Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049240.t1 | XP_003602683.1 | 99.3 | 292 | 2 | 0 | 1 | 292 | 1 | 292 | 1.60E-172 | 615.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049240.t1 | Q9C598 | 67.2 | 256 | 56 | 8 | 1 | 249 | 1 | 235 | 1.6e-88 | 327.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049240.t1 | B7FJL7 | 99.3 | 292 | 2 | 0 | 1 | 292 | 1 | 292 | 1.2e-172 | 615.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene049240.t1 | TF | NAC |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049240 | MS.gene06361 | 0.973478 | 1.70E-136 | -1.69E-46 |
| MS.gene049240 | MS.gene40935 | 0.987567 | 1.00E-170 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049240.t1 | MTR_3g096920 | 99.315 | 292 | 2 | 0 | 1 | 292 | 1 | 292 | 0.0 | 610 |
| MS.gene049240.t1 | MTR_3g096920 | 88.146 | 329 | 2 | 1 | 1 | 292 | 1 | 329 | 0.0 | 592 |
| MS.gene049240.t1 | MTR_8g094580 | 70.847 | 295 | 65 | 8 | 1 | 287 | 1 | 282 | 3.01e-143 | 404 |
| MS.gene049240.t1 | MTR_3g088110 | 62.215 | 307 | 82 | 9 | 1 | 292 | 1 | 288 | 3.37e-124 | 356 |
| MS.gene049240.t1 | MTR_8g094580 | 68.465 | 241 | 55 | 8 | 55 | 287 | 1 | 228 | 2.66e-104 | 303 |
| MS.gene049240.t1 | MTR_2g079990 | 44.912 | 285 | 133 | 5 | 3 | 276 | 12 | 283 | 4.74e-74 | 231 |
| MS.gene049240.t1 | MTR_2g080010 | 67.284 | 162 | 42 | 3 | 7 | 157 | 15 | 176 | 5.06e-74 | 231 |
| MS.gene049240.t1 | MTR_8g059170 | 67.683 | 164 | 45 | 3 | 4 | 163 | 11 | 170 | 2.60e-73 | 228 |
| MS.gene049240.t1 | MTR_2157s0010 | 63.804 | 163 | 49 | 2 | 7 | 159 | 8 | 170 | 1.16e-71 | 222 |
| MS.gene049240.t1 | MTR_4g089135 | 60.317 | 189 | 44 | 4 | 7 | 171 | 15 | 196 | 6.36e-71 | 223 |
| MS.gene049240.t1 | MTR_2g079990 | 41.613 | 310 | 135 | 5 | 3 | 276 | 12 | 311 | 9.21e-71 | 223 |
| MS.gene049240.t1 | MTR_5g041940 | 50.926 | 216 | 99 | 5 | 5 | 214 | 1 | 215 | 9.56e-70 | 217 |
| MS.gene049240.t1 | MTR_7g085220 | 56.989 | 186 | 68 | 3 | 4 | 178 | 5 | 189 | 4.55e-69 | 218 |
| MS.gene049240.t1 | MTR_4g081870 | 63.226 | 155 | 55 | 2 | 6 | 158 | 8 | 162 | 8.21e-69 | 215 |
| MS.gene049240.t1 | MTR_2g093810 | 60.645 | 155 | 57 | 2 | 7 | 157 | 14 | 168 | 1.05e-65 | 208 |
| MS.gene049240.t1 | MTR_7g100990 | 56.790 | 162 | 66 | 2 | 2 | 159 | 6 | 167 | 4.58e-64 | 204 |
| MS.gene049240.t1 | MTR_2g064090 | 44.351 | 239 | 114 | 7 | 5 | 228 | 4 | 238 | 2.43e-59 | 193 |
| MS.gene049240.t1 | MTR_6g477900 | 54.487 | 156 | 65 | 3 | 7 | 159 | 6 | 158 | 6.51e-57 | 183 |
| MS.gene049240.t1 | MTR_6g011860 | 50.909 | 165 | 73 | 2 | 6 | 162 | 14 | 178 | 2.15e-54 | 181 |
| MS.gene049240.t1 | MTR_5g040420 | 52.229 | 157 | 67 | 2 | 9 | 157 | 16 | 172 | 4.26e-54 | 181 |
| MS.gene049240.t1 | MTR_6g084430 | 54.601 | 163 | 64 | 3 | 4 | 163 | 2 | 157 | 1.43e-53 | 177 |
| MS.gene049240.t1 | MTR_5g021710 | 49.133 | 173 | 71 | 4 | 7 | 167 | 8 | 175 | 2.44e-53 | 177 |
| MS.gene049240.t1 | MTR_3g070030 | 50.303 | 165 | 81 | 1 | 4 | 167 | 16 | 180 | 2.63e-53 | 177 |
| MS.gene049240.t1 | MTR_8g467490 | 48.824 | 170 | 78 | 3 | 9 | 169 | 16 | 185 | 3.65e-53 | 178 |
| MS.gene049240.t1 | MTR_4g036030 | 48.824 | 170 | 76 | 4 | 7 | 170 | 7 | 171 | 4.33e-53 | 177 |
| MS.gene049240.t1 | MTR_6g012670 | 52.866 | 157 | 72 | 2 | 4 | 159 | 17 | 172 | 4.50e-53 | 176 |
| MS.gene049240.t1 | MTR_4g108760 | 49.432 | 176 | 75 | 3 | 4 | 172 | 14 | 182 | 4.80e-53 | 177 |
| MS.gene049240.t1 | MTR_4g134460 | 53.595 | 153 | 64 | 2 | 9 | 159 | 56 | 203 | 1.30e-52 | 178 |
| MS.gene049240.t1 | MTR_5g076850 | 49.457 | 184 | 79 | 5 | 5 | 177 | 4 | 184 | 1.56e-52 | 182 |
| MS.gene049240.t1 | MTR_3g064580 | 46.829 | 205 | 96 | 5 | 5 | 206 | 4 | 198 | 1.89e-52 | 182 |
| MS.gene049240.t1 | MTR_8g076110 | 49.375 | 160 | 72 | 3 | 7 | 162 | 6 | 160 | 2.46e-52 | 174 |
| MS.gene049240.t1 | MTR_2g062730 | 50.932 | 161 | 69 | 3 | 3 | 158 | 6 | 161 | 2.62e-52 | 174 |
| MS.gene049240.t1 | MTR_5g012080 | 49.682 | 157 | 70 | 3 | 7 | 158 | 7 | 159 | 1.69e-51 | 172 |
| MS.gene049240.t1 | MTR_5g014300 | 51.786 | 168 | 65 | 4 | 3 | 160 | 2 | 163 | 2.83e-51 | 172 |
| MS.gene049240.t1 | MTR_3g109340 | 50.000 | 164 | 75 | 3 | 4 | 164 | 19 | 178 | 3.52e-51 | 172 |
| MS.gene049240.t1 | MTR_3g109340 | 50.000 | 164 | 74 | 3 | 4 | 164 | 19 | 177 | 7.10e-51 | 171 |
| MS.gene049240.t1 | MTR_4g101680 | 48.780 | 164 | 74 | 4 | 7 | 165 | 7 | 165 | 7.64e-51 | 171 |
| MS.gene049240.t1 | MTR_4g035590 | 52.564 | 156 | 64 | 3 | 7 | 158 | 8 | 157 | 1.07e-50 | 171 |
| MS.gene049240.t1 | MTR_3g435150 | 42.424 | 231 | 97 | 5 | 4 | 227 | 13 | 214 | 1.13e-50 | 169 |
| MS.gene049240.t1 | MTR_2g078700 | 53.896 | 154 | 67 | 2 | 7 | 157 | 23 | 175 | 1.46e-50 | 171 |
| MS.gene049240.t1 | MTR_8g024480 | 40.196 | 204 | 112 | 4 | 1 | 194 | 9 | 212 | 5.77e-50 | 171 |
| MS.gene049240.t1 | MTR_7g085260 | 50.000 | 164 | 76 | 2 | 5 | 163 | 15 | 177 | 1.50e-49 | 168 |
| MS.gene049240.t1 | MTR_1g096430 | 49.068 | 161 | 73 | 3 | 1 | 157 | 1 | 156 | 4.57e-49 | 166 |
