene047300:CDS | 30.0% | |
GTTAAGGAAAGAGTTTATCT+TGG | + | chr2.1:63790048-63790067 | None:intergenic | 30.0% | |
TACTGCAAGAAAGATATTAC+CGG | - | chr2.1:63790939-63790958 | MS.gene047300:intron | 30.0% | |
TATGAAAAATTGCAAGGGAA+AGG | + | chr2.1:63789244-63789263 | None:intergenic | 30.0% | |
TCAACACATAAGTCAAAATC+AGG | + | chr2.1:63790993-63791012 | None:intergenic | 30.0% | |
TGAGAAATTACTCACTGATA+TGG | - | chr2.1:63792258-63792277 | MS.gene047300:intron | 30.0% | |
TGCTTATAAAAAGAAACGGA+GGG | - | chr2.1:63789511-63789530 | MS.gene047300:CDS | 30.0% | |
TGCTTATAAAAAGAAACGGA+GGG | + | chr2.1:63789530-63789511 | None:intergenic | 30.0% | |
TGGATGCCATTAAATTGTTA+TGG | - | chr2.1:63792686-63792705 | MS.gene047300:intron | 30.0% | |
TTGCTTATAAAAAGAAACGG+AGG | - | chr2.1:63789510-63789529 | MS.gene047300:CDS | 30.0% | |
TTGCTTATAAAAAGAAACGG+AGG | + | chr2.1:63789529-63789510 | None:intergenic | 30.0% | |
TTGGTTTAAACTAATTGCGT+AGG | - | chr2.1:63791390-63791409 | MS.gene047300:CDS | 30.0% | |
TTTATTTACTGTATAGGGCA+AGG | - | chr2.1:63790392-63790411 | MS.gene047300:intron | 30.0% | |
! | AGACAGAAGAATGCTTTATT+TGG | - | chr2.1:63790415-63790434 | MS.gene047300:CDS | 30.0% |
! | AGAGGCATAATTATCATTTG+AGG | + | chr2.1:63789605-63789624 | None:intergenic | 30.0% |
! | GAAAAAGATTCTAGAGACTA+AGG | - | chr2.1:63792654-63792673 | MS.gene047300:intron | 30.0% |
! | GTAAAGTGAAAGTTAGTTTG+TGG | + | chr2.1:63789863-63789882 | None:intergenic | 30.0% |
! | TAAGGAAGTTGATTCTGTTA+AGG | + | chr2.1:63790064-63790083 | None:intergenic | 30.0% |
! | TAATTTTGTGAGATAGGTCA+AGG | - | chr2.1:63790879-63790898 | MS.gene047300:CDS | 30.0% |
!! | AACAAAAAGGCATCCAATAA+AGG | - | chr2.1:63792015-63792034 | MS.gene047300:CDS | 30.0% |
!! | AGACATGAAGTTTGTTTTCA+TGG | + | chr2.1:63789219-63789238 | None:intergenic | 30.0% |
!! | AGTTTGTTTTCATGGTTGAT+TGG | + | chr2.1:63789211-63789230 | None:intergenic | 30.0% |
!! | ATTAAACTCAAAGAGGTACT+AGG | + | chr2.1:63789739-63789758 | None:intergenic | 30.0% |
!! | GTAATCATGATTGCTTTTGT+GGG | + | chr2.1:63791045-63791064 | None:intergenic | 30.0% |
!! | TAATCATGATTGCTTTTGTG+GGG | + | chr2.1:63791044-63791063 | None:intergenic | 30.0% |
!! | TGAAGAAATGTTGATTCTAG+AGG | - | chr2.1:63791364-63791383 | MS.gene047300:intron | 30.0% |
!! | TGTAATCATGATTGCTTTTG+TGG | + | chr2.1:63791046-63791065 | None:intergenic | 30.0% |
!!! | ATTTTGTTTTCTGAAACCGT+CGG | - | chr2.1:63793077-63793096 | MS.gene047300:intron | 30.0% |
!!! | CACATAAGTTAGTTTTCAAG+CGG | - | chr2.1:63789834-63789853 | MS.gene047300:CDS | 30.0% |
