Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048814.t1 | XP_013447041.1 | 98.7 | 536 | 7 | 0 | 1 | 536 | 1 | 536 | 0.00E+00 | 1082 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048814.t1 | O66601 | 53.2 | 524 | 226 | 8 | 13 | 536 | 6 | 510 | 6.5e-152 | 538.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048814.t1 | A0A072TW15 | 98.7 | 536 | 7 | 0 | 1 | 536 | 1 | 536 | 0.0e+00 | 1082.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene035805 | MS.gene048814 | PPI |
| MS.gene048814 | MS.gene064542 | PPI |
| MS.gene048814 | MS.gene36640 | PPI |
| MS.gene048814 | MS.gene023974 | PPI |
| MS.gene85452 | MS.gene048814 | PPI |
| MS.gene048814 | MS.gene73119 | PPI |
| MS.gene048814 | MS.gene058668 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048814.t1 | MTR_8g098325 | 98.694 | 536 | 7 | 0 | 1 | 536 | 1 | 536 | 0.0 | 1092 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048814.t1 | AT1G63660 | 79.773 | 529 | 107 | 0 | 8 | 536 | 6 | 534 | 0.0 | 899 |
| MS.gene048814.t1 | AT1G63660 | 76.923 | 429 | 99 | 0 | 8 | 436 | 6 | 434 | 0.0 | 706 |
Find 156 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTATAAAGGTACGTCAATT+AGG | 0.224273 | 4.3:+5923609 | MS.gene048814:intron |
| TGGTCTTGCAGTTAGAGTTC+TGG | 0.234935 | 4.3:+5923686 | MS.gene048814:CDS |
| TCCCCGACGGCTTTCTTCAA+TGG | 0.264395 | 4.3:+5922216 | MS.gene048814:CDS |
| CAGACCTTCTTACTTGGTTC+AGG | 0.287543 | 4.3:+5923319 | MS.gene048814:CDS |
| TGTGATGGAAACCTTTAAAA+AGG | 0.294638 | 4.3:+5923139 | MS.gene048814:CDS |
| GAAGCTGTTACTCTTCCTTC+TGG | 0.306647 | 4.3:+5922434 | MS.gene048814:CDS |
| CCCCGACGGCTTTCTTCAAT+GGG | 0.310713 | 4.3:+5922217 | MS.gene048814:CDS |
| CTGGCCTTTATGACGTAATA+TGG | 0.320042 | 4.3:+5923872 | MS.gene048814:CDS |
| TTGGACATAATCAGATTGTT+TGG | 0.324863 | 4.3:+5922396 | MS.gene048814:CDS |
| TTGCTGTGTCTATAGGTATA+AGG | 0.328120 | 4.3:+5923106 | MS.gene048814:intron |
| GCCAATGGCTTTATGAACTA+TGG | 0.344313 | 4.3:-5922956 | None:intergenic |
| CATGTCATTTGTGCCTTATC+TGG | 0.347619 | 4.3:+5922907 | MS.gene048814:CDS |
| ATACTGAAGACCATAAAATT+TGG | 0.353194 | 4.3:-5922516 | None:intergenic |
| GAAGTAAAGAGGAAAATTAT+TGG | 0.356749 | 4.3:+5923236 | MS.gene048814:CDS |
| GGTCTTGCAGTTAGAGTTCT+GGG | 0.357052 | 4.3:+5923687 | MS.gene048814:CDS |
| GTATGGCCGGATGGAAATTA+AGG | 0.366637 | 4.3:+5922337 | MS.gene048814:CDS |
| GTCGGGGAAGGAAGGGGAAT+CGG | 0.371614 | 4.3:-5922201 | None:intergenic |
| AGTTTCAATTTCATATCCTT+TGG | 0.386250 | 4.3:-5923440 | None:intergenic |
| GTTGGAAACACGCAGGAGTA+TGG | 0.395537 | 4.3:+5922320 | MS.gene048814:CDS |
| TCCAATGCAGTTCCTGTTCT+CGG | 0.396120 | 4.3:+5922245 | MS.gene048814:CDS |
| GAGAGAAAACGGAGAGGCTT+CGG | 0.409425 | 4.3:-5922085 | None:intergenic |
| GGCTCTTGATGGTATGGGAA+TGG | 0.412411 | 4.3:-5923397 | None:intergenic |
| GACATTATGATGGCTCTTGA+TGG | 0.415267 | 4.3:-5923408 | None:intergenic |
| GCTCTTGATGGTATGGGAAT+GGG | 0.417699 | 4.3:-5923396 | None:intergenic |
| TCGGGGAAGGAAGGGGAATC+GGG | 0.419706 | 4.3:-5922200 | None:intergenic |
| TTCTTACCAGTAAGATCTGT+TGG | 0.422935 | 4.3:+5923910 | MS.gene048814:CDS |
| TGAACTCCAACAGATCTTAC+TGG | 0.423500 | 4.3:-5923916 | None:intergenic |
| CAATTTCTTACAAAACTTCA+AGG | 0.428609 | 4.3:+5923200 | MS.gene048814:CDS |
| GTAAGATCTGTTGGAGTTCA+AGG | 0.429733 | 4.3:+5923919 | MS.gene048814:CDS |
| GGGCATGATTCAATCACATC+AGG | 0.436861 | 4.3:-5923353 | None:intergenic |
| GTATAAAGGTACGTCAATTA+GGG | 0.444870 | 4.3:+5923610 | MS.gene048814:intron |
| GTGGAAGATGGAGGATGTGT+TGG | 0.444993 | 4.3:+5922840 | MS.gene048814:CDS |
| CGTCATCCCTTCCCTGGGCC+TGG | 0.447113 | 4.3:+5923666 | MS.gene048814:CDS |
| TGGAAGCAGACCTTCTTACT+TGG | 0.447736 | 4.3:+5923313 | MS.gene048814:CDS |
| GATGTTTGTGGGATTTCAGC+AGG | 0.450199 | 4.3:+5922817 | MS.gene048814:CDS |
| GACTCATACGCCGGAGGGAA+TGG | 0.454303 | 4.3:+5922771 | MS.gene048814:CDS |
| CAAAAGCTAGAAAAGGAACT+TGG | 0.456695 | 4.3:+5923293 | MS.gene048814:CDS |
| CTAAAACGTCATCCCTTCCC+TGG | 0.460144 | 4.3:+5923660 | MS.gene048814:CDS |
| TCCTTCTGGTTTCAATGTCG+TGG | 0.462035 | 4.3:+5922448 | MS.gene048814:CDS |
| CCCTCCCTCGTCATTCTCTC+CGG | 0.466714 | 4.3:+5922155 | MS.gene048814:CDS |
| TATGATGGCTCTTGATGGTA+TGG | 0.468360 | 4.3:-5923403 | None:intergenic |
| CGAAGTCGAGGATGAGAACT+AGG | 0.468903 | 4.3:-5922028 | None:intergenic |
