AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene048218

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene048218.t1 MTR_2g026310 97.096 551 15 1 1 551 1 550 0.0 1109
MS.gene048218.t1 MTR_2g026380 68.727 534 109 4 19 551 18 494 0.0 729
MS.gene048218.t1 MTR_7g063290 70.709 536 87 6 19 551 18 486 0.0 702
MS.gene048218.t1 MTR_3g082790 52.338 556 227 8 18 549 20 561 0.0 543
MS.gene048218.t1 MTR_3g082790 52.453 530 216 6 42 549 6 521 0.0 528
MS.gene048218.t1 MTR_3g081360 51.977 531 230 7 19 549 5 510 0.0 526
MS.gene048218.t1 MTR_3g081420 72.596 208 56 1 344 551 2 208 1.12e-100 303
MS.gene048218.t1 MTR_3g081380 60.494 162 62 1 19 178 16 177 8.59e-67 215
MS.gene048218.t1 MTR_7g062030 82.500 80 14 0 17 96 30 109 2.61e-36 132
MS.gene048218.t1 MTR_3g081390 65.556 90 31 0 90 179 36 125 2.22e-32 121
MS.gene048218.t1 MTR_3g081410 61.607 112 38 2 377 483 1 112 7.66e-31 117
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene048218.t1 AT4G16420 58.993 556 151 10 1 552 1 483 0.0 634
MS.gene048218.t1 AT4G16420 58.750 560 150 11 1 552 1 487 0.0 629
MS.gene048218.t1 AT4G16420 58.497 559 152 10 1 552 1 486 0.0 628
MS.gene048218.t1 AT3G07740 46.341 574 255 11 1 550 1 545 1.60e-159 466
MS.gene048218.t1 AT3G07740 47.398 538 232 9 35 550 16 524 2.48e-157 460
MS.gene048218.t1 AT3G07740 45.611 581 256 12 1 550 1 552 7.95e-157 459
MS.gene048218.t1 AT3G07740 47.211 502 215 8 70 550 2 474 8.35e-143 421

Find 136 sgRNAs with CRISPR-Local

Find 297 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCATTTCTTGAGGAATT+TGG 0.167298 2.3:+62992981 None:intergenic
TCTCCAATGGACAGAGATTT+TGG 0.183129 2.3:-62993014 MS.gene048218:CDS
TATATTGTAGGGTCAGATTC+TGG 0.192149 2.3:-62993254 MS.gene048218:intron
ACTCGCCGAAATGGAGTTTA+AGG 0.210601 2.3:-62992877 MS.gene048218:CDS
AAATGTATGGCATGGGAAAC+TGG 0.255134 2.3:-62994165 MS.gene048218:CDS
TTGACTTCCAATATGAATTC+AGG 0.266313 2.3:-62993355 MS.gene048218:intron
AAATCCTTCTCAAATGGATT+TGG 0.279560 2.3:+62992611 None:intergenic
GCATGAAAATGTCATATTTC+CGG 0.288775 2.3:+62992564 None:intergenic
TCAATACATAAGTCAAAATC+TGG 0.298397 2.3:+62994943 None:intergenic
TCAGCATCATTATCATATTC+AGG 0.301408 2.3:+62992906 None:intergenic
GAAAAGAATTCAAGAGCTTA+AGG 0.302238 2.3:-62992477 MS.gene048218:intron
AACCAAAAGGCATCCAATAA+AGG 0.306706 2.3:-62993197 MS.gene048218:CDS
TGCTGCGCATTTATTCAAAA+AGG 0.307711 2.3:-62992815 MS.gene048218:intron
AAGAAATGAAGGCCCTTCTT+TGG 0.309899 2.3:-62992970 MS.gene048218:CDS
GCCCTTTATTGGATGCCTTT+TGG 0.311044 2.3:+62993195 None:intergenic
ACAAAAGCAATCATTCTTAC+AGG 0.313342 2.3:-62994888 MS.gene048218:CDS
CTCCCCATTCTTCCCTCTTC+CGG 0.320608 2.3:-62994068 MS.gene048218:intron
TTTGGAACCCCGTGATTGTT+CGG 0.334438 2.3:+62992236 None:intergenic
TGGTCCTGGAATCGTTAAAA+TGG 0.342625 2.3:-62993162 MS.gene048218:CDS
TCCCTCTCATTTGCCCAGAC+TGG 0.349166 2.3:-62994360 MS.gene048218:CDS
TCTGGAGACATTAATGCATT+TGG 0.356050 2.3:+62992218 None:intergenic
TCATCATCTGCATTCCAGTC+TGG 0.356882 2.3:+62994346 None:intergenic
TTGGAACCCCGTGATTGTTC+GGG 0.365263 2.3:+62992237 None:intergenic
TAGCTTACCTGAATTCATAT+TGG 0.383727 2.3:+62993348 None:intergenic
ATGCTCATTAAGAAGGGAAT+TGG 0.386721 2.3:-62991851 MS.gene048218:CDS
ATGGATGCAACTGGATACTA+TGG 0.389391 2.3:-62992152 MS.gene048218:CDS
CTCTTGCATCTTCAGATAAA+CGG 0.389633 2.3:+62991976 None:intergenic
GTCAAGTTCTGTCAATGAAA+TGG 0.399893 2.3:-62992171 MS.gene048218:CDS
GGTGTTAAATCCTTCTCAAA+TGG 0.404781 2.3:+62992605 None:intergenic
AGTGGAGATAATTCAGAATC+TGG 0.407331 2.3:-62996010 MS.gene048218:CDS
TACTGTAATAAAGATATTAC+AGG 0.419202 2.3:-62994994 MS.gene048218:CDS
TAGGACATGTCTCATGTTGT+TGG 0.423324 2.3:-62993958 MS.gene048218:CDS
ATGGAAGATTCCAACAAATC+TGG 0.423508 2.3:-62993391 MS.gene048218:CDS
AATTCAGAATCTGGAGTTGC+AGG 0.426709 2.3:-62996001 MS.gene048218:intron
GCCAGTGGAACCAGATTTGT+TGG 0.430345 2.3:+62993381 None:intergenic
AGAACTTGACCCTGCAGGTC+TGG 0.440690 2.3:+62992184 None:intergenic
AACGTTTGTGCTGCGAGTTA+AGG 0.442285 2.3:-62992009 MS.gene048218:CDS
ATATTGTAGGGTCAGATTCT+GGG 0.444203 2.3:-62993253 MS.gene048218:intron
TTTCATGCGCTTTCATACTA+AGG 0.444303 2.3:-62992549 MS.gene048218:CDS
AAGCATGCATAGAACACTAT+AGG 0.446368 2.3:-62994105 MS.gene048218:CDS
GTCAATGAAATGGATGCAAC+TGG 0.450262 2.3:-62992161 MS.gene048218:CDS
CATCATCTGCATTCCAGTCT+GGG 0.453025 2.3:+62994347 None:intergenic
GGTCTGGTACCAGCAGAGTC+TGG 0.454618 2.3:+62992200 None:intergenic
ATACCGGAAGAGGGAAGAAT+GGG 0.457070 2.3:+62994065 None:intergenic
CTATCTGTACAAATGATTGC+TGG 0.459357 2.3:-62991950 MS.gene048218:CDS
CTTGACTCTAGACGGAGAAA+AGG 0.460413 2.3:+62993493 None:intergenic
AATCTGAAGAAAGTGCTTGT+AGG 0.463870 2.3:-62992283 MS.gene048218:CDS
AGTGTCCTTAAACTCCATTT+CGG 0.467485 2.3:+62992872 None:intergenic
ACCAAAAGGCATCCAATAAA+GGG 0.468979 2.3:-62993196 MS.gene048218:CDS
TCTTGCCATGGCGAAAGGGC+AGG 0.472164 2.3:-62993917 MS.gene048218:CDS
ATGTGGTCCCGAACAATCAC+GGG 0.473554 2.3:-62992244 MS.gene048218:CDS
CCTCCAAAATCTCTGTCCAT+TGG 0.475110 2.3:+62993011 None:intergenic
TGGATACCATCAAAATTGAC+AGG 0.484436 2.3:-62991883 MS.gene048218:CDS
TGTGAGTCAGGTCAAGGAGC+AGG 0.487841 2.3:-62995048 MS.gene048218:intron
CATACCGGAAGAGGGAAGAA+TGG 0.490757 2.3:+62994064 None:intergenic