| MS.gene049240.t1 | MTR_1g008740 | 48.235 | 170 | 80 | 4 | 4 | 169 | 24 | 189 | 4.62e-49 | 167 |
| MS.gene049240.t1 | MTR_6g032770 | 49.398 | 166 | 80 | 2 | 5 | 167 | 16 | 180 | 4.68e-49 | 167 |
| MS.gene049240.t1 | MTR_1g008740 | 48.235 | 170 | 80 | 4 | 4 | 169 | 10 | 175 | 5.01e-49 | 166 |
| MS.gene049240.t1 | MTR_7g005280 | 54.088 | 159 | 62 | 3 | 3 | 158 | 11 | 161 | 5.88e-49 | 163 |
| MS.gene049240.t1 | MTR_1g069805 | 50.625 | 160 | 66 | 4 | 7 | 162 | 10 | 160 | 1.48e-48 | 163 |
| MS.gene049240.t1 | MTR_5g090970 | 36.996 | 273 | 130 | 7 | 9 | 248 | 20 | 283 | 1.56e-48 | 164 |
| MS.gene049240.t1 | MTR_5g069030 | 46.500 | 200 | 90 | 5 | 7 | 194 | 25 | 219 | 5.80e-48 | 169 |
| MS.gene049240.t1 | MTR_7g011120 | 46.552 | 174 | 80 | 3 | 4 | 167 | 5 | 175 | 7.70e-48 | 162 |
| MS.gene049240.t1 | MTR_4g098630 | 48.276 | 174 | 80 | 4 | 1 | 168 | 1 | 170 | 2.86e-47 | 160 |
| MS.gene049240.t1 | MTR_7g011130 | 45.763 | 177 | 83 | 3 | 4 | 167 | 16 | 192 | 6.12e-47 | 161 |
| MS.gene049240.t1 | MTR_7g097090 | 50.000 | 154 | 65 | 3 | 7 | 156 | 10 | 155 | 6.81e-47 | 159 |
| MS.gene049240.t1 | MTR_5g090970 | 36.996 | 273 | 129 | 8 | 9 | 248 | 20 | 282 | 9.16e-47 | 159 |
| MS.gene049240.t1 | MTR_2g068880 | 40.265 | 226 | 117 | 7 | 1 | 210 | 15 | 238 | 2.89e-46 | 158 |
| MS.gene049240.t1 | MTR_2g064470 | 39.764 | 254 | 123 | 10 | 4 | 231 | 8 | 257 | 3.73e-46 | 157 |
| MS.gene049240.t1 | MTR_3g116070 | 51.299 | 154 | 64 | 3 | 2 | 144 | 18 | 171 | 3.53e-45 | 156 |
| MS.gene049240.t1 | MTR_3g093050 | 45.745 | 188 | 79 | 7 | 7 | 179 | 22 | 201 | 1.20e-44 | 159 |
| MS.gene049240.t1 | MTR_2g068920 | 48.466 | 163 | 70 | 5 | 9 | 157 | 23 | 185 | 1.37e-44 | 153 |
| MS.gene049240.t1 | MTR_3g093050 | 45.455 | 187 | 81 | 6 | 7 | 179 | 22 | 201 | 1.46e-44 | 160 |
| MS.gene049240.t1 | MTR_8g099750 | 45.714 | 175 | 84 | 5 | 3 | 170 | 10 | 180 | 9.46e-44 | 149 |
| MS.gene049240.t1 | MTR_3g096140 | 46.753 | 154 | 76 | 3 | 9 | 159 | 9 | 159 | 2.15e-43 | 149 |
| MS.gene049240.t1 | MTR_4g075980 | 41.530 | 183 | 83 | 3 | 9 | 187 | 17 | 179 | 1.18e-42 | 148 |
| MS.gene049240.t1 | MTR_3g096140 | 46.753 | 154 | 76 | 3 | 9 | 159 | 9 | 159 | 1.37e-42 | 149 |
| MS.gene049240.t1 | MTR_1g090720 | 48.408 | 157 | 75 | 3 | 7 | 157 | 42 | 198 | 1.77e-42 | 152 |
| MS.gene049240.t1 | MTR_1g097300 | 48.052 | 154 | 74 | 3 | 9 | 159 | 21 | 171 | 3.31e-42 | 152 |
| MS.gene049240.t1 | MTR_3g093040 | 46.250 | 160 | 72 | 6 | 5 | 157 | 106 | 258 | 4.47e-42 | 147 |
| MS.gene049240.t1 | MTR_2g086880 | 41.709 | 199 | 94 | 7 | 9 | 195 | 20 | 208 | 4.59e-42 | 151 |
| MS.gene049240.t1 | MTR_2g086880 | 44.571 | 175 | 83 | 6 | 9 | 179 | 20 | 184 | 5.69e-42 | 152 |
| MS.gene049240.t1 | MTR_3g098810 | 47.590 | 166 | 73 | 4 | 3 | 158 | 10 | 171 | 7.31e-42 | 144 |
| MS.gene049240.t1 | MTR_8g063550 | 43.949 | 157 | 82 | 3 | 6 | 159 | 5 | 158 | 2.38e-41 | 146 |
| MS.gene049240.t1 | MTR_8g063550 | 43.949 | 157 | 82 | 3 | 6 | 159 | 5 | 158 | 3.07e-41 | 148 |
| MS.gene049240.t1 | MTR_8g063550 | 43.949 | 157 | 82 | 3 | 6 | 159 | 5 | 158 | 4.55e-41 | 147 |
| MS.gene049240.t1 | MTR_1g090723 | 46.154 | 156 | 77 | 5 | 9 | 160 | 10 | 162 | 6.22e-40 | 147 |
| MS.gene049240.t1 | MTR_3g070040 | 46.667 | 150 | 75 | 3 | 11 | 158 | 12 | 158 | 1.50e-39 | 141 |
| MS.gene049240.t1 | MTR_8g023840 | 50.968 | 155 | 61 | 6 | 6 | 154 | 10 | 155 | 2.11e-39 | 142 |
| MS.gene049240.t1 | MTR_1g090723 | 46.154 | 156 | 76 | 5 | 9 | 160 | 10 | 161 | 2.57e-39 | 145 |
| MS.gene049240.t1 | MTR_1g090723 | 46.154 | 156 | 76 | 5 | 9 | 160 | 10 | 161 | 2.89e-39 | 145 |
| MS.gene049240.t1 | MTR_0036s0150 | 48.077 | 156 | 73 | 5 | 9 | 160 | 7 | 158 | 3.06e-39 | 144 |
| MS.gene049240.t1 | MTR_8g093580 | 42.675 | 157 | 84 | 4 | 6 | 159 | 5 | 158 | 8.48e-39 | 142 |
| MS.gene049240.t1 | MTR_3g098810 | 48.936 | 141 | 65 | 2 | 3 | 138 | 10 | 148 | 1.46e-37 | 131 |
| MS.gene049240.t1 | MTR_4g052620 | 34.413 | 247 | 135 | 6 | 7 | 232 | 5 | 245 | 1.48e-36 | 131 |
| MS.gene049240.t1 | MTR_7g105170 | 34.483 | 232 | 127 | 8 | 7 | 223 | 4 | 225 | 1.02e-35 | 129 |
| MS.gene049240.t1 | MTR_2g086690 | 34.298 | 242 | 142 | 8 | 8 | 237 | 5 | 241 | 2.48e-33 | 122 |
| MS.gene049240.t1 | MTR_3g096140 | 42.857 | 140 | 74 | 3 | 23 | 159 | 2 | 138 | 3.32e-33 | 124 |
| MS.gene049240.t1 | MTR_8g023860 | 42.857 | 154 | 73 | 5 | 7 | 154 | 12 | 156 | 2.53e-32 | 124 |
| MS.gene049240.t1 | MTR_8g023930 | 43.750 | 160 | 75 | 5 | 7 | 160 | 24 | 174 | 4.28e-32 | 124 |
| MS.gene049240.t1 | MTR_4g094302 | 40.764 | 157 | 79 | 3 | 7 | 157 | 11 | 159 | 1.08e-31 | 116 |
| MS.gene049240.t1 | MTR_8g023900 | 38.830 | 188 | 92 | 7 | 10 | 183 | 196 | 374 | 6.08e-31 | 120 |
| MS.gene049240.t1 | MTR_8g023900 | 43.312 | 157 | 76 | 6 | 7 | 157 | 12 | 161 | 6.47e-30 | 117 |
| MS.gene049240.t1 | MTR_4g094302 | 44.531 | 128 | 60 | 2 | 7 | 131 | 11 | 130 | 1.14e-29 | 110 |
| MS.gene049240.t1 | MTR_8g093790 | 37.349 | 166 | 82 | 5 | 2 | 167 | 5 | 148 | 2.28e-26 | 102 |