| TCCTTGAAAAGTAGTTTAAG+TGG | 0.473279 | 4.3:-5923470 | None:intergenic |
| AATCGGGAGTGTGAACGGAG+TGG | 0.473517 | 4.3:-5922184 | None:intergenic |
| TCGTTGACAATGGCTTGCTC+AGG | 0.477035 | 4.3:+5922998 | MS.gene048814:CDS |
| ATCGGGAGTGTGAACGGAGT+GGG | 0.478020 | 4.3:-5922183 | None:intergenic |
| AGACCTTCTTACTTGGTTCA+GGG | 0.478848 | 4.3:+5923320 | MS.gene048814:CDS |
| CTTGCCATATTACGTCATAA+AGG | 0.478901 | 4.3:-5923876 | None:intergenic |
| TTATGTCCAACTTTCTCAGC+AGG | 0.480136 | 4.3:-5922383 | None:intergenic |
| GCAGCATCAACACACTCAAC+TGG | 0.486387 | 4.3:-5923173 | None:intergenic |
| TTCAGTGTTTCCATTCCCTC+CGG | 0.487027 | 4.3:-5922781 | None:intergenic |
| CAGCTTCTTGTTAGCCGTCT+CGG | 0.488371 | 4.3:+5922284 | MS.gene048814:CDS |
| GCACAAATGACATGTTCATC+AGG | 0.494398 | 4.3:-5922898 | None:intergenic |
| AAACGGAGAGGCTTCGGATA+CGG | 0.496736 | 4.3:-5922079 | None:intergenic |
| CCGTAGCAGATACCGAGAAC+AGG | 0.498393 | 4.3:-5922257 | None:intergenic |
| TTTGGACCTTAATTTCCATC+CGG | 0.502860 | 4.3:-5922343 | None:intergenic |
| GCCCATTGAAGAAAGCCGTC+GGG | 0.506662 | 4.3:-5922218 | None:intergenic |
| GAAAGCCGTCGGGGAAGGAA+GGG | 0.507848 | 4.3:-5922208 | None:intergenic |
| GATTTCAGCAGGGTGGAAGA+TGG | 0.508686 | 4.3:+5922828 | MS.gene048814:CDS |
| GTTGAGGCAGAGAGAGAAAA+CGG | 0.509193 | 4.3:-5922096 | None:intergenic |
| TGTCTATAGGTATAAGGAGC+AGG | 0.509880 | 4.3:+5923112 | MS.gene048814:intron |
| GGAATCAACACCACCAGATA+AGG | 0.510348 | 4.3:-5922920 | None:intergenic |
| GAAGATGGAGGATGTGTTGG+AGG | 0.511074 | 4.3:+5922843 | MS.gene048814:CDS |
| GAAGACCACCGACATTATGA+TGG | 0.513566 | 4.3:-5923418 | None:intergenic |
| TCATGCCCACCACCTGGAAG+TGG | 0.514563 | 4.3:+5923368 | MS.gene048814:CDS |
| CATTCCATCTTGACTTGTCA+CGG | 0.515702 | 4.3:-5923980 | None:intergenic |
| TTCAATCACATCAGGGTACA+AGG | 0.515784 | 4.3:-5923345 | None:intergenic |
| AGGGGAATCGGGAGTGTGAA+CGG | 0.516292 | 4.3:-5922189 | None:intergenic |
| GTGAACGGAGTGGGGACCAC+CGG | 0.517539 | 4.3:-5922174 | None:intergenic |
| AAAGTGATTAATAATACAGT+GGG | 0.519092 | 4.3:+5922874 | MS.gene048814:CDS |
| TGGGAAGGTGACTCATACGC+CGG | 0.519837 | 4.3:+5922762 | MS.gene048814:intron |
| AAAGCCGTCGGGGAAGGAAG+GGG | 0.520124 | 4.3:-5922207 | None:intergenic |
| TATTCCCACTCAATTGTTGA+AGG | 0.524026 | 4.3:-5924676 | None:intergenic |
| TGCCTTGGATGTTCTCCGAC+AGG | 0.525589 | 4.3:+5923728 | MS.gene048814:CDS |
| ATTCAGTCAATCAAAGATGC+TGG | 0.527113 | 4.3:+5923853 | MS.gene048814:CDS |
| AGAAAGCCGTCGGGGAAGGA+AGG | 0.532276 | 4.3:-5922209 | None:intergenic |
| CCGGAGAGAATGACGAGGGA+GGG | 0.536699 | 4.3:-5922155 | None:intergenic |
| TAAGGAGCAGGAACGTGTGA+TGG | 0.541741 | 4.3:+5923124 | MS.gene048814:CDS |
| TGCAAGACCAGGCCCAGGGA+AGG | 0.542703 | 4.3:-5923673 | None:intergenic |
| ACCATAGTTCATAAAGCCAT+TGG | 0.544087 | 4.3:+5922955 | MS.gene048814:CDS |
| CGGCTCTGAGTGCAACAACA+TGG | 0.545340 | 4.3:-5923960 | None:intergenic |
| TAAAACGTCATCCCTTCCCT+GGG | 0.546430 | 4.3:+5923661 | MS.gene048814:CDS |
| CGTGACTGAAGGAAATGCCT+TGG | 0.548575 | 4.3:+5923713 | MS.gene048814:CDS |
| GCAAGACCAGGCCCAGGGAA+GGG | 0.552040 | 4.3:-5923672 | None:intergenic |
| CGGAGAGAATGACGAGGGAG+GGG | 0.552242 | 4.3:-5922154 | None:intergenic |
| ACCGAGAACAGGAACTGCAT+TGG | 0.554925 | 4.3:-5922246 | None:intergenic |
| ACGTCAATTAGGGAGGATCA+TGG | 0.556420 | 4.3:+5923620 | MS.gene048814:CDS |
| GGAGGGGTTGAGTTCAGTGA+TGG | 0.557696 | 4.3:-5922138 | None:intergenic |
| TGACAGATCCTGAAGTAAAG+AGG | 0.559123 | 4.3:+5923225 | MS.gene048814:CDS |
| TTGAAGAAAGCCGTCGGGGA+AGG | 0.559604 | 4.3:-5922213 | None:intergenic |
| CCTGTTCTCGGTATCTGCTA+CGG | 0.560452 | 4.3:+5922257 | MS.gene048814:CDS |
| CTAGTTCTCATCCTCGACTT+CGG | 0.560880 | 4.3:+5922029 | MS.gene048814:CDS |
| CGCGAACTTCACCGCCGAGA+CGG | 0.560925 | 4.3:-5922298 | None:intergenic |
| ATTGAATCATGCCCACCACC+TGG | 0.563547 | 4.3:+5923362 | MS.gene048814:CDS |
| GTTTCACGCAAAATCTGTAA+TGG | 0.563756 | 4.3:+5924607 | MS.gene048814:CDS |
| CTAACTGCAAGACCAGGCCC+AGG | 0.566444 | 4.3:-5923678 | None:intergenic |
| GTTCCCTGAACCAAGTAAGA+AGG | 0.567722 | 4.3:-5923323 | None:intergenic |
| TCCCTCGTCATTCTCTCCGG+TGG | 0.567925 | 4.3:+5922158 | MS.gene048814:CDS |
| TCCCACTCAATTGTTGAAGG+AGG | 0.570083 | 4.3:-5924673 | None:intergenic |
| GGGGTTCTCGATGGCAGCGA+CGG | 0.572007 | 4.3:-5922489 | None:intergenic |
