AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene048486

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene048486.t1 MTR_3g464530 93.865 326 20 0 1 326 1 326 0.0 621
MS.gene048486.t1 MTR_3g464530 92.857 252 18 0 1 252 1 252 2.03e-169 471
MS.gene048486.t1 MTR_2g083030 34.670 349 178 13 4 321 1 330 6.15e-56 185
MS.gene048486.t1 MTR_7g451860 35.873 315 169 9 27 321 35 336 1.09e-54 182
MS.gene048486.t1 MTR_7g047670 35.873 315 169 9 27 321 35 336 1.09e-54 182
MS.gene048486.t1 MTR_4g074130 33.046 348 192 9 4 323 2 336 1.94e-54 181
MS.gene048486.t1 MTR_5g005570 33.721 344 190 10 1 321 1 329 2.19e-54 181
MS.gene048486.t1 MTR_2g083000 33.626 342 186 11 4 321 1 325 3.52e-52 175
MS.gene048486.t1 MTR_4g015790 33.444 302 164 10 34 306 62 355 1.36e-43 154
MS.gene048486.t1 MTR_3g070860 33.443 305 151 9 34 302 50 338 3.68e-42 149
MS.gene048486.t1 MTR_8g024120 34.247 292 164 7 31 301 39 323 4.86e-42 149
MS.gene048486.t1 MTR_7g068650 31.699 306 156 9 34 302 54 343 2.17e-41 147
MS.gene048486.t1 MTR_5g082750 32.787 305 171 9 25 302 40 337 4.24e-41 147
MS.gene048486.t1 MTR_4g087110 30.745 322 168 11 24 301 16 326 6.43e-41 146
MS.gene048486.t1 MTR_4g087120 31.173 324 164 10 24 301 16 326 7.07e-41 146
MS.gene048486.t1 MTR_8g009110 31.250 320 180 11 31 322 57 364 2.51e-39 142
MS.gene048486.t1 MTR_4g087100 29.787 329 176 12 24 308 16 333 3.34e-39 142
MS.gene048486.t1 MTR_4g087140 30.650 323 168 13 24 301 16 327 4.08e-39 141
MS.gene048486.t1 MTR_8g009160 33.077 260 151 7 34 279 60 310 8.44e-39 141
MS.gene048486.t1 MTR_3g083370 32.472 271 156 8 32 288 2 259 9.97e-38 137
MS.gene048486.t1 MTR_1g034120 29.448 326 173 12 24 303 16 330 1.71e-37 137
MS.gene048486.t1 MTR_2g025120 30.882 272 155 8 34 288 4 259 5.14e-37 135
MS.gene048486.t1 MTR_8g008930 32.075 265 148 9 34 279 60 311 9.71e-37 135
MS.gene048486.t1 MTR_8g009170 32.168 286 165 10 9 279 40 311 1.23e-36 135
MS.gene048486.t1 MTR_8g028435 33.077 260 151 7 34 279 60 310 1.37e-36 135
MS.gene048486.t1 MTR_7g063730 29.934 304 177 8 21 301 55 345 1.70e-36 135
MS.gene048486.t1 MTR_1g034060 29.141 326 174 12 24 303 16 330 2.57e-36 134
MS.gene048486.t1 MTR_8g009090 30.405 296 171 9 34 303 60 346 4.43e-36 134
MS.gene048486.t1 MTR_5g085330 30.508 295 165 9 34 301 5 286 4.77e-36 132
MS.gene048486.t1 MTR_7g062570 28.889 270 174 4 31 289 52 314 8.24e-36 133
MS.gene048486.t1 MTR_5g055690 33.205 259 152 7 34 279 47 297 8.36e-36 132
MS.gene048486.t1 MTR_1g034140 31.922 307 163 11 32 303 25 320 1.38e-35 132
MS.gene048486.t1 MTR_1g033810 31.507 292 160 9 7 282 34 301 1.79e-35 132
MS.gene048486.t1 MTR_4g117880 30.909 275 167 7 34 295 60 324 1.86e-35 132
MS.gene048486.t1 MTR_4g087090 29.630 324 178 10 24 308 20 332 1.99e-35 131
MS.gene048486.t1 MTR_3g072810 32.099 324 184 11 2 302 12 322 3.13e-35 130
MS.gene048486.t1 MTR_3g092890 28.720 289 182 5 34 304 38 320 4.00e-35 130
MS.gene048486.t1 MTR_2g069190 32.700 263 147 9 34 279 68 317 5.69e-35 130
MS.gene048486.t1 MTR_0328s0030 33.206 262 153 7 34 282 45 297 8.57e-35 130
MS.gene048486.t1 MTR_2g069300 29.348 276 169 7 34 295 54 317 1.88e-34 129
MS.gene048486.t1 MTR_5g048550 30.690 290 173 9 18 288 25 305 2.79e-34 129
MS.gene048486.t1 MTR_2g069090 30.201 298 173 9 34 305 68 356 3.67e-34 129
MS.gene048486.t1 MTR_8g064200 30.116 259 160 6 34 279 57 307 4.31e-34 128
MS.gene048486.t1 MTR_8g064200 30.116 259 160 6 34 279 52 302 4.31e-34 128
MS.gene048486.t1 MTR_5g048570 30.970 268 163 7 34 288 45 303 1.10e-33 127
MS.gene048486.t1 MTR_0009s0480 30.268 261 162 6 34 282 46 298 1.38e-33 127
MS.gene048486.t1 MTR_5g048470 30.268 261 157 8 34 279 53 303 2.70e-33 126
MS.gene048486.t1 MTR_5g055800 33.208 265 149 8 34 282 47 299 3.91e-33 125
MS.gene048486.t1 MTR_7g062580 27.675 271 176 5 31 289 52 314 4.03e-33 125
MS.gene048486.t1 MTR_0009s0050 30.597 268 164 7 34 288 47 305 4.39e-33 125
MS.gene048486.t1 MTR_0009s0050 30.597 268 164 7 34 288 47 305 5.00e-33 125
MS.gene048486.t1 MTR_5g048850 30.651 261 155 6 34 279 47 296 5.17e-33 125
MS.gene048486.t1 MTR_5g055820 31.418 261 154 9 34 279 47 297 6.54e-33 125
MS.gene048486.t1 MTR_5g048740 32.700 263 154 9 31 279 42 295 9.83e-33 124
MS.gene048486.t1 MTR_5g055900 29.588 267 168 6 34 288 47 305 1.09e-31 122
MS.gene048486.t1 MTR_2g070870 28.136 295 176 11 31 302 25 306 1.24e-31 121
MS.gene048486.t1 MTR_5g055680 28.383 303 186 8 9 288 11 305 1.35e-31 121
MS.gene048486.t1 MTR_2g102570 29.693 293 170 10 34 301 52 333 4.00e-31 120
MS.gene048486.t1 MTR_3g088565 29.545 264 159 7 34 282 3 254 6.64e-31 119
MS.gene048486.t1 MTR_2g069210 27.839 273 172 7 47 303 86 349 9.90e-31 119
MS.gene048486.t1 MTR_2g072910 30.515 272 157 8 25 279 46 302 2.71e-30 118
MS.gene048486.t1 MTR_2g072890 27.869 305 186 9 2 288 24 312 3.55e-30 117
MS.gene048486.t1 MTR_7g062550 26.246 301 198 6 1 289 31 319 3.84e-30 118
MS.gene048486.t1 MTR_2g437380 26.645 304 179 11 29 301 46 336 3.87e-30 117
MS.gene048486.t1 MTR_8g461330 29.180 305 169 13 31 302 24 314 5.31e-30 117
MS.gene048486.t1 MTR_4g087130 27.726 321 178 9 24 301 16 325 9.39e-30 116
MS.gene048486.t1 MTR_3g091350 29.779 272 157 8 34 285 59 316 9.61e-30 117
MS.gene048486.t1 MTR_8g009080 28.926 242 152 7 45 279 114 342 1.05e-29 117
MS.gene048486.t1 MTR_5g059130 29.932 294 165 10 10 282 24 297 1.06e-29 116
MS.gene048486.t1 MTR_8g009170 30.597 268 158 9 9 262 40 293 1.26e-29 115
MS.gene048486.t1 MTR_8g062600 29.889 271 157 9 34 286 67 322 1.33e-29 116
MS.gene048486.t1 MTR_1g043760 30.418 263 151 9 34 279 54 301 1.38e-29 116
MS.gene048486.t1 MTR_5g055690 32.203 236 139 7 34 256 47 274 2.65e-29 113
MS.gene048486.t1 MTR_1g093110 28.000 350 187 14 18 322 44 373 3.15e-29 115
MS.gene048486.t1 MTR_7g062600 25.497 302 200 7 1 289 22 311 4.09e-29 115
MS.gene048486.t1 MTR_1g081840 26.948 308 190 8 8 289 24 322 4.77e-29 115
MS.gene048486.t1 MTR_5g059140 30.000 270 154 8 34 282 42 297 5.39e-29 114
MS.gene048486.t1 MTR_5g025050 27.483 302 189 8 31 315 2 290 5.86e-29 113
MS.gene048486.t1 MTR_3g091360 29.412 272 158 8 34 285 52 309 6.10e-29 114
MS.gene048486.t1 MTR_2g068950 27.240 279 136 8 34 277 63 309 1.32e-28 114
MS.gene048486.t1 MTR_4g024660 29.693 293 170 10 23 295 56 332 1.35e-28 114
MS.gene048486.t1 MTR_3g088745 27.596 337 195 14 18 314 17 344 2.16e-28 113
MS.gene048486.t1 MTR_6g015950 26.712 292 191 6 31 304 36 322 2.54e-28 112
MS.gene048486.t1 MTR_3g072820 27.368 285 184 8 10 282 22 295 3.74e-28 112
MS.gene048486.t1 MTR_7g062560 27.389 314 190 8 11 305 43 337 4.29e-28 112
MS.gene048486.t1 MTR_4g093840 28.966 290 166 10 25 289 49 323 4.40e-28 112
MS.gene048486.t1 MTR_2g069060 28.627 255 161 6 34 276 49 294 5.56e-28 111
MS.gene048486.t1 MTR_5g025090 27.431 288 180 8 32 302 3 278 8.63e-28 110