| MS.gene049240.t1 | MTR_8g023880 | 37.288 | 177 | 78 | 8 | 1 | 157 | 1 | 164 | 7.44e-24 | 98.2 |
| MS.gene049240.t1 | MTR_7g070140 | 53.409 | 88 | 38 | 1 | 60 | 144 | 17 | 104 | 9.33e-24 | 94.4 |
| MS.gene049240.t1 | MTR_3g096400 | 30.303 | 165 | 99 | 4 | 1 | 155 | 1 | 159 | 3.41e-19 | 84.0 |
| MS.gene049240.t1 | MTR_7g083360 | 31.618 | 136 | 86 | 4 | 3 | 134 | 6 | 138 | 5.46e-18 | 79.3 |
| MS.gene049240.t1 | MTR_7g083330 | 32.836 | 134 | 83 | 4 | 5 | 134 | 16 | 146 | 1.33e-17 | 79.3 |
| MS.gene049240.t1 | MTR_7g083370 | 31.579 | 133 | 84 | 4 | 4 | 132 | 7 | 136 | 1.81e-15 | 72.4 |
| MS.gene049240.t1 | MTR_7g070150 | 42.105 | 76 | 37 | 3 | 103 | 177 | 9 | 78 | 2.88e-13 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049240.t1 | AT1G01720 | 63.667 | 300 | 90 | 9 | 1 | 292 | 1 | 289 | 3.42e-124 | 356 |
| MS.gene049240.t1 | AT5G08790 | 66.409 | 259 | 59 | 8 | 1 | 252 | 1 | 238 | 2.23e-112 | 326 |
| MS.gene049240.t1 | AT5G63790 | 57.383 | 298 | 83 | 7 | 1 | 292 | 44 | 303 | 1.11e-106 | 313 |
| MS.gene049240.t1 | AT5G63790 | 57.383 | 298 | 83 | 7 | 1 | 292 | 54 | 313 | 1.46e-106 | 313 |
| MS.gene049240.t1 | AT1G77450 | 53.929 | 280 | 89 | 4 | 3 | 281 | 6 | 246 | 9.10e-99 | 290 |
| MS.gene049240.t1 | AT4G27410 | 70.323 | 155 | 42 | 2 | 4 | 157 | 11 | 162 | 9.32e-74 | 228 |
| MS.gene049240.t1 | AT3G15500 | 67.081 | 161 | 49 | 2 | 4 | 163 | 11 | 168 | 2.01e-73 | 228 |
| MS.gene049240.t1 | AT1G52890 | 67.081 | 161 | 49 | 2 | 4 | 163 | 11 | 168 | 4.24e-73 | 227 |
| MS.gene049240.t1 | AT1G61110 | 57.292 | 192 | 64 | 3 | 3 | 183 | 12 | 196 | 1.55e-70 | 221 |
| MS.gene049240.t1 | AT4G27410 | 63.372 | 172 | 42 | 3 | 4 | 157 | 11 | 179 | 2.81e-69 | 218 |
| MS.gene049240.t1 | AT1G69490 | 45.660 | 265 | 108 | 7 | 7 | 249 | 9 | 259 | 4.66e-69 | 215 |
| MS.gene049240.t1 | AT3G04070 | 52.358 | 212 | 70 | 4 | 7 | 192 | 10 | 216 | 1.97e-67 | 214 |
| MS.gene049240.t1 | AT3G04070 | 54.500 | 200 | 68 | 4 | 7 | 192 | 10 | 200 | 2.94e-67 | 213 |
| MS.gene049240.t1 | AT3G15510 | 66.667 | 159 | 40 | 4 | 11 | 157 | 21 | 178 | 1.35e-66 | 212 |
| MS.gene049240.t1 | AT1G52880 | 64.968 | 157 | 45 | 2 | 11 | 157 | 21 | 177 | 3.74e-62 | 199 |
| MS.gene049240.t1 | AT5G61430 | 52.941 | 170 | 78 | 2 | 4 | 172 | 13 | 181 | 1.98e-56 | 185 |
| MS.gene049240.t1 | AT5G07680 | 51.445 | 173 | 82 | 2 | 4 | 175 | 14 | 185 | 4.03e-55 | 181 |
| MS.gene049240.t1 | AT3G17730 | 51.534 | 163 | 73 | 4 | 7 | 166 | 6 | 165 | 4.77e-55 | 179 |
| MS.gene049240.t1 | AT5G07680 | 51.744 | 172 | 81 | 2 | 5 | 175 | 1 | 171 | 8.64e-55 | 180 |
| MS.gene049240.t1 | AT3G18400 | 54.037 | 161 | 69 | 2 | 4 | 163 | 2 | 158 | 9.99e-55 | 180 |
| MS.gene049240.t1 | AT5G39820 | 49.143 | 175 | 68 | 3 | 9 | 162 | 22 | 196 | 1.52e-54 | 180 |
| MS.gene049240.t1 | AT2G02450 | 54.248 | 153 | 63 | 2 | 9 | 159 | 53 | 200 | 2.59e-54 | 181 |
| MS.gene049240.t1 | AT2G02450 | 54.248 | 153 | 63 | 2 | 9 | 159 | 53 | 200 | 3.43e-54 | 181 |
| MS.gene049240.t1 | AT5G39610 | 54.321 | 162 | 60 | 3 | 5 | 159 | 18 | 172 | 4.54e-54 | 177 |
| MS.gene049240.t1 | AT2G33480 | 55.696 | 158 | 63 | 3 | 2 | 158 | 10 | 161 | 1.54e-53 | 176 |
| MS.gene049240.t1 | AT1G76420 | 53.416 | 161 | 68 | 3 | 2 | 159 | 17 | 173 | 2.13e-53 | 177 |
| MS.gene049240.t1 | AT2G33480 | 55.696 | 158 | 61 | 3 | 2 | 158 | 10 | 159 | 3.95e-53 | 174 |
| MS.gene049240.t1 | AT2G24430 | 51.220 | 164 | 73 | 2 | 4 | 164 | 13 | 172 | 4.00e-53 | 176 |
| MS.gene049240.t1 | AT2G24430 | 51.220 | 164 | 73 | 2 | 4 | 164 | 13 | 172 | 4.00e-53 | 176 |
| MS.gene049240.t1 | AT2G18060 | 49.390 | 164 | 74 | 3 | 7 | 166 | 9 | 167 | 4.61e-53 | 177 |
| MS.gene049240.t1 | AT2G18060 | 49.390 | 164 | 74 | 3 | 7 | 166 | 9 | 167 | 4.61e-53 | 177 |
| MS.gene049240.t1 | AT4G36160 | 51.923 | 156 | 66 | 3 | 7 | 158 | 10 | 160 | 9.25e-53 | 177 |
| MS.gene049240.t1 | AT4G36160 | 51.923 | 156 | 66 | 3 | 7 | 158 | 10 | 160 | 9.25e-53 | 177 |
| MS.gene049240.t1 | AT5G62380 | 49.133 | 173 | 79 | 3 | 1 | 169 | 1 | 168 | 9.67e-53 | 176 |
| MS.gene049240.t1 | AT5G62380 | 49.133 | 173 | 79 | 3 | 1 | 169 | 1 | 168 | 9.67e-53 | 176 |
| MS.gene049240.t1 | AT4G36160 | 51.923 | 156 | 66 | 3 | 7 | 158 | 14 | 164 | 9.75e-53 | 177 |
| MS.gene049240.t1 | AT5G17260 | 52.866 | 157 | 67 | 4 | 5 | 157 | 4 | 157 | 1.25e-52 | 179 |
| MS.gene049240.t1 | AT1G26870 | 51.250 | 160 | 69 | 2 | 7 | 157 | 16 | 175 | 1.48e-52 | 177 |
| MS.gene049240.t1 | AT1G54330 | 53.704 | 162 | 66 | 3 | 5 | 163 | 4 | 159 | 2.55e-52 | 173 |
| MS.gene049240.t1 | AT1G79580 | 49.701 | 167 | 73 | 3 | 3 | 164 | 13 | 173 | 4.64e-52 | 175 |
| MS.gene049240.t1 | AT1G79580 | 49.701 | 167 | 73 | 3 | 3 | 164 | 13 | 173 | 4.64e-52 | 175 |
| MS.gene049240.t1 | AT1G79580 | 49.701 | 167 | 73 | 3 | 3 | 164 | 13 | 173 | 4.64e-52 | 175 |
| MS.gene049240.t1 | AT1G79580 | 49.701 | 167 | 73 | 3 | 3 | 164 | 13 | 173 | 4.64e-52 | 175 |