| TTCATAAAGCCATTGGCGAT+AGG | 0.572442 | 4.3:+5922962 | MS.gene048814:CDS |
| GCCTCCTTCAACAATTGAGT+GGG | 0.574342 | 4.3:+5924672 | MS.gene048814:CDS |
| GAAACACGCAGGAGTATGGC+CGG | 0.577417 | 4.3:+5922324 | MS.gene048814:CDS |
| AGACCATAAAATTTGGCAGA+GGG | 0.578757 | 4.3:-5922509 | None:intergenic |
| CTCGGCGGTGAAGTTCGCGT+TGG | 0.580756 | 4.3:+5922302 | MS.gene048814:CDS |
| AAGATGGAATGACAGCAGAC+TGG | 0.581634 | 4.3:+5923992 | MS.gene048814:CDS |
| GGCTCTGAGTGCAACAACAT+GGG | 0.583042 | 4.3:-5923959 | None:intergenic |
| GAAGAGAAGAAGTGCCGTTG+AGG | 0.585102 | 4.3:-5922112 | None:intergenic |
| TCGGGAGTGTGAACGGAGTG+GGG | 0.587305 | 4.3:-5922182 | None:intergenic |
| AGCCCATTGAAGAAAGCCGT+CGG | 0.590042 | 4.3:-5922219 | None:intergenic |
| AGAACTCTAACTGCAAGACC+AGG | 0.590896 | 4.3:-5923684 | None:intergenic |
| CACGCAGGAGTATGGCCGGA+TGG | 0.594351 | 4.3:+5922328 | MS.gene048814:CDS |
| ATGTTTGTGGGATTTCAGCA+GGG | 0.596794 | 4.3:+5922818 | MS.gene048814:CDS |
| CATGCCCACCACCTGGAAGT+GGG | 0.599206 | 4.3:+5923369 | MS.gene048814:CDS |
| TACTGGTAAGAAAACTGCAA+AGG | 0.601593 | 4.3:-5923899 | None:intergenic |
| ATCAAGAGCCATCATAATGT+CGG | 0.606367 | 4.3:+5923410 | MS.gene048814:CDS |
| GTCATTTGTGCCTTATCTGG+TGG | 0.607906 | 4.3:+5922910 | MS.gene048814:CDS |
| TTTGGCAGAGGGGTTCTCGA+TGG | 0.608956 | 4.3:-5922498 | None:intergenic |
| AGCCTCCTTCAACAATTGAG+TGG | 0.609163 | 4.3:+5924671 | MS.gene048814:CDS |
| AACTATGGTAGCAGCAACAG+TGG | 0.609789 | 4.3:-5922941 | None:intergenic |
| GACCATAAAATTTGGCAGAG+GGG | 0.610716 | 4.3:-5922508 | None:intergenic |
| ACAATGAAGCCTATCGCCAA+TGG | 0.610723 | 4.3:-5922971 | None:intergenic |
| AGAGCCGTGACAAGTCAAGA+TGG | 0.616452 | 4.3:+5923976 | MS.gene048814:CDS |
| TGTATTGAGAACCGAAGTCG+AGG | 0.618773 | 4.3:-5922040 | None:intergenic |
| GTTCTGGGTGACGTGACTGA+AGG | 0.621656 | 4.3:+5923702 | MS.gene048814:CDS |
| TAATGTCGGTGGTCTTCCAA+AGG | 0.622152 | 4.3:+5923424 | MS.gene048814:CDS |
| AAGGTGACTCATACGCCGGA+GGG | 0.623263 | 4.3:+5922766 | MS.gene048814:intron |
| CAGATTGTTTGGATGAGTCA+TGG | 0.625708 | 4.3:+5922407 | MS.gene048814:CDS |
| TACCTGTCGGAGAACATCCA+AGG | 0.628154 | 4.3:-5923730 | None:intergenic |
| CAAAGTGATTAATAATACAG+TGG | 0.630032 | 4.3:+5922873 | MS.gene048814:CDS |
| TTCGGATACGGCGAGTGATG+AGG | 0.631967 | 4.3:-5922067 | None:intergenic |
| GATTCCCCTTCCTTCCCCGA+CGG | 0.633487 | 4.3:+5922203 | MS.gene048814:CDS |
| TTCAGCAGGGTGGAAGATGG+AGG | 0.635225 | 4.3:+5922831 | MS.gene048814:CDS |
| ATGATGGCTCTTGATGGTAT+GGG | 0.637099 | 4.3:-5923402 | None:intergenic |
| CCCATTGAAGAAAGCCGTCG+GGG | 0.638613 | 4.3:-5922217 | None:intergenic |
| GTCGTGGCACGAAGTCAACA+AGG | 0.638723 | 4.3:+5922464 | MS.gene048814:CDS |
| AGGATCATGGATGTCCCTGA+GGG | 0.638998 | 4.3:+5923633 | MS.gene048814:CDS |
| GCCACGACATTGAAACCAGA+AGG | 0.640831 | 4.3:-5922449 | None:intergenic |
| ACCGGAGAGAATGACGAGGG+AGG | 0.643815 | 4.3:-5922156 | None:intergenic |
| AAGACCATAAAATTTGGCAG+AGG | 0.647998 | 4.3:-5922510 | None:intergenic |
| GCACAACACGATTCACACCA+CGG | 0.648587 | 4.3:-5924633 | None:intergenic |
| GGCATGATTCAATCACATCA+GGG | 0.655836 | 4.3:-5923352 | None:intergenic |
| TAAAGGTACGTCAATTAGGG+AGG | 0.658939 | 4.3:+5923613 | MS.gene048814:intron |
| AAGAGCCATCATAATGTCGG+TGG | 0.662337 | 4.3:+5923413 | MS.gene048814:CDS |
| GAAGGTGACTCATACGCCGG+AGG | 0.662543 | 4.3:+5922765 | MS.gene048814:intron |
| GAGGATCATGGATGTCCCTG+AGG | 0.671870 | 4.3:+5923632 | MS.gene048814:CDS |
| ACCACCGGAGAGAATGACGA+GGG | 0.673607 | 4.3:-5922159 | None:intergenic |
| TAACTGCAAGACCAGGCCCA+GGG | 0.675071 | 4.3:-5923677 | None:intergenic |
| TTTGTGGGATTTCAGCAGGG+TGG | 0.679722 | 4.3:+5922821 | MS.gene048814:CDS |
| AAAATCTGTAATGGTGTCCG+TGG | 0.698688 | 4.3:+5924616 | MS.gene048814:CDS |
| GGCAGAGAGAGAAAACGGAG+AGG | 0.709889 | 4.3:-5922091 | None:intergenic |
| GACCACCGGAGAGAATGACG+AGG | 0.712882 | 4.3:-5922160 | None:intergenic |
| AGTTCGCGTTGGAAACACGC+AGG | 0.714465 | 4.3:+5922313 | MS.gene048814:CDS |
| TGGTCTTCAGTATCACCCTG+AGG | 0.715570 | 4.3:+5922526 | MS.gene048814:CDS |
| CTTCTTGTTAGCCGTCTCGG+CGG | 0.726294 | 4.3:+5922287 | MS.gene048814:CDS |
| AAGTGATTAATAATACAGTG+GGG | 0.782696 | 4.3:+5922875 | MS.gene048814:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTCTTATTTCTTTTTTAAA+TGG | + | chr4.3:5924098-5924117 | MS.gene048814:intron | 10.0% |