MS.gene048486.t1 MTR_2g068960 27.046 281 138 8 34 279 63 311 2.35e-27 110
MS.gene048486.t1 MTR_8g041620 28.992 238 148 7 50 279 95 319 2.84e-27 110
MS.gene048486.t1 MTR_8g063070 28.302 265 155 9 34 279 67 315 4.05e-27 109
MS.gene048486.t1 MTR_8g093930 24.756 307 187 7 34 307 47 342 5.50e-27 109
MS.gene048486.t1 MTR_1g070120 26.433 314 197 9 18 304 16 322 5.98e-27 108
MS.gene048486.t1 MTR_2g019370 27.815 302 170 12 34 302 28 314 1.12e-26 107
MS.gene048486.t1 MTR_5g027230 25.862 290 186 7 31 303 3 280 1.27e-26 107
MS.gene048486.t1 MTR_5g048850 30.213 235 138 6 34 253 47 270 1.28e-26 106
MS.gene048486.t1 MTR_3g117420 28.090 267 163 7 34 282 52 307 2.54e-26 107
MS.gene048486.t1 MTR_1g093140 27.778 270 167 9 34 287 73 330 3.10e-26 107
MS.gene048486.t1 MTR_0009s0480 29.437 231 143 6 34 252 46 268 3.23e-26 105
MS.gene048486.t1 MTR_6g464620 28.205 273 174 7 34 288 64 332 4.27e-26 107
MS.gene048486.t1 MTR_1g102070 27.244 312 181 10 31 312 70 365 5.47e-26 106
MS.gene048486.t1 MTR_3g063180 27.632 304 182 12 30 301 35 332 7.53e-26 105
MS.gene048486.t1 MTR_8g041600 27.935 247 149 7 45 279 90 319 1.08e-25 105
MS.gene048486.t1 MTR_1g011580 28.996 269 172 8 29 288 58 316 1.11e-25 105
MS.gene048486.t1 MTR_4g116010 29.846 325 183 14 16 314 25 330 1.77e-25 105
MS.gene048486.t1 MTR_1g093120 26.437 261 165 7 34 279 67 315 2.13e-25 105
MS.gene048486.t1 MTR_3g083370 29.787 235 138 8 32 252 2 223 2.47e-25 102
MS.gene048486.t1 MTR_7g045650 26.587 252 165 5 25 264 51 294 2.59e-25 103
MS.gene048486.t1 MTR_2g025120 29.167 216 127 7 47 252 24 223 3.66e-25 101
MS.gene048486.t1 MTR_7g077670 27.950 322 174 12 34 319 11 310 5.34e-25 103
MS.gene048486.t1 MTR_3g096500 25.478 314 190 10 35 312 67 372 6.66e-25 103
MS.gene048486.t1 MTR_8g033380 26.190 294 183 9 34 301 54 339 6.89e-25 103
MS.gene048486.t1 MTR_1g070135 24.315 292 193 7 34 304 38 322 7.15e-25 103
MS.gene048486.t1 MTR_7g016090 27.018 285 192 7 17 292 24 301 1.09e-24 102
MS.gene048486.t1 MTR_7g016090 27.018 285 192 7 17 292 22 299 1.14e-24 102
MS.gene048486.t1 MTR_8g030880 27.103 321 179 12 34 319 10 310 1.55e-24 101
MS.gene048486.t1 MTR_1g043775 30.000 270 153 11 30 279 50 303 1.74e-24 102
MS.gene048486.t1 MTR_5g032880 29.553 291 177 9 31 301 35 317 1.86e-24 104
MS.gene048486.t1 MTR_5g032880 26.144 306 182 9 32 305 374 667 5.28e-22 97.1
MS.gene048486.t1 MTR_6g092620 28.676 272 163 8 34 288 3 260 1.99e-24 101
MS.gene048486.t1 MTR_2g069020 27.734 256 164 5 34 277 67 313 3.14e-24 101
MS.gene048486.t1 MTR_7g102720 25.850 294 190 8 10 288 12 292 3.19e-24 101
MS.gene048486.t1 MTR_8g074070 26.761 284 182 6 34 298 52 328 3.50e-24 101
MS.gene048486.t1 MTR_2g069020 27.734 256 164 5 34 277 67 313 4.37e-24 101
MS.gene048486.t1 MTR_1g043770 27.368 285 174 10 7 279 37 300 5.49e-24 100
MS.gene048486.t1 MTR_7g029655 27.113 284 176 8 18 279 40 314 7.49e-24 100
MS.gene048486.t1 MTR_0032s0040 27.306 271 155 9 34 281 70 321 7.76e-24 100
MS.gene048486.t1 MTR_5g022020 25.890 309 187 12 31 309 36 332 8.07e-24 100
MS.gene048486.t1 MTR_1g070185 28.421 285 167 10 34 300 69 334 8.35e-24 100
MS.gene048486.t1 MTR_8g009150 27.099 262 152 7 34 283 60 294 9.49e-24 100
MS.gene048486.t1 MTR_1g070080 25.000 292 191 8 34 304 38 322 9.97e-24 100
MS.gene048486.t1 MTR_1g062110 28.302 265 158 8 34 277 66 319 1.02e-23 100
MS.gene048486.t1 MTR_8g009080 28.384 229 143 8 45 265 114 329 1.03e-23 99.8
MS.gene048486.t1 MTR_8g009120 29.747 316 172 15 34 322 60 352 1.03e-23 100
MS.gene048486.t1 MTR_3g045230 27.547 265 173 8 34 288 56 311 1.29e-23 99.8
MS.gene048486.t1 MTR_5g065010 27.219 338 193 15 2 307 11 327 1.36e-23 99.8
MS.gene048486.t1 MTR_5g024940 25.347 288 171 6 31 303 3 261 1.91e-23 98.2
MS.gene048486.t1 MTR_3g040410 27.703 296 174 11 34 302 6 288 2.29e-23 98.6
MS.gene048486.t1 MTR_7g056347 24.818 274 179 6 34 292 67 328 3.55e-23 99.0
MS.gene048486.t1 MTR_7g078010 29.210 291 152 11 34 295 67 332 7.01e-23 98.2
MS.gene048486.t1 MTR_2g072910 29.388 245 141 8 25 252 46 275 7.14e-23 96.3
MS.gene048486.t1 MTR_8g074050 27.113 284 181 6 34 298 52 328 8.11e-23 97.4
MS.gene048486.t1 MTR_4g119410 28.070 285 181 8 25 295 58 332 8.21e-23 97.8
MS.gene048486.t1 MTR_1g043810 28.519 270 157 11 30 279 50 303 8.58e-23 97.4
MS.gene048486.t1 MTR_5g025060 26.000 300 169 10 32 315 4 266 8.75e-23 96.3
MS.gene048486.t1 MTR_2g069010 25.581 258 171 5 34 279 69 317 8.86e-23 97.8
MS.gene048486.t1 MTR_8g006930 28.223 287 160 9 34 295 67 332 9.81e-23 97.8
MS.gene048486.t1 MTR_2g069060 27.706 231 146 6 34 252 27 248 1.01e-22 95.5
MS.gene048486.t1 MTR_4g132770 42.718 103 56 1 190 289 28 130 1.34e-22 92.8
MS.gene048486.t1 MTR_2g033270 26.183 317 173 15 24 302 6 299 1.45e-22 96.3
MS.gene048486.t1 MTR_3g058610 24.919 309 194 11 31 311 36 334 2.51e-22 96.3
MS.gene048486.t1 MTR_4g096840 27.152 302 171 12 34 302 29 314 2.88e-22 95.9
MS.gene048486.t1 MTR_8g469400 24.679 312 203 9 23 325 56 344 2.91e-22 96.3
MS.gene048486.t1 MTR_0056s0160 33.588 131 84 1 152 279 51 181 3.80e-22 93.6
MS.gene048486.t1 MTR_3g043900 25.260 289 184 9 34 301 56 333 6.27e-22 95.1
MS.gene048486.t1 MTR_4g123020 25.243 309 183 10 25 302 11 302 6.50e-22 94.7
MS.gene048486.t1 MTR_7g102820 27.208 283 171 9 15 277 59 326 6.82e-22 95.5
MS.gene048486.t1 MTR_5g032870 27.941 272 176 6 32 288 36 302 7.62e-22 94.7
MS.gene048486.t1 MTR_8g075890 24.923 325 209 12 10 310 20 333 2.16e-21 93.6
MS.gene048486.t1 MTR_8g074070 26.241 282 167 6 34 298 52 309 3.23e-21 92.8
MS.gene048486.t1 MTR_1g070085 24.281 313 206 7 18 307 21 325 3.46e-21 92.8
MS.gene048486.t1 MTR_1g070085 24.281 313 206 7 18 307 21 325 3.46e-21 92.8
MS.gene048486.t1 MTR_3g117485 24.723 271 187 5 43 302 68 332 5.74e-21 92.4
MS.gene048486.t1 MTR_8g009080 27.488 211 133 7 45 248 114 311 6.21e-21 92.0
MS.gene048486.t1 MTR_1g048940 25.000 300 186 9 18 292 25 310 6.23e-21 92.4
MS.gene048486.t1 MTR_2g437380 25.591 254 156 9 69 301 1 242 6.56e-21 90.9
MS.gene048486.t1 MTR_7g056353 28.571 238 156 6 62 295 79 306 1.07e-20 92.8
MS.gene048486.t1 MTR_0009s0050 32.168 143 94 1 149 288 65 207 1.10e-20 90.1
MS.gene048486.t1 MTR_0009s0050 32.168 143 94 1 149 288 65 207 1.32e-20 89.7
MS.gene048486.t1 MTR_1g086550 25.407 307 179 14 34 302 20 314 2.29e-20 90.5
MS.gene048486.t1 MTR_7g105070 27.863 262 162 9 34 280 59 308 2.68e-20 90.5
MS.gene048486.t1 MTR_3g026150 25.333 300 183 9 31 301 54 341 3.74e-20 90.1
MS.gene048486.t1 MTR_1g032140 26.616 263 168 8 34 283 66 316 4.50e-20 90.1
MS.gene048486.t1 MTR_8g075830 24.679 312 189 13 31 310 36 333 5.20e-20 89.7
MS.gene048486.t1 MTR_7g016080 24.834 302 183 11 14 292 13 293 6.31e-20 89.0
MS.gene048486.t1 MTR_8g093980 22.977 309 189 7 34 307 59 353 9.14e-20 89.4
MS.gene048486.t1 MTR_3g108520 27.157 313 161 11 34 301 7 297 2.29e-19 87.4