AGGACATGTCTCATGTTGTT+GGG 0.493324 2.3:-62993957 MS.gene048218:CDS
CAGCAATCATTTGTACAGAT+AGG 0.493329 2.3:+62991951 None:intergenic
TGCAGCTAGTGCTAACCAAA+AGG 0.494192 2.3:-62993210 MS.gene048218:CDS
AAGGAGCAGGTGAAGCGAAA+AGG 0.494331 2.3:-62995035 MS.gene048218:CDS
TCGCAGGAAGCTCGTGCTGC+TGG 0.496946 2.3:-62992359 MS.gene048218:intron
AACTTCTTGCCATGGCGAAA+GGG 0.496960 2.3:-62993921 MS.gene048218:CDS
GTATGATATGCTCATTAAGA+AGG 0.500449 2.3:-62991858 MS.gene048218:CDS
AGTCGAAGCAGATAGATATC+TGG 0.502448 2.3:-62992324 MS.gene048218:CDS
TGGTTATAACGCGAAAAGAC+AGG 0.504452 2.3:-62992937 MS.gene048218:CDS
GGCACATGGCACACTTGATA+CGG 0.505024 2.3:+62994965 None:intergenic
CCACTGATTTCAACCAAAGA+AGG 0.505240 2.3:+62992957 None:intergenic
TGAGCAATTACTCGCCGAAA+TGG 0.506718 2.3:-62992886 MS.gene048218:CDS
CCAAATTCCTCAAGAAATGA+AGG 0.508733 2.3:-62992981 MS.gene048218:CDS
AAAGCCTGACATACCGGAAG+AGG 0.510365 2.3:+62994055 None:intergenic
AGGAGCAGGTGAAGCGAAAA+GGG 0.511931 2.3:-62995034 MS.gene048218:CDS
TCCAACAAATCTGGTTCCAC+TGG 0.512061 2.3:-62993382 MS.gene048218:CDS
AAAGGCATCCAATAAAGGGC+GGG 0.512200 2.3:-62993192 MS.gene048218:CDS
ATCTGAAGAAAGTGCTTGTA+GGG 0.514608 2.3:-62992282 MS.gene048218:CDS
GAACTTCTTGCCATGGCGAA+AGG 0.516288 2.3:-62993922 MS.gene048218:CDS
ATCTTCAGATAAACGGTTGG+AGG 0.520579 2.3:+62991983 None:intergenic
TTGACTCTAGACGGAGAAAA+GGG 0.520682 2.3:+62993494 None:intergenic
GGGAATAGAAATGTATGGCA+TGG 0.523916 2.3:-62994173 MS.gene048218:CDS
AGTCCTATGTTCAGAGATAA+CGG 0.524266 2.3:+62992502 None:intergenic
CTCACCCTGCCCTTTCGCCA+TGG 0.527521 2.3:+62993912 None:intergenic
TTGACAGAACTTGACCCTGC+AGG 0.529299 2.3:+62992179 None:intergenic
CTTGCCATGGCGAAAGGGCA+GGG 0.537534 2.3:-62993916 MS.gene048218:CDS
AGAAGGGCCTTCATTTCTTG+AGG 0.537872 2.3:+62992974 None:intergenic
TCTGCTGGTACCAGACCTGC+AGG 0.542235 2.3:-62992194 MS.gene048218:CDS
AATTCATATTGGAAGTCAAA+CGG 0.543137 2.3:+62993359 None:intergenic
GGAATAGAAATGTATGGCAT+GGG 0.547477 2.3:-62994172 MS.gene048218:CDS
TGCATCTTCAGATAAACGGT+TGG 0.547701 2.3:+62991980 None:intergenic
CCTTCTTTGGTTGAAATCAG+TGG 0.553653 2.3:-62992957 MS.gene048218:CDS
TTAATGTCTCCAGACTCTGC+TGG 0.560448 2.3:-62992209 MS.gene048218:CDS
AATGTATGGCATGGGAAACT+GGG 0.562064 2.3:-62994164 MS.gene048218:CDS
TTATCCAAATCCATTTGAGA+AGG 0.565094 2.3:-62992615 MS.gene048218:CDS
CATGTGGTCCCGAACAATCA+CGG 0.569260 2.3:-62992245 MS.gene048218:CDS
TCATCAAATGTTCAAGAATG+TGG 0.572296 2.3:-62991903 MS.gene048218:CDS
GCAGCATGTGTGTTGACTGA+GGG 0.575476 2.3:+62993230 None:intergenic
AACTCAATGGGTCGTTCTCG+TGG 0.576749 2.3:-62996246 None:intergenic
CAATCATTCTTACAGGGTCA+TGG 0.577318 2.3:-62994881 MS.gene048218:intron
CATGGCGAAAGGGCAGGGTG+AGG 0.578638 2.3:-62993911 MS.gene048218:CDS
TCCAGTCTGGGCAAATGAGA+GGG 0.584062 2.3:+62994359 None:intergenic
AAGGCATCCAATAAAGGGCG+GGG 0.585408 2.3:-62993191 MS.gene048218:CDS
GTCATTGACAGATTCTCCAA+TGG 0.586027 2.3:-62993027 MS.gene048218:intron
AGAAAGAAGAATGCTGCAAG+TGG 0.586362 2.3:-62996028 MS.gene048218:CDS
GATTGTAACAGGACTTCCCA+TGG 0.586370 2.3:-62993543 MS.gene048218:intron
CCTGGAATCGTTAAAATGGA+AGG 0.586848 2.3:-62993158 MS.gene048218:intron
CAGCCTTACTTGACTCTAGA+CGG 0.586974 2.3:+62993485 None:intergenic
TTCCAGTCTGGGCAAATGAG+AGG 0.590859 2.3:+62994358 None:intergenic
TATGATATGCTCATTAAGAA+GGG 0.593230 2.3:-62991857 MS.gene048218:CDS
AGGCATCCAATAAAGGGCGG+GGG 0.596003 2.3:-62993190 MS.gene048218:CDS
CCGAGGAAAAGTCAATATGC+CGG 0.597275 2.3:-62992583 MS.gene048218:CDS
CACTGATTTCAACCAAAGAA+GGG 0.597471 2.3:+62992958 None:intergenic
CAGAAAAGAACTTCTTGCCA+TGG 0.598444 2.3:-62993929 MS.gene048218:CDS
CAATACATAAGTCAAAATCT+GGG 0.604695 2.3:+62994944 None:intergenic
GGGCAGGGTGAGGACAAGAA+AGG 0.604928 2.3:-62993901 MS.gene048218:intron
TCTGGCGCATAAGAGAAGAA+AGG 0.605068 2.3:-62992306 MS.gene048218:CDS
GCAGAAGTTGCTGAGCATGT+TGG 0.605076 2.3:-62994142 MS.gene048218:CDS
GAACCGTTATCTCTGAACAT+AGG 0.607443 2.3:-62992505 MS.gene048218:CDS
TGCAGCATGTGTGTTGACTG+AGG 0.608763 2.3:+62993229 None:intergenic
ATTGGAAGTCAAACGGCCAG+TGG 0.615296 2.3:+62993366 None:intergenic
ATTGTAACAGGACTTCCCAT+GGG 0.616899 2.3:-62993542 MS.gene048218:intron
GGCGAGAGAAAGTGCTCATG+TGG 0.619340 2.3:-62992261 MS.gene048218:CDS
TAAGTCAAAATCTGGGCACA+TGG 0.621677 2.3:+62994951 None:intergenic
AAGCCTGACATACCGGAAGA+GGG 0.625173 2.3:+62994056 None:intergenic
CAAAAGCAATCATTCTTACA+GGG 0.631809 2.3:-62994887 MS.gene048218:CDS
TGAGAAGGATTTAACACCCG+AGG 0.635433 2.3:-62992600 MS.gene048218:CDS
CGTTTATCTGAAGATGCAAG+AGG 0.641805 2.3:-62991975 MS.gene048218:CDS
AAAAGGCATCCAATAAAGGG+CGG 0.652819 2.3:-62993193 MS.gene048218:CDS
GTTTAAGGACACTGACACTG+AGG 0.653964 2.3:-62992862 MS.gene048218:CDS
TAAGGACACTGACACTGAGG+AGG 0.663510 2.3:-62992859 MS.gene048218:CDS
TGATGAAAGAAAGCGCAGGA+AGG 0.670308 2.3:-62992663 MS.gene048218:CDS
ACGATGATGATCCAAGCCAA+AGG 0.670643 2.3:-62996209 MS.gene048218:intron
TATCTGCTTCGACTGAACTG+CGG 0.688250 2.3:+62992333 None:intergenic
TACCGGAAGAGGGAAGAATG+GGG 0.689965 2.3:+62994066 None:intergenic
GGCTTGATGAAAGAAAGCGC+AGG 0.689974 2.3:-62992667 MS.gene048218:CDS
TTGTAACAGGACTTCCCATG+GGG 0.692077 2.3:-62993541 MS.gene048218:intron
CTGCTGGTACCAGACCTGCA+GGG 0.707483 2.3:-62992193 MS.gene048218:CDS