| MS.gene049240.t1 | AT1G79580 | 49.701 | 167 | 73 | 3 | 3 | 164 | 13 | 173 | 4.64e-52 | 175 |
| MS.gene049240.t1 | AT2G43000 | 51.333 | 150 | 70 | 2 | 9 | 157 | 20 | 167 | 6.73e-52 | 171 |
| MS.gene049240.t1 | AT4G17980 | 51.875 | 160 | 71 | 3 | 3 | 157 | 2 | 160 | 8.35e-52 | 171 |
| MS.gene049240.t1 | AT3G03200 | 52.866 | 157 | 67 | 4 | 5 | 157 | 4 | 157 | 9.31e-52 | 177 |
| MS.gene049240.t1 | AT4G17980 | 51.875 | 160 | 71 | 3 | 3 | 157 | 2 | 160 | 9.36e-52 | 172 |
| MS.gene049240.t1 | AT5G53950 | 54.375 | 160 | 57 | 3 | 7 | 157 | 17 | 169 | 1.15e-51 | 174 |
| MS.gene049240.t1 | AT4G10350 | 50.898 | 167 | 75 | 3 | 7 | 169 | 9 | 172 | 1.29e-51 | 173 |
| MS.gene049240.t1 | AT3G04060 | 50.595 | 168 | 80 | 2 | 2 | 167 | 15 | 181 | 1.87e-51 | 172 |
| MS.gene049240.t1 | AT5G46590 | 52.201 | 159 | 70 | 3 | 3 | 157 | 2 | 158 | 1.92e-51 | 171 |
| MS.gene049240.t1 | AT3G15170 | 50.000 | 166 | 79 | 2 | 1 | 163 | 14 | 178 | 3.81e-51 | 171 |
| MS.gene049240.t1 | AT1G62700 | 45.506 | 178 | 86 | 4 | 6 | 177 | 6 | 178 | 3.84e-51 | 173 |
| MS.gene049240.t1 | AT1G62700 | 45.506 | 178 | 86 | 4 | 6 | 177 | 6 | 178 | 3.84e-51 | 173 |
| MS.gene049240.t1 | AT3G29035 | 62.791 | 129 | 47 | 1 | 4 | 131 | 21 | 149 | 3.88e-51 | 171 |
| MS.gene049240.t1 | AT1G12260 | 48.718 | 156 | 71 | 3 | 7 | 158 | 7 | 157 | 5.36e-51 | 171 |
| MS.gene049240.t1 | AT1G32770 | 41.284 | 218 | 115 | 4 | 1 | 205 | 10 | 227 | 7.46e-51 | 171 |
| MS.gene049240.t1 | AT1G12260 | 48.718 | 156 | 71 | 3 | 7 | 158 | 7 | 157 | 9.49e-51 | 172 |
| MS.gene049240.t1 | AT5G66300 | 49.686 | 159 | 72 | 3 | 7 | 161 | 12 | 166 | 1.83e-50 | 168 |
| MS.gene049240.t1 | AT5G46590 | 54.167 | 144 | 62 | 2 | 3 | 142 | 2 | 145 | 2.37e-50 | 167 |
| MS.gene049240.t1 | AT5G18270 | 52.795 | 161 | 61 | 3 | 5 | 157 | 19 | 172 | 2.59e-50 | 169 |
| MS.gene049240.t1 | AT5G18270 | 52.795 | 161 | 61 | 3 | 5 | 157 | 19 | 172 | 3.42e-50 | 169 |
| MS.gene049240.t1 | AT1G65910 | 50.920 | 163 | 74 | 4 | 5 | 164 | 4 | 163 | 3.42e-50 | 175 |
| MS.gene049240.t1 | AT3G10490 | 51.948 | 154 | 69 | 3 | 7 | 157 | 27 | 178 | 6.46e-50 | 165 |
| MS.gene049240.t1 | AT1G33280 | 51.923 | 156 | 65 | 3 | 7 | 158 | 8 | 157 | 9.95e-50 | 167 |
| MS.gene049240.t1 | AT1G71930 | 49.032 | 155 | 70 | 3 | 7 | 157 | 9 | 158 | 1.02e-49 | 167 |
| MS.gene049240.t1 | AT1G71930 | 49.032 | 155 | 70 | 3 | 7 | 157 | 9 | 158 | 1.02e-49 | 167 |
| MS.gene049240.t1 | AT1G32510 | 37.102 | 283 | 160 | 7 | 7 | 278 | 6 | 281 | 6.37e-49 | 164 |
| MS.gene049240.t1 | AT5G13180 | 54.375 | 160 | 61 | 4 | 3 | 158 | 10 | 161 | 1.04e-48 | 162 |
| MS.gene049240.t1 | AT4G35580 | 38.148 | 270 | 127 | 8 | 7 | 247 | 9 | 267 | 1.05e-48 | 169 |
| MS.gene049240.t1 | AT4G35580 | 38.148 | 270 | 127 | 8 | 7 | 247 | 9 | 267 | 1.09e-48 | 169 |
| MS.gene049240.t1 | AT4G35580 | 40.650 | 246 | 118 | 7 | 7 | 235 | 9 | 243 | 1.12e-48 | 169 |
| MS.gene049240.t1 | AT3G10490 | 51.948 | 154 | 69 | 3 | 7 | 157 | 27 | 178 | 1.62e-48 | 167 |
| MS.gene049240.t1 | AT3G10480 | 50.649 | 154 | 70 | 3 | 7 | 157 | 27 | 177 | 1.96e-48 | 167 |
| MS.gene049240.t1 | AT3G10480 | 50.649 | 154 | 71 | 3 | 7 | 157 | 27 | 178 | 4.57e-48 | 166 |
| MS.gene049240.t1 | AT1G33060 | 42.735 | 234 | 107 | 9 | 7 | 226 | 24 | 244 | 1.18e-47 | 169 |
| MS.gene049240.t1 | AT1G33060 | 42.553 | 235 | 108 | 9 | 7 | 227 | 24 | 245 | 1.22e-47 | 169 |
| MS.gene049240.t1 | AT1G56010 | 50.000 | 156 | 76 | 2 | 4 | 157 | 16 | 171 | 3.87e-47 | 160 |
| MS.gene049240.t1 | AT5G24590 | 44.041 | 193 | 94 | 4 | 7 | 188 | 13 | 202 | 4.77e-47 | 164 |
| MS.gene049240.t1 | AT2G46770 | 37.008 | 254 | 128 | 8 | 1 | 225 | 10 | 260 | 1.52e-46 | 160 |
| MS.gene049240.t1 | AT3G49530 | 48.077 | 156 | 74 | 3 | 7 | 158 | 13 | 165 | 1.24e-45 | 159 |
| MS.gene049240.t1 | AT3G12977 | 49.359 | 156 | 74 | 4 | 4 | 157 | 15 | 167 | 1.66e-45 | 155 |
| MS.gene049240.t1 | AT3G49530 | 48.077 | 156 | 74 | 3 | 7 | 158 | 13 | 165 | 3.37e-45 | 159 |
| MS.gene049240.t1 | AT4G28530 | 47.674 | 172 | 62 | 4 | 6 | 157 | 9 | 172 | 3.54e-45 | 156 |
| MS.gene049240.t1 | AT3G61910 | 43.478 | 184 | 89 | 6 | 1 | 170 | 5 | 187 | 2.62e-44 | 154 |
| MS.gene049240.t1 | AT3G10500 | 49.359 | 156 | 73 | 3 | 7 | 159 | 9 | 161 | 3.44e-44 | 158 |
| MS.gene049240.t1 | AT3G12910 | 48.538 | 171 | 72 | 6 | 9 | 164 | 23 | 192 | 3.65e-44 | 152 |
| MS.gene049240.t1 | AT2G17040 | 47.205 | 161 | 72 | 3 | 1 | 157 | 1 | 152 | 3.83e-44 | 151 |
| MS.gene049240.t1 | AT3G10480 | 42.781 | 187 | 69 | 3 | 7 | 157 | 27 | 211 | 8.98e-44 | 156 |
| MS.gene049240.t1 | AT5G04410 | 48.718 | 156 | 74 | 3 | 7 | 159 | 9 | 161 | 2.01e-43 | 156 |
| MS.gene049240.t1 | AT5G09330 | 45.000 | 160 | 82 | 3 | 3 | 159 | 2 | 158 | 4.77e-42 | 151 |
| MS.gene049240.t1 | AT5G09330 | 45.000 | 160 | 82 | 3 | 3 | 159 | 2 | 158 | 4.77e-42 | 151 |
| MS.gene049240.t1 | AT5G09330 | 45.000 | 160 | 82 | 3 | 3 | 159 | 2 | 158 | 4.77e-42 | 151 |
| MS.gene049240.t1 | AT5G09330 | 45.000 | 160 | 82 | 3 | 3 | 159 | 2 | 158 | 4.77e-42 | 151 |