| !! | AAATTGAATCAAAATATTGA+AGG | - | chr4.3:5923806-5923825 | None:intergenic | 15.0% |
| !! | TTTATTCATTGTAAAGATAT+TGG | + | chr4.3:5923037-5923056 | MS.gene048814:intron | 15.0% |
| !!! | AACCTTTAAAATTTCAAATA+CGG | + | chr4.3:5924498-5924517 | MS.gene048814:intron | 15.0% |
| !!! | ATTGTTATTTGTTCTTTTTT+GGG | + | chr4.3:5922743-5922762 | MS.gene048814:intron | 15.0% |
| !!! | TGATAGAACAAAATTTATTT+TGG | + | chr4.3:5924167-5924186 | MS.gene048814:intron | 15.0% |
| !! | AAAGTGATTAATAATACAGT+GGG | + | chr4.3:5922874-5922893 | MS.gene048814:CDS | 20.0% |
| !! | AACTTGATAAAATGATATTG+TGG | - | chr4.3:5924359-5924378 | None:intergenic | 20.0% |
| !! | CTGTTAAAAAGAAAAAACTA+AGG | - | chr4.3:5924281-5924300 | None:intergenic | 20.0% |
| !! | TAAAGATATTGGATTACAAA+CGG | + | chr4.3:5923048-5923067 | MS.gene048814:intron | 20.0% |
| !!! | ATTTTCATTTCCTTGTATAA+AGG | + | chr4.3:5923596-5923615 | MS.gene048814:intron | 20.0% |
| !!! | ATTTTCTATTTGATGTTTGT+GGG | + | chr4.3:5922806-5922825 | MS.gene048814:CDS | 20.0% |
| !!! | GATTGTTATTTGTTCTTTTT+TGG | + | chr4.3:5922742-5922761 | MS.gene048814:intron | 20.0% |
| !!! | TAAATGAAGATCCTTTTTAA+AGG | - | chr4.3:5923153-5923172 | None:intergenic | 20.0% |
| !!! | TAAGGTATATTTTAGCTTTT+AGG | - | chr4.3:5924263-5924282 | None:intergenic | 20.0% |
| !!! | TGCTAGTTCATTTTAATAAT+TGG | + | chr4.3:5924463-5924482 | MS.gene048814:intron | 20.0% |
| ! | AAGTGATTAATAATACAGTG+GGG | + | chr4.3:5922875-5922894 | MS.gene048814:CDS | 25.0% |
| ! | AATCAAAATTAAACACAAGC+AGG | - | chr4.3:5922568-5922587 | None:intergenic | 25.0% |
| ! | AGGTATATTATTATACCTCA+GGG | - | chr4.3:5922544-5922563 | None:intergenic | 25.0% |
| ! | AGTTTCAATTTCATATCCTT+TGG | - | chr4.3:5923443-5923462 | None:intergenic | 25.0% |
| ! | ATACTGAAGACCATAAAATT+TGG | - | chr4.3:5922519-5922538 | None:intergenic | 25.0% |
| ! | CAAAGTGATTAATAATACAG+TGG | + | chr4.3:5922873-5922892 | MS.gene048814:CDS | 25.0% |
| ! | CAATTTCTTACAAAACTTCA+AGG | + | chr4.3:5923200-5923219 | MS.gene048814:CDS | 25.0% |
| ! | CTATCAATCAATTATATCGA+TGG | - | chr4.3:5922681-5922700 | None:intergenic | 25.0% |
| ! | GAAGTAAAGAGGAAAATTAT+TGG | + | chr4.3:5923236-5923255 | MS.gene048814:CDS | 25.0% |
| ! | TAGGTATATTATTATACCTC+AGG | - | chr4.3:5922545-5922564 | None:intergenic | 25.0% |
| ! | TGTAATTTGAATTGAATTCC+AGG | + | chr4.3:5924554-5924573 | MS.gene048814:intron | 25.0% |
| ! | TTAAAATGAACTAGCATCAA+AGG | - | chr4.3:5924459-5924478 | None:intergenic | 25.0% |
| !! | ATAATTTTCCTCTTTACTTC+AGG | - | chr4.3:5923236-5923255 | None:intergenic | 25.0% |
| !! | CATTTTCTATTTGATGTTTG+TGG | + | chr4.3:5922805-5922824 | MS.gene048814:CDS | 25.0% |
| !! | GATTCAATTTTTCTTTTCTC+AGG | + | chr4.3:5923816-5923835 | MS.gene048814:intron | 25.0% |
| !!! | AGCCGTATTTGAAATTTTAA+AGG | - | chr4.3:5924503-5924522 | None:intergenic | 25.0% |
| !!! | ATATTTTAGCTTTTAGGACT+TGG | - | chr4.3:5924257-5924276 | None:intergenic | 25.0% |
| !!! | CTTGAAGTTTTGTAAGAAAT+TGG | - | chr4.3:5923202-5923221 | None:intergenic | 25.0% |
| !!! | TATTTTAGCTTTTAGGACTT+GGG | - | chr4.3:5924256-5924275 | None:intergenic | 25.0% |
| !!! | TCTATCAAATAGTTTGCTAA+AGG | - | chr4.3:5924154-5924173 | None:intergenic | 25.0% |
| !!! | TTATTTGTTCTTTTTTGGGA+AGG | + | chr4.3:5922747-5922766 | MS.gene048814:intron | 25.0% |
| AAAATTAAACACAAGCAGGT+AGG | - | chr4.3:5922564-5922583 | None:intergenic | 30.0% | |
| AATGGTACCAAATTACCATT+AGG | + | chr4.3:5924116-5924135 | MS.gene048814:intron | 30.0% | |
| AATTGACGTACCTTTATACA+AGG | - | chr4.3:5923609-5923628 | None:intergenic | 30.0% | |
| ATCATCTTAATAGCACTTTG+CGG | + | chr4.3:5924527-5924546 | MS.gene048814:intron | 30.0% | |
| TCCTTGAAAAGTAGTTTAAG+TGG | - | chr4.3:5923473-5923492 | None:intergenic | 30.0% | |
| TTAACCTCCTAATGGTAATT+TGG | - | chr4.3:5924126-5924145 | None:intergenic | 30.0% | |
| TTGGAAATATATCAGCTTCT+GGG | + | chr4.3:5924419-5924438 | MS.gene048814:intron | 30.0% | |
| TTGGACATAATCAGATTGTT+TGG | + | chr4.3:5922396-5922415 | MS.gene048814:CDS | 30.0% | |
| TTTCAACTGAAGTATGCATA+TGG | + | chr4.3:5924020-5924039 | MS.gene048814:intron | 30.0% | |
| ! | AGGTCTGATTTTACTTGTTT+TGG | - | chr4.3:5922011-5922030 | None:intergenic | 30.0% |
| ! | GTATAAAGGTACGTCAATTA+GGG | + | chr4.3:5923610-5923629 | MS.gene048814:intron | 30.0% |