GGATACCATCAAAATTGACA+GGG 0.710009 2.3:-62991882 MS.gene048218:CDS
TGTAACAGGACTTCCCATGG+GGG 0.750222 2.3:-62993540 MS.gene048218:intron
TGTGGTCCCGAACAATCACG+GGG 0.753110 2.3:-62992243 MS.gene048218:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATAAATAATATTTAAAGA+TGG + chr2.3:62992338-62992357 None:intergenic 10.0%
!! ATTATAATAATAAGAAAAGA+TGG + chr2.3:62991911-62991930 None:intergenic 10.0%
!! TATATTGTTTATATATTGTA+GGG - chr2.3:62994816-62994835 MS.gene048218:intron 10.0%
!!! CTTTTCTTATTATTATAATT+GGG - chr2.3:62991912-62991931 MS.gene048218:CDS 10.0%
!!! TCTTTTCTTATTATTATAAT+TGG - chr2.3:62991911-62991930 MS.gene048218:CDS 10.0%
!! ATTGAAAGGAAATTATAATT+GGG + chr2.3:62994793-62994812 None:intergenic 15.0%
!! CTATATTGTTTATATATTGT+AGG - chr2.3:62994815-62994834 MS.gene048218:intron 15.0%
!! GAAAAATATAAACTTTAACT+TGG + chr2.3:62992316-62992335 None:intergenic 15.0%
!! TATCATATTCGTTTATATAA+AGG - chr2.3:62994071-62994090 MS.gene048218:CDS 15.0%
!! TATTATAATCTATGATTCTA+TGG - chr2.3:62994418-62994437 MS.gene048218:intron 15.0%
!!! AAGTTTTTCAATTTAAAGAT+AGG + chr2.3:62995390-62995409 None:intergenic 15.0%
!!! ATATGATAAAGCATTATATT+TGG - chr2.3:62993825-62993844 MS.gene048218:intron 15.0%
!!! TCTATATCAGTTTTTTAATA+CGG - chr2.3:62993671-62993690 MS.gene048218:intron 15.0%
!! ACATTCTTCTTTATAAATAC+TGG - chr2.3:62994507-62994526 MS.gene048218:intron 20.0%
!! ACTAAAGTTAAAGACTTATA+TGG + chr2.3:62992464-62992483 None:intergenic 20.0%
!! AGAAACCTATAAAACTAAAA+TGG + chr2.3:62995299-62995318 None:intergenic 20.0%
!! AGGCATTATTATTTATTGTT+TGG + chr2.3:62994351-62994370 None:intergenic 20.0%
!! CATTCTTCTTTATAAATACT+GGG - chr2.3:62994508-62994527 MS.gene048218:intron 20.0%
!! CTCAAAATCATAAACAATAA+TGG - chr2.3:62995337-62995356 MS.gene048218:intron 20.0%
!! GATTGAAAGGAAATTATAAT+TGG + chr2.3:62994794-62994813 None:intergenic 20.0%
!! TAAACAATATAGAGATTGAA+AGG + chr2.3:62994807-62994826 None:intergenic 20.0%
!! TACTGTAATAAAGATATTAC+AGG - chr2.3:62993087-62993106 MS.gene048218:intron 20.0%
!! TAGATGACAATGTAATTTAA+GGG + chr2.3:62992781-62992800 None:intergenic 20.0%
!! TATCTATAAGAGAAACTATT+TGG - chr2.3:62993514-62993533 MS.gene048218:CDS 20.0%
!! TATGTTTAATAAGACATCAA+AGG + chr2.3:62993253-62993272 None:intergenic 20.0%
!! TTTAAATTGAAAAACTTTGC+AGG - chr2.3:62995393-62995412 MS.gene048218:intron 20.0%
!!! AACAACCATTTTAGTTTTAT+AGG - chr2.3:62995291-62995310 MS.gene048218:intron 20.0%
!!! AATATAAACTTTAACTTGGA+TGG + chr2.3:62992312-62992331 None:intergenic 20.0%
!!! ATGTTTGATAATAATTTTCC+TGG - chr2.3:62993005-62993024 MS.gene048218:CDS 20.0%
! AACTATTTGGAAAGATTTAG+AGG - chr2.3:62993527-62993546 MS.gene048218:CDS 25.0%
! AATGTAATTTAAGGGATGTT+TGG + chr2.3:62992773-62992792 None:intergenic 25.0%
! AATTCATATTGGAAGTCAAA+CGG + chr2.3:62994725-62994744 None:intergenic 25.0%
! AGGAAAACATTTGAAAGTAA+TGG + chr2.3:62993233-62993252 None:intergenic 25.0%
! ATACAATTAACCAAGTACAA+TGG + chr2.3:62992127-62992146 None:intergenic 25.0%
! ATAGATATAGTAAAATGCTG+TGG - chr2.3:62991986-62992005 MS.gene048218:CDS 25.0%
! ATAGCATACTGTTATAAATC+AGG - chr2.3:62994272-62994291 MS.gene048218:intron 25.0%
! CAATACATAAGTCAAAATCT+GGG + chr2.3:62993140-62993159 None:intergenic 25.0%
! GAATGTCGATAAGAATTTAA+TGG + chr2.3:62995645-62995664 None:intergenic 25.0%
! GTAGATGACAATGTAATTTA+AGG + chr2.3:62992782-62992801 None:intergenic 25.0%
! GTTCTATCATAAACCATATT+TGG + chr2.3:62993567-62993586 None:intergenic 25.0%
! TATGATATGCTCATTAAGAA+GGG - chr2.3:62996224-62996243 MS.gene048218:CDS 25.0%
! TCAATACATAAGTCAAAATC+TGG + chr2.3:62993141-62993160 None:intergenic 25.0%
! TGGATAAAAAATCAAACCTT+TGG + chr2.3:62991891-62991910 None:intergenic 25.0%
! TGGTTTATGATAGAACATTA+TGG - chr2.3:62993571-62993590 MS.gene048218:intron 25.0%
! TTGGTTTAAATTAATTGCCT+AGG - chr2.3:62993778-62993797 MS.gene048218:intron 25.0%
! TTTCATTCTTTAGCGAAAAA+TGG + chr2.3:62992907-62992926 None:intergenic 25.0%
! TTTCCAAGTAGAGAAAAAAA+GGG + chr2.3:62995667-62995686 None:intergenic 25.0%
!! TAATGCAATTTTCATAACAG+CGG + chr2.3:62993450-62993469 None:intergenic 25.0%
!! TTTTCCAAGTAGAGAAAAAA+AGG + chr2.3:62995668-62995687 None:intergenic 25.0%
!!! AGCAACAAATTTTTGGTTTT+AGG - chr2.3:62993887-62993906 MS.gene048218:intron 25.0%
!!! ATTAGTTTCTGTAGTTTTTG+GGG - chr2.3:62994230-62994249 MS.gene048218:intron 25.0%
!!! ATTGTTTATGATTTTGAGTG+TGG + chr2.3:62995335-62995354 None:intergenic 25.0%
!!! CATTAGTTTCTGTAGTTTTT+GGG - chr2.3:62994229-62994248 MS.gene048218:intron 25.0%
!!! CTTTTCTAGCAACAAATTTT+TGG - chr2.3:62993880-62993899 MS.gene048218:intron 25.0%
!!! GCAACAAATTTTTGGTTTTA+GGG - chr2.3:62993888-62993907 MS.gene048218:intron 25.0%
!!! TCATTAGTTTCTGTAGTTTT+TGG - chr2.3:62994228-62994247 MS.gene048218:intron 25.0%
!!! TTCTAAATGTTGATTCAGAA+TGG - chr2.3:62994671-62994690 MS.gene048218:intron 25.0%
!!! TTTTAGGGAATAGAAATGTA+TGG - chr2.3:62993903-62993922 MS.gene048218:CDS 25.0%
AAAAAATCAAACCTTTGGCT+TGG + chr2.3:62991886-62991905 None:intergenic 30.0%
ACAAAAGCAATCATTCTTAC+AGG - chr2.3:62993193-62993212 MS.gene048218:CDS 30.0%
AGCAATGATAACAACAATGT+CGG + chr2.3:62993485-62993504 None:intergenic 30.0%
AGCATTGTGTAATGTCAATT+GGG + chr2.3:62994975-62994994 None:intergenic 30.0%