MS.gene048486.t1 MTR_3g117485 24.790 238 167 4 54 285 7 238 2.69e-19 86.7
MS.gene048486.t1 MTR_7g081710 24.832 298 185 9 31 301 46 331 3.89e-19 87.0
MS.gene048486.t1 MTR_4g100600 29.078 282 161 12 34 289 9 277 1.19e-18 85.5
MS.gene048486.t1 MTR_0009s0050 33.600 125 80 1 167 288 1 125 1.33e-18 82.4
MS.gene048486.t1 MTR_8g009180 32.222 180 101 6 119 279 63 240 2.40e-18 84.0
MS.gene048486.t1 MTR_1g043775 28.512 242 138 10 30 252 50 275 3.05e-18 84.0
MS.gene048486.t1 MTR_8g041600 25.571 219 135 6 45 252 90 291 4.04e-18 83.6
MS.gene048486.t1 MTR_7g056393 26.619 278 176 8 34 295 67 332 4.90e-18 84.3
MS.gene048486.t1 MTR_1g032220 25.407 307 192 11 34 314 73 368 5.78e-18 84.0
MS.gene048486.t1 MTR_5g011250 26.592 267 168 10 36 288 61 313 7.12e-18 83.6
MS.gene048486.t1 MTR_1g062110 26.582 237 148 7 34 252 66 294 1.34e-17 82.4
MS.gene048486.t1 MTR_1g043770 26.357 258 157 10 7 252 37 273 7.53e-17 80.1
MS.gene048486.t1 MTR_1g043810 26.860 242 142 10 30 252 50 275 1.35e-16 79.7
MS.gene048486.t1 MTR_1g070135 23.913 230 157 6 34 252 38 260 2.40e-16 78.6
MS.gene048486.t1 MTR_1g070085 23.881 201 138 4 121 307 48 247 6.94e-16 76.6
MS.gene048486.t1 MTR_0009s0400 39.130 92 53 1 194 282 4 95 7.60e-16 73.9
MS.gene048486.t1 MTR_1g043840 37.143 140 74 5 148 279 51 184 9.21e-16 77.4
MS.gene048486.t1 MTR_1g070110 36.134 119 62 3 206 314 110 224 1.00e-15 75.9
MS.gene048486.t1 MTR_7g078010 27.530 247 126 10 34 252 67 288 1.27e-15 76.6
MS.gene048486.t1 MTR_2g068840 24.354 271 175 7 30 282 54 312 1.52e-15 77.0
MS.gene048486.t1 MTR_1g032250 24.521 261 176 8 34 283 73 323 1.77e-15 76.6
MS.gene048486.t1 MTR_4g115990 23.986 296 182 8 33 311 45 314 3.47e-15 75.5
MS.gene048486.t1 MTR_1g070100 23.182 220 138 5 121 326 44 246 4.93e-15 74.3
MS.gene048486.t1 MTR_2g068800 27.059 255 145 10 30 270 54 281 5.52e-15 74.3
MS.gene048486.t1 MTR_4g011720 26.384 307 174 10 29 301 4 292 4.64e-14 72.0
MS.gene048486.t1 MTR_3g026150 26.471 170 112 3 145 301 69 238 5.61e-14 71.2
MS.gene048486.t1 MTR_4g100590 25.899 278 170 12 34 289 9 272 4.36e-13 69.3
MS.gene048486.t1 MTR_4g011690 23.411 299 194 10 29 301 4 293 6.88e-13 68.6
MS.gene048486.t1 MTR_6g035160 35.294 119 67 4 192 301 37 154 1.30e-12 65.9
MS.gene048486.t1 MTR_1g027290 24.113 282 170 12 47 300 52 317 8.93e-12 65.5
MS.gene048486.t1 MTR_3g026150 24.481 241 151 7 31 252 54 282 1.37e-11 64.7
MS.gene048486.t1 MTR_3g040440 36.364 77 46 2 191 265 3 78 6.60e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene048486.t1 AT5G58660 50.286 350 145 10 1 324 1 347 1.13e-110 326
MS.gene048486.t1 AT3G47190 44.311 334 172 8 1 324 1 330 8.56e-92 277
MS.gene048486.t1 AT5G58660 47.826 276 116 9 1 251 1 273 7.67e-77 237
MS.gene048486.t1 AT4G21200 35.443 316 167 11 26 321 35 333 5.01e-55 182
MS.gene048486.t1 AT1G50960 31.270 307 180 7 34 321 40 334 1.23e-46 160
MS.gene048486.t1 AT4G10500 34.815 270 154 8 32 288 42 302 6.59e-41 146
MS.gene048486.t1 AT3G11180 33.226 310 167 12 24 302 79 379 1.91e-39 143
MS.gene048486.t1 AT5G05600 31.650 297 167 10 34 302 62 350 1.96e-39 143
MS.gene048486.t1 AT3G11180 33.226 310 167 12 24 302 79 379 2.32e-39 143
MS.gene048486.t1 AT4G10490 31.633 294 169 7 32 301 40 325 3.50e-39 141
MS.gene048486.t1 AT1G78550 31.047 277 167 6 31 292 50 317 9.98e-38 138
MS.gene048486.t1 AT1G12010 28.966 290 171 8 34 301 7 283 5.18e-37 135
MS.gene048486.t1 AT1G77330 30.068 296 166 11 34 301 3 285 3.57e-35 130
MS.gene048486.t1 AT3G19010 28.035 346 181 12 1 301 1 323 3.98e-35 130
MS.gene048486.t1 AT3G19010 28.035 346 181 12 1 301 1 323 3.98e-35 130
MS.gene048486.t1 AT2G38240 28.803 309 184 9 34 316 48 346 4.72e-35 130
MS.gene048486.t1 AT3G55970 30.702 342 180 13 9 315 32 351 1.65e-34 129
MS.gene048486.t1 AT1G62380 26.441 295 184 6 28 301 1 283 2.92e-34 128
MS.gene048486.t1 AT1G05010 30.147 272 162 9 32 288 2 260 9.35e-34 126
MS.gene048486.t1 AT5G08640 29.452 292 173 9 34 301 43 325 1.01e-33 127
MS.gene048486.t1 AT5G08640 29.452 292 173 9 34 301 43 325 1.01e-33 127
MS.gene048486.t1 AT5G24530 27.682 289 182 6 34 301 38 320 3.39e-33 125
MS.gene048486.t1 AT1G15550 29.966 297 163 11 34 301 57 337 4.32e-33 125
MS.gene048486.t1 AT1G17020 32.197 264 151 9 34 279 53 306 4.46e-33 125
MS.gene048486.t1 AT4G25420 27.463 335 190 10 23 312 40 366 4.61e-33 126
MS.gene048486.t1 AT1G80330 30.508 295 172 10 32 301 47 333 2.75e-32 123
MS.gene048486.t1 AT1G17010 31.970 269 156 9 34 285 54 312 3.64e-32 123
MS.gene048486.t1 AT3G19000 30.225 311 166 10 31 301 29 328 1.42e-31 121
MS.gene048486.t1 AT5G43450 26.911 327 180 11 18 303 36 344 5.67e-31 120
MS.gene048486.t1 AT5G43440 27.393 303 171 9 15 295 49 324 8.01e-31 119
MS.gene048486.t1 AT4G25310 32.129 249 141 9 43 279 69 301 4.01e-30 117
MS.gene048486.t1 AT5G20400 30.496 282 169 8 25 289 37 308 4.80e-30 117
MS.gene048486.t1 AT5G51810 28.387 310 183 10 34 312 63 364 7.04e-30 117
MS.gene048486.t1 AT1G04350 28.214 280 175 7 18 279 34 305 1.38e-29 116
MS.gene048486.t1 AT5G59540 27.273 308 181 10 24 301 52 346 1.85e-29 116
MS.gene048486.t1 AT4G25300 30.153 262 158 8 34 279 52 304 5.34e-29 114
MS.gene048486.t1 AT1G78550 29.218 243 156 5 57 292 6 239 6.04e-29 112
MS.gene048486.t1 AT5G54000 30.795 302 173 9 7 289 25 309 6.09e-29 114
MS.gene048486.t1 AT1G49390 30.584 291 168 8 13 285 30 304 6.50e-29 114
MS.gene048486.t1 AT1G06620 29.123 285 177 9 8 279 39 311 1.12e-28 114
MS.gene048486.t1 AT3G19010 27.246 334 169 13 1 301 1 293 1.58e-28 112
MS.gene048486.t1 AT2G34555 31.071 280 162 11 20 282 13 278 1.95e-28 112
MS.gene048486.t1 AT1G80340 30.258 271 162 9 34 289 50 308 2.11e-28 112
MS.gene048486.t1 AT5G20550 31.752 274 160 8 34 289 45 309 4.57e-28 112
MS.gene048486.t1 AT5G59530 28.214 280 155 8 50 301 83 344 5.47e-28 112
MS.gene048486.t1 AT2G19590 30.370 270 158 9 34 288 11 265 6.11e-28 110
MS.gene048486.t1 AT5G63600 28.947 266 166 7 34 288 33 286 6.85e-28 111
MS.gene048486.t1 AT1G55290 30.545 275 168 10 27 288 54 318 7.46e-28 111
MS.gene048486.t1 AT4G16330 26.621 293 176 8 30 300 63 338 3.51e-27 109
MS.gene048486.t1 AT4G23340 28.912 294 171 12 50 319 30 309 4.35e-27 108
MS.gene048486.t1 AT5G63600 29.213 267 165 8 34 288 33 287 1.14e-26 107
MS.gene048486.t1 AT3G21420 27.473 273 173 6 34 289 55 319 1.15e-26 108
MS.gene048486.t1 AT1G78440 28.904 301 167 12 34 302 18 303 1.22e-26 107
MS.gene048486.t1 AT3G19000 29.615 260 142 8 31 260 29 277 1.43e-26 106
MS.gene048486.t1 AT5G05600 30.932 236 137 9 34 251 62 289 3.50e-26 105
MS.gene048486.t1 AT2G36690 28.723 282 161 9 34 292 61 325 4.48e-26 107
MS.gene048486.t1 AT2G36690 28.723 282 161 9 34 292 61 325 4.48e-26 107
MS.gene048486.t1 AT1G04380 27.885 312 187 11 18 301 24 325 5.71e-26 106
MS.gene048486.t1 AT3G19010 27.586 290 152 11 1 255 1 267 1.29e-25 104