| MS.gene049240.t1 | AT5G09330 | 45.000 | 160 | 82 | 3 | 3 | 159 | 2 | 158 | 4.77e-42 | 151 |
| MS.gene049240.t1 | AT1G34180 | 46.104 | 154 | 77 | 4 | 9 | 159 | 18 | 168 | 5.24e-41 | 147 |
| MS.gene049240.t1 | AT2G27300 | 44.118 | 170 | 79 | 4 | 7 | 174 | 14 | 169 | 1.84e-40 | 144 |
| MS.gene049240.t1 | AT1G34180 | 46.104 | 154 | 77 | 4 | 9 | 159 | 18 | 168 | 2.82e-40 | 147 |
| MS.gene049240.t1 | AT1G34190 | 52.381 | 126 | 57 | 2 | 9 | 131 | 18 | 143 | 1.09e-39 | 145 |
| MS.gene049240.t1 | AT5G64060 | 43.750 | 160 | 84 | 4 | 3 | 159 | 2 | 158 | 1.25e-39 | 142 |
| MS.gene049240.t1 | AT1G34180 | 42.771 | 166 | 77 | 4 | 9 | 159 | 18 | 180 | 3.41e-39 | 143 |
| MS.gene049240.t1 | AT3G44290 | 44.595 | 148 | 70 | 3 | 9 | 154 | 16 | 153 | 1.32e-38 | 135 |
| MS.gene049240.t1 | AT1G34180 | 42.771 | 166 | 77 | 4 | 9 | 159 | 18 | 180 | 1.70e-38 | 142 |
| MS.gene049240.t1 | AT1G32870 | 50.000 | 158 | 69 | 5 | 7 | 159 | 10 | 162 | 6.66e-38 | 140 |
| MS.gene049240.t1 | AT3G44290 | 44.595 | 148 | 70 | 3 | 9 | 154 | 16 | 153 | 7.29e-38 | 137 |
| MS.gene049240.t1 | AT1G32870 | 50.000 | 158 | 69 | 5 | 7 | 159 | 10 | 162 | 8.14e-38 | 140 |
| MS.gene049240.t1 | AT5G22290 | 44.444 | 153 | 72 | 4 | 9 | 158 | 23 | 165 | 1.02e-37 | 136 |
| MS.gene049240.t1 | AT1G32870 | 50.000 | 158 | 69 | 5 | 7 | 159 | 46 | 198 | 1.10e-37 | 140 |
| MS.gene049240.t1 | AT5G04395 | 41.060 | 151 | 70 | 3 | 3 | 135 | 24 | 173 | 3.57e-33 | 120 |
| MS.gene049240.t1 | AT2G33480 | 56.436 | 101 | 40 | 2 | 59 | 158 | 7 | 104 | 1.28e-32 | 119 |
| MS.gene049240.t1 | AT5G61430 | 51.261 | 119 | 56 | 2 | 55 | 172 | 1 | 118 | 1.45e-32 | 121 |
| MS.gene049240.t1 | AT5G22380 | 39.286 | 168 | 93 | 4 | 6 | 165 | 4 | 170 | 3.09e-32 | 119 |
| MS.gene049240.t1 | AT3G44350 | 38.323 | 167 | 94 | 5 | 6 | 165 | 4 | 168 | 4.06e-32 | 119 |
| MS.gene049240.t1 | AT4G10350 | 49.573 | 117 | 55 | 2 | 54 | 169 | 12 | 125 | 2.10e-31 | 119 |
| MS.gene049240.t1 | AT1G56010 | 50.000 | 104 | 51 | 1 | 55 | 157 | 1 | 104 | 2.95e-29 | 112 |
| MS.gene049240.t1 | AT3G44350 | 40.909 | 132 | 71 | 3 | 6 | 130 | 4 | 135 | 4.87e-29 | 108 |
| MS.gene049240.t1 | AT5G64530 | 36.416 | 173 | 84 | 4 | 5 | 163 | 1 | 161 | 9.50e-29 | 108 |
| MS.gene049240.t1 | AT4G28530 | 38.462 | 169 | 45 | 3 | 6 | 157 | 9 | 135 | 1.39e-28 | 112 |
| MS.gene049240.t1 | AT3G12977 | 50.000 | 98 | 46 | 2 | 61 | 157 | 19 | 114 | 8.99e-28 | 107 |
| MS.gene049240.t1 | AT4G01520 | 32.231 | 242 | 141 | 10 | 8 | 235 | 5 | 237 | 9.59e-28 | 109 |
| MS.gene049240.t1 | AT4G01550 | 42.308 | 130 | 68 | 3 | 10 | 132 | 7 | 136 | 1.31e-27 | 111 |
| MS.gene049240.t1 | AT5G64530 | 42.424 | 132 | 61 | 3 | 5 | 133 | 1 | 120 | 1.40e-27 | 105 |
| MS.gene049240.t1 | AT4G01540 | 35.263 | 190 | 106 | 7 | 10 | 191 | 7 | 187 | 7.13e-26 | 106 |
| MS.gene049240.t1 | AT4G01540 | 35.263 | 190 | 106 | 7 | 10 | 191 | 7 | 187 | 8.01e-26 | 105 |
| MS.gene049240.t1 | AT4G01540 | 32.743 | 226 | 132 | 9 | 10 | 224 | 7 | 223 | 1.03e-25 | 105 |
| MS.gene049240.t1 | AT4G01540 | 32.743 | 226 | 132 | 9 | 10 | 224 | 7 | 223 | 1.43e-25 | 105 |
| MS.gene049240.t1 | AT3G04420 | 43.077 | 130 | 69 | 3 | 5 | 129 | 1 | 130 | 6.22e-25 | 101 |
| MS.gene049240.t1 | AT3G04420 | 43.077 | 130 | 69 | 3 | 5 | 129 | 1 | 130 | 1.66e-24 | 101 |
| MS.gene049240.t1 | AT2G43000 | 48.889 | 90 | 43 | 2 | 69 | 157 | 2 | 89 | 3.18e-23 | 94.7 |
| MS.gene049240.t1 | AT1G02230 | 39.259 | 135 | 71 | 4 | 8 | 134 | 4 | 135 | 4.44e-23 | 97.8 |
| MS.gene049240.t1 | AT1G02220 | 35.366 | 164 | 90 | 5 | 5 | 163 | 1 | 153 | 2.27e-21 | 93.2 |
| MS.gene049240.t1 | AT5G14000 | 34.899 | 149 | 92 | 3 | 1 | 146 | 9 | 155 | 1.31e-20 | 86.7 |
| MS.gene049240.t1 | AT5G14000 | 33.333 | 162 | 97 | 5 | 1 | 159 | 9 | 162 | 1.39e-20 | 87.8 |
| MS.gene049240.t1 | AT3G10490 | 51.899 | 79 | 35 | 2 | 80 | 157 | 2 | 78 | 2.37e-20 | 90.1 |
| MS.gene049240.t1 | AT3G10490 | 51.899 | 79 | 35 | 2 | 80 | 157 | 2 | 78 | 2.37e-20 | 90.1 |
| MS.gene049240.t1 | AT1G02250 | 40.769 | 130 | 66 | 4 | 8 | 129 | 4 | 130 | 2.86e-20 | 89.7 |
| MS.gene049240.t1 | AT3G56530 | 34.395 | 157 | 92 | 5 | 4 | 155 | 49 | 199 | 3.20e-18 | 83.6 |
| MS.gene049240.t1 | AT1G01010 | 36.957 | 138 | 72 | 5 | 5 | 129 | 1 | 136 | 8.96e-18 | 83.2 |
| MS.gene049240.t1 | AT2G18060 | 43.373 | 83 | 41 | 2 | 85 | 166 | 2 | 79 | 6.26e-16 | 76.6 |
| MS.gene049240.t1 | AT3G55210 | 32.335 | 167 | 85 | 7 | 7 | 155 | 11 | 167 | 1.00e-15 | 75.9 |
| MS.gene049240.t1 | AT5G50820 | 34.058 | 138 | 70 | 5 | 5 | 133 | 15 | 140 | 1.08e-14 | 71.6 |
| MS.gene049240.t1 | AT3G04430 | 34.351 | 131 | 71 | 5 | 13 | 129 | 6 | 135 | 6.34e-13 | 66.6 |
| MS.gene049240.t1 | AT3G56520 | 29.775 | 178 | 91 | 7 | 7 | 167 | 8 | 168 | 6.17e-12 | 63.5 |
| MS.gene049240.t1 | AT4G29230 | 31.169 | 154 | 76 | 6 | 7 | 133 | 48 | 198 | 4.70e-11 | 63.5 |
| MS.gene049240.t1 | AT4G29230 | 31.169 | 154 | 76 | 6 | 7 | 133 | 47 | 197 | 5.14e-11 | 63.5 |