!!! | TTTCTTGGATGGTTTTTTCT+TGG | + | chr2.1:63789148-63789167 | None:intergenic | 30.0% |
AAACAACAAGCAACGTGAAA+TGG | + | chr2.1:63790606-63790625 | None:intergenic | 35.0% | |
AAATGTATGGCCTGGAAAAT+TGG | - | chr2.1:63791526-63791545 | MS.gene047300:CDS | 35.0% | |
AACTAATTGCGTAGGAGTAA+CGG | - | chr2.1:63791398-63791417 | MS.gene047300:CDS | 35.0% | |
AATGTATGGCCTGGAAAATT+GGG | - | chr2.1:63791527-63791546 | MS.gene047300:CDS | 35.0% | |
AGCTGAAGCAGATATATATC+TGG | - | chr2.1:63792805-63792824 | MS.gene047300:intron | 35.0% | |
ATTTGGATGTGTGTACTCAT+AGG | - | chr2.1:63789681-63789700 | MS.gene047300:intron | 35.0% | |
CCAAATTCCTCAAGAAATGA+AGG | - | chr2.1:63792163-63792182 | MS.gene047300:intron | 35.0% | |
CCTTCATTTCTTGAGGAATT+TGG | + | chr2.1:63792166-63792185 | None:intergenic | 35.0% | |
GAAATGGAAGAATGCAAACA+TGG | + | chr2.1:63790590-63790609 | None:intergenic | 35.0% | |
GAGAATCTGTCAATGACAAA+AGG | + | chr2.1:63792114-63792133 | None:intergenic | 35.0% | |
GGTGTTAAATCCTTCTCAAA+TGG | + | chr2.1:63792529-63792548 | None:intergenic | 35.0% | |
GTTTAATGACAATGACACTG+AGG | - | chr2.1:63792282-63792301 | MS.gene047300:intron | 35.0% | |
TGATAGAAAATTACAGCCGA+CGG | + | chr2.1:63793096-63793115 | None:intergenic | 35.0% | |
TGTCAATGACAAAAGGACTA+GGG | + | chr2.1:63792107-63792126 | None:intergenic | 35.0% | |
TGTTGGAACTAAGAACAAAG+AGG | - | chr2.1:63791566-63791585 | MS.gene047300:intron | 35.0% | |
TTATTCGAAGCCTATCATAC+CGG | + | chr2.1:63791645-63791664 | None:intergenic | 35.0% | |
! | ACAATTTTCTTAACGGTGGT+TGG | + | chr2.1:63791218-63791237 | None:intergenic | 35.0% |
! | ATACACCCTGTCAATTTTCA+TGG | + | chr2.1:63793256-63793275 | None:intergenic | 35.0% |
! | ATATGATATAGGTGTTGCCA+TGG | - | chr2.1:63790758-63790777 | MS.gene047300:intron | 35.0% |
! | ATGCTCATTAAGAAGGGTAT+TGG | - | chr2.1:63793279-63793298 | MS.gene047300:CDS | 35.0% |
! | CAATTTTCTTAACGGTGGTT+GGG | + | chr2.1:63791217-63791236 | None:intergenic | 35.0% |
! | GAAGTTTTACTTGAACTCTC+CGG | - | chr2.1:63791608-63791627 | MS.gene047300:intron | 35.0% |
! | TACACCCTGTCAATTTTCAT+GGG | + | chr2.1:63793255-63793274 | None:intergenic | 35.0% |
!! | AGAGTGTTTTGTTGCATTGA+CGG | + | chr2.1:63792978-63792997 | None:intergenic | 35.0% |
!! | ATGATAGTTGAAAAAGCACC+TGG | + | chr2.1:63790469-63790488 | None:intergenic | 35.0% |
!! | ATGTTGATTCTAGAGGTACT+TGG | - | chr2.1:63791371-63791390 | MS.gene047300:CDS | 35.0% |
!!! | ATATTTTAGGGTCGGATTCT+GGG | - | chr2.1:63791959-63791978 | MS.gene047300:intron | 35.0% |
!!! | TATATTTTAGGGTCGGATTC+TGG | - | chr2.1:63791958-63791977 | MS.gene047300:intron | 35.0% |