| ! | TGTATAAAGGTACGTCAATT+AGG | + | chr4.3:5923609-5923628 | MS.gene048814:intron | 30.0% |
| ! | TGTGATGGAAACCTTTAAAA+AGG | + | chr4.3:5923139-5923158 | MS.gene048814:CDS | 30.0% |
| ! | TTTTGCTCAAAAGCTAGAAA+AGG | + | chr4.3:5923286-5923305 | MS.gene048814:CDS | 30.0% |
| !! | TAAACTACTTTTCAAGGATG+AGG | + | chr4.3:5923475-5923494 | MS.gene048814:CDS | 30.0% |
| AACGACCCTAGTATCTAATT+AGG | - | chr4.3:5924392-5924411 | None:intergenic | 35.0% | |
| AAGACCATAAAATTTGGCAG+AGG | - | chr4.3:5922513-5922532 | None:intergenic | 35.0% | |
| AATGAATAAACCGAGACTAG+TGG | - | chr4.3:5923027-5923046 | None:intergenic | 35.0% | |
| ACCATAGTTCATAAAGCCAT+TGG | + | chr4.3:5922955-5922974 | MS.gene048814:CDS | 35.0% | |
| ACGAGCCTAATTAGATACTA+GGG | + | chr4.3:5924384-5924403 | MS.gene048814:intron | 35.0% | |
| AGACCATAAAATTTGGCAGA+GGG | - | chr4.3:5922512-5922531 | None:intergenic | 35.0% | |
| ATCAAGAGCCATCATAATGT+CGG | + | chr4.3:5923410-5923429 | MS.gene048814:CDS | 35.0% | |
| ATTCAGTCAATCAAAGATGC+TGG | + | chr4.3:5923853-5923872 | MS.gene048814:CDS | 35.0% | |
| CAAAAGCTAGAAAAGGAACT+TGG | + | chr4.3:5923293-5923312 | MS.gene048814:CDS | 35.0% | |
| CAGAAGCTGATATATTTCCA+AGG | - | chr4.3:5924420-5924439 | None:intergenic | 35.0% | |
| CTTGCCATATTACGTCATAA+AGG | - | chr4.3:5923879-5923898 | None:intergenic | 35.0% | |
| CTTGGAAATATATCAGCTTC+TGG | + | chr4.3:5924418-5924437 | MS.gene048814:intron | 35.0% | |
| GTTTCACGCAAAATCTGTAA+TGG | + | chr4.3:5924607-5924626 | MS.gene048814:CDS | 35.0% | |
| TACTGGTAAGAAAACTGCAA+AGG | - | chr4.3:5923902-5923921 | None:intergenic | 35.0% | |
| TATTCCCACTCAATTGTTGA+AGG | - | chr4.3:5924679-5924698 | None:intergenic | 35.0% | |
| TTCTTACCAGTAAGATCTGT+TGG | + | chr4.3:5923910-5923929 | MS.gene048814:CDS | 35.0% | |
| TTGCTGTGTCTATAGGTATA+AGG | + | chr4.3:5923106-5923125 | MS.gene048814:intron | 35.0% | |
| TTTGGACCTTAATTTCCATC+CGG | - | chr4.3:5922346-5922365 | None:intergenic | 35.0% | |
| ! | ATGATGCTGGATAACTCTTT+TGG | + | chr4.3:5924045-5924064 | MS.gene048814:intron | 35.0% |
| ! | CATTGTGTTTTCGTTGACAA+TGG | + | chr4.3:5922988-5923007 | MS.gene048814:CDS | 35.0% |
| ! | GATTTTGTTGCTGTGTCTAT+AGG | + | chr4.3:5923099-5923118 | MS.gene048814:intron | 35.0% |
| ! | TCTCTCACACAAGCTTTTAA+TGG | - | chr4.3:5924212-5924231 | None:intergenic | 35.0% |
| ! | TTTTGCGTGAAACATCATCA+AGG | - | chr4.3:5924600-5924619 | None:intergenic | 35.0% |
| !! | GCCACTTAAACTACTTTTCA+AGG | + | chr4.3:5923469-5923488 | MS.gene048814:CDS | 35.0% |
| AAAATCTGTAATGGTGTCCG+TGG | + | chr4.3:5924616-5924635 | MS.gene048814:CDS | 40.0% | |
| AGACCTTCTTACTTGGTTCA+GGG | + | chr4.3:5923320-5923339 | MS.gene048814:CDS | 40.0% | |
| AGGCACATTTAACCTCCTAA+TGG | - | chr4.3:5924134-5924153 | None:intergenic | 40.0% | |
| ATGTTTGTGGGATTTCAGCA+GGG | + | chr4.3:5922818-5922837 | MS.gene048814:CDS | 40.0% | |
| CACGAGCCTAATTAGATACT+AGG | + | chr4.3:5924383-5924402 | MS.gene048814:intron | 40.0% | |
| CAGATTGTTTGGATGAGTCA+TGG | + | chr4.3:5922407-5922426 | MS.gene048814:CDS | 40.0% | |
| GACATTATGATGGCTCTTGA+TGG | - | chr4.3:5923411-5923430 | None:intergenic | 40.0% | |
| GACCATAAAATTTGGCAGAG+GGG | - | chr4.3:5922511-5922530 | None:intergenic | 40.0% | |
| GCACAAATGACATGTTCATC+AGG | - | chr4.3:5922901-5922920 | None:intergenic | 40.0% | |
| GGCATGATTCAATCACATCA+GGG | - | chr4.3:5923355-5923374 | None:intergenic | 40.0% | |
| GGTACCAAATTACCATTAGG+AGG | + | chr4.3:5924119-5924138 | MS.gene048814:intron | 40.0% | |
| GTAAGATCTGTTGGAGTTCA+AGG | + | chr4.3:5923919-5923938 | MS.gene048814:CDS | 40.0% | |
| TATGCATATGGCTATGATGC+TGG | + | chr4.3:5924032-5924051 | MS.gene048814:intron | 40.0% | |
| TGAACTCCAACAGATCTTAC+TGG | - | chr4.3:5923919-5923938 | None:intergenic | 40.0% | |
| TGACAGATCCTGAAGTAAAG+AGG | + | chr4.3:5923225-5923244 | MS.gene048814:CDS | 40.0% | |
| TGTCTATAGGTATAAGGAGC+AGG | + | chr4.3:5923112-5923131 | MS.gene048814:intron | 40.0% | |
| TTATGTCCAACTTTCTCAGC+AGG | - | chr4.3:5922386-5922405 | None:intergenic | 40.0% | |
| TTCAATCACATCAGGGTACA+AGG | - | chr4.3:5923348-5923367 | None:intergenic | 40.0% | |
| TTCATAAAGCCATTGGCGAT+AGG | + | chr4.3:5922962-5922981 | MS.gene048814:CDS | 40.0% | |
| ! | AACCCCTCTGCCAAATTTTA+TGG | + | chr4.3:5922506-5922525 | MS.gene048814:CDS | 40.0% |
| ! | ATGATGGCTCTTGATGGTAT+GGG | - | chr4.3:5923405-5923424 | None:intergenic | 40.0% |
