Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050619.t1 | AEW66884.1 | 96.4 | 421 | 15 | 0 | 1 | 421 | 1 | 421 | 2.80E-165 | 591.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050619.t1 | Q99089 | 40.0 | 425 | 237 | 3 | 1 | 421 | 1 | 411 | 7.8e-68 | 259.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050619.t1 | G9JKY1 | 96.4 | 421 | 15 | 0 | 1 | 421 | 1 | 421 | 2.0e-165 | 591.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene050619.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050619 | MS.gene22824 | 0.997938 | 1.98E-252 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050619.t1 | MTR_7g116890 | 95.529 | 425 | 15 | 1 | 1 | 421 | 1 | 425 | 0.0 | 830 |
| MS.gene050619.t1 | MTR_8g028150 | 69.159 | 428 | 117 | 7 | 1 | 420 | 1 | 421 | 0.0 | 573 |
| MS.gene050619.t1 | MTR_5g028850 | 38.860 | 386 | 187 | 16 | 1 | 348 | 1 | 375 | 1.42e-61 | 204 |
| MS.gene050619.t1 | MTR_5g028850 | 37.958 | 382 | 194 | 15 | 1 | 348 | 1 | 373 | 9.35e-60 | 200 |
| MS.gene050619.t1 | MTR_8g070820 | 36.815 | 383 | 198 | 14 | 1 | 348 | 1 | 374 | 1.10e-57 | 194 |
| MS.gene050619.t1 | MTR_8g070820 | 36.927 | 371 | 188 | 13 | 1 | 348 | 1 | 348 | 3.44e-55 | 187 |
| MS.gene050619.t1 | MTR_8g077950 | 36.637 | 333 | 162 | 10 | 32 | 349 | 30 | 328 | 4.87e-44 | 157 |
| MS.gene050619.t1 | MTR_8g077950 | 36.858 | 331 | 162 | 10 | 32 | 349 | 30 | 326 | 1.19e-43 | 155 |
| MS.gene050619.t1 | MTR_8g077950 | 34.843 | 287 | 138 | 9 | 32 | 303 | 30 | 282 | 2.67e-27 | 110 |
| MS.gene050619.t1 | MTR_8g077950 | 45.455 | 121 | 59 | 3 | 236 | 349 | 148 | 268 | 1.03e-22 | 97.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050619.t1 | AT2G46270 | 53.935 | 432 | 138 | 14 | 1 | 421 | 1 | 382 | 1.46e-133 | 389 |
| MS.gene050619.t1 | AT2G46270 | 53.935 | 432 | 138 | 14 | 1 | 421 | 1 | 382 | 1.46e-133 | 389 |
| MS.gene050619.t1 | AT2G46270 | 51.756 | 427 | 132 | 13 | 1 | 421 | 1 | 359 | 1.87e-122 | 360 |
| MS.gene050619.t1 | AT2G46270 | 51.756 | 427 | 132 | 13 | 1 | 421 | 1 | 359 | 1.87e-122 | 360 |
| MS.gene050619.t1 | AT4G01120 | 44.731 | 427 | 161 | 14 | 1 | 420 | 1 | 359 | 9.65e-87 | 268 |
| MS.gene050619.t1 | AT2G35530 | 38.736 | 364 | 177 | 13 | 33 | 367 | 42 | 388 | 2.23e-53 | 183 |
| MS.gene050619.t1 | AT1G32150 | 38.381 | 383 | 186 | 16 | 1 | 351 | 1 | 365 | 4.70e-50 | 174 |
| MS.gene050619.t1 | AT4G36730 | 36.080 | 352 | 160 | 12 | 1 | 349 | 1 | 290 | 1.31e-45 | 160 |
| MS.gene050619.t1 | AT4G36730 | 35.511 | 352 | 160 | 12 | 1 | 349 | 1 | 288 | 1.64e-44 | 157 |
Find 124 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAGTATTTCCAGATGATT+TGG | 0.227999 | 7.3:+1267034 | None:intergenic |
| TGCAACTTCGCACCAGAATT+TGG | 0.240869 | 7.3:+1265177 | None:intergenic |
| GGAGGTGTCTCTATGCTTAA+AGG | 0.248730 | 7.3:+1267056 | None:intergenic |