AAGAAATGAAGGCCGTACTT+TGG | - | chr2.1:63792174-63792193 | MS.gene047300:intron | 40.0% | |
ATGTGTGTACTCATAGGTGT+TGG | - | chr2.1:63789687-63789706 | MS.gene047300:intron | 40.0% | |
CAATCATGATTACAGGGTCA+TGG | - | chr2.1:63791052-63791071 | MS.gene047300:intron | 40.0% | |
CAGAGAAGAACTTCTTGCAA+CGG | - | chr2.1:63791765-63791784 | MS.gene047300:intron | 40.0% | |
CAGTTCCTCTAATGCTTTCT+TGG | + | chr2.1:63789163-63789182 | None:intergenic | 40.0% | |
CTCTTGCATCTTCAGATACA+CGG | + | chr2.1:63793157-63793176 | None:intergenic | 40.0% | |
CTGTCAATGACAAAAGGACT+AGG | + | chr2.1:63792108-63792127 | None:intergenic | 40.0% | |
GCATGAACACGTCATATTTC+CGG | + | chr2.1:63792570-63792589 | None:intergenic | 40.0% | |
GGATCCCATGAAAATTGACA+GGG | - | chr2.1:63793248-63793267 | MS.gene047300:intron | 40.0% | |
GTCATTGACAGATTCTCCAA+AGG | - | chr2.1:63792117-63792136 | MS.gene047300:intron | 40.0% | |
GTTCATGCGCTTTCATACTA+AGG | - | chr2.1:63792582-63792601 | MS.gene047300:intron | 40.0% | |
TAAAAAGAAACGGAGGGAGT+AGG | + | chr2.1:63789536-63789517 | None:intergenic | 40.0% | |
TAAGTCAAAATCAGGGCACA+CGG | + | chr2.1:63790985-63791004 | None:intergenic | 40.0% | |
TAATGACAATGACACTGAGG+AGG | - | chr2.1:63792285-63792304 | MS.gene047300:intron | 40.0% | |
TCAGCATCATCGTCATATTC+AGG | + | chr2.1:63792241-63792260 | None:intergenic | 40.0% | |
TCCTCTAATGCTTTCTTGGA+TGG | + | chr2.1:63789159-63789178 | None:intergenic | 40.0% | |
TCTCTCGATCAAGACATCAA+AGG | + | chr2.1:63791105-63791124 | None:intergenic | 40.0% | |
TCTGGAGACATCAATGCATT+CGG | + | chr2.1:63792914-63792933 | None:intergenic | 40.0% | |
TGATGTCTTGATCGAGAGAA+AGG | - | chr2.1:63791106-63791125 | MS.gene047300:intron | 40.0% | |
TGGATCCCATGAAAATTGAC+AGG | - | chr2.1:63793247-63793266 | MS.gene047300:intron | 40.0% | |
TGGTTATAACCCGAAAAGAC+AGG | - | chr2.1:63792207-63792226 | MS.gene047300:intron | 40.0% | |
TTGACAGATTCTCCAAAGGA+CGG | - | chr2.1:63792121-63792140 | MS.gene047300:intron | 40.0% | |
! | ACACTTGATACGGATTACTC+CGG | + | chr2.1:63790961-63790980 | None:intergenic | 40.0% |
! | AGAGACTAAGGTTTGAGACA+TGG | - | chr2.1:63792666-63792685 | MS.gene047300:intron | 40.0% |
! | GATCGAATTCCTGTCTTTTC+GGG | + | chr2.1:63792219-63792238 | None:intergenic | 40.0% |
! | GGATCGAATTCCTGTCTTTT+CGG | + | chr2.1:63792220-63792239 | None:intergenic | 40.0% |
! | GTCGGCTGTAATTTTCTATC+AGG | - | chr2.1:63793095-63793114 | MS.gene047300:intron | 40.0% |
! | TAAAATGCACACCTTTTCCC+CGG | + | chr2.1:63792041-63792060 | None:intergenic | 40.0% |