AGTTATCAGCAACATAAATG+AGG + chr2.3:62994371-62994390 None:intergenic 30.0%
ATCACTCTGAGTTTAATTAC+AGG - chr2.3:62993328-62993347 MS.gene048218:intron 30.0%
CAAAAGCAATCATTCTTACA+GGG - chr2.3:62993194-62993213 MS.gene048218:CDS 30.0%
CATCAACTTATTCAGTCATA+CGG + chr2.3:62992830-62992849 None:intergenic 30.0%
CATGTCCTAGTAAATAAGAA+TGG + chr2.3:62994112-62994131 None:intergenic 30.0%
CATTTAGAAGTCAATCAACA+TGG + chr2.3:62994660-62994679 None:intergenic 30.0%
GAAAAGAATTCAAGAGCTTA+AGG - chr2.3:62995604-62995623 MS.gene048218:intron 30.0%
GATTTCTAAGCTACAAATTG+TGG + chr2.3:62992530-62992549 None:intergenic 30.0%
GCATGAAAATGTCATATTTC+CGG + chr2.3:62995520-62995539 None:intergenic 30.0%
GTATGATATGCTCATTAAGA+AGG - chr2.3:62996223-62996242 MS.gene048218:CDS 30.0%
TAACCTTTCGATTGATCAAA+AGG + chr2.3:62993277-62993296 None:intergenic 30.0%
TAGCTTACCTGAATTCATAT+TGG + chr2.3:62994736-62994755 None:intergenic 30.0%
TATTCAAACAAACACTCCAT+CGG + chr2.3:62992873-62992892 None:intergenic 30.0%
TCAGCATCATTATCATATTC+AGG + chr2.3:62995178-62995197 None:intergenic 30.0%
TCATCAAATGTTCAAGAATG+TGG - chr2.3:62996178-62996197 MS.gene048218:intron 30.0%
TTATCCAAATCCATTTGAGA+AGG - chr2.3:62995466-62995485 MS.gene048218:intron 30.0%
TTGACTTCCAATATGAATTC+AGG - chr2.3:62994726-62994745 MS.gene048218:intron 30.0%
! AAATCCTTCTCAAATGGATT+TGG + chr2.3:62995473-62995492 None:intergenic 30.0%
! AATCAACATGGTATTGAACA+TGG + chr2.3:62994648-62994667 None:intergenic 30.0%
! GTCTCATTTATCACTTCTTT+TGG - chr2.3:62994298-62994317 MS.gene048218:intron 30.0%
! TAACCTTTTGATCAATCGAA+AGG - chr2.3:62993271-62993290 MS.gene048218:intron 30.0%
! TGATGAAATTTTGCTTCTAG+AGG - chr2.3:62993752-62993771 MS.gene048218:intron 30.0%
!! ATACAGTTGAAAGCATCATA+TGG + chr2.3:62992020-62992039 None:intergenic 30.0%
!! ATGACTGAATAAGTTGATGT+TGG - chr2.3:62992831-62992850 MS.gene048218:CDS 30.0%
!! GAAGGTGTGCATTTTATATT+TGG - chr2.3:62994941-62994960 MS.gene048218:CDS 30.0%
!! GTAAGAATGATTGCTTTTGT+GGG + chr2.3:62993193-62993212 None:intergenic 30.0%
!! TAAGAATGATTGCTTTTGTG+GGG + chr2.3:62993192-62993211 None:intergenic 30.0%
!! TGTAAGAATGATTGCTTTTG+TGG + chr2.3:62993194-62993213 None:intergenic 30.0%
!!! ACAGTTTTAGAATGCAAACT+TGG + chr2.3:62995997-62996016 None:intergenic 30.0%
!!! ATTCCCTTTTTTTCTCTACT+TGG - chr2.3:62995661-62995680 MS.gene048218:intron 30.0%
!!! ATTTCGTTTTCTGAAACCAT+CGG - chr2.3:62996029-62996048 MS.gene048218:CDS 30.0%
!!! TGATTGGTTGGTTTTTGTTT+TGG - chr2.3:62994456-62994475 MS.gene048218:intron 30.0%
AAAATCGATGAATGCAAAGG+TGG + chr2.3:62992385-62992404 None:intergenic 35.0%
AAGCATGCATAGAACACTAT+AGG - chr2.3:62993976-62993995 MS.gene048218:intron 35.0%
AATTAATTGCCTAGGAGTAG+CGG - chr2.3:62993786-62993805 MS.gene048218:intron 35.0%
AGAAACTGTAACCGTATGTT+TGG - chr2.3:62992720-62992739 MS.gene048218:intron 35.0%
AGACAAATTATCCTGACAAC+AGG + chr2.3:62993700-62993719 None:intergenic 35.0%
AGATTTAGAGGTTAACGAGT+TGG - chr2.3:62993539-62993558 MS.gene048218:intron 35.0%
AGTCCTATGTTCAGAGATAA+CGG + chr2.3:62995582-62995601 None:intergenic 35.0%
AGTGGAGATAATTCAGAATC+TGG - chr2.3:62992071-62992090 MS.gene048218:intron 35.0%
AGTGTCCTTAAACTCCATTT+CGG + chr2.3:62995212-62995231 None:intergenic 35.0%
ATATTGTAGGGTCAGATTCT+GGG - chr2.3:62994828-62994847 MS.gene048218:intron 35.0%
ATCGAAGTGTAGGTTTGAAA+CGG - chr2.3:62992743-62992762 MS.gene048218:intron 35.0%
ATGCTCATTAAGAAGGGAAT+TGG - chr2.3:62996230-62996249 MS.gene048218:CDS 35.0%
ATGCTTTCAACTGTATGTGT+AGG - chr2.3:62992024-62992043 MS.gene048218:intron 35.0%
ATGGAAGATTCCAACAAATC+TGG - chr2.3:62994690-62994709 MS.gene048218:intron 35.0%
CACAAAATCGATGAATGCAA+AGG + chr2.3:62992388-62992407 None:intergenic 35.0%
CAGCAATCATTTGTACAGAT+AGG + chr2.3:62996133-62996152 None:intergenic 35.0%
CAGCATTGTGTAATGTCAAT+TGG + chr2.3:62994976-62994995 None:intergenic 35.0%
CCAAATTCCTCAAGAAATGA+AGG - chr2.3:62995100-62995119 MS.gene048218:intron 35.0%
CCTTCATTTCTTGAGGAATT+TGG + chr2.3:62995103-62995122 None:intergenic 35.0%
CTATCATGTACCATTGTACT+TGG - chr2.3:62992114-62992133 MS.gene048218:intron 35.0%
CTATCTGTACAAATGATTGC+TGG - chr2.3:62996131-62996150 MS.gene048218:intron 35.0%
CTCTTGCATCTTCAGATAAA+CGG + chr2.3:62996108-62996127 None:intergenic 35.0%
CTGTCAATGACAAAAGAACT+AGG + chr2.3:62995045-62995064 None:intergenic 35.0%
GACAAATTATCCTGACAACA+GGG + chr2.3:62993699-62993718 None:intergenic 35.0%
GGAATAGAAATGTATGGCAT+GGG - chr2.3:62993909-62993928 MS.gene048218:CDS 35.0%
GGATACCATCAAAATTGACA+GGG - chr2.3:62996199-62996218 MS.gene048218:intron 35.0%
GGTGTTAAATCCTTCTCAAA+TGG + chr2.3:62995479-62995498 None:intergenic 35.0%
GTCAAGTTCTGTCAATGAAA+TGG - chr2.3:62995910-62995929 MS.gene048218:intron 35.0%
TACACTTCGATCCAAACATA+CGG + chr2.3:62992734-62992753 None:intergenic 35.0%
TATATTGTAGGGTCAGATTC+TGG - chr2.3:62994827-62994846 MS.gene048218:intron 35.0%
TCTGGAGACATTAATGCATT+TGG + chr2.3:62995866-62995885 None:intergenic 35.0%
TGCTGCGCATTTATTCAAAA+AGG - chr2.3:62995266-62995285 MS.gene048218:intron 35.0%
TGGATACCATCAAAATTGAC+AGG - chr2.3:62996198-62996217 MS.gene048218:intron 35.0%
TTTCATGCGCTTTCATACTA+AGG - chr2.3:62995532-62995551 MS.gene048218:intron 35.0%
! ATACACCCTGTCAATTTTGA+TGG + chr2.3:62996207-62996226 None:intergenic 35.0%