| ! | CATGTCATTTGTGCCTTATC+TGG | + | chr4.3:5922907-5922926 | MS.gene048814:CDS | 40.0% |
| ! | CTGGCCTTTATGACGTAATA+TGG | + | chr4.3:5923872-5923891 | MS.gene048814:CDS | 40.0% |
| ! | CTTTTTCCTGCTGAGAAAGT+TGG | + | chr4.3:5922377-5922396 | MS.gene048814:CDS | 40.0% |
| ! | TAAAGGTACGTCAATTAGGG+AGG | + | chr4.3:5923613-5923632 | MS.gene048814:intron | 40.0% |
| ! | TATGATGGCTCTTGATGGTA+TGG | - | chr4.3:5923406-5923425 | None:intergenic | 40.0% |
| !! | CATTCCATCTTGACTTGTCA+CGG | - | chr4.3:5923983-5924002 | None:intergenic | 40.0% |
| !! | GCCAATGGCTTTATGAACTA+TGG | - | chr4.3:5922959-5922978 | None:intergenic | 40.0% |
| !!! | GACGTTTTAGAAATCCCTCA+GGG | - | chr4.3:5923650-5923669 | None:intergenic | 40.0% |
| !!! | TGACGTTTTAGAAATCCCTC+AGG | - | chr4.3:5923651-5923670 | None:intergenic | 40.0% |
| AACTATGGTAGCAGCAACAG+TGG | - | chr4.3:5922944-5922963 | None:intergenic | 45.0% | |
| AAGAGCCATCATAATGTCGG+TGG | + | chr4.3:5923413-5923432 | MS.gene048814:CDS | 45.0% | |
| AAGATGGAATGACAGCAGAC+TGG | + | chr4.3:5923992-5924011 | MS.gene048814:CDS | 45.0% | |
| ACAATGAAGCCTATCGCCAA+TGG | - | chr4.3:5922974-5922993 | None:intergenic | 45.0% | |
| ACGTCAATTAGGGAGGATCA+TGG | + | chr4.3:5923620-5923639 | MS.gene048814:CDS | 45.0% | |
| AGAACTCTAACTGCAAGACC+AGG | - | chr4.3:5923687-5923706 | None:intergenic | 45.0% | |
| AGCCTCCTTCAACAATTGAG+TGG | + | chr4.3:5924671-5924690 | MS.gene048814:CDS | 45.0% | |
| CAAAAGCTCCATGTACCTGT+CGG | - | chr4.3:5923746-5923765 | None:intergenic | 45.0% | |
| CAGACCTTCTTACTTGGTTC+AGG | + | chr4.3:5923319-5923338 | MS.gene048814:CDS | 45.0% | |
| CTTGTGCTCAAAGTAGTACC+TGG | - | chr4.3:5924575-5924594 | None:intergenic | 45.0% | |
| GAAGACCACCGACATTATGA+TGG | - | chr4.3:5923421-5923440 | None:intergenic | 45.0% | |
| GAAGCTGTTACTCTTCCTTC+TGG | + | chr4.3:5922434-5922453 | MS.gene048814:CDS | 45.0% | |
| GATGTTTGTGGGATTTCAGC+AGG | + | chr4.3:5922817-5922836 | MS.gene048814:CDS | 45.0% | |
| GCCTCCTTCAACAATTGAGT+GGG | + | chr4.3:5924672-5924691 | MS.gene048814:CDS | 45.0% | |
| GGAATCAACACCACCAGATA+AGG | - | chr4.3:5922923-5922942 | None:intergenic | 45.0% | |
| GGGCATGATTCAATCACATC+AGG | - | chr4.3:5923356-5923375 | None:intergenic | 45.0% | |
| GGTCTTGCAGTTAGAGTTCT+GGG | + | chr4.3:5923687-5923706 | MS.gene048814:CDS | 45.0% | |
| GTATGGCCGGATGGAAATTA+AGG | + | chr4.3:5922337-5922356 | MS.gene048814:CDS | 45.0% | |
| GTCATTTGTGCCTTATCTGG+TGG | + | chr4.3:5922910-5922929 | MS.gene048814:CDS | 45.0% | |
| GTTCCCTGAACCAAGTAAGA+AGG | - | chr4.3:5923326-5923345 | None:intergenic | 45.0% | |
| GTTGAGGCAGAGAGAGAAAA+CGG | - | chr4.3:5922099-5922118 | None:intergenic | 45.0% | |
| TAAAACGTCATCCCTTCCCT+GGG | + | chr4.3:5923661-5923680 | MS.gene048814:CDS | 45.0% | |
| TAATGTCGGTGGTCTTCCAA+AGG | + | chr4.3:5923424-5923443 | MS.gene048814:CDS | 45.0% | |
| TCCAATGCAGTTCCTGTTCT+CGG | + | chr4.3:5922245-5922264 | MS.gene048814:CDS | 45.0% | |
| TCCCACTCAATTGTTGAAGG+AGG | - | chr4.3:5924676-5924695 | None:intergenic | 45.0% | |
| TGGAAGCAGACCTTCTTACT+TGG | + | chr4.3:5923313-5923332 | MS.gene048814:CDS | 45.0% | |
| TGTATTGAGAACCGAAGTCG+AGG | - | chr4.3:5922043-5922062 | None:intergenic | 45.0% | |
| TTCAGTGTTTCCATTCCCTC+CGG | - | chr4.3:5922784-5922803 | None:intergenic | 45.0% | |
| ! | CTAGTTCTCATCCTCGACTT+CGG | + | chr4.3:5922029-5922048 | MS.gene048814:CDS | 45.0% |
| ! | GCTCTTGATGGTATGGGAAT+GGG | - | chr4.3:5923399-5923418 | None:intergenic | 45.0% |
| ! | GTTTTCTCTCTCTGCCTCAA+CGG | + | chr4.3:5922098-5922117 | MS.gene048814:CDS | 45.0% |
| ! | TGGTCTTGCAGTTAGAGTTC+TGG | + | chr4.3:5923686-5923705 | MS.gene048814:CDS | 45.0% |
| !! | TCCTTCTGGTTTCAATGTCG+TGG | + | chr4.3:5922448-5922467 | MS.gene048814:CDS | 45.0% |
| !!! | GAAAAAGAGCAGAGGCGTTT+TGG | - | chr4.3:5922364-5922383 | None:intergenic | 45.0% |
| AAACGGAGAGGCTTCGGATA+CGG | - | chr4.3:5922082-5922101 | None:intergenic | 50.0% | |
| ACCGAGAACAGGAACTGCAT+TGG | - | chr4.3:5922249-5922268 | None:intergenic | 50.0% | |
| ACTAGGGTCGTTATGCTCCT+TGG | + | chr4.3:5924400-5924419 | MS.gene048814:intron | 50.0% | |
| AGAGCCGTGACAAGTCAAGA+TGG | + | chr4.3:5923976-5923995 | MS.gene048814:CDS | 50.0% | |
| AGCCCATTGAAGAAAGCCGT+CGG | - | chr4.3:5922222-5922241 | None:intergenic | 50.0% | |