MS.gene048486.t1 AT1G06650 27.097 310 186 10 34 318 64 358 4.22e-25 104
MS.gene048486.t1 AT1G30040 26.000 300 182 11 31 303 28 314 5.19e-25 103
MS.gene048486.t1 AT1G06640 27.653 311 185 11 34 319 64 359 7.83e-25 103
MS.gene048486.t1 AT1G14130 29.693 293 165 11 34 302 9 284 1.01e-24 102
MS.gene048486.t1 AT5G54000 31.799 239 142 7 61 289 2 229 1.09e-24 101
MS.gene048486.t1 AT3G13610 28.873 284 181 10 17 288 44 318 1.25e-24 102
MS.gene048486.t1 AT1G44090 25.575 348 210 10 1 310 27 363 4.33e-24 101
MS.gene048486.t1 AT5G07200 25.648 347 206 13 10 312 29 367 4.61e-24 101
MS.gene048486.t1 AT1G03410 27.119 295 179 9 34 301 57 342 5.04e-24 101
MS.gene048486.t1 AT1G49390 30.769 234 143 6 61 285 2 225 9.15e-24 98.6
MS.gene048486.t1 AT1G03410 27.119 295 179 9 34 301 94 379 1.09e-23 100
MS.gene048486.t1 AT4G22880 27.562 283 171 9 29 288 42 313 1.15e-23 100
MS.gene048486.t1 AT4G22880 27.562 283 171 9 29 288 42 313 1.15e-23 100
MS.gene048486.t1 AT4G22880 27.562 283 171 9 29 288 42 313 1.15e-23 100
MS.gene048486.t1 AT5G63595 28.777 278 161 8 21 288 12 262 1.24e-23 98.6
MS.gene048486.t1 AT2G30830 29.098 244 157 6 50 286 80 314 2.05e-23 99.4
MS.gene048486.t1 AT3G55970 29.368 269 147 11 9 252 32 282 6.44e-23 97.1
MS.gene048486.t1 AT2G44800 26.733 303 167 11 34 301 52 334 6.48e-23 97.8
MS.gene048486.t1 AT4G21690 27.055 292 184 8 31 301 44 327 8.39e-23 97.4
MS.gene048486.t1 AT5G63590 27.551 294 179 11 34 302 14 298 1.14e-22 96.7
MS.gene048486.t1 AT5G43440 26.136 264 148 8 15 256 49 287 1.71e-22 95.5
MS.gene048486.t1 AT4G25310 28.980 245 126 8 43 279 69 273 2.05e-22 96.3
MS.gene048486.t1 AT1G06645 28.244 262 158 9 34 279 77 324 2.22e-22 96.7
MS.gene048486.t1 AT1G03400 26.897 290 177 9 34 301 56 332 2.58e-22 96.3
MS.gene048486.t1 AT1G60980 25.333 300 184 7 34 301 57 348 4.50e-22 95.9
MS.gene048486.t1 AT1G06620 28.016 257 161 8 8 252 39 283 5.98e-22 94.0
MS.gene048486.t1 AT5G59540 26.423 246 151 8 24 252 52 284 7.28e-22 94.0
MS.gene048486.t1 AT5G43450 24.535 269 157 7 18 258 36 286 8.32e-22 93.6
MS.gene048486.t1 AT2G19590 29.796 245 149 8 52 288 21 250 1.31e-21 93.2
MS.gene048486.t1 AT5G43935 27.341 267 156 9 34 288 19 259 1.59e-21 93.2
MS.gene048486.t1 AT3G61400 27.660 329 183 15 18 303 37 353 3.32e-21 93.2
MS.gene048486.t1 AT3G60290 25.667 300 169 11 34 301 52 329 4.00e-21 92.8
MS.gene048486.t1 AT3G51240 24.332 337 215 12 10 323 19 338 4.25e-21 92.8
MS.gene048486.t1 AT5G51810 28.270 237 145 8 34 253 63 291 2.49e-20 89.7
MS.gene048486.t1 AT4G25420 24.906 265 160 8 23 256 40 296 4.35e-20 89.0
MS.gene048486.t1 AT1G06640 27.686 242 153 6 34 262 64 296 8.07e-20 89.0
MS.gene048486.t1 AT2G30840 25.941 239 163 6 49 282 83 312 3.80e-19 87.4
MS.gene048486.t1 AT1G06650 27.273 231 146 6 34 251 64 285 5.07e-19 86.3
MS.gene048486.t1 AT2G25450 27.615 239 159 6 47 280 77 306 7.56e-19 86.7
MS.gene048486.t1 AT5G51310 25.292 257 155 8 46 279 21 263 2.14e-18 84.7
MS.gene048486.t1 AT1G04380 26.587 252 160 7 18 254 24 265 2.37e-18 84.0
MS.gene048486.t1 AT3G12900 25.758 264 176 8 29 282 54 307 5.02e-18 84.0
MS.gene048486.t1 AT1G06640 27.511 229 144 6 34 249 64 283 6.59e-18 82.8
MS.gene048486.t1 AT4G23340 29.897 194 110 8 149 319 1 191 1.49e-17 80.1
MS.gene048486.t1 AT1G14120 26.882 279 157 8 34 290 8 261 1.72e-17 82.0
MS.gene048486.t1 AT1G14120 26.882 279 157 8 34 290 8 261 1.72e-17 82.0
MS.gene048486.t1 AT1G14120 26.882 279 157 8 34 290 8 261 1.72e-17 82.0
MS.gene048486.t1 AT4G16330 29.560 159 107 3 146 300 75 232 1.93e-16 78.2
MS.gene048486.t1 AT3G50210 23.048 269 173 10 45 289 36 294 5.99e-16 77.8
MS.gene048486.t1 AT3G50210 23.048 269 173 10 45 289 36 294 5.99e-16 77.8
MS.gene048486.t1 AT3G50210 23.048 269 173 10 45 289 36 294 5.99e-16 77.8
MS.gene048486.t1 AT1G52800 26.007 273 155 10 49 296 37 287 6.96e-16 77.4
MS.gene048486.t1 AT1G47990 22.930 314 189 11 27 305 8 303 7.59e-16 77.4
MS.gene048486.t1 AT4G25300 31.818 132 86 2 152 279 79 210 9.05e-16 76.3
MS.gene048486.t1 AT2G30840 25.523 239 158 7 49 282 83 306 1.11e-15 77.4
MS.gene048486.t1 AT1G52820 22.909 275 187 7 42 301 31 295 2.12e-15 76.3
MS.gene048486.t1 AT5G63580 27.155 232 146 7 34 252 19 240 3.34e-15 74.7
MS.gene048486.t1 AT3G46500 25.086 291 185 11 25 289 3 286 6.24e-15 74.7
MS.gene048486.t1 AT5G07480 22.769 325 192 13 22 301 23 333 7.04e-15 75.1
MS.gene048486.t1 AT5G12270 25.517 290 184 11 18 289 41 316 7.29e-15 75.1
MS.gene048486.t1 AT5G63580 26.957 230 145 7 34 250 19 238 9.08e-15 73.2
MS.gene048486.t1 AT3G51240 26.738 187 116 6 151 323 75 254 1.15e-14 73.6
MS.gene048486.t1 AT2G30840 24.155 207 145 4 49 252 83 280 1.99e-13 70.1
MS.gene048486.t1 AT4G03070 23.297 279 170 9 49 301 40 300 1.58e-11 64.7

Find 80 sgRNAs with CRISPR-Local

Find 230 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGAATTCATTGTAAGTAAA+TGG 0.199825 3.3:-52050394 None:intergenic
AAAGCCCTATCAAATACTTT+TGG 0.232889 3.3:+52046435 MS.gene048486:CDS
AGTTGTTCCAAAAGGGTTAT+TGG 0.236584 3.3:-52046350 None:intergenic
ATATGCTACTTTGTATTTCC+TGG 0.273322 3.3:+52050337 MS.gene048486:CDS
CAAAATATCAATTGGGTTGA+AGG 0.317985 3.3:+52046506 MS.gene048486:CDS
ACCCCTGCCCTAACTCCATC+TGG 0.318194 3.3:+52046461 MS.gene048486:CDS
TCCACCCACTGATGTTGGTT+GGG 0.318462 3.3:+52049028 MS.gene048486:CDS
TGGTGTTCCAATAACCCTTT+TGG 0.323371 3.3:+52046343 MS.gene048486:CDS
GAGTCTTCAATTATGGCATT+TGG 0.324169 3.3:-52046227 None:intergenic
AGGATCTGAGTCTTCAATTA+TGG 0.344621 3.3:-52046234 None:intergenic
AAGGTCCTCAAAATATCAAT+TGG 0.347317 3.3:+52046498 MS.gene048486:CDS
TAGCTGTCCCAGATGGAGTT+AGG 0.348011 3.3:-52046469 None:intergenic
AGTCCACTCACATGGTCATC+TGG 0.350321 3.3:-52049095 None:intergenic
GAAATAAAGTAGGGCTTTCA+AGG 0.356516 3.3:+52050449 MS.gene048486:CDS
AGTCTTCAATTATGGCATTT+GGG 0.361644 3.3:-52046226 None:intergenic
GGACAAAGAAAATAGTTGTT+TGG 0.363936 3.3:-52046384 None:intergenic
GTACCCCAAAAGTATTTGAT+AGG 0.370868 3.3:-52046440 None:intergenic
TTATGGCATTTGGGACATAA+AGG 0.381694 3.3:-52046217 None:intergenic
GGATGAGGCTTGCAAGGAAT+GGG 0.382366 3.3:+52046298 MS.gene048486:CDS
TTAAGATCTATGATTGGAAT+AGG 0.398603 3.3:-52046254 None:intergenic
AATCTTGAAGTTGTTCCAAA+AGG 0.399640 3.3:-52046358 None:intergenic
TTGTAGCAATTCTTGAAAGA+TGG 0.402223 3.3:-52048908 None:intergenic
AAAACTCTTGGAAATAAAGT+AGG 0.412345 3.3:+52050439 MS.gene048486:CDS
CACTGATGTTGGTTGGGGCA+TGG 0.426417 3.3:+52049034 MS.gene048486:CDS
CTATTCCGTTTGGCTAATCA+TGG 0.427105 3.3:+52046323 MS.gene048486:CDS
TTGTTGTGTTGGCGGAGAAT+TGG 0.428074 3.3:-52046182 None:intergenic
GTCTTCTTCACAATTAGCCT+TGG 0.435504 3.3:-52050483 None:intergenic
TTCCTTCACTCGAGTCCATC+AGG 0.436361 3.3:+52046573 MS.gene048486:CDS
CAACAAGACATCAAAACTCT+TGG 0.439073 3.3:+52050427 MS.gene048486:CDS
AAGCACTTAAGATCTATGAT+TGG 0.444046 3.3:-52046260 None:intergenic