! | TAAGAACAAAGAGGCATGCA+TGG | - | chr2.1:63791575-63791594 | MS.gene047300:intron | 40.0% |
! | TGTGTTGAGTGCTTTTCTGT+TGG | - | chr2.1:63791005-63791024 | MS.gene047300:intron | 40.0% |
!! | AAAAGGCATCCAATAAAGGC+CGG | - | chr2.1:63792019-63792038 | MS.gene047300:intron | 40.0% |
!! | ACCATCCAAGAAAGCATTAG+AGG | - | chr2.1:63789155-63789174 | MS.gene047300:CDS | 40.0% |
!! | ATTTTGAGTGTGGATGACTC+AGG | + | chr2.1:63792388-63792407 | None:intergenic | 40.0% |
!! | CAGTTCTGAGCAATTCATCA+TGG | + | chr2.1:63792612-63792631 | None:intergenic | 40.0% |
!!! | TCTTTTCGGGTTATAACCAC+TGG | + | chr2.1:63792206-63792225 | None:intergenic | 40.0% |
AACTTCTTGCAACGGCGAAA+GGG | - | chr2.1:63791773-63791792 | MS.gene047300:intron | 45.0% | |
AAGCCTATCATACCGGAAGA+GGG | + | chr2.1:63791638-63791657 | None:intergenic | 45.0% | |
AAGGAGCAGGTGAAGCAAAA+TGG | - | chr2.1:63790898-63790917 | MS.gene047300:CDS | 45.0% | |
AGGACATGTCTCATGCTGTT+GGG | - | chr2.1:63791737-63791756 | MS.gene047300:intron | 45.0% | |
AGGAGCAGGTGAAGCAAAAT+GGG | - | chr2.1:63790899-63790918 | MS.gene047300:CDS | 45.0% | |
AGTACGGCCTTCATTTCTTG+AGG | + | chr2.1:63792173-63792192 | None:intergenic | 45.0% | |
CAACGCGGAAAGTTACACAT+AGG | + | chr2.1:63790652-63790671 | None:intergenic | 45.0% | |
CGTGTATCTGAAGATGCAAG+AGG | - | chr2.1:63793155-63793174 | MS.gene047300:intron | 45.0% | |
CTATGTGTAACTTTCCGCGT+TGG | - | chr2.1:63790650-63790669 | MS.gene047300:CDS | 45.0% | |
CTGTCGGTACAAATGATTGC+TGG | - | chr2.1:63793180-63793199 | MS.gene047300:intron | 45.0% | |
GCGCGTTTCTTCACTTTGTT+TGG | - | chr2.1:63790689-63790708 | MS.gene047300:intron | 45.0% | |
GGATTTAACACCCGAGGAAA+AGG | - | chr2.1:63792537-63792556 | MS.gene047300:intron | 45.0% | |
GGGAATTGAAATGTATGGCC+TGG | - | chr2.1:63791518-63791537 | MS.gene047300:CDS | 45.0% | |
TAGGACATGTCTCATGCTGT+TGG | - | chr2.1:63791736-63791755 | MS.gene047300:intron | 45.0% | |
TATCTGCTTCAGCTGAAGTG+CGG | + | chr2.1:63792799-63792818 | None:intergenic | 45.0% | |
TGAGAAGGATTTAACACCCG+AGG | - | chr2.1:63792531-63792550 | MS.gene047300:intron | 45.0% | |
TGCATCTTCAGATACACGGT+TGG | + | chr2.1:63793153-63793172 | None:intergenic | 45.0% | |
! | CAGCAATCATTTGTACCGAC+AGG | + | chr2.1:63793182-63793201 | None:intergenic | 45.0% |
! | CATTTGTTGAACATGTCCGC+AGG | - | chr2.1:63792754-63792773 | MS.gene047300:intron | 45.0% |
! | CTACTTCTGCCCAATTTTCC+AGG | + | chr2.1:63791539-63791558 | None:intergenic | 45.0% |
! | TCTCCAAAGGACGGAGATTT+TGG | - | chr2.1:63792130-63792149 | MS.gene047300:intron | 45.0% |
! | TGCAGCTGGTGCTAACAAAA+AGG | - | chr2.1:63792002-63792021 | MS.gene047300:CDS | 45.0% |