| AGGATCATGGATGTCCCTGA+GGG | + | chr4.3:5923633-5923652 | MS.gene048814:CDS | 50.0% | |
| ATTGAATCATGCCCACCACC+TGG | + | chr4.3:5923362-5923381 | MS.gene048814:CDS | 50.0% | |
| CAGCTTCTTGTTAGCCGTCT+CGG | + | chr4.3:5922284-5922303 | MS.gene048814:CDS | 50.0% | |
| CCTGTTCTCGGTATCTGCTA+CGG | + | chr4.3:5922257-5922276 | MS.gene048814:CDS | 50.0% | |
| CGAAGTCGAGGATGAGAACT+AGG | - | chr4.3:5922031-5922050 | None:intergenic | 50.0% | |
| CGTGACTGAAGGAAATGCCT+TGG | + | chr4.3:5923713-5923732 | MS.gene048814:CDS | 50.0% | |
| CTAAAACGTCATCCCTTCCC+TGG | + | chr4.3:5923660-5923679 | MS.gene048814:CDS | 50.0% | |
| CTCAGCAGGAAAAAGAGCAG+AGG | - | chr4.3:5922372-5922391 | None:intergenic | 50.0% | |
| GAAGATGGAGGATGTGTTGG+AGG | + | chr4.3:5922843-5922862 | MS.gene048814:CDS | 50.0% | |
| GAGAGAAAACGGAGAGGCTT+CGG | - | chr4.3:5922088-5922107 | None:intergenic | 50.0% | |
| GATGTTCTCCGACAGGTACA+TGG | + | chr4.3:5923735-5923754 | MS.gene048814:intron | 50.0% | |
| GATTTCAGCAGGGTGGAAGA+TGG | + | chr4.3:5922828-5922847 | MS.gene048814:CDS | 50.0% | |
| GCACAACACGATTCACACCA+CGG | - | chr4.3:5924636-5924655 | None:intergenic | 50.0% | |
| GCAGCATCAACACACTCAAC+TGG | - | chr4.3:5923176-5923195 | None:intergenic | 50.0% | |
| GCCACGACATTGAAACCAGA+AGG | - | chr4.3:5922452-5922471 | None:intergenic | 50.0% | |
| GTGGAAGATGGAGGATGTGT+TGG | + | chr4.3:5922840-5922859 | MS.gene048814:CDS | 50.0% | |
| GTTGGAAACACGCAGGAGTA+TGG | + | chr4.3:5922320-5922339 | MS.gene048814:CDS | 50.0% | |
| TAAGGAGCAGGAACGTGTGA+TGG | + | chr4.3:5923124-5923143 | MS.gene048814:CDS | 50.0% | |
| TACCTGTCGGAGAACATCCA+AGG | - | chr4.3:5923733-5923752 | None:intergenic | 50.0% | |
| TGGTCTTCAGTATCACCCTG+AGG | + | chr4.3:5922526-5922545 | MS.gene048814:CDS | 50.0% | |
| TTTGTGGGATTTCAGCAGGG+TGG | + | chr4.3:5922821-5922840 | MS.gene048814:CDS | 50.0% | |
| ! | GGCTCTTGATGGTATGGGAA+TGG | - | chr4.3:5923400-5923419 | None:intergenic | 50.0% |
| ! | TTTTCCCACTTCCAGGTGGT+GGG | - | chr4.3:5923376-5923395 | None:intergenic | 50.0% |
| !! | GAAGAGAAGAAGTGCCGTTG+AGG | - | chr4.3:5922115-5922134 | None:intergenic | 50.0% |
| !! | GAATGGGTTTTCCCACTTCC+AGG | - | chr4.3:5923383-5923402 | None:intergenic | 50.0% |
| !! | GGCTCTGAGTGCAACAACAT+GGG | - | chr4.3:5923962-5923981 | None:intergenic | 50.0% |
| !! | TCGTTGACAATGGCTTGCTC+AGG | + | chr4.3:5922998-5923017 | MS.gene048814:CDS | 50.0% |
| AAGGTGACTCATACGCCGGA+GGG | + | chr4.3:5922766-5922785 | MS.gene048814:intron | 55.0% | |
| ACCACCGGAGAGAATGACGA+GGG | - | chr4.3:5922162-5922181 | None:intergenic | 55.0% | |
| AGTTCGCGTTGGAAACACGC+AGG | + | chr4.3:5922313-5922332 | MS.gene048814:CDS | 55.0% | |
| CCCATTGAAGAAAGCCGTCG+GGG | - | chr4.3:5922220-5922239 | None:intergenic | 55.0% | |
| CCCCGACGGCTTTCTTCAAT+GGG | + | chr4.3:5922217-5922236 | MS.gene048814:CDS | 55.0% | |
| CCGTAGCAGATACCGAGAAC+AGG | - | chr4.3:5922260-5922279 | None:intergenic | 55.0% | |
| CTTCTTGTTAGCCGTCTCGG+CGG | + | chr4.3:5922287-5922306 | MS.gene048814:CDS | 55.0% | |
| GAGGATCATGGATGTCCCTG+AGG | + | chr4.3:5923632-5923651 | MS.gene048814:CDS | 55.0% | |
| GCCCATTGAAGAAAGCCGTC+GGG | - | chr4.3:5922221-5922240 | None:intergenic | 55.0% | |
| GGAGGGGTTGAGTTCAGTGA+TGG | - | chr4.3:5922141-5922160 | None:intergenic | 55.0% | |
| GGCAGAGAGAGAAAACGGAG+AGG | - | chr4.3:5922094-5922113 | None:intergenic | 55.0% | |
| GTCGTGGCACGAAGTCAACA+AGG | + | chr4.3:5922464-5922483 | MS.gene048814:CDS | 55.0% | |
| TAACTGCAAGACCAGGCCCA+GGG | - | chr4.3:5923680-5923699 | None:intergenic | 55.0% | |
| TCCCCGACGGCTTTCTTCAA+TGG | + | chr4.3:5922216-5922235 | MS.gene048814:CDS | 55.0% | |
| TGCCTTGGATGTTCTCCGAC+AGG | + | chr4.3:5923728-5923747 | MS.gene048814:CDS | 55.0% | |
| TGGGAAGGTGACTCATACGC+CGG | + | chr4.3:5922762-5922781 | MS.gene048814:intron | 55.0% | |
| TTCAGCAGGGTGGAAGATGG+AGG | + | chr4.3:5922831-5922850 | MS.gene048814:CDS | 55.0% | |
| TTCGGATACGGCGAGTGATG+AGG | - | chr4.3:5922070-5922089 | None:intergenic | 55.0% | |
| TTGAAGAAAGCCGTCGGGGA+AGG | - | chr4.3:5922216-5922235 | None:intergenic | 55.0% | |
| TTTGGCAGAGGGGTTCTCGA+TGG | - | chr4.3:5922501-5922520 | None:intergenic | 55.0% | |
| ! | AATCGGGAGTGTGAACGGAG+TGG | - | chr4.3:5922187-5922206 | None:intergenic | 55.0% |
| ! | AGGGGAATCGGGAGTGTGAA+CGG | - | chr4.3:5922192-5922211 | None:intergenic | 55.0% |