| MS.gene049240.t1 | AT4G29230 | 31.169 | 154 | 76 | 6 | 7 | 133 | 48 | 198 | 5.43e-11 | 63.2 |
| MS.gene049240.t1 | AT5G22290 | 35.922 | 103 | 46 | 5 | 86 | 182 | 2 | 90 | 8.05e-11 | 61.6 |
Find 66 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAAGGAGTTAAAACTAAT+TGG | 0.189428 | 3.3:+80267723 | MS.gene049240:CDS |
| GAGCTGCTGGAAGTGGTTAT+TGG | 0.288932 | 3.3:+80267615 | MS.gene049240:CDS |
| GAACCAGCTTTCGCCGTTAC+AGG | 0.306449 | 3.3:+80268326 | MS.gene049240:CDS |
| CTAGAGTCCGTGTGCAGCTT+TGG | 0.329733 | 3.3:-80268120 | None:intergenic |
| AATACCATTCTTTCTCACTA+TGG | 0.343467 | 3.3:-80267544 | None:intergenic |
| CGATTTGGCCGCGAACCATT+AGG | 0.350658 | 3.3:-80267593 | None:intergenic |
| TTTGATCCATGGCAGCTTCC+AGG | 0.350717 | 3.3:+80267415 | MS.gene049240:CDS |
| GATATTGACAATGACCCCTT+TGG | 0.359679 | 3.3:+80268285 | MS.gene049240:CDS |
| CCACTTCCAGCAGCTCGATT+TGG | 0.370452 | 3.3:-80267608 | None:intergenic |
| GAAGCCGATGGGGATTAAAA+AGG | 0.375581 | 3.3:+80267673 | MS.gene049240:CDS |
| ATCGGCTTCAATTTCCCAAT+TGG | 0.383323 | 3.3:-80267659 | None:intergenic |
| TCACCCCACTGATGAAGAAT+TGG | 0.389683 | 3.3:+80267315 | MS.gene049240:CDS |
| ACGGCGAAAGCTGGTTCATT+TGG | 0.397197 | 3.3:-80268320 | None:intergenic |
| CTGGTTCATTTGGTACTGAT+TGG | 0.398001 | 3.3:-80268310 | None:intergenic |
| GAACCTAAGTGGAATGATCT+TGG | 0.399272 | 3.3:+80268201 | MS.gene049240:CDS |
| AAATCAACTTCTTTGACAAC+GGG | 0.403446 | 3.3:-80267385 | None:intergenic |
| CAATTTGCAGCTTGATGATT+GGG | 0.405128 | 3.3:+80267927 | MS.gene049240:intron |
| TTAGGATACTTTCTGTCCCT+TGG | 0.410126 | 3.3:-80267575 | None:intergenic |
| ACTGGAGCTGATAAACCAAT+TGG | 0.421581 | 3.3:+80267644 | MS.gene049240:CDS |
| CTGAAGTGTCCATGTACAAT+TGG | 0.422519 | 3.3:-80268089 | None:intergenic |
| ATATTGACAATGACCCCTTT+GGG | 0.425194 | 3.3:+80268286 | MS.gene049240:CDS |
| ACAATTTGCAGCTTGATGAT+TGG | 0.442736 | 3.3:+80267926 | MS.gene049240:intron |
| TGTAGAATTTACAACAAGAA+AGG | 0.459071 | 3.3:+80267955 | MS.gene049240:CDS |
| TCGCGGCCAAATCGAGCTGC+TGG | 0.461608 | 3.3:+80267602 | MS.gene049240:CDS |
| AACCTAAGTGGAATGATCTT+GGG | 0.472070 | 3.3:+80268202 | MS.gene049240:CDS |
| TGGTACTGATTGGTCCCAAA+GGG | 0.477409 | 3.3:-80268300 | None:intergenic |
| CAAATCAACTTCTTTGACAA+CGG | 0.479813 | 3.3:-80267386 | None:intergenic |
| TCTCTGTCGCACGTGACATC+CGG | 0.481694 | 3.3:-80268168 | None:intergenic |
| AGTGGTTATTGGAAAGCTAC+TGG | 0.486265 | 3.3:+80267626 | MS.gene049240:CDS |
| CCAAATCGAGCTGCTGGAAG+TGG | 0.489371 | 3.3:+80267608 | MS.gene049240:CDS |
| CACACGGACTCTAGCAGCTC+CGG | 0.496485 | 3.3:+80268129 | MS.gene049240:CDS |
| AGGGACAGAAAGTATCCTAA+TGG | 0.497448 | 3.3:+80267578 | MS.gene049240:CDS |
| CGGTGGACACGTGGTTTCAC+CGG | 0.498892 | 3.3:+80268149 | MS.gene049240:CDS |
| TTCACCAATTCTTCATCAGT+GGG | 0.514077 | 3.3:-80267319 | None:intergenic |
| TAAGTACCTGGAAGCTGCCA+TGG | 0.514238 | 3.3:-80267421 | None:intergenic |
| CTGGAGCTGATAAACCAATT+GGG | 0.521189 | 3.3:+80267645 | MS.gene049240:CDS |
| GCCAACGTTGATAGATCAGC+CGG | 0.527376 | 3.3:+80267767 | MS.gene049240:CDS |
| GTTACCATAGTGAGAAAGAA+TGG | 0.534616 | 3.3:+80267540 | MS.gene049240:CDS |
| CGGTGAAACCACGTGTCCAC+CGG | 0.537364 | 3.3:-80268148 | None:intergenic |
| TGTCCTGTAACGGCGAAAGC+TGG | 0.540291 | 3.3:-80268329 | None:intergenic |
| TACTTGTGTCGCAAATGTGC+TGG | 0.543753 | 3.3:+80267346 | MS.gene049240:CDS |
| AATTGGGAAATTGAAGCCGA+TGG | 0.549113 | 3.3:+80267661 | MS.gene049240:CDS |
| AGGTGCAGAGTGAACCTAAG+TGG | 0.554479 | 3.3:+80268190 | MS.gene049240:CDS |
| GAATGATCTTGGGATACAGC+TGG | 0.555420 | 3.3:+80268212 | MS.gene049240:CDS |
| GGGGAATTACCAATTGTACA+TGG | 0.561485 | 3.3:+80268080 | MS.gene049240:CDS |
| ATTGGGAAATTGAAGCCGAT+GGG | 0.565472 | 3.3:+80267662 | MS.gene049240:CDS |
| ATTCACCAATTCTTCATCAG+TGG | 0.576758 | 3.3:-80267320 | None:intergenic |
| GAAAGTATCCTAATGGTTCG+CGG | 0.583925 | 3.3:+80267585 | MS.gene049240:CDS |
| ATCCCAAGATCATTCCACTT+AGG | 0.585889 | 3.3:-80268204 | None:intergenic |
| TTGGTACTGATTGGTCCCAA+AGG | 0.586250 | 3.3:-80268301 | None:intergenic |
| ATTTGTATAAGTTTGATCCA+TGG | 0.588059 | 3.3:+80267404 | MS.gene049240:CDS |
| TACATGAACATGTCCTGTAA+CGG | 0.591002 | 3.3:-80268339 | None:intergenic |
| TAGCAGCTCCGGTGGACACG+TGG | 0.600073 | 3.3:+80268140 | MS.gene049240:CDS |
| ACACAAGAAACAAGAATGCA+AGG | 0.604942 | 3.3:+80267262 | None:intergenic |
| TCCGGCTGATCTATCAACGT+TGG | 0.609930 | 3.3:-80267768 | None:intergenic |
| AAGGCGTTAGTATTCTATGC+CGG | 0.611791 | 3.3:+80267692 | MS.gene049240:CDS |
| ACGGACTCTAGCAGCTCCGG+TGG | 0.613169 | 3.3:+80268132 | MS.gene049240:CDS |
| TTCAGTTCCAAAGCTGCACA+CGG | 0.613734 | 3.3:+80268113 | MS.gene049240:CDS |
| GTGGGGTGAAATCTGAAACC+AGG | 0.631314 | 3.3:-80267301 | None:intergenic |
| TTGGGAAATTGAAGCCGATG+GGG | 0.639522 | 3.3:+80267663 | MS.gene049240:CDS |
| CAACACTAGTAACACACCAA+AGG | 0.649514 | 3.3:+80267993 | MS.gene049240:CDS |