!! | AAAGGCATCCAATAAAGGCC+GGG | - | chr2.1:63792020-63792039 | MS.gene047300:intron | 45.0% |
!! | CACTGGCTTCAACCAAAGTA+CGG | + | chr2.1:63792189-63792208 | None:intergenic | 45.0% |
!!! | ATTTGATTTTTATTAAAATA+AGG | + | chr2.1:63790082-63790101 | None:intergenic | 5.0% |
!!! | TTATTTTAATAAAAATCAAA+TGG | - | chr2.1:63790081-63790100 | MS.gene047300:intron | 5.0% |
ATGTGGTCCCGAACAATCAC+GGG | - | chr2.1:63792885-63792904 | MS.gene047300:intron | 50.0% | |
CATGTGGTCCCGAACAATCA+CGG | - | chr2.1:63792884-63792903 | MS.gene047300:intron | 50.0% | |
CCGAGGAAAAGGCAATATGC+CGG | - | chr2.1:63792548-63792567 | MS.gene047300:intron | 50.0% | |
CCTCCAAAATCTCCGTCCTT+TGG | + | chr2.1:63792136-63792155 | None:intergenic | 50.0% | |
CGTACTTTGGTTGAAGCCAG+TGG | - | chr2.1:63792187-63792206 | MS.gene047300:intron | 50.0% | |
CTTCATCTGCACTCCAGTCT+GGG | + | chr2.1:63791349-63791368 | None:intergenic | 50.0% | |
CTTCCCTCTTCCGGTATGAT+AGG | - | chr2.1:63791632-63791651 | MS.gene047300:intron | 50.0% | |
GAACTTCTTGCAACGGCGAA+AGG | - | chr2.1:63791772-63791791 | MS.gene047300:intron | 50.0% | |
GAAGATGCAAGAGGACCTGT+CGG | - | chr2.1:63793164-63793183 | MS.gene047300:intron | 50.0% | |
GAAGCCTATCATACCGGAAG+AGG | + | chr2.1:63791639-63791658 | None:intergenic | 50.0% | |
GCAGAAGTAGCTGAGCATGT+TGG | - | chr2.1:63791549-63791568 | MS.gene047300:intron | 50.0% | |
GGGCAAGGTGATGACAAGAA+AGG | - | chr2.1:63791793-63791812 | MS.gene047300:intron | 50.0% | |
GTAGGAGTAACGGTGACTAG+TGG | - | chr2.1:63791408-63791427 | MS.gene047300:CDS | 50.0% | |
TCCAATAAAGGCCGGGGAAA+AGG | - | chr2.1:63792027-63792046 | MS.gene047300:intron | 50.0% | |
TCTTCATCTGCACTCCAGTC+TGG | + | chr2.1:63791350-63791369 | None:intergenic | 50.0% | |
TGTGAGATAGGTCAAGGAGC+AGG | - | chr2.1:63790885-63790904 | MS.gene047300:CDS | 50.0% | |
TTCATCTGCACTCCAGTCTG+GGG | + | chr2.1:63791348-63791367 | None:intergenic | 50.0% | |
TTCGGAACCCCGTGATTGTT+CGG | + | chr2.1:63792896-63792915 | None:intergenic | 50.0% | |
TTGACGGCACTTGAAGTAGC+TGG | + | chr2.1:63792962-63792981 | None:intergenic | 50.0% | |
TTGATGTCTCCAGACTCTGC+TGG | - | chr2.1:63792920-63792939 | MS.gene047300:intron | 50.0% | |
! | AAGGCATCCAATAAAGGCCG+GGG | - | chr2.1:63792021-63792040 | MS.gene047300:intron | 50.0% |
! | ACCTTTTCCCCGGCCTTTAT+TGG | + | chr2.1:63792031-63792050 | None:intergenic | 50.0% |
! | CCAAAGGACGGAGATTTTGG+AGG | - | chr2.1:63792133-63792152 | MS.gene047300:intron | 50.0% |
! | CCGGCATATTGCCTTTTCCT+CGG | + | chr2.1:63792551-63792570 | None:intergenic | 50.0% |