CCACCCACTGATGTTGGTTG+GGG 0.459100 3.3:+52049029 MS.gene048486:CDS
TGTAGCAATTCTTGAAAGAT+GGG 0.463737 3.3:-52048907 None:intergenic
ATCCACCCACTGATGTTGGT+TGG 0.465205 3.3:+52049027 MS.gene048486:CDS
TACAACTTTATTTGAAGCAA+TGG 0.466551 3.3:+52048926 MS.gene048486:CDS
GTGGTTGGTTGTTGTGTTGG+CGG 0.466591 3.3:-52046190 None:intergenic
TTTGTGGTTGGTTGTTGTGT+TGG 0.467680 3.3:-52046193 None:intergenic
TGGATGAGGCTTGCAAGGAA+TGG 0.468427 3.3:+52046297 MS.gene048486:CDS
ATCTTGAAGTTGTTCCAAAA+GGG 0.472517 3.3:-52046357 None:intergenic
ACAATCAATGTGTTGGAAGC+TGG 0.474366 3.3:-52049155 None:intergenic
TTGTGTTGGCGGAGAATTGG+AGG 0.487468 3.3:-52046179 None:intergenic
ATGGTCATCTGGGTTCAGTA+TGG 0.488243 3.3:-52049084 None:intergenic
GGAATGGGGTCTATTCCGTT+TGG 0.488647 3.3:+52046313 MS.gene048486:CDS
TGCTTCTTGTTTAGACTCAA+AGG 0.494818 3.3:-52046405 None:intergenic
GTCCCAGATGGAGTTAGGGC+AGG 0.496556 3.3:-52046464 None:intergenic
AAATTTGGATGAGGCTTGCA+AGG 0.500207 3.3:+52046292 MS.gene048486:CDS
GTCCACTCACATGGTCATCT+GGG 0.515908 3.3:-52049094 None:intergenic
AGGTCCTCAAAATATCAATT+GGG 0.518990 3.3:+52046499 MS.gene048486:CDS
AGCTGTCCCAGATGGAGTTA+GGG 0.521188 3.3:-52046468 None:intergenic
TCTGGGACAGCTATAGCAAA+AGG 0.524766 3.3:+52046479 MS.gene048486:CDS
AAACTCTTGGAAATAAAGTA+GGG 0.529119 3.3:+52050440 MS.gene048486:CDS
AACACATTGATTGTCAACCT+TGG 0.531876 3.3:+52049164 MS.gene048486:CDS
CGTTATCCACCCACTGATGT+TGG 0.532079 3.3:+52049023 MS.gene048486:CDS
AAGTTCTCAAAGATGATCAA+TGG 0.538791 3.3:+52049120 MS.gene048486:CDS
TCCCAGATGGAGTTAGGGCA+GGG 0.550094 3.3:-52046463 None:intergenic
CGAGTGAAGGAAGTTGGTGT+TGG 0.551142 3.3:-52046562 None:intergenic
GAACACCATGATTAGCCAAA+CGG 0.559459 3.3:-52046328 None:intergenic
TTTGCTATAGCTGTCCCAGA+TGG 0.561252 3.3:-52046476 None:intergenic
TACCCCAAAAGTATTTGATA+GGG 0.565928 3.3:-52046439 None:intergenic
AGGTAGAGAAAGATTTAGAG+AGG 0.566840 3.3:+52050308 MS.gene048486:CDS
CCCCTGCCCTAACTCCATCT+GGG 0.570314 3.3:+52046462 MS.gene048486:CDS
TCAATCACAACGTCTTCACC+AGG 0.577291 3.3:-52050355 None:intergenic
AAGGTTGACAATCAATGTGT+TGG 0.579083 3.3:-52049162 None:intergenic
CAACCTTGGTGACATGATGC+AGG 0.582770 3.3:+52049178 MS.gene048486:CDS
TTGGCGGAGAATTGGAGGGT+AGG 0.589074 3.3:-52046174 None:intergenic
TACCTGATGGACTCGAGTGA+AGG 0.596137 3.3:-52046575 None:intergenic
TGGACTCGAGTGAAGGAAGT+TGG 0.605861 3.3:-52046568 None:intergenic
CCCAGATGGAGTTAGGGCAG+GGG 0.606113 3.3:-52046462 None:intergenic
ATGCCCCAACCAACATCAGT+GGG 0.610403 3.3:-52049032 None:intergenic
GATGAGGCTTGCAAGGAATG+GGG 0.613568 3.3:+52046299 MS.gene048486:CDS
TCAAGGTTTCAGAAGAACCA+AGG 0.622530 3.3:+52050466 MS.gene048486:CDS
TGATGTTGGTTGGGGCATGG+AGG 0.624574 3.3:+52049037 MS.gene048486:CDS
GAACTTGAAGTCCACTCACA+TGG 0.631164 3.3:-52049103 None:intergenic
GAGTGTGTCACATAGAGTGA+AGG 0.631791 3.3:+52050288 MS.gene048486:CDS
CATGCCCCAACCAACATCAG+TGG 0.640789 3.3:-52049033 None:intergenic
TGTGTTGGCGGAGAATTGGA+GGG 0.645411 3.3:-52046178 None:intergenic
CCCCAACCAACATCAGTGGG+TGG 0.649461 3.3:-52049029 None:intergenic
TCATATTTATCAGAAAACAC+TGG 0.667847 3.3:+52048984 MS.gene048486:CDS
AACCCAGATGACCATGTGAG+TGG 0.675932 3.3:+52049092 MS.gene048486:CDS
AGACCTGCATCATGTCACCA+AGG 0.690147 3.3:-52049181 None:intergenic
AAGTGAGAGAGTTGACACAA+TGG 0.709390 3.3:-52046539 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTATAACATAGATTTA+TGG + chr3.3:52047152-52047171 MS.gene048486:intron 10.0%
!! AAATTATAACATAGATTTAT+GGG + chr3.3:52047153-52047172 MS.gene048486:intron 10.0%
!! AATAATAATAAACTAACAAA+TGG + chr3.3:52046851-52046870 MS.gene048486:intron 10.0%
!! ATGAACAATTATTTATTTAT+AGG - chr3.3:52048217-52048236 None:intergenic 10.0%
!! ATTATTTAAATCTATTCTAA+TGG + chr3.3:52048841-52048860 MS.gene048486:intron 10.0%
!! TGATTAATTTAACATATAAT+TGG + chr3.3:52048616-52048635 MS.gene048486:intron 10.0%
!! TTAGAATAGATTTAAATAAT+CGG - chr3.3:52048841-52048860 None:intergenic 10.0%
!!! ACAAAAGTATAAATTAAAAT+TGG - chr3.3:52050125-52050144 None:intergenic 10.0%
!! AAAAATTAAATAAGTGCATA+GGG - chr3.3:52050053-52050072 None:intergenic 15.0%
!! AAAACAATTGAAAAGAAAAT+TGG + chr3.3:52048153-52048172 MS.gene048486:intron 15.0%
!! ACTTTCCTATAATAAAAAAA+AGG + chr3.3:52048256-52048275 MS.gene048486:intron 15.0%
!! CTTTCAAAAAAAAAAAAAGT+AGG + chr3.3:52048343-52048362 MS.gene048486:intron 15.0%
!! TAAAAATTAAATAAGTGCAT+AGG - chr3.3:52050054-52050073 None:intergenic 15.0%
!! TCATTACTCATAATTTAATT+TGG + chr3.3:52049214-52049233 MS.gene048486:intron 15.0%
!!! AAGGTATTATTTTTTTTTTG+AGG + chr3.3:52046654-52046673 MS.gene048486:intron 15.0%
!!! AATCAAAATCTCTATTTTTT+GGG - chr3.3:52049301-52049320 None:intergenic 15.0%
!!! ACTTTTTTCTTTGTAAAATA+TGG + chr3.3:52049456-52049475 MS.gene048486:intron 15.0%
!!! AGTGTATCTTTTTATTTAAT+AGG + chr3.3:52047443-52047462 MS.gene048486:intron 15.0%
!!! ATATTTTACAAAGAAAAAAG+TGG - chr3.3:52049457-52049476 None:intergenic 15.0%
!!! ATTTTCTTTTCAATTGTTTT+TGG - chr3.3:52048153-52048172 None:intergenic 15.0%
!!! TAATATTTGAGTGTTATTTT+TGG - chr3.3:52049970-52049989 None:intergenic 15.0%
!!! TATTATTTCATCTTTTTTCA+TGG + chr3.3:52048642-52048661 MS.gene048486:intron 15.0%
!!! TCTATCTTCAAATATTTTTT+TGG - chr3.3:52048369-52048388 None:intergenic 15.0%
!!! TGTTAAATTAATCATTTTTC+AGG - chr3.3:52048610-52048629 None:intergenic 15.0%
!!! TTGTCTTTTCATTTTTTTTA+AGG - chr3.3:52047727-52047746 None:intergenic 15.0%
!!! TTGTGTGTATAAATTTTTAA+TGG + chr3.3:52048087-52048106 MS.gene048486:intron 15.0%
!!! TTTAAGTTTTTTATGTTATG+TGG + chr3.3:52048405-52048424 MS.gene048486:intron 15.0%
!!! TTTGTCCTTTTTTTTATTAT+AGG - chr3.3:52048264-52048283 None:intergenic 15.0%
!!! TTTTCACTAAATTATCAAAT+TGG - chr3.3:52046886-52046905 None:intergenic 15.0%
!!! TTTTTTTATAGATGATGAAA+AGG - chr3.3:52048119-52048138 None:intergenic 15.0%
!! AAAAAATGAAAAGACAAACA+TGG + chr3.3:52047730-52047749 MS.gene048486:intron 20.0%
!! AAAATATAAGACACAAAAGA+TGG - chr3.3:52047110-52047129 None:intergenic 20.0%
!! AAAATTAAATAAGTGCATAG+GGG - chr3.3:52050052-52050071 None:intergenic 20.0%
!! ACTTTATCTCTTTATTGTTA+TGG + chr3.3:52049417-52049436 MS.gene048486:intron 20.0%
!! AGTGAAAAAAACTAATTTGA+AGG + chr3.3:52046898-52046917 MS.gene048486:intron 20.0%
!! ATTACAAGTCTTAATATTAG+AGG + chr3.3:52049986-52050005 MS.gene048486:intron 20.0%
!! ATTTAGTCTGAAAATAATTG+TGG + chr3.3:52047043-52047062 MS.gene048486:intron 20.0%
!! CATGATTGAATCAAATATAA+AGG - chr3.3:52049934-52049953 None:intergenic 20.0%
!! GTTGAAATAAGAATTGTAAA+TGG - chr3.3:52048000-52048019 None:intergenic 20.0%
!! TGAGTTTAATTATGTTAACA+GGG - chr3.3:52047557-52047576 None:intergenic 20.0%
!! TTATATTTGATTCAATCATG+AGG + chr3.3:52049934-52049953 MS.gene048486:intron 20.0%
!! TTCTGAATGAAAATGAAATT+TGG - chr3.3:52047673-52047692 None:intergenic 20.0%