! CAATTTTCATAACAGCGGTT+TGG + chr2.3:62993445-62993464 None:intergenic 35.0%
! GCTGACCATTCTTATTTACT+AGG - chr2.3:62994104-62994123 MS.gene048218:CDS 35.0%
! GTATTGAGTGCTTTTCTGTT+GGG - chr2.3:62993154-62993173 MS.gene048218:intron 35.0%
! TAACGAGTTGGATCCAAATA+TGG - chr2.3:62993551-62993570 MS.gene048218:intron 35.0%
! TATTGAGTGCTTTTCTGTTG+GGG - chr2.3:62993155-62993174 MS.gene048218:intron 35.0%
! TGTATTGAGTGCTTTTCTGT+TGG - chr2.3:62993153-62993172 MS.gene048218:intron 35.0%
!! AACCAAAAGGCATCCAATAA+AGG - chr2.3:62994884-62994903 MS.gene048218:CDS 35.0%
!! AATCTGAAGAAAGTGCTTGT+AGG - chr2.3:62995798-62995817 MS.gene048218:intron 35.0%
!! ACCAAAAGGCATCCAATAAA+GGG - chr2.3:62994885-62994904 MS.gene048218:CDS 35.0%
!! ATCTGAAGAAAGTGCTTGTA+GGG - chr2.3:62995799-62995818 MS.gene048218:intron 35.0%
!! CACTGATTTCAACCAAAGAA+GGG + chr2.3:62995126-62995145 None:intergenic 35.0%
!! TACACAATGCTGATTCTTTG+AGG - chr2.3:62994984-62995003 MS.gene048218:CDS 35.0%
!!! ATTTTGCTTCTAGAGGTACT+TGG - chr2.3:62993759-62993778 MS.gene048218:intron 35.0%
AAATGTATGGCATGGGAAAC+TGG - chr2.3:62993916-62993935 MS.gene048218:CDS 40.0%
AAGAAATGAAGGCCCTTCTT+TGG - chr2.3:62995111-62995130 MS.gene048218:intron 40.0%
AATGTATGGCATGGGAAACT+GGG - chr2.3:62993917-62993936 MS.gene048218:CDS 40.0%
AATTGTGGACAATTCCAACG+TGG + chr2.3:62992515-62992534 None:intergenic 40.0%
ACTAAGTGGAGTTAGCTACA+TGG + chr2.3:62993608-62993627 None:intergenic 40.0%
AGAAAGAAGAATGCTGCAAG+TGG - chr2.3:62992053-62992072 MS.gene048218:intron 40.0%
AGCTTCGAAATTATCACCGT+GGG - chr2.3:62992682-62992701 MS.gene048218:intron 40.0%
AGGACATGTCTCATGTTGTT+GGG - chr2.3:62994124-62994143 MS.gene048218:CDS 40.0%
AGTCGAAGCAGATAGATATC+TGG - chr2.3:62995757-62995776 MS.gene048218:intron 40.0%
ATCTTCAGATAAACGGTTGG+AGG + chr2.3:62996101-62996120 None:intergenic 40.0%
ATGGATGCAACTGGATACTA+TGG - chr2.3:62995929-62995948 MS.gene048218:intron 40.0%
ATGTAGCTAACTCCACTTAG+TGG - chr2.3:62993607-62993626 MS.gene048218:intron 40.0%
ATTGTAACAGGACTTCCCAT+GGG - chr2.3:62994539-62994558 MS.gene048218:intron 40.0%
CAATCATTCTTACAGGGTCA+TGG - chr2.3:62993200-62993219 MS.gene048218:CDS 40.0%
CAGAAAAGAACTTCTTGCCA+TGG - chr2.3:62994152-62994171 MS.gene048218:CDS 40.0%
CCTGGAATCGTTAAAATGGA+AGG - chr2.3:62994923-62994942 MS.gene048218:CDS 40.0%
CCTTCTTTGGTTGAAATCAG+TGG - chr2.3:62995124-62995143 MS.gene048218:intron 40.0%
CGTTTATCTGAAGATGCAAG+AGG - chr2.3:62996106-62996125 MS.gene048218:intron 40.0%
CTTCATGTGTACATGTTCAG+TGG - chr2.3:62992612-62992631 MS.gene048218:CDS 40.0%
GAACCGTTATCTCTGAACAT+AGG - chr2.3:62995576-62995595 MS.gene048218:intron 40.0%
GGGAATAGAAATGTATGGCA+TGG - chr2.3:62993908-62993927 MS.gene048218:CDS 40.0%
GTATGTTTGGATCGAAGTGT+AGG - chr2.3:62992733-62992752 MS.gene048218:intron 40.0%
GTCAATGAAATGGATGCAAC+TGG - chr2.3:62995920-62995939 MS.gene048218:intron 40.0%
GTCATTGACAGATTCTCCAA+TGG - chr2.3:62995054-62995073 MS.gene048218:intron 40.0%
TAACTCCACTTAGTGGGATA+AGG - chr2.3:62993614-62993633 MS.gene048218:intron 40.0%
TAAGTCAAAATCTGGGCACA+TGG + chr2.3:62993133-62993152 None:intergenic 40.0%
TAATTATCCTGCTAGACTGC+AGG - chr2.3:62993302-62993321 MS.gene048218:intron 40.0%
TAGCTTAGAAATCATCACCG+TGG - chr2.3:62992537-62992556 MS.gene048218:CDS 40.0%
TAGCTTCGAAATTATCACCG+TGG - chr2.3:62992681-62992700 MS.gene048218:intron 40.0%
TAGGACATGTCTCATGTTGT+TGG - chr2.3:62994123-62994142 MS.gene048218:CDS 40.0%
TATTTCGAATGCGAAACACG+TGG - chr2.3:62992270-62992289 MS.gene048218:CDS 40.0%
TCAACTGTATGTGTAGGTCA+AGG - chr2.3:62992030-62992049 MS.gene048218:intron 40.0%
TCATTCAAAGCCTGACATAC+CGG + chr2.3:62994035-62994054 None:intergenic 40.0%
TGCATCTTCAGATAAACGGT+TGG + chr2.3:62996104-62996123 None:intergenic 40.0%
TGGGTACTTGTGATTGTAAC+AGG - chr2.3:62994527-62994546 MS.gene048218:intron 40.0%
TGGTCCTGGAATCGTTAAAA+TGG - chr2.3:62994919-62994938 MS.gene048218:CDS 40.0%
TGGTTATAACGCGAAAAGAC+AGG - chr2.3:62995144-62995163 MS.gene048218:intron 40.0%
TGTACTGTGTAACTGCACTA+TGG - chr2.3:62992162-62992181 MS.gene048218:CDS 40.0%
TGTAGCTAACTCCACTTAGT+GGG - chr2.3:62993608-62993627 MS.gene048218:intron 40.0%
TTAAATTCACCGCTACTCCT+AGG + chr2.3:62993798-62993817 None:intergenic 40.0%
TTGACTCTAGACGGAGAAAA+GGG + chr2.3:62994590-62994609 None:intergenic 40.0%
TTTATGCTAAGATCCCCCAT+GGG + chr2.3:62994557-62994576 None:intergenic 40.0%
! AAGGGAATTGGTTCATTCTG+AGG - chr2.3:62996242-62996261 MS.gene048218:CDS 40.0%
! AATTCAGAATCTGGAGTTGC+AGG - chr2.3:62992080-62992099 MS.gene048218:intron 40.0%
! AGAGCTTAAGGTTTGAGACA+TGG - chr2.3:62995616-62995635 MS.gene048218:intron 40.0%
! CATTTGTTGAACATGATCGC+AGG - chr2.3:62995706-62995725 MS.gene048218:intron 40.0%
! GCTTCTGATTTTTCGCTGAT+TGG - chr2.3:62994440-62994459 MS.gene048218:intron 40.0%
! TCTCCAATGGACAGAGATTT+TGG - chr2.3:62995067-62995086 MS.gene048218:intron 40.0%
!! AAAAGGCATCCAATAAAGGG+CGG - chr2.3:62994888-62994907 MS.gene048218:CDS 40.0%
!! ATTTTGAGTGTGGATGACTC+GGG + chr2.3:62995325-62995344 None:intergenic 40.0%
!! CCACTGATTTCAACCAAAGA+AGG + chr2.3:62995127-62995146 None:intergenic 40.0%
!! CCTTCCATTTTAACGATTCC+AGG + chr2.3:62994926-62994945 None:intergenic 40.0%
!! CTGATTTTTCGCTGATTGGT+TGG - chr2.3:62994444-62994463 MS.gene048218:intron 40.0%