! | CGGCATATTGCCTTTTCCTC+GGG | + | chr2.1:63792550-63792569 | None:intergenic | 50.0% |
!! | AAGCTGAAAGAAGTGCTCGC+GGG | - | chr2.1:63792846-63792865 | MS.gene047300:intron | 50.0% |
!! | GAAGCTGAAAGAAGTGCTCG+CGG | - | chr2.1:63792845-63792864 | MS.gene047300:intron | 50.0% |
!! | GGAGGGAGTAGGTATTGACA+CGG | + | chr2.1:63789379-63789398 | None:intergenic | 50.0% |
!! | GGCAAGGGAAAGTACTCATG+TGG | - | chr2.1:63792868-63792887 | MS.gene047300:intron | 50.0% |
AAGTGAAGAAACGCGCGCGA+TGG | + | chr2.1:63790685-63790704 | None:intergenic | 55.0% | |
CATACCGGAAGAGGGAAGAC+CGG | + | chr2.1:63791630-63791649 | None:intergenic | 55.0% | |
CCAGCAGCAATTGCTTCCTG+CGG | + | chr2.1:63792773-63792792 | None:intergenic | 55.0% | |
GGCACACGGCACACTTGATA+CGG | + | chr2.1:63790971-63790990 | None:intergenic | 55.0% | |
GTCTACACACATGCTGCAGC+TGG | - | chr2.1:63791988-63792007 | MS.gene047300:CDS | 55.0% | |
TCGGAACCCCGTGATTGTTC+GGG | + | chr2.1:63792895-63792914 | None:intergenic | 55.0% | |
TGCAGCATGTGTGTAGACCG+AGG | + | chr2.1:63791986-63792005 | None:intergenic | 55.0% | |
TGTGGTCCCGAACAATCACG+GGG | - | chr2.1:63792886-63792905 | MS.gene047300:intron | 55.0% | |
TTCCTCTCATCTCCCCAGAC+TGG | - | chr2.1:63791333-63791352 | MS.gene047300:intron | 55.0% | |
! | GGCTTGATGAAAGAGAGCGC+AGG | - | chr2.1:63792464-63792483 | MS.gene047300:intron | 55.0% |
!! | AGCTGAAAGAAGTGCTCGCG+GGG | - | chr2.1:63792847-63792866 | MS.gene047300:intron | 55.0% |
!! | CTTGAAGTAGCTGGCCTTGC+AGG | + | chr2.1:63792953-63792972 | None:intergenic | 55.0% |
!! | GAATTTGGTGCTGCTGCTCC+AGG | - | chr2.1:63790448-63790467 | MS.gene047300:CDS | 55.0% |
!! | GATGGTGGACAGTTCCAACG+CGG | + | chr2.1:63790667-63790686 | None:intergenic | 55.0% |
AGGGTCGGATTCTGGGTCCT+CGG | - | chr2.1:63791966-63791985 | MS.gene047300:intron | 60.0% | |
CCGCAGGAAGCAATTGCTGC+TGG | - | chr2.1:63792770-63792789 | MS.gene047300:intron | 60.0% | |
CTCCAGTCTGGGGAGATGAG+AGG | + | chr2.1:63791338-63791357 | None:intergenic | 60.0% | |
CTCTCCGGTCTTCCCTCTTC+CGG | - | chr2.1:63791623-63791642 | MS.gene047300:intron | 60.0% | |
CTGCTGGTACCAGACCTGCA+AGG | - | chr2.1:63792936-63792955 | MS.gene047300:intron | 60.0% | |
CTTGCAACGGCGAAAGGGCA+AGG | - | chr2.1:63791778-63791797 | MS.gene047300:intron | 60.0% | |
GGTCTGGTACCAGCAGAGTC+TGG | + | chr2.1:63792932-63792951 | None:intergenic | 60.0% | |
TGAAGAAACGCGCGCGATGG+TGG | + | chr2.1:63790682-63790701 | None:intergenic | 60.0% | |
!! | AAAGAAGTGCTCGCGGGGCA+AGG | - | chr2.1:63792852-63792871 | MS.gene047300:intron | 60.0% |