!!! ACAATTTCGACAATTTTTAT+CGG - chr3.3:52048022-52048041 None:intergenic 20.0%
!!! ATAACACTTCTCTTTTTTTA+AGG + chr3.3:52049514-52049533 MS.gene048486:intron 20.0%
!!! ATCATTACTCTAAGTTTTAA+TGG - chr3.3:52049658-52049677 None:intergenic 20.0%
!!! ATCTTTTGTGTCTTATATTT+TGG + chr3.3:52047109-52047128 MS.gene048486:intron 20.0%
!!! ATTAAAATTCATTTTCTAGC+AGG + chr3.3:52047581-52047600 MS.gene048486:intron 20.0%
!!! ATTACTAAGCAGTATTTTTA+AGG + chr3.3:52047631-52047650 MS.gene048486:intron 20.0%
!!! ATTTATCTTTTGATTTCTGA+TGG - chr3.3:52047363-52047382 None:intergenic 20.0%
!!! CTATTCTAATGGATTTATTT+TGG + chr3.3:52050237-52050256 MS.gene048486:intron 20.0%
!!! CTTTTTATCAAATAGTATAG+CGG + chr3.3:52047497-52047516 MS.gene048486:intron 20.0%
!!! GAATCAAAATCTCTATTTTT+TGG - chr3.3:52049302-52049321 None:intergenic 20.0%
!!! TAATGGATTTATTTTGGTTT+AGG + chr3.3:52050243-52050262 MS.gene048486:intron 20.0%
!!! TCATTACTCTAAGTTTTAAT+GGG - chr3.3:52049657-52049676 None:intergenic 20.0%
!!! TCTTTTGTGTCTTATATTTT+GGG + chr3.3:52047110-52047129 MS.gene048486:intron 20.0%
!!! TGAGACTTCATAAATTTTAA+CGG + chr3.3:52049890-52049909 MS.gene048486:intron 20.0%
!!! TTAGACTTTTATATTAGTCT+TGG + chr3.3:52047869-52047888 MS.gene048486:intron 20.0%
!!! TTGATAGTAAAATATACGTT+CGG - chr3.3:52046767-52046786 None:intergenic 20.0%
! AAAAACAATGGAGAGAAAAA+AGG + chr3.3:52049741-52049760 MS.gene048486:intron 25.0%
! AAAACTCTTGGAAATAAAGT+AGG + chr3.3:52050439-52050458 MS.gene048486:CDS 25.0%
! AAAAGTCTAACATCTTTAAC+CGG - chr3.3:52047859-52047878 None:intergenic 25.0%
! AAACTCTTGGAAATAAAGTA+GGG + chr3.3:52050440-52050459 MS.gene048486:CDS 25.0%
! AAATCTGATAATCCATTTCA+AGG - chr3.3:52047292-52047311 None:intergenic 25.0%
! AAATTAAATAAGTGCATAGG+GGG - chr3.3:52050051-52050070 None:intergenic 25.0%
! AAATTTATACACACAAGTTG+AGG - chr3.3:52048083-52048102 None:intergenic 25.0%
! AATAAGAAGTGAGAAAAACA+AGG - chr3.3:52049717-52049736 None:intergenic 25.0%
! AATTAGAAAGAAGCTATCAT+TGG - chr3.3:52047012-52047031 None:intergenic 25.0%
! ACCATTTCTCAACAATAAAT+AGG + chr3.3:52050184-52050203 MS.gene048486:intron 25.0%
! ATTTGAAGGATTTAGTCAAA+TGG + chr3.3:52046912-52046931 MS.gene048486:intron 25.0%
! CTATCTTCAAAGATATTAAC+AGG - chr3.3:52048320-52048339 None:intergenic 25.0%
! CTGAATTCATTGTAAGTAAA+TGG - chr3.3:52050397-52050416 None:intergenic 25.0%
! GTGAGTTTAATTATGTTAAC+AGG - chr3.3:52047558-52047577 None:intergenic 25.0%
! TAAACTAACAAATGGTCAAT+AGG + chr3.3:52046859-52046878 MS.gene048486:intron 25.0%
! TAACTATGTCTCTATTCTAA+TGG + chr3.3:52050226-52050245 MS.gene048486:intron 25.0%
! TACAAAGAAAAAAGTGGTAT+TGG - chr3.3:52049451-52049470 None:intergenic 25.0%
! TATAACATAGATTTATGGGT+CGG + chr3.3:52047157-52047176 MS.gene048486:intron 25.0%
! TCATATTTATCAGAAAACAC+TGG + chr3.3:52048984-52049003 MS.gene048486:CDS 25.0%
! TCCTATTTATTGTTGAGAAA+TGG - chr3.3:52050188-52050207 None:intergenic 25.0%
! TTAAGATCTATGATTGGAAT+AGG - chr3.3:52046257-52046276 None:intergenic 25.0%
! TTCTTATTGGTCAAAAACAA+TGG + chr3.3:52049729-52049748 MS.gene048486:intron 25.0%
! TTGTTCATTGTAAGAAGAAA+AGG + chr3.3:52048229-52048248 MS.gene048486:intron 25.0%
! TTTATTGTATGTCTCTTTCT+TGG + chr3.3:52047084-52047103 MS.gene048486:intron 25.0%
!! CAAATGTTATCTAAAACAGT+CGG - chr3.3:52047756-52047775 None:intergenic 25.0%
!! TACAACTTTATTTGAAGCAA+TGG + chr3.3:52048926-52048945 MS.gene048486:CDS 25.0%
!! TGTTATTTGAACAACCAATT+TGG - chr3.3:52049500-52049519 None:intergenic 25.0%
!!! ATATACGTTCGGTAATTTTT+TGG - chr3.3:52046756-52046775 None:intergenic 25.0%
!!! GTTAATTTTCTGTTTTTCAG+AGG - chr3.3:52048560-52048579 None:intergenic 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG + chr3.3:52049716-52049735 MS.gene048486:intron 25.0%
!!! TTTTAAGGCATCTCATAAAT+TGG + chr3.3:52047646-52047665 MS.gene048486:intron 25.0%
AAATATCCGTCTCATAGTTA+AGG + chr3.3:52048479-52048498 MS.gene048486:intron 30.0%
AAGCACTTAAGATCTATGAT+TGG - chr3.3:52046263-52046282 None:intergenic 30.0%
AAGGTCCTCAAAATATCAAT+TGG + chr3.3:52046498-52046517 MS.gene048486:CDS 30.0%
AAGTTCTCAAAGATGATCAA+TGG + chr3.3:52049120-52049139 MS.gene048486:CDS 30.0%
AATCTTGAAGTTGTTCCAAA+AGG - chr3.3:52046361-52046380 None:intergenic 30.0%
ACACCAAAACACAATAATCA+CGG + chr3.3:52048578-52048597 MS.gene048486:intron 30.0%
AGAACACAAAAATTTGGATG+AGG + chr3.3:52046283-52046302 MS.gene048486:CDS 30.0%
AGGTCCTCAAAATATCAATT+GGG + chr3.3:52046499-52046518 MS.gene048486:CDS 30.0%
AGTCTGAAAATAATTGTGGA+AGG + chr3.3:52047047-52047066 MS.gene048486:intron 30.0%
AGTCTTCAATTATGGCATTT+GGG - chr3.3:52046229-52046248 None:intergenic 30.0%
ATCTTGAAGTTGTTCCAAAA+GGG - chr3.3:52046360-52046379 None:intergenic 30.0%
CAAATAAGTTGTCACCAAAT+TGG + chr3.3:52049483-52049502 MS.gene048486:intron 30.0%
CTTAACATGAATTTCCACAA+AGG - chr3.3:52047607-52047626 None:intergenic 30.0%
GGACAAAGAAAATAGTTGTT+TGG - chr3.3:52046387-52046406 None:intergenic 30.0%
GTGCTTAGAACACAAAAATT+TGG + chr3.3:52046277-52046296 MS.gene048486:CDS 30.0%
TCAACAAAGTTGTCATCAAA+TGG - chr3.3:52049691-52049710 None:intergenic 30.0%
TGGTCAATAAGACTAACAAA+TGG + chr3.3:52046932-52046951 MS.gene048486:intron 30.0%
TGTAGCAATTCTTGAAAGAT+GGG - chr3.3:52048910-52048929 None:intergenic 30.0%
TTACCTTTGAATCAAGTATG+AGG + chr3.3:52049612-52049631 MS.gene048486:intron 30.0%
TTGTAGCAATTCTTGAAAGA+TGG - chr3.3:52048911-52048930 None:intergenic 30.0%
! AAACCGTGATTATTGTGTTT+TGG - chr3.3:52048584-52048603 None:intergenic 30.0%
! AAAGCCCTATCAAATACTTT+TGG + chr3.3:52046435-52046454 MS.gene048486:CDS 30.0%
! AAGCCCTATCAAATACTTTT+GGG + chr3.3:52046436-52046455 MS.gene048486:CDS 30.0%
! CATTGGATTAGGACTTTAAA+TGG + chr3.3:52048436-52048455 MS.gene048486:intron 30.0%
! GTTATAATTTTCCACATGCA+TGG - chr3.3:52047143-52047162 None:intergenic 30.0%
! TCAACCCAATTGATATTTTG+AGG - chr3.3:52046506-52046525 None:intergenic 30.0%
! TGAGAATGTGACATTTTGTT+TGG + chr3.3:52047206-52047225 MS.gene048486:intron 30.0%
!! ATATGCTACTTTGTATTTCC+TGG + chr3.3:52050337-52050356 MS.gene048486:CDS 30.0%
!! CAAAATATCAATTGGGTTGA+AGG + chr3.3:52046506-52046525 MS.gene048486:CDS 30.0%
!! GTTTTGACCAATTGGATATT+TGG + chr3.3:52047255-52047274 MS.gene048486:intron 30.0%
!! TACCCCAAAAGTATTTGATA+GGG - chr3.3:52046442-52046461 None:intergenic 30.0%
!!! AACCACTTTTTGACAACTTT+TGG - chr3.3:52049813-52049832 None:intergenic 30.0%
AACTAAGGACCATAAAGTTG+AGG + chr3.3:52049549-52049568 MS.gene048486:intron 35.0%
AAGGTTGACAATCAATGTGT+TGG - chr3.3:52049165-52049184 None:intergenic 35.0%
AGGATCTGAGTCTTCAATTA+TGG - chr3.3:52046237-52046256 None:intergenic 35.0%
AGGTAGAGAAAGATTTAGAG+AGG + chr3.3:52050308-52050327 MS.gene048486:CDS 35.0%
AGTTGTTCCAAAAGGGTTAT+TGG - chr3.3:52046353-52046372 None:intergenic 35.0%
CAACAAGACATCAAAACTCT+TGG + chr3.3:52050427-52050446 MS.gene048486:CDS 35.0%