!! GATTTTGAGTGTGGATGACT+CGG + chr2.3:62995326-62995345 None:intergenic 40.0%
!!! GTTTTTTGTGAGTCAGGTCA+AGG - chr2.3:62993027-62993046 MS.gene048218:intron 40.0%
!!! TTCCTGGTTTTTTGTGAGTC+AGG - chr2.3:62993021-62993040 MS.gene048218:intron 40.0%
AACAATGTCGGCGAAACTAG+TGG + chr2.3:62993473-62993492 None:intergenic 45.0%
AACGTTTGTGCTGCGAGTTA+AGG - chr2.3:62996072-62996091 MS.gene048218:intron 45.0%
AACTTCTTGCCATGGCGAAA+GGG - chr2.3:62994160-62994179 MS.gene048218:CDS 45.0%
ACGATGATGATCCAAGCCAA+AGG - chr2.3:62991872-62991891 MS.gene048218:CDS 45.0%
ACTCGCCGAAATGGAGTTTA+AGG - chr2.3:62995204-62995223 MS.gene048218:intron 45.0%
AGAAGGGCCTTCATTTCTTG+AGG + chr2.3:62995110-62995129 None:intergenic 45.0%
ATACCGGAAGAGGGAAGAAT+GGG + chr2.3:62994019-62994038 None:intergenic 45.0%
CAGCCTTACTTGACTCTAGA+CGG + chr2.3:62994599-62994618 None:intergenic 45.0%
CATCATCTGCATTCCAGTCT+GGG + chr2.3:62993737-62993756 None:intergenic 45.0%
CATGGGGGATCTTAGCATAA+AGG - chr2.3:62994556-62994575 MS.gene048218:intron 45.0%
CCGAGGAAAAGTCAATATGC+CGG - chr2.3:62995498-62995517 MS.gene048218:intron 45.0%
CCTCCAAAATCTCTGTCCAT+TGG + chr2.3:62995073-62995092 None:intergenic 45.0%
CTTGACTCTAGACGGAGAAA+AGG + chr2.3:62994591-62994610 None:intergenic 45.0%
CTTTATGCTAAGATCCCCCA+TGG + chr2.3:62994558-62994577 None:intergenic 45.0%
GACCTGACTCACAAAAAACC+AGG + chr2.3:62993026-62993045 None:intergenic 45.0%
GATTGTAACAGGACTTCCCA+TGG - chr2.3:62994538-62994557 MS.gene048218:intron 45.0%
GTTGATGTTGGCAGCTGTAA+TGG - chr2.3:62992843-62992862 MS.gene048218:CDS 45.0%
GTTTAAGGACACTGACACTG+AGG - chr2.3:62995219-62995238 MS.gene048218:intron 45.0%
TAATACGGTTCCCTGTTGTC+AGG - chr2.3:62993686-62993705 MS.gene048218:intron 45.0%
TATCTGCTTCGACTGAACTG+CGG + chr2.3:62995751-62995770 None:intergenic 45.0%
TCATCATCTGCATTCCAGTC+TGG + chr2.3:62993738-62993757 None:intergenic 45.0%
TCCAACGTGGAAACAAACAC+AGG + chr2.3:62992502-62992521 None:intergenic 45.0%
TCTGGCGCATAAGAGAAGAA+AGG - chr2.3:62995775-62995794 MS.gene048218:intron 45.0%
TGAGAAGGATTTAACACCCG+AGG - chr2.3:62995481-62995500 MS.gene048218:intron 45.0%
TGAGCAATTACTCGCCGAAA+TGG - chr2.3:62995195-62995214 MS.gene048218:intron 45.0%
TGCAGCTAGTGCTAACCAAA+AGG - chr2.3:62994871-62994890 MS.gene048218:intron 45.0%
TGGATGGAAATCACCGTGTT+CGG + chr2.3:62992296-62992315 None:intergenic 45.0%
TTAATGTCTCCAGACTCTGC+TGG - chr2.3:62995872-62995891 MS.gene048218:intron 45.0%
TTGTAACAGGACTTCCCATG+GGG - chr2.3:62994540-62994559 MS.gene048218:intron 45.0%
! ATTATCACCGTGGGAAGTGT+CGG - chr2.3:62992691-62992710 MS.gene048218:intron 45.0%
! CCAATGGACAGAGATTTTGG+AGG - chr2.3:62995070-62995089 MS.gene048218:intron 45.0%
! GCAACAATTTTCTCGCATCC+TGG + chr2.3:62992571-62992590 None:intergenic 45.0%
! GCCCTTTATTGGATGCCTTT+TGG + chr2.3:62994889-62994908 None:intergenic 45.0%
! GTACACATGAAGTGCTTGTC+TGG + chr2.3:62992604-62992623 None:intergenic 45.0%
! TCCAACAAATCTGGTTCCAC+TGG - chr2.3:62994699-62994718 MS.gene048218:intron 45.0%
! TCTCCGTCTAGAGTCAAGTA+AGG - chr2.3:62994593-62994612 MS.gene048218:intron 45.0%
! TGATGAAAGAAAGCGCAGGA+AGG - chr2.3:62995418-62995437 MS.gene048218:intron 45.0%
! TTTGGAACCCCGTGATTGTT+CGG + chr2.3:62995848-62995867 None:intergenic 45.0%
!! AAAGGCATCCAATAAAGGGC+GGG - chr2.3:62994889-62994908 MS.gene048218:CDS 45.0%
!! TGTGTTGCTTGCTCTTCGTA+AGG - chr2.3:62992404-62992423 MS.gene048218:intron 45.0%
!!! CCGGCATATTGACTTTTCCT+CGG + chr2.3:62995501-62995520 None:intergenic 45.0%
!!! CGGCATATTGACTTTTCCTC+GGG + chr2.3:62995500-62995519 None:intergenic 45.0%
!!! CATTTTTATTTTATAAATAT+TGG - chr2.3:62994482-62994501 MS.gene048218:intron 5.0%
AAAGCCTGACATACCGGAAG+AGG + chr2.3:62994029-62994048 None:intergenic 50.0%
AAGCCTGACATACCGGAAGA+GGG + chr2.3:62994028-62994047 None:intergenic 50.0%
AAGGAGCAGGTGAAGCGAAA+AGG - chr2.3:62993046-62993065 MS.gene048218:intron 50.0%
AGGAGCAGGTGAAGCGAAAA+GGG - chr2.3:62993047-62993066 MS.gene048218:intron 50.0%
ATGTTGGCAGCTGTAATGGC+AGG - chr2.3:62992847-62992866 MS.gene048218:CDS 50.0%
ATTGGAAGTCAAACGGCCAG+TGG + chr2.3:62994718-62994737 None:intergenic 50.0%
CAAAGGTGGCGACATGCAAT+TGG + chr2.3:62992371-62992390 None:intergenic 50.0%
CATACCGGAAGAGGGAAGAA+TGG + chr2.3:62994020-62994039 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr2.3:62993619-62993638 MS.gene048218:intron 50.0%
CTGGCAGAATTTACAGCCGA+TGG + chr2.3:62996048-62996067 None:intergenic 50.0%
GAACTTCTTGCCATGGCGAA+AGG - chr2.3:62994159-62994178 MS.gene048218:CDS 50.0%
GCAGAAGTTGCTGAGCATGT+TGG - chr2.3:62993939-62993958 MS.gene048218:CDS 50.0%
GCCAGTGGAACCAGATTTGT+TGG + chr2.3:62994703-62994722 None:intergenic 50.0%
GCCTGTGTTTGTTTCCACGT+TGG - chr2.3:62992498-62992517 MS.gene048218:CDS 50.0%
GGCACATGGCACACTTGATA+CGG + chr2.3:62993119-62993138 None:intergenic 50.0%
TAAGGACACTGACACTGAGG+AGG - chr2.3:62995222-62995241 MS.gene048218:intron 50.0%
TACCGGAAGAGGGAAGAATG+GGG + chr2.3:62994018-62994037 None:intergenic 50.0%
TCCAGTCTGGGCAAATGAGA+GGG + chr2.3:62993725-62993744 None:intergenic 50.0%
TGATCAACCTGCAGTCTAGC+AGG + chr2.3:62993312-62993331 None:intergenic 50.0%
TGTAACAGGACTTCCCATGG+GGG - chr2.3:62994541-62994560 MS.gene048218:intron 50.0%