!! | AAGAAGTGCTCGCGGGGCAA+GGG | - | chr2.1:63792853-63792872 | MS.gene047300:intron | 60.0% |
!! | AGTAGCTGGCCTTGCAGGTC+TGG | + | chr2.1:63792948-63792967 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 63789132 | 63793311 | 63789132 | ID=MS.gene047300 |
chr2.1 | mRNA | 63789132 | 63793311 | 63789132 | ID=MS.gene047300.t1;Parent=MS.gene047300 |
chr2.1 | exon | 63793262 | 63793311 | 63793262 | ID=MS.gene047300.t1.exon1;Parent=MS.gene047300.t1 |
chr2.1 | CDS | 63793262 | 63793311 | 63793262 | ID=cds.MS.gene047300.t1;Parent=MS.gene047300.t1 |
chr2.1 | exon | 63791974 | 63792035 | 63791974 | ID=MS.gene047300.t1.exon2;Parent=MS.gene047300.t1 |
chr2.1 | CDS | 63791974 | 63792035 | 63791974 | ID=cds.MS.gene047300.t1;Parent=MS.gene047300.t1 |
chr2.1 | exon | 63791370 | 63791548 | 63791370 | ID=MS.gene047300.t1.exon3;Parent=MS.gene047300.t1 |
chr2.1 | CDS | 63791370 | 63791548 | 63791370 | ID=cds.MS.gene047300.t1;Parent=MS.gene047300.t1 |
chr2.1 | exon | 63791058 | 63791123 | 63791058 | ID=MS.gene047300.t1.exon4;Parent=MS.gene047300.t1 |
chr2.1 | CDS | 63791058 | 63791123 | 63791058 | ID=cds.MS.gene047300.t1;Parent=MS.gene047300.t1 |
chr2.1 | exon | 63790799 | 63790924 | 63790799 | ID=MS.gene047300.t1.exon5;Parent=MS.gene047300.t1 |
chr2.1 | CDS | 63790799 | 63790924 | 63790799 | ID=cds.MS.gene047300.t1;Parent=MS.gene047300.t1 |
chr2.1 | exon | 63790644 | 63790704 | 63790644 | ID=MS.gene047300.t1.exon6;Parent=MS.gene047300.t1 |
chr2.1 | CDS | 63790644 | 63790704 | 63790644 | ID=cds.MS.gene047300.t1;Parent=MS.gene047300.t1 |
chr2.1 | exon | 63790395 | 63790475 | 63790395 | ID=MS.gene047300.t1.exon7;Parent=MS.gene047300.t1 |
chr2.1 | CDS | 63790395 | 63790475 | 63790395 | ID=cds.MS.gene047300.t1;Parent=MS.gene047300.t1 |
chr2.1 | exon | 63790093 | 63790315 | 63790093 | ID=MS.gene047300.t1.exon8;Parent=MS.gene047300.t1 |
chr2.1 | CDS | 63790093 | 63790315 | 63790093 | ID=cds.MS.gene047300.t1;Parent=MS.gene047300.t1 |
chr2.1 | exon | 63789768 | 63789978 | 63789768 | ID=MS.gene047300.t1.exon9;Parent=MS.gene047300.t1 |
chr2.1 | CDS | 63789768 | 63789978 | 63789768 | ID=cds.MS.gene047300.t1;Parent=MS.gene047300.t1 |
chr2.1 | exon | 63789422 | 63789667 | 63789422 | ID=MS.gene047300.t1.exon10;Parent=MS.gene047300.t1 |
chr2.1 | CDS | 63789422 | 63789667 | 63789422 | ID=cds.MS.gene047300.t1;Parent=MS.gene047300.t1 |
chr2.1 | exon | 63789132 | 63789326 | 63789132 | ID=MS.gene047300.t1.exon11;Parent=MS.gene047300.t1 |
chr2.1 | CDS | 63789132 | 63789326 | 63789132 | ID=cds.MS.gene047300.t1;Parent=MS.gene047300.t1 |
Gene Sequence |
Protein sequence |