| GGTGAATTAGAATTACCACC+TGG | 0.666365 | 3.3:+80267283 | MS.gene049240:CDS |
| GGTACTGATTGGTCCCAAAG+GGG | 0.684157 | 3.3:-80268299 | None:intergenic |
| GGATGTCACGTGCGACAGAG+AGG | 0.706107 | 3.3:+80268170 | MS.gene049240:CDS |
| TCACCAATTCTTCATCAGTG+GGG | 0.710619 | 3.3:-80267318 | None:intergenic |
| GGGTGAAATCTGAAACCAGG+TGG | 0.741808 | 3.3:-80267298 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAATAAAATTTGACTA+AGG | - | chr3.3:80267463-80267482 | None:intergenic | 10.0% |
| !! | ATAAATTATTCATTTGCAAT+TGG | - | chr3.3:80267491-80267510 | None:intergenic | 15.0% |
| !! | TAAATTATTCATTTGCAATT+GGG | - | chr3.3:80267490-80267509 | None:intergenic | 15.0% |
| !! | TTATTTATGTTTACAGAAAT+GGG | + | chr3.3:80267518-80267537 | MS.gene049240:intron | 15.0% |
| !! | TTTATTTATGTTTACAGAAA+TGG | + | chr3.3:80267517-80267536 | MS.gene049240:intron | 15.0% |
| !!! | TAGTTTTTTCAGATTATTAT+TGG | + | chr3.3:80267838-80267857 | MS.gene049240:intron | 15.0% |
| !!! | TCATAATAATTTTGAACCTT+TGG | - | chr3.3:80268012-80268031 | None:intergenic | 20.0% |
| ! | AAGCCAGAAATTCAAAAATT+GGG | + | chr3.3:80268060-80268079 | MS.gene049240:CDS | 25.0% |
| ! | ATTTGTATAAGTTTGATCCA+TGG | + | chr3.3:80267404-80267423 | MS.gene049240:CDS | 25.0% |
| ! | GTTAATGCTTCATACAAAAA+TGG | + | chr3.3:80267879-80267898 | MS.gene049240:intron | 25.0% |
| ! | TGTAGAATTTACAACAAGAA+AGG | + | chr3.3:80267955-80267974 | MS.gene049240:CDS | 25.0% |
| !! | AAAATGGATTTATCTGATTG+TGG | + | chr3.3:80267895-80267914 | MS.gene049240:intron | 25.0% |
| !!! | AATTAGTTTTAACTCCTTTG+GGG | - | chr3.3:80267724-80267743 | None:intergenic | 25.0% |
| !!! | CAATTAGTTTTAACTCCTTT+GGG | - | chr3.3:80267725-80267744 | None:intergenic | 25.0% |
| AAATCAACTTCTTTGACAAC+GGG | - | chr3.3:80267388-80267407 | None:intergenic | 30.0% | |
| AATACCATTCTTTCTCACTA+TGG | - | chr3.3:80267547-80267566 | None:intergenic | 30.0% | |
| AGCCAGAAATTCAAAAATTG+GGG | + | chr3.3:80268061-80268080 | MS.gene049240:CDS | 30.0% | |
| ATTATTCATTTGCAATTGGG+AGG | - | chr3.3:80267487-80267506 | None:intergenic | 30.0% | |
| CAAATCAACTTCTTTGACAA+CGG | - | chr3.3:80267389-80267408 | None:intergenic | 30.0% | |
| CCAAAGGAGTTAAAACTAAT+TGG | + | chr3.3:80267723-80267742 | MS.gene049240:CDS | 30.0% | |
| GAAGCCAGAAATTCAAAAAT+TGG | + | chr3.3:80268059-80268078 | MS.gene049240:CDS | 30.0% | |
| ! | TGATTTTCAGCTCAATTACT+TGG | + | chr3.3:80268245-80268264 | MS.gene049240:CDS | 30.0% |
| ! | TTCCCCAATTTTTGAATTTC+TGG | - | chr3.3:80268066-80268085 | None:intergenic | 30.0% |
| !!! | AATGGTATTTTTTCTCTCCA+AGG | + | chr3.3:80267558-80267577 | MS.gene049240:CDS | 30.0% |
| !!! | ATGGTATTTTTTCTCTCCAA+GGG | + | chr3.3:80267559-80267578 | MS.gene049240:CDS | 30.0% |
| !!! | ATTAGTTTTAACTCCTTTGG+GGG | - | chr3.3:80267723-80267742 | None:intergenic | 30.0% |
| !!! | CCAATTAGTTTTAACTCCTT+TGG | - | chr3.3:80267726-80267745 | None:intergenic | 30.0% |
| AACCTAAGTGGAATGATCTT+GGG | + | chr3.3:80268202-80268221 | MS.gene049240:CDS | 35.0% | |
| ATATTGACAATGACCCCTTT+GGG | + | chr3.3:80268286-80268305 | MS.gene049240:CDS | 35.0% | |
| ATTCACCAATTCTTCATCAG+TGG | - | chr3.3:80267323-80267342 | None:intergenic | 35.0% | |
| CGGAAAGAAAAACAACTTGA+GGG | + | chr3.3:80267787-80267806 | MS.gene049240:CDS | 35.0% | |
| GTTACCATAGTGAGAAAGAA+TGG | + | chr3.3:80267540-80267559 | MS.gene049240:CDS | 35.0% | |
| TACATGAACATGTCCTGTAA+CGG | - | chr3.3:80268342-80268361 | None:intergenic | 35.0% | |
| TTCACCAATTCTTCATCAGT+GGG | - | chr3.3:80267322-80267341 | None:intergenic | 35.0% | |
| ! | AAACAACTTGAGGGTATGTT+TGG | + | chr3.3:80267796-80267815 | MS.gene049240:intron | 35.0% |
| ! | ACAATTTGCAGCTTGATGAT+TGG | + | chr3.3:80267926-80267945 | MS.gene049240:intron | 35.0% |
| ! | CAATTTGCAGCTTGATGATT+GGG | + | chr3.3:80267927-80267946 | MS.gene049240:intron | 35.0% |
| ! | TTCTAGCTAGATTAAGTACC+TGG | - | chr3.3:80267436-80267455 | None:intergenic | 35.0% |
| !!! | CCTCAAGTTGTTTTTCTTTC+CGG | - | chr3.3:80267789-80267808 | None:intergenic | 35.0% |
| AATTGGGAAATTGAAGCCGA+TGG | + | chr3.3:80267661-80267680 | MS.gene049240:CDS | 40.0% | |
| ACTGGAGCTGATAAACCAAT+TGG | + | chr3.3:80267644-80267663 | MS.gene049240:CDS | 40.0% | |
| AGTGGTTATTGGAAAGCTAC+TGG | + | chr3.3:80267626-80267645 | MS.gene049240:CDS | 40.0% | |
| ATCCCAAGATCATTCCACTT+AGG | - | chr3.3:80268207-80268226 | None:intergenic | 40.0% | |
| ATTGGGAAATTGAAGCCGAT+GGG | + | chr3.3:80267662-80267681 | MS.gene049240:CDS | 40.0% | |
| CAACACTAGTAACACACCAA+AGG | + | chr3.3:80267993-80268012 | MS.gene049240:CDS | 40.0% | |
| CCGGAAAGAAAAACAACTTG+AGG | + | chr3.3:80267786-80267805 | MS.gene049240:CDS | 40.0% | |
| CTGGAGCTGATAAACCAATT+GGG | + | chr3.3:80267645-80267664 | MS.gene049240:CDS | 40.0% | |
| GAACCTAAGTGGAATGATCT+TGG | + | chr3.3:80268201-80268220 | MS.gene049240:CDS | 40.0% | |
| GATATTGACAATGACCCCTT+TGG | + | chr3.3:80268285-80268304 | MS.gene049240:CDS | 40.0% | |