TTCCAGTCTGGGCAAATGAG+AGG + chr2.3:62993726-62993745 None:intergenic 50.0%
TTGACAGAACTTGACCCTGC+AGG + chr2.3:62995905-62995924 None:intergenic 50.0%
TTGGAACCCCGTGATTGTTC+GGG + chr2.3:62995847-62995866 None:intergenic 50.0%
! AAGGCATCCAATAAAGGGCG+GGG - chr2.3:62994890-62994909 MS.gene048218:CDS 50.0%
! CATCGGCTGTAAATTCTGCC+AGG - chr2.3:62996046-62996065 MS.gene048218:intron 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr2.3:62993622-62993641 None:intergenic 50.0%
! GGCTTGATGAAAGAAAGCGC+AGG - chr2.3:62995414-62995433 MS.gene048218:intron 50.0%
!! GCAGCATGTGTGTTGACTGA+GGG + chr2.3:62994854-62994873 None:intergenic 50.0%
!! TGCAGCATGTGTGTTGACTG+AGG + chr2.3:62994855-62994874 None:intergenic 50.0%
!! TTATCACCGTGGGAAGTGTC+GGG - chr2.3:62992692-62992711 MS.gene048218:intron 50.0%
AATAAAGGGCGGGGGAAAGG+TGG - chr2.3:62994899-62994918 MS.gene048218:CDS 55.0%
ACCTTTCCCCCGCCCTTTAT+TGG + chr2.3:62994900-62994919 None:intergenic 55.0%
AGAACTTGACCCTGCAGGTC+TGG + chr2.3:62995900-62995919 None:intergenic 55.0%
AGGCATCCAATAAAGGGCGG+GGG - chr2.3:62994891-62994910 MS.gene048218:CDS 55.0%
ATCACCGTGGAATGTGTGCC+AGG - chr2.3:62992550-62992569 MS.gene048218:CDS 55.0%
CGCAGCACAAACGTTTCTCC+TGG + chr2.3:62996067-62996086 None:intergenic 55.0%
CTCCCCATTCTTCCCTCTTC+CGG - chr2.3:62994013-62994032 MS.gene048218:intron 55.0%
CTTCCCTCTTCCGGTATGTC+AGG - chr2.3:62994022-62994041 MS.gene048218:intron 55.0%
GCATCCTGGCACACATTCCA+CGG + chr2.3:62992557-62992576 None:intergenic 55.0%
TCCAATAAAGGGCGGGGGAA+AGG - chr2.3:62994896-62994915 MS.gene048218:CDS 55.0%
TCCCTCTCATTTGCCCAGAC+TGG - chr2.3:62993721-62993740 MS.gene048218:intron 55.0%
TGTGAGTCAGGTCAAGGAGC+AGG - chr2.3:62993033-62993052 MS.gene048218:intron 55.0%
! GTGCTTTTCTGTTGGGGCTG+AGG - chr2.3:62993161-62993180 MS.gene048218:CDS 55.0%
CAGCTGTAATGGCAGGCCGA+TGG - chr2.3:62992854-62992873 MS.gene048218:CDS 60.0%
CTGCTGGTACCAGACCTGCA+GGG - chr2.3:62995888-62995907 MS.gene048218:intron 60.0%
CTTGCCATGGCGAAAGGGCA+GGG - chr2.3:62994165-62994184 MS.gene048218:CDS 60.0%
GCGAAACACGTGGCCGAACA+CGG - chr2.3:62992280-62992299 MS.gene048218:CDS 60.0%
GGGCAGGGTGAGGACAAGAA+AGG - chr2.3:62994180-62994199 MS.gene048218:intron 60.0%
GGTCTGGTACCAGCAGAGTC+TGG + chr2.3:62995884-62995903 None:intergenic 60.0%
TCGCATCCCGACACTTCCCA+CGG + chr2.3:62992701-62992720 None:intergenic 60.0%
TCTGCTGGTACCAGACCTGC+AGG - chr2.3:62995887-62995906 MS.gene048218:intron 60.0%
TCTTGCCATGGCGAAAGGGC+AGG - chr2.3:62994164-62994183 MS.gene048218:CDS 60.0%
CATGGCGAAAGGGCAGGGTG+AGG - chr2.3:62994170-62994189 MS.gene048218:CDS 65.0%
CTCACCCTGCCCTTTCGCCA+TGG + chr2.3:62994172-62994191 None:intergenic 65.0%
TCGCAGGAAGCTCGTGCTGC+TGG - chr2.3:62995722-62995741 MS.gene048218:intron 65.0%
GGGCGGGGGAAAGGTGGTCC+TGG - chr2.3:62994905-62994924 MS.gene048218:CDS 75.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 62991841 62996262 62991841 ID=MS.gene048218
chr2.3 mRNA 62991841 62996262 62991841 ID=MS.gene048218.t1;Parent=MS.gene048218
chr2.3 exon 62996210 62996262 62996210 ID=MS.gene048218.t1.exon1;Parent=MS.gene048218.t1
chr2.3 CDS 62996210 62996262 62996210 ID=cds.MS.gene048218.t1;Parent=MS.gene048218.t1
chr2.3 exon 62996002 62996057 62996002 ID=MS.gene048218.t1.exon2;Parent=MS.gene048218.t1
chr2.3 CDS 62996002 62996057 62996002 ID=cds.MS.gene048218.t1;Parent=MS.gene048218.t1
chr2.3 exon 62994882 62995060 62994882 ID=MS.gene048218.t1.exon3;Parent=MS.gene048218.t1
chr2.3 CDS 62994882 62995060 62994882 ID=cds.MS.gene048218.t1;Parent=MS.gene048218.t1
chr2.3 exon 62994330 62994395 62994330 ID=MS.gene048218.t1.exon4;Parent=MS.gene048218.t1
chr2.3 CDS 62994330 62994395 62994330 ID=cds.MS.gene048218.t1;Parent=MS.gene048218.t1
chr2.3 exon 62994069 62994194 62994069 ID=MS.gene048218.t1.exon5;Parent=MS.gene048218.t1
chr2.3 CDS 62994069 62994194 62994069 ID=cds.MS.gene048218.t1;Parent=MS.gene048218.t1
chr2.3 exon 62993902 62993977 62993902 ID=MS.gene048218.t1.exon6;Parent=MS.gene048218.t1
chr2.3 CDS 62993902 62993977 62993902 ID=cds.MS.gene048218.t1;Parent=MS.gene048218.t1
chr2.3 exon 62993494 62993554 62993494 ID=MS.gene048218.t1.exon7;Parent=MS.gene048218.t1
chr2.3 CDS 62993494 62993554 62993494 ID=cds.MS.gene048218.t1;Parent=MS.gene048218.t1
chr2.3 exon 62993356 62993414 62993356 ID=MS.gene048218.t1.exon8;Parent=MS.gene048218.t1
chr2.3 CDS 62993356 62993414 62993356 ID=cds.MS.gene048218.t1;Parent=MS.gene048218.t1
chr2.3 exon 62993159 62993266 62993159 ID=MS.gene048218.t1.exon9;Parent=MS.gene048218.t1
chr2.3 CDS 62993159 62993266 62993159 ID=cds.MS.gene048218.t1;Parent=MS.gene048218.t1
chr2.3 exon 62992816 62993038 62992816 ID=MS.gene048218.t1.exon10;Parent=MS.gene048218.t1
chr2.3 CDS 62992816 62993038 62992816 ID=cds.MS.gene048218.t1;Parent=MS.gene048218.t1
chr2.3 exon 62992478 62992688 62992478 ID=MS.gene048218.t1.exon11;Parent=MS.gene048218.t1
chr2.3 CDS 62992478 62992688 62992478 ID=cds.MS.gene048218.t1;Parent=MS.gene048218.t1
chr2.3 exon 62992130 62992375 62992130 ID=MS.gene048218.t1.exon12;Parent=MS.gene048218.t1
chr2.3 CDS 62992130 62992375 62992130 ID=cds.MS.gene048218.t1;Parent=MS.gene048218.t1
chr2.3 exon 62991841 62992035 62991841 ID=MS.gene048218.t1.exon13;Parent=MS.gene048218.t1