| CTATATCTTCAGGCATATTA+TGG | 0.258289 | 7.3:-1267752 | MS.gene050619:intron |
| GATGGAAAATGTTGCATTAA+AGG | 0.262914 | 7.3:-1265447 | MS.gene050619:intron |
| ATCAGAAACTGAGATTTCTT+TGG | 0.279786 | 7.3:+1266134 | None:intergenic |
| ATCAAGAGTTAATAATAATT+CGG | 0.281960 | 7.3:-1265238 | MS.gene050619:CDS |
| AAAATTTAAAATTGCTCAAC+TGG | 0.296427 | 7.3:-1265334 | MS.gene050619:CDS |
| GGAAGTGACGGCAACACTTC+AGG | 0.299939 | 7.3:-1266742 | MS.gene050619:CDS |
| TGTGACAACAAACCAAATTC+TGG | 0.315200 | 7.3:-1265189 | MS.gene050619:CDS |
| TTGGTCAAAATTATCTCTTT+TGG | 0.325531 | 7.3:+1265306 | None:intergenic |
| TACTTACAGGTGCGGTCCTC+TGG | 0.332601 | 7.3:+1265274 | None:intergenic |
| CAGCATATGATGCCACCTTA+TGG | 0.338444 | 7.3:-1267553 | MS.gene050619:CDS |
| CAGTCTTGGTAGATTTCTCT+TGG | 0.342025 | 7.3:+1268234 | None:intergenic |
| GTAGAGCTCACCACTGTTAC+AGG | 0.347150 | 7.3:+1268197 | None:intergenic |
| AAGAAATTGAAAGGGTTTGA+TGG | 0.347852 | 7.3:-1266999 | MS.gene050619:CDS |
| TACAACTCACCTGTGGCTTC+TGG | 0.358055 | 7.3:-1267704 | MS.gene050619:CDS |
| TCAAGAGTTAATAATAATTC+GGG | 0.358553 | 7.3:-1265237 | MS.gene050619:CDS |
| TCAGGCTGAGGCCGAAGAAC+TGG | 0.370336 | 7.3:-1265555 | MS.gene050619:intron |
| ACCTGCATGGCTGCCCAATC+AGG | 0.376559 | 7.3:+1268059 | None:intergenic |
| GGCAATGCAGCAGAAGGTTG+TGG | 0.378841 | 7.3:+1265979 | None:intergenic |
| GATGGACTTGCAATGTCAAT+AGG | 0.380086 | 7.3:-1266981 | MS.gene050619:CDS |
| GTTGCCCCTGCTGGTGTCAC+AGG | 0.389453 | 7.3:-1266099 | MS.gene050619:CDS |
| GATTGCCTGCTTTCAGCTCC+AGG | 0.391527 | 7.3:+1266933 | None:intergenic |
| GGAACTGTGGAGGATGAAAA+TGG | 0.395483 | 7.3:-1265216 | MS.gene050619:CDS |
| TCATACCTGCTTCCTTAGTC+TGG | 0.402601 | 7.3:+1265730 | None:intergenic |
| AGAGCTGATGCTGTGGCTGC+TGG | 0.414627 | 7.3:-1265132 | MS.gene050619:CDS |
| TCCTGATTGGGCAGCCATGC+AGG | 0.414803 | 7.3:-1268060 | MS.gene050619:intron |
| CATGCTGAGAGTGCTGAGCC+TGG | 0.423095 | 7.3:-1266951 | MS.gene050619:CDS |
| TGATGCACTCTCAGCATTCA+AGG | 0.423689 | 7.3:+1265517 | None:intergenic |
| TGCGAAGTTGCACCAACTAT+TGG | 0.423928 | 7.3:-1265166 | MS.gene050619:CDS |
| ATCATCTGGAAATACTGATC+AGG | 0.424963 | 7.3:-1267030 | MS.gene050619:CDS |
| TCAGTATTTCCAGATGATTT+GGG | 0.427807 | 7.3:+1267035 | None:intergenic |
| CTGCATTGCCTCCCGAGGCT+TGG | 0.430381 | 7.3:-1265966 | MS.gene050619:CDS |
| ATGTTCATGTCTATCCTGAT+TGG | 0.430637 | 7.3:-1268073 | MS.gene050619:CDS |
| GCCTCCCGAGGCTTGGATAC+AGG | 0.438943 | 7.3:-1265959 | MS.gene050619:intron |
| GAGACACCTCCCAAATCATC+TGG | 0.441148 | 7.3:-1267044 | MS.gene050619:CDS |
| AATTGACCTGTGACACCAGC+AGG | 0.458083 | 7.3:+1266093 | None:intergenic |
| GAAGGTTGTGGGGCACTTGT+GGG | 0.461347 | 7.3:+1265991 | None:intergenic |
| CTGAGCCTGGAGCTGAAAGC+AGG | 0.472797 | 7.3:-1266938 | MS.gene050619:CDS |