| GGGGAATTACCAATTGTACA+TGG | + | chr3.3:80268080-80268099 | MS.gene049240:CDS | 40.0% | |
| GGTGAATTAGAATTACCACC+TGG | + | chr3.3:80267283-80267302 | MS.gene049240:CDS | 40.0% | |
| TCACCAATTCTTCATCAGTG+GGG | - | chr3.3:80267321-80267340 | None:intergenic | 40.0% | |
| TTAGGATACTTTCTGTCCCT+TGG | - | chr3.3:80267578-80267597 | None:intergenic | 40.0% | |
| ! | AACGCCTTTTTAATCCCCAT+CGG | - | chr3.3:80267680-80267699 | None:intergenic | 40.0% |
| ! | AAGGCGTTAGTATTCTATGC+CGG | + | chr3.3:80267692-80267711 | MS.gene049240:CDS | 40.0% |
| ! | ATCGGCTTCAATTTCCCAAT+TGG | - | chr3.3:80267662-80267681 | None:intergenic | 40.0% |
| ! | CTGAAGTGTCCATGTACAAT+TGG | - | chr3.3:80268092-80268111 | None:intergenic | 40.0% |
| !! | AGGGACAGAAAGTATCCTAA+TGG | + | chr3.3:80267578-80267597 | MS.gene049240:CDS | 40.0% |
| !! | CTGGTTCATTTGGTACTGAT+TGG | - | chr3.3:80268313-80268332 | None:intergenic | 40.0% |
| !! | GAAAGTATCCTAATGGTTCG+CGG | + | chr3.3:80267585-80267604 | MS.gene049240:CDS | 40.0% |
| GAAGCCGATGGGGATTAAAA+AGG | + | chr3.3:80267673-80267692 | MS.gene049240:CDS | 45.0% | |
| GAATGATCTTGGGATACAGC+TGG | + | chr3.3:80268212-80268231 | MS.gene049240:CDS | 45.0% | |
| TACTTGTGTCGCAAATGTGC+TGG | + | chr3.3:80267346-80267365 | MS.gene049240:CDS | 45.0% | |
| TCACCCCACTGATGAAGAAT+TGG | + | chr3.3:80267315-80267334 | MS.gene049240:CDS | 45.0% | |
| TTCAGTTCCAAAGCTGCACA+CGG | + | chr3.3:80268113-80268132 | MS.gene049240:CDS | 45.0% | |
| TTGGGAAATTGAAGCCGATG+GGG | + | chr3.3:80267663-80267682 | MS.gene049240:CDS | 45.0% | |
| !! | TGGTACTGATTGGTCCCAAA+GGG | - | chr3.3:80268303-80268322 | None:intergenic | 45.0% |
| !! | TTGGTACTGATTGGTCCCAA+AGG | - | chr3.3:80268304-80268323 | None:intergenic | 45.0% |
| AGGTGCAGAGTGAACCTAAG+TGG | + | chr3.3:80268190-80268209 | MS.gene049240:CDS | 50.0% | |
| GAGCTGCTGGAAGTGGTTAT+TGG | + | chr3.3:80267615-80267634 | MS.gene049240:CDS | 50.0% | |
| TAAGTACCTGGAAGCTGCCA+TGG | - | chr3.3:80267424-80267443 | None:intergenic | 50.0% | |
| TCCGGCTGATCTATCAACGT+TGG | - | chr3.3:80267771-80267790 | None:intergenic | 50.0% | |
| TTTGATCCATGGCAGCTTCC+AGG | + | chr3.3:80267415-80267434 | MS.gene049240:CDS | 50.0% | |
| ! | AACTCCTTTGGGGGCTTTAC+CGG | - | chr3.3:80267714-80267733 | None:intergenic | 50.0% |
| ! | ACGGCGAAAGCTGGTTCATT+TGG | - | chr3.3:80268323-80268342 | None:intergenic | 50.0% |
| ! | GCCAACGTTGATAGATCAGC+CGG | + | chr3.3:80267767-80267786 | MS.gene049240:CDS | 50.0% |
| ! | GGGTGAAATCTGAAACCAGG+TGG | - | chr3.3:80267301-80267320 | None:intergenic | 50.0% |
| ! | GTGGGGTGAAATCTGAAACC+AGG | - | chr3.3:80267304-80267323 | None:intergenic | 50.0% |
| !! | GGTACTGATTGGTCCCAAAG+GGG | - | chr3.3:80268302-80268321 | None:intergenic | 50.0% |
| CCAAATCGAGCTGCTGGAAG+TGG | + | chr3.3:80267608-80267627 | MS.gene049240:CDS | 55.0% | |
| CCACTTCCAGCAGCTCGATT+TGG | - | chr3.3:80267611-80267630 | None:intergenic | 55.0% | |
| CTAGAGTCCGTGTGCAGCTT+TGG | - | chr3.3:80268123-80268142 | None:intergenic | 55.0% | |
| GAACCAGCTTTCGCCGTTAC+AGG | + | chr3.3:80268326-80268345 | MS.gene049240:CDS | 55.0% | |
| TATGCCGGTAAAGCCCCCAA+AGG | + | chr3.3:80267707-80267726 | MS.gene049240:CDS | 55.0% | |
| TCTCTGTCGCACGTGACATC+CGG | - | chr3.3:80268171-80268190 | None:intergenic | 55.0% | |
| TGTCCTGTAACGGCGAAAGC+TGG | - | chr3.3:80268332-80268351 | None:intergenic | 55.0% | |
| ! | CGATTTGGCCGCGAACCATT+AGG | - | chr3.3:80267596-80267615 | None:intergenic | 55.0% |
| CACACGGACTCTAGCAGCTC+CGG | + | chr3.3:80268129-80268148 | MS.gene049240:CDS | 60.0% | |
| CGGTGAAACCACGTGTCCAC+CGG | - | chr3.3:80268151-80268170 | None:intergenic | 60.0% | |
| CGGTGGACACGTGGTTTCAC+CGG | + | chr3.3:80268149-80268168 | MS.gene049240:CDS | 60.0% | |
| GGATGTCACGTGCGACAGAG+AGG | + | chr3.3:80268170-80268189 | MS.gene049240:CDS | 60.0% | |
| ACGGACTCTAGCAGCTCCGG+TGG | + | chr3.3:80268132-80268151 | MS.gene049240:CDS | 65.0% | |
| TAGCAGCTCCGGTGGACACG+TGG | + | chr3.3:80268140-80268159 | MS.gene049240:CDS | 65.0% | |
| TCGCGGCCAAATCGAGCTGC+TGG | + | chr3.3:80267602-80267621 | MS.gene049240:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 80267277 | 80268380 | 80267277 | ID=MS.gene049240 |
| chr3.3 | mRNA | 80267277 | 80268380 | 80267277 | ID=MS.gene049240.t1;Parent=MS.gene049240 |
| chr3.3 | exon | 80267277 | 80267436 | 80267277 | ID=MS.gene049240.t1.exon1;Parent=MS.gene049240.t1 |
| chr3.3 | CDS | 80267277 | 80267436 | 80267277 | ID=cds.MS.gene049240.t1;Parent=MS.gene049240.t1 |
| chr3.3 | exon | 80267534 | 80267808 | 80267534 | ID=MS.gene049240.t1.exon2;Parent=MS.gene049240.t1 |
| chr3.3 | CDS | 80267534 | 80267808 | 80267534 | ID=cds.MS.gene049240.t1;Parent=MS.gene049240.t1 |
| chr3.3 | exon | 80267937 | 80268380 | 80267937 | ID=MS.gene049240.t1.exon3;Parent=MS.gene049240.t1 |
| chr3.3 | CDS | 80267937 | 80268380 | 80267937 | ID=cds.MS.gene049240.t1;Parent=MS.gene049240.t1 |
| Gene Sequence |
| Protein sequence |