chr2.3 CDS 62991841 62992035 62991841 ID=cds.MS.gene048218.t1;Parent=MS.gene048218.t1
Gene Sequence

>MS.gene048218

ATGGGTCGTTCTCGTGGTAATTTTCATCATAACGATGATGATCCAAGCCAAAGGTTTGATTTTTTATCCATCTTTTCTTATTATTATAATTGGGTCATAATGTAATTGAATTTTGCACAATTTGTTTATCTGAATTTGATTGATCATAGATATAGTAAAATGCTGTGGTAATTTTGCCATATGATGCTTTCAACTGTATGTGTAGGTCAAGGAGAAAGAAGAATGCTGCAAGTGGAGATAATTCAGAATCTGGAGTTGCAGGTACTTTTTCAACTATCATGTACCATTGTACTTGGTTAATTGTATAATGCACTATGAAATTGTACTGTGTAACTGCACTATGGAGATATTGTTTCTAAAATTTAAATTTACTATGTTTACAAATCAAATAAAAAGTGAATAGATATAAGTATAATGAGAAATGTTGTATATTTCGAATGCGAAACACGTGGCCGAACACGGTGATTTCCATCCAAGTTAAAGTTTATATTTTTCCATCTTTAAATATTATTTATGTTATTTAAAAACCAATTGCATGTCGCCACCTTTGCATTCATCGATTTTGTGTTGCTTGCTCTTCGTAAGGAGTAGCATAGCTCTTAGTATAATATATATTCGTACCATATAAGTCTTTAACTTTAGTGTATTATAAAATTAGCCTGTGTTTGTTTCCACGTTGGAATTGTCCACAATTTGTAGCTTAGAAATCATCACCGTGGAATGTGTGCCAGGATGCGAGAAAATTGTTGCTGACACGTTACCAGACAAGCACTTCATGTGTACATGTTCAGTGGAGTATATGTTTGTAGATGTTGTTTTACGCTTCACTTTGACAATTTGTAGCTTCGAAATTATCACCGTGGGAAGTGTCGGGATGCGAGAAACTGTAACCGTATGTTTGGATCGAAGTGTAGGTTTGAAACGGAAATCCAAACATCCCTTAAATTACATTGTCATCTACTGAATACAAAATTCTTAATATCTTTCCGTATGACTGAATAAGTTGATGTTGGCAGCTGTAATGGCAGGCCGATGGAGTGTTTGTTTGAATAAAGATAGTGAACCATTTTTCGCTAAAGAATGAAATATACTATAACAGTGATTGTTATTTAGAGCTTCAATTGTCTATTTATTGATTTATTTAAGATTCATTGATATTGTTGAATGTTTGATAATAATTTTCCTGGTTTTTTGTGAGTCAGGTCAAGGAGCAGGTGAAGCGAAAAGGGCTTTGTATCATTGCAATTACTGTAATAAAGATATTACAGGAAAAATCCGTATCAAGTGTGCCATGTGCCCAGATTTTGACTTATGTATTGAGTGCTTTTCTGTTGGGGCTGAGGTGACACCCCACAAAAGCAATCATTCTTACAGGGTCATGGTGAGTAACCATTACTTTCAAATGTTTTCCTTTGATGTCTTATTAAACATAACCTTTTGATCAATCGAAAGGTTATACAGTAATTATCCTGCTAGACTGCAGGTTGATCACTCTGAGTTTAATTACAGGATTAATCATTTAAGTTAGATTCGAAATTATCTGATACTGTTTTTTTTATCACGTTGAGTATAAATCATATTTAAAATAATTTACGTATCTGCCAAACCGCTGTTATGAAAATTGCATTACCACTAGTTTCGCCGACATTGTTGTTATCATTGCTTTGTTTCTCTATCTATAAGAGAAACTATTTGGAAAGATTTAGAGGTTAACGAGTTGGATCCAAATATGGTTTATGATAGAACATTATGGCGTAATTTGATCCATGTAGCTAACTCCACTTAGTGGGATAAGGCTTGGTTGTTGTTGTTGTTGTATTGCTTTGTTTCTCTATATCAGTTTTTTAATACGGTTCCCTGTTGTCAGGATAATTTGTCTTTCCCTCTCATTTGCCCAGACTGGAATGCAGATGATGAAATTTTGCTTCTAGAGGTACTTGGTTTAAATTAATTGCCTAGGAGTAGCGGTGAATTTAATATGATAATATGATAAAGCATTATATTTGGTGTTGAAGAAGAAATCTACTATTAATATCTGACTTTTCTAGCAACAAATTTTTGGTTTTAGGGAATAGAAATGTATGGCATGGGAAACTGGGCAGAAGTTGCTGAGCATGTTGGAACAAAGAACAAAGAAGCATGCATAGAACACTATAGGAATGTGTACTTAAACTCCCCATTCTTCCCTCTTCCGGTATGTCAGGCTTTGAATGAAGCTGCAATCAGTGCTTATCATATTCGTTTATATAAAGGTATTTTAAATGCTGACCATTCTTATTTACTAGGACATGTCTCATGTTGTTGGGAAAAACAGAAAAGAACTTCTTGCCATGGCGAAAGGGCAGGGTGAGGACAAGAAAGGTTTGTCTCAATACACAACATCACATTCATTAGTTTCTGTAGTTTTTGGGGAAAAAATGATTTCACTTACATAGCATACTGTTATAAATCAGGAATGTCTCATTTATCACTTCTTTTGGATAGATTTATATTGATATACTGTATCTCCAAACAATAAATAATAATGCCTCATTTATGTTGCTGATAACTGCTAAAATATGTTTCAGAGAATAAATTTATTATAATCTATGATTCTATGGCTTCTGATTTTTCGCTGATTGGTTGGTTTTTGTTTTGGTCGCATTTTTATTTTATAAATATTGGTCACATTCTTCTTTATAAATACTGGGTACTTGTGATTGTAACAGGACTTCCCATGGGGGATCTTAGCATAAAGGAAGAATCACCCTTTTCTCCGTCTAGAGTCAAGTAAGGCTGTCATTTTTCGTACGCATTAACTCTTGCCATGTTCAATACCATGTTGATTGACTTCTAAATGTTGATTCAGAATGGAAGATTCCAACAAATCTGGTTCCACTGGCCGTTTGACTTCCAATATGAATTCAGGTAAGCTAAATAAGTCAATAGCTAAGACATATACAACAATTTCCCAATTATAATTTCCTTTCAATCTCTATATTGTTTATATATTGTAGGGTCAGATTCTGGGCCCTCAGTCAACACACATGCTGCAGCTAGTGCTAACCAAAAGGCATCCAATAAAGGGCGGGGGAAAGGTGGTCCTGGAATCGTTAAAATGGAAGGTGTGCATTTTATATTTGGTCATAAATCCCAATTGACATTACACAATGCTGATTCTTTGAGGAAATTCATCTCATGACTTTACATTCTGTATTTAATCCTAGTTCTTTTGTCATTGACAGATTCTCCAATGGACAGAGATTTTGGAGGAAATAAGCCAAATTCCTCAAGAAATGAAGGCCCTTCTTTGGTTGAAATCAGTGGTTATAACGCGAAAAGACAGGAATTTGATCCTGAATATGATAATGATGCTGAGCAATTACTCGCCGAAATGGAGTTTAAGGACACTGACACTGAGGAGGAGCGAGAGATCAAACTTCGTGTGCTGCGCATTTATTCAAAAAGGTAAACAACCATTTTAGTTTTATAGGTTTCTTTACCCGAGTCATCCACACTCAAAATCATAAACAATAATGGTATTTGTTGCATAGTATTGCTCACGTTCCTATCTTTAAATTGAAAAACTTTGCAGGCTTGATGAAAGAAAGCGCAGGAAGGAATTCATACTTGAAAGAAATTTGCTTTATCCAAATCCATTTGAGAAGGATTTAACACCCGAGGAAAAGTCAATATGCCGGAAATATGACATTTTCATGCGCTTTCATACTAAGGAAGAGCACGATGAATTACTCAGAACCGTTATCTCTGAACATAGGACTCTGAAAAGAATTCAAGAGCTTAAGGTTTGAGACATGGATGCCATTAAATTCTTATCGACATTCCCTTTTTTTCTCTACTTGGAAAATTGAACAGTCATCTCTGACATTTGTTGAACATGATCGCAGGAAGCTCGTGCTGCTGGTTGCCGCAGTTCAGTCGAAGCAGATAGATATCTGGCGCATAAGAGAAGAAAGGAATCTGAAGAAAGTGCTTGTAGGGCGAGAGAAAGTGCTCATGTGGTCCCGAACAATCACGGGGTTCCAAATGCATTAATGTCTCCAGACTCTGCTGGTACCAGACCTGCAGGGTCAAGTTCTGTCAATGAAATGGATGCAACTGGATACTATGGAGCAGATTTACTTTCTGAAGCTGTAAGAATAATTTTCTTCTGCCAAGTTTGCATTCTAAAACTGTACATTGCTTCTTATTTCGTTTTCTGAAACCATCGGCTGTAAATTCTGCCAGGAGAAACGTTTGTGCTGCGAGTTAAGGTTGCCTCCAACCGTTTATCTGAAGATGCAAGAGGACCTATCTGTACAAATGATTGCTGGTAACGTCTCTTCAAAATCTGATGCTCATCAAATGTTCAAGAATGTGGATACCATCAAAATTGACAGGGTGTATGATATGCTCATTAAGAAGGGAATTGGTTCATTCTGA
Protein sequence

>MS.gene048218.t1

MGRSRGNFHHNDDDPSQRSRRKKNAASGDNSESGVAGQGAGEAKRALYHCNYCNKDITGKIRIKCAMCPDFDLCIECFSVGAEVTPHKSNHSYRVMDNLSFPLICPDWNADDEILLLEGIEMYGMGNWAEVAEHVGTKNKEACIEHYRNVYLNSPFFPLPDMSHVVGKNRKELLAMAKGQGEDKKGLPMGDLSIKEESPFSPSRVKMEDSNKSGSTGRLTSNMNSGSDSGPSVNTHAAASANQKASNKGRGKGGPGIVKMEDSPMDRDFGGNKPNSSRNEGPSLVEISGYNAKRQEFDPEYDNDAEQLLAEMEFKDTDTEEEREIKLRVLRIYSKRLDERKRRKEFILERNLLYPNPFEKDLTPEEKSICRKYDIFMRFHTKEEHDELLRTVISEHRTLKRIQELKEARAAGCRSSVEADRYLAHKRRKESEESACRARESAHVVPNNHGVPNALMSPDSAGTRPAGSSSVNEMDATGYYGADLLSEAEKRLCCELRLPPTVYLKMQEDLSVQMIAGNVSSKSDAHQMFKNVDTIKIDRVYDMLIKKGIGSF