CATTAGTAAAAGCCTTGCAA+AGG - chr3.3:52048877-52048896 None:intergenic 35.0%
GAAATAAAGTAGGGCTTTCA+AGG + chr3.3:52050449-52050468 MS.gene048486:CDS 35.0%
GACTTGAGTGCAGAATATTT+GGG - chr3.3:52048298-52048317 None:intergenic 35.0%
GAGTCTTCAATTATGGCATT+TGG - chr3.3:52046230-52046249 None:intergenic 35.0%
GATTGTGCAAATCCTTGAAA+TGG + chr3.3:52047277-52047296 MS.gene048486:intron 35.0%
GCACAATCCAAATATCCAAT+TGG - chr3.3:52047265-52047284 None:intergenic 35.0%
GTCCAAAAGTTGTCAAAAAG+TGG + chr3.3:52049808-52049827 MS.gene048486:intron 35.0%
GTTATGTGGTTTCTCTACAT+TGG + chr3.3:52048419-52048438 MS.gene048486:intron 35.0%
TATCCAATTGGTCAAAACAC+CGG - chr3.3:52047253-52047272 None:intergenic 35.0%
TCACCTCATACTTGATTCAA+AGG - chr3.3:52049618-52049637 None:intergenic 35.0%
TGGTTTCTCTACATTGGATT+AGG + chr3.3:52048425-52048444 MS.gene048486:intron 35.0%
TTAATGTCCCTTAAACCACT+TGG - chr3.3:52049589-52049608 None:intergenic 35.0%
! AACACATTGATTGTCAACCT+TGG + chr3.3:52049164-52049183 MS.gene048486:CDS 35.0%
! AGCCCTATCAAATACTTTTG+GGG + chr3.3:52046437-52046456 MS.gene048486:CDS 35.0%
! ATACACACAAGTTGAGGAAT+TGG - chr3.3:52048077-52048096 None:intergenic 35.0%
! ATCTTGTTTAAACTGCACGT+TGG - chr3.3:52047327-52047346 None:intergenic 35.0%
! CTTTGCAAGGCTTTTACTAA+TGG + chr3.3:52048875-52048894 MS.gene048486:intron 35.0%
! GCAGAATATTTGGGATTACT+GGG - chr3.3:52048289-52048308 None:intergenic 35.0%
! TGCAGAATATTTGGGATTAC+TGG - chr3.3:52048290-52048309 None:intergenic 35.0%
! TGCTTCTTGTTTAGACTCAA+AGG - chr3.3:52046408-52046427 None:intergenic 35.0%
! TTATGGCATTTGGGACATAA+AGG - chr3.3:52046220-52046239 None:intergenic 35.0%
!! AGAAAAAAGTGGTATTGGCA+CGG - chr3.3:52049446-52049465 None:intergenic 35.0%
!! GTACCCCAAAAGTATTTGAT+AGG - chr3.3:52046443-52046462 None:intergenic 35.0%
!! TTTGGGACATAAAGGTTTTG+TGG - chr3.3:52046212-52046231 None:intergenic 35.0%
!!! GTTTTTTTAGAGAGAGAGTC+CGG + chr3.3:52047837-52047856 MS.gene048486:intron 35.0%
AAATTTGGATGAGGCTTGCA+AGG + chr3.3:52046292-52046311 MS.gene048486:CDS 40.0%
AAGTGAGAGAGTTGACACAA+TGG - chr3.3:52046542-52046561 None:intergenic 40.0%
ACAATCAATGTGTTGGAAGC+TGG - chr3.3:52049158-52049177 None:intergenic 40.0%
AGATTTATGGGTCGGTTGTT+GGG + chr3.3:52047165-52047184 MS.gene048486:intron 40.0%
AGGTGTTAAGTCTCGAACTA+AGG + chr3.3:52049534-52049553 MS.gene048486:intron 40.0%
CCTACAACCAAGTGGTTTAA+GGG + chr3.3:52049579-52049598 MS.gene048486:intron 40.0%
CTATTCCGTTTGGCTAATCA+TGG + chr3.3:52046323-52046342 MS.gene048486:CDS 40.0%
GGACTTGAGTGCAGAATATT+TGG - chr3.3:52048299-52048318 None:intergenic 40.0%
GGATTCTCTCCTCAACTTTA+TGG - chr3.3:52049561-52049580 None:intergenic 40.0%
GGTTACATGTTTCCTTTGCA+AGG + chr3.3:52048862-52048881 MS.gene048486:intron 40.0%
TAGATTTATGGGTCGGTTGT+TGG + chr3.3:52047164-52047183 MS.gene048486:intron 40.0%
TCAAGGTTTCAGAAGAACCA+AGG + chr3.3:52050466-52050485 MS.gene048486:CDS 40.0%
TCCTACAACCAAGTGGTTTA+AGG + chr3.3:52049578-52049597 MS.gene048486:intron 40.0%
TGTCATTGTGTCATACCTGA+TGG - chr3.3:52046591-52046610 None:intergenic 40.0%
! GAACACCATGATTAGCCAAA+CGG - chr3.3:52046331-52046350 None:intergenic 40.0%
! TGGTGTTCCAATAACCCTTT+TGG + chr3.3:52046343-52046362 MS.gene048486:CDS 40.0%
! TTTGTGGTTGGTTGTTGTGT+TGG - chr3.3:52046196-52046215 None:intergenic 40.0%
!! GGACATAAAGGTTTTGTGGT+TGG - chr3.3:52046208-52046227 None:intergenic 40.0%
AAAGCCTGTACGACAGCTTT+AGG - chr3.3:52050012-52050031 None:intergenic 45.0%
ATGGTCATCTGGGTTCAGTA+TGG - chr3.3:52049087-52049106 None:intergenic 45.0%
CCATCGCCTTAACTATGAGA+CGG - chr3.3:52048488-52048507 None:intergenic 45.0%
CCCTTAAACCACTTGGTTGT+AGG - chr3.3:52049582-52049601 None:intergenic 45.0%
GAACTTGAAGTCCACTCACA+TGG - chr3.3:52049106-52049125 None:intergenic 45.0%
GAGAGAATCCTACAACCAAG+TGG + chr3.3:52049571-52049590 MS.gene048486:intron 45.0%
GAGTGTGTCACATAGAGTGA+AGG + chr3.3:52050288-52050307 MS.gene048486:CDS 45.0%
TCAATCACAACGTCTTCACC+AGG - chr3.3:52050358-52050377 None:intergenic 45.0%
! TCTGGGACAGCTATAGCAAA+AGG + chr3.3:52046479-52046498 MS.gene048486:CDS 45.0%
! TTGTTGTGTTGGCGGAGAAT+TGG - chr3.3:52046185-52046204 None:intergenic 45.0%
! TTTGCTATAGCTGTCCCAGA+TGG - chr3.3:52046479-52046498 None:intergenic 45.0%
!! CATTTTCTAGCAGGCCTTTG+TGG + chr3.3:52047590-52047609 MS.gene048486:intron 45.0%
!!! GAACCGGTGTTTTGACCAAT+TGG + chr3.3:52047247-52047266 MS.gene048486:intron 45.0%
!! TATAATTATTATTATTATGA+AGG + chr3.3:52046635-52046654 MS.gene048486:intron 5.0%
!!! TTTTAACAAAATTATTTTTT+TGG + chr3.3:52048667-52048686 MS.gene048486:intron 5.0%
AACCCAGATGACCATGTGAG+TGG + chr3.3:52049092-52049111 MS.gene048486:CDS 50.0%
AAGTGCATAGGGGGTCCATA+GGG - chr3.3:52050042-52050061 None:intergenic 50.0%
AGACCTGCATCATGTCACCA+AGG - chr3.3:52049184-52049203 None:intergenic 50.0%
AGCTGTCCCAGATGGAGTTA+GGG - chr3.3:52046471-52046490 None:intergenic 50.0%
AGTCCACTCACATGGTCATC+TGG - chr3.3:52049098-52049117 None:intergenic 50.0%
ATAGGGGGTCCATAGGGATT+AGG - chr3.3:52050036-52050055 None:intergenic 50.0%
ATCCACCCACTGATGTTGGT+TGG + chr3.3:52049027-52049046 MS.gene048486:CDS 50.0%
ATGCCCCAACCAACATCAGT+GGG - chr3.3:52049035-52049054 None:intergenic 50.0%
CAGGCTTTCCCTAATCCCTA+TGG + chr3.3:52050024-52050043 MS.gene048486:intron 50.0%
CCCAATAACACTGCACGAAC+CGG + chr3.3:52047231-52047250 MS.gene048486:intron 50.0%
CCGTCTCATAGTTAAGGCGA+TGG + chr3.3:52048485-52048504 MS.gene048486:intron 50.0%
CGTTATCCACCCACTGATGT+TGG + chr3.3:52049023-52049042 MS.gene048486:CDS 50.0%
GATGAGGCTTGCAAGGAATG+GGG + chr3.3:52046299-52046318 MS.gene048486:CDS 50.0%
GGAATGGGGTCTATTCCGTT+TGG + chr3.3:52046313-52046332 MS.gene048486:CDS 50.0%
GGATGAGGCTTGCAAGGAAT+GGG + chr3.3:52046298-52046317 MS.gene048486:CDS 50.0%
GTCCACTCACATGGTCATCT+GGG - chr3.3:52049097-52049116 None:intergenic 50.0%
TAAGTGCATAGGGGGTCCAT+AGG - chr3.3:52050043-52050062 None:intergenic 50.0%
TAGCGGTTAGAACTCGACTG+TGG + chr3.3:52047514-52047533 MS.gene048486:intron 50.0%
TAGCTGTCCCAGATGGAGTT+AGG - chr3.3:52046472-52046491 None:intergenic 50.0%
TAGGGGGTCCATAGGGATTA+GGG - chr3.3:52050035-52050054 None:intergenic 50.0%
TGGACTCGAGTGAAGGAAGT+TGG - chr3.3:52046571-52046590 None:intergenic 50.0%
TGGATGAGGCTTGCAAGGAA+TGG + chr3.3:52046297-52046316 MS.gene048486:CDS 50.0%
TGGGAGTTTGTCCATGCATG+TGG + chr3.3:52047129-52047148 MS.gene048486:intron 50.0%
TTCCTTCACTCGAGTCCATC+AGG + chr3.3:52046573-52046592 MS.gene048486:CDS 50.0%
! CAACCTTGGTGACATGATGC+AGG + chr3.3:52049178-52049197 MS.gene048486:CDS 50.0%
! CCGGTTCGTGCAGTGTTATT+GGG - chr3.3:52047234-52047253 None:intergenic 50.0%
! GTGGTTGGTTGTTGTGTTGG+CGG - chr3.3:52046193-52046212 None:intergenic 50.0%
! TCCACCCACTGATGTTGGTT+GGG + chr3.3:52049028-52049047 MS.gene048486:CDS 50.0%
! TGTGTTGGCGGAGAATTGGA+GGG - chr3.3:52046181-52046200 None:intergenic 50.0%