| ! | ATCGGGAGTGTGAACGGAGT+GGG | - | chr4.3:5922186-5922205 | None:intergenic | 55.0% |
| ! | GAAACACGCAGGAGTATGGC+CGG | + | chr4.3:5922324-5922343 | MS.gene048814:CDS | 55.0% |
| ! | GCTCAGGTGACCACTAGTCT+CGG | + | chr4.3:5923014-5923033 | MS.gene048814:intron | 55.0% |
| ! | GTTCTGGGTGACGTGACTGA+AGG | + | chr4.3:5923702-5923721 | MS.gene048814:CDS | 55.0% |
| ! | GTTTTCCCACTTCCAGGTGG+TGG | - | chr4.3:5923377-5923396 | None:intergenic | 55.0% |
| ! | TGGGTTTTCCCACTTCCAGG+TGG | - | chr4.3:5923380-5923399 | None:intergenic | 55.0% |
| !! | CGGCTCTGAGTGCAACAACA+TGG | - | chr4.3:5923963-5923982 | None:intergenic | 55.0% |
| AAAGCCGTCGGGGAAGGAAG+GGG | - | chr4.3:5922210-5922229 | None:intergenic | 60.0% | |
| ACCGGAGAGAATGACGAGGG+AGG | - | chr4.3:5922159-5922178 | None:intergenic | 60.0% | |
| AGAAAGCCGTCGGGGAAGGA+AGG | - | chr4.3:5922212-5922231 | None:intergenic | 60.0% | |
| CATGCCCACCACCTGGAAGT+GGG | + | chr4.3:5923369-5923388 | MS.gene048814:CDS | 60.0% | |
| CCCTCCCTCGTCATTCTCTC+CGG | + | chr4.3:5922155-5922174 | MS.gene048814:CDS | 60.0% | |
| CCGGAGAGAATGACGAGGGA+GGG | - | chr4.3:5922158-5922177 | None:intergenic | 60.0% | |
| CGGAGAGAATGACGAGGGAG+GGG | - | chr4.3:5922157-5922176 | None:intergenic | 60.0% | |
| CTAACTGCAAGACCAGGCCC+AGG | - | chr4.3:5923681-5923700 | None:intergenic | 60.0% | |
| GAAAGCCGTCGGGGAAGGAA+GGG | - | chr4.3:5922211-5922230 | None:intergenic | 60.0% | |
| GAAGGTGACTCATACGCCGG+AGG | + | chr4.3:5922765-5922784 | MS.gene048814:intron | 60.0% | |
| GACCACCGGAGAGAATGACG+AGG | - | chr4.3:5922163-5922182 | None:intergenic | 60.0% | |
| GACTCATACGCCGGAGGGAA+TGG | + | chr4.3:5922771-5922790 | MS.gene048814:CDS | 60.0% | |
| GATTCCCCTTCCTTCCCCGA+CGG | + | chr4.3:5922203-5922222 | MS.gene048814:CDS | 60.0% | |
| GTCGGGGAAGGAAGGGGAAT+CGG | - | chr4.3:5922204-5922223 | None:intergenic | 60.0% | |
| TCATGCCCACCACCTGGAAG+TGG | + | chr4.3:5923368-5923387 | MS.gene048814:CDS | 60.0% | |
| TCCCTCGTCATTCTCTCCGG+TGG | + | chr4.3:5922158-5922177 | MS.gene048814:CDS | 60.0% | |
| TCGGGGAAGGAAGGGGAATC+GGG | - | chr4.3:5922203-5922222 | None:intergenic | 60.0% | |
| ! | TCGGGAGTGTGAACGGAGTG+GGG | - | chr4.3:5922185-5922204 | None:intergenic | 60.0% |
| CGCGAACTTCACCGCCGAGA+CGG | - | chr4.3:5922301-5922320 | None:intergenic | 65.0% | |
| CTCGGCGGTGAAGTTCGCGT+TGG | + | chr4.3:5922302-5922321 | MS.gene048814:CDS | 65.0% | |
| GCAAGACCAGGCCCAGGGAA+GGG | - | chr4.3:5923675-5923694 | None:intergenic | 65.0% | |
| GGGGTTCTCGATGGCAGCGA+CGG | - | chr4.3:5922492-5922511 | None:intergenic | 65.0% | |
| GTGAACGGAGTGGGGACCAC+CGG | - | chr4.3:5922177-5922196 | None:intergenic | 65.0% | |
| TGCAAGACCAGGCCCAGGGA+AGG | - | chr4.3:5923676-5923695 | None:intergenic | 65.0% | |
| ! | CACGCAGGAGTATGGCCGGA+TGG | + | chr4.3:5922328-5922347 | MS.gene048814:CDS | 65.0% |
| CGTCATCCCTTCCCTGGGCC+TGG | + | chr4.3:5923666-5923685 | MS.gene048814:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 5921996 | 5924699 | 5921996 | ID=MS.gene048814 |
| chr4.3 | mRNA | 5921996 | 5924699 | 5921996 | ID=MS.gene048814.t1;Parent=MS.gene048814 |
| chr4.3 | exon | 5921996 | 5922547 | 5921996 | ID=MS.gene048814.t1.exon1;Parent=MS.gene048814.t1 |
| chr4.3 | CDS | 5921996 | 5922547 | 5921996 | ID=cds.MS.gene048814.t1;Parent=MS.gene048814.t1 |
| chr4.3 | exon | 5922769 | 5923019 | 5922769 | ID=MS.gene048814.t1.exon2;Parent=MS.gene048814.t1 |
| chr4.3 | CDS | 5922769 | 5923019 | 5922769 | ID=cds.MS.gene048814.t1;Parent=MS.gene048814.t1 |
| chr4.3 | exon | 5923121 | 5923496 | 5923121 | ID=MS.gene048814.t1.exon3;Parent=MS.gene048814.t1 |
| chr4.3 | CDS | 5923121 | 5923496 | 5923121 | ID=cds.MS.gene048814.t1;Parent=MS.gene048814.t1 |
| chr4.3 | exon | 5923618 | 5923749 | 5923618 | ID=MS.gene048814.t1.exon4;Parent=MS.gene048814.t1 |
| chr4.3 | CDS | 5923618 | 5923749 | 5923618 | ID=cds.MS.gene048814.t1;Parent=MS.gene048814.t1 |
| chr4.3 | exon | 5923838 | 5924013 | 5923838 | ID=MS.gene048814.t1.exon5;Parent=MS.gene048814.t1 |
| chr4.3 | CDS | 5923838 | 5924013 | 5923838 | ID=cds.MS.gene048814.t1;Parent=MS.gene048814.t1 |
| chr4.3 | exon | 5924576 | 5924699 | 5924576 | ID=MS.gene048814.t1.exon6;Parent=MS.gene048814.t1 |
| chr4.3 | CDS | 5924576 | 5924699 | 5924576 | ID=cds.MS.gene048814.t1;Parent=MS.gene048814.t1 |
| Gene Sequence |
| Protein sequence |