! TTGTGTTGGCGGAGAATTGG+AGG - chr3.3:52046182-52046201 None:intergenic 50.0%
!! ACCGGTTCGTGCAGTGTTAT+TGG - chr3.3:52047235-52047254 None:intergenic 50.0%
!! CGAGTGAAGGAAGTTGGTGT+TGG - chr3.3:52046565-52046584 None:intergenic 50.0%
!! TACCTGATGGACTCGAGTGA+AGG - chr3.3:52046578-52046597 None:intergenic 50.0%
CATGCCCCAACCAACATCAG+TGG - chr3.3:52049036-52049055 None:intergenic 55.0%
GAGGCCTAAAGCTGTCGTAC+AGG + chr3.3:52050005-52050024 MS.gene048486:intron 55.0%
TCCCAGATGGAGTTAGGGCA+GGG - chr3.3:52046466-52046485 None:intergenic 55.0%
TTGGCGGAGAATTGGAGGGT+AGG - chr3.3:52046177-52046196 None:intergenic 55.0%
! CACTGATGTTGGTTGGGGCA+TGG + chr3.3:52049034-52049053 MS.gene048486:CDS 55.0%
! CCACCCACTGATGTTGGTTG+GGG + chr3.3:52049029-52049048 MS.gene048486:CDS 55.0%
! TGATGTTGGTTGGGGCATGG+AGG + chr3.3:52049037-52049056 MS.gene048486:CDS 55.0%
ACCCCTGCCCTAACTCCATC+TGG + chr3.3:52046461-52046480 MS.gene048486:CDS 60.0%
CCCAGATGGAGTTAGGGCAG+GGG - chr3.3:52046465-52046484 None:intergenic 60.0%
CCCCAACCAACATCAGTGGG+TGG - chr3.3:52049032-52049051 None:intergenic 60.0%
CCCCTGCCCTAACTCCATCT+GGG + chr3.3:52046462-52046481 MS.gene048486:CDS 60.0%
GTCCCAGATGGAGTTAGGGC+AGG - chr3.3:52046467-52046486 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 52046158 52050492 52046158 ID=MS.gene048486
chr3.3 mRNA 52046158 52050492 52046158 ID=MS.gene048486.t1;Parent=MS.gene048486
chr3.3 exon 52046158 52046594 52046158 ID=MS.gene048486.t1.exon1;Parent=MS.gene048486.t1
chr3.3 CDS 52046158 52046594 52046158 ID=cds.MS.gene048486.t1;Parent=MS.gene048486.t1
chr3.3 exon 52048884 52049199 52048884 ID=MS.gene048486.t1.exon2;Parent=MS.gene048486.t1
chr3.3 CDS 52048884 52049199 52048884 ID=cds.MS.gene048486.t1;Parent=MS.gene048486.t1
chr3.3 exon 52050265 52050492 52050265 ID=MS.gene048486.t1.exon3;Parent=MS.gene048486.t1
chr3.3 CDS 52050265 52050492 52050265 ID=cds.MS.gene048486.t1;Parent=MS.gene048486.t1
Gene Sequence

>MS.gene048486

ATGAACAACTTGGATTCCTACCCTCCAATTCTCCGCCAACACAACAACCAACCACAAAACCTTTATGTCCCAAATGCCATAATTGAAGACTCAGATCCTATTCCAATCATAGATCTTAAGTGCTTAGAACACAAAAATTTGGATGAGGCTTGCAAGGAATGGGGTCTATTCCGTTTGGCTAATCATGGTGTTCCAATAACCCTTTTGGAACAACTTCAAGATTTAACCAAACAACTATTTTCTTTGTCCTTTGAGTCTAAACAAGAAGCATGCAATGAAAGCCCTATCAAATACTTTTGGGGTACCCCTGCCCTAACTCCATCTGGGACAGCTATAGCAAAAGGTCCTCAAAATATCAATTGGGTTGAAGGTTTTGATGTGCCATTGTGTCAACTCTCTCACTTCCAACACCAACTTCCTTCACTCGAGTCCATCAGGTATGACACAATGACAATTAACAAGTTTTTATTTTACTTTTATAATTATTATTATTATGAAGGTATTATTTTTTTTTTGAGGAATTATTAGTATTATTATTATTATTATCATTATTATTATAACAAGCTGTGTTTCATAAAAATGATCACATTTGCAACCAAAAAATTACCGAACGTATATTTTACTATCAATTATTATATTTTACTTCTAGTCAAAAACATATATTATTTTTTTTTACTTTATATTTATGATGACAATAATAATAAACTAACAAATGGTCAATAGGACCAATTTGATAATTTAGTGAAAAAAACTAATTTGAAGGATTTAGTCAAATGGTCAATAAGACTAACAAATGGACAATAATATTATTTTTTACTTTATATTATTGTTGTTATTATTATTAATATTTTCCAATGATAGCTTCTTTCTAATTCGTGTAAAATGATTTAGTCTGAAAATAATTGTGGAAGGAGAGAGAGTATTATTTTATTGTATGTCTCTTTCTTGGCCATCTTTTGTGTCTTATATTTTGGGAGTTTGTCCATGCATGTGGAAAATTATAACATAGATTTATGGGTCGGTTGTTGGGTGCAAATATTTGTTTTATTGAGAATGTGACATTTTGTTTGGTGCCCAATAACACTGCACGAACCGGTGTTTTGACCAATTGGATATTTGGATTGTGCAAATCCTTGAAATGGATTATCAGATTTGATAGATACTATCCAACGTGCAGTTTAAACAAGATACTATACTATACTCCATCAGAAATCAAAAGATAAATTACTGTTTTTGAGAGAGTGATTTTTTGTTTTTAGCTTTCTGTACAATGAAAATGAGTAGTAGTGTATCTTTTTATTTAATAGGAGAGAATAATATTTGTCAACTCTATTTAATTCTTTTTATCAAATAGTATAGCGGTTAGAACTCGACTGTGGCATGCATTATACAATATCCCTGTTAACATAATTAAACTCACAACATTAAAATTCATTTTCTAGCAGGCCTTTGTGGAAATTCATGTTAAGCAAAATTACTAAGCAGTATTTTTAAGGCATCTCATAAATTGGACCAAATTTCATTTTCATTCAGAAAAGAAAACAATCAAGTGAAAAGACAAATATTCCTTAAAAAAAATGAAAAGACAAACATGGCCGACTGTTTTAGATAACATTTGCAATTATTGCTCTCAATGTAAAAAACAAGCAAAAAAAATTATGAGTTAAGTCTAGTTAAATGTTTTTTTAGAGAGAGAGTCCGGTTAAAGATGTTAGACTTTTATATTAGTCTTGGTTTGAAGCACATATATGAGTGATATCTTTTTTTTTAGTGATATCTATATTAATGTTTGATACATCTCAAATATAATTATTTTTAGTTGAAAAAATTTATTAAAAACCATTTACAATTCTTATTTCAACCGATAAAAATTGTCGAAATTGTTTTGCATAAACATTGCGACTAAGATTTAAATTCCAATTCCTCAACTTGTGTGTATAAATTTTTAATGGTCATGACCTTTTCATCATCTATAAAAAAAATTGTTATAAACCAAAAACAATTGAAAAGAAAATTGGAACAAAGAAAAAGAATCTTACATGAAGACACAAACTTTCCTATAAATAAATAATTGTTCATTGTAAGAAGAAAAGGACAAACTTTCCTATAATAAAAAAAAGGACAAACTCCCAGTAATCCCAAATATTCTGCACTCAAGTCCTGTTAATATCTTTGAAGATAGATTCTTTCAAAAAAAAAAAAAGTAGGCCAAAAAAATATTTGAAGATAGATCATATTAAATTTATTTTTAAGTTTTTTATGTTATGTGGTTTCTCTACATTGGATTAGGACTTTAAATGGTTGTGACTAAGCATCTCAACAAATATCCGTCTCATAGTTAAGGCGATGGAATAATGTTTGATTGTTGTCGTTTTTATTAAATTAAGTTGATCGCTTTTCCTCTGAAAAACAGAAAATTAACACCAAAACACAATAATCACGGTTTGTTCCTGAAAAATGATTAATTTAACATATAATTGGTTATATTATTTCATCTTTTTTCATGGTTTTTTAACAAAATTATTTTTTTGGTACAATTTTTTAACAAATCTTTGTTTTCACATTATTAATATAACGCACAAAGTTATACTAATGCTATGTAAAATTATCTTGACAAAAAAATTCACTGTAAAATTCTATATCTTGTATATCATGTCTTGAATTTAAAGAATTTTTTTAACCGATTATTTAAATCTATTCTAATGGTTACATGTTTCCTTTGCAAGGCTTTTACTAATGGAATATGCAACCCATCTTTCAAGAATTGCTACAACTTTATTTGAAGCAATGGTTAAGAATCTTGAGCTGAATCGCAAAACAACAAAGTCATATTTATCAGAAAACACTGGCATCATACGTGTCTATCGTTATCCACCCACTGATGTTGGTTGGGGCATGGAGGTTCATACAGATAGTTCAGTGTTGTCCATACTGAACCCAGATGACCATGTGAGTGGACTTCAAGTTCTCAAAGATGATCAATGGCTCACTATAAAGCCAGCTTCCAACACATTGATTGTCAACCTTGGTGACATGATGCAGGTCTAAAGTTTTTTTCATTACTCATAATTTAATTTGGTCTGCAATATATATGTGATATTAGTAAATGTAAATATTTTGTTTAGATATACTTATATATACCCAAAAAATAGAGATTTTGATTCTCTTACTTTCTTTTTCTTCAGAGAAATGATATTTGAACATTCATTTAGTGACAACTTTTGCAACAACTTTATCTCTCATACTCACATTACTTTTTACTTTATCTCTTTATTGTTATGGTTTCCGTGCCAATACCACTTTTTTCTTTGTAAAATATGGTTGTCAAATAAGTTGTCACCAAATTGGTTGTTCAAATAACACTTCTCTTTTTTTAAGGTGTTAAGTCTCGAACTAAGGACCATAAAGTTGAGGAGAGAATCCTACAACCAAGTGGTTTAAGGGACATTAACTTTTACCTTTGAATCAAGTATGAGGTGATTGTGTTCATCATCTTCCCATTAAAACTTAGAGTAATGATATTTTGACATCCATTTGATGACAACTTTGTTGACAACCTTGTTTTTCTCACTTCTTATTGGTCAAAAACAATGGAGAGAAAAAAGGAAGAGAGAGAATAACAACATTATGTGAGTATGAGAGAGAAAGTTGTCCAAAAGTTGTCAAAAAGTGGTTGTCAAAATATCATTTCTCTAAAATTTATTAGAGTTTACAACTTAAAATATATATAAATGAGACTTCATAAATTTTAACGGTGAGATGATGAACATAGACCTTTATATTTGATTCAATCATGAGGTGATTTAAATCCAAAAATAACACTCAAATATTACAAGTCTTAATATTAGAGGCCTAAAGCTGTCGTACAGGCTTTCCCTAATCCCTATGGACCCCCTATGCACTTATTTAATTTTTAGAATGAGTAGTAGTACATTAGCAAATTATACATTTATGTGTATATTGACCAATTTTAATTTATACTTTTGTAACTTATTCTAGAAAAATAAAGGGGTCAATGTTAAATTTACCATTTCTCAACAATAAATAGGATTTTATTTTAAAGTTATATAACTATGTCTCTATTCTAATGGATTTATTTTGGTTTAGGCGATTAGCAGCGATAGATACAAGAGTGTGTCACATAGAGTGAAGGTAGAGAAAGATTTAGAGAGGATCTCAATATGCTACTTTGTATTTCCTGGTGAAGACGTTGTGATTGAGAGCAACAAGTACAAGCCATTTACTTACAATGAATTCAGAGCACAAGTGCAACAAGACATCAAAACTCTTGGAAATAAAGTAGGGCTTTCAAGGTTTCAGAAGAACCAAGGCTAA
Protein sequence

>MS.gene048486.t1

MNNLDSYPPILRQHNNQPQNLYVPNAIIEDSDPIPIIDLKCLEHKNLDEACKEWGLFRLANHGVPITLLEQLQDLTKQLFSLSFESKQEACNESPIKYFWGTPALTPSGTAIAKGPQNINWVEGFDVPLCQLSHFQHQLPSLESIRLLLMEYATHLSRIATTLFEAMVKNLELNRKTTKSYLSENTGIIRVYRYPPTDVGWGMEVHTDSSVLSILNPDDHVSGLQVLKDDQWLTIKPASNTLIVNLGDMMQAISSDRYKSVSHRVKVEKDLERISICYFVFPGEDVVIESNKYKPFTYNEFRAQVQQDIKTLGNKVGLSRFQKNQG