| AGAAGGTTGTGGGGCACTTG+TGG | 0.474517 | 7.3:+1265990 | None:intergenic |
| GAAGTGACGGCAACACTTCA+GGG | 0.493985 | 7.3:-1266741 | MS.gene050619:CDS |
| GCAATGCAGCAGAAGGTTGT+GGG | 0.494500 | 7.3:+1265980 | None:intergenic |
| TGTTCATGTCTATCCTGATT+GGG | 0.502463 | 7.3:-1268072 | MS.gene050619:CDS |
| GAAATCTGAAAGACTGAGGA+TGG | 0.502476 | 7.3:-1265465 | MS.gene050619:CDS |
| GTCTGATGAAGAAATTGAAA+GGG | 0.504608 | 7.3:-1267007 | MS.gene050619:CDS |
| TTCTGCTGCATTGCCTCCCG+AGG | 0.504802 | 7.3:-1265971 | MS.gene050619:CDS |
| CACTCCTCACCCATATATGT+GGG | 0.507261 | 7.3:-1267678 | MS.gene050619:CDS |
| CTCAGTTTCTGATAAGATGA+TGG | 0.512164 | 7.3:-1266124 | MS.gene050619:CDS |
| TTCAGCGATGACCACCGCGC+TGG | 0.513035 | 7.3:-1266052 | MS.gene050619:CDS |
| GCCACAGGTGAGTTGTAGTA+AGG | 0.513412 | 7.3:+1267710 | None:intergenic |
| CTGCTAGGAGGTCCAGACTA+AGG | 0.514918 | 7.3:-1265742 | MS.gene050619:CDS |
| AGGCTTACAATAGGAACTGC+AGG | 0.515593 | 7.3:+1267484 | None:intergenic |
| GGTCCTCTGGCTGTCAATGT+TGG | 0.516004 | 7.3:+1265287 | None:intergenic |
| GCAGCCACAGCATCAGCTCT+AGG | 0.517070 | 7.3:+1265135 | None:intergenic |
| TAAGGTGGCATGGCAACTCT+TGG | 0.518466 | 7.3:+1267728 | None:intergenic |
| TGTGGATACATTGCTGCATA+AGG | 0.519877 | 7.3:+1267526 | None:intergenic |
| ACTGTTTAAGCAGATGGAGA+AGG | 0.523724 | 7.3:-1266186 | MS.gene050619:intron |
| ACACTCCTCACCCATATATG+TGG | 0.527863 | 7.3:-1267679 | MS.gene050619:CDS |
| GGTCTGATGAAGAAATTGAA+AGG | 0.533436 | 7.3:-1267008 | MS.gene050619:CDS |
| TAGGACTTGCATCCAATAGT+TGG | 0.533692 | 7.3:+1265154 | None:intergenic |
| GGTGTCACAGGTCAATTAGT+TGG | 0.533761 | 7.3:-1266087 | MS.gene050619:CDS |
| GACATGAACATTCGTCTGGT+TGG | 0.536497 | 7.3:+1268085 | None:intergenic |
| ATGATGGCAGTTGCCCCTGC+TGG | 0.540223 | 7.3:-1266108 | MS.gene050619:CDS |
| GATAGACATGAACATTCGTC+TGG | 0.541034 | 7.3:+1268081 | None:intergenic |
| CCGTACCTGTATCCAAGCCT+CGG | 0.543429 | 7.3:+1265954 | None:intergenic |
| GCTGCATAAGGATGTCCATA+AGG | 0.543750 | 7.3:+1267538 | None:intergenic |
| CAGCAATGTATCCACATGGA+GGG | 0.550797 | 7.3:-1267519 | MS.gene050619:CDS |
| TCATCTGGAAATACTGATCA+GGG | 0.551108 | 7.3:-1267029 | MS.gene050619:CDS |
| TATGTTATTATTACCTGTGG+TGG | 0.555801 | 7.3:+1267653 | None:intergenic |
| GAGGTCCAGACTAAGGAAGC+AGG | 0.557260 | 7.3:-1265735 | MS.gene050619:intron |
| AGAAGGAAAAGAAGCCGTGA+GGG | 0.558999 | 7.3:-1266571 | MS.gene050619:CDS |
| CAGTGGTCGGTGTTCCCTCA+CGG | 0.564990 | 7.3:+1266557 | None:intergenic |
| ACCACTGTTACAGGTGAAGA+AGG | 0.565721 | 7.3:+1268206 | None:intergenic |
| CAGGCTCAGCACTCTCAGCA+TGG | 0.566951 | 7.3:+1266952 | None:intergenic |
| TCGGGAGGCAATGCAGCAGA+AGG | 0.568716 | 7.3:+1265973 | None:intergenic |
| GATGAAATTCCTTGACTATG+TGG | 0.568887 | 7.3:+1267185 | None:intergenic |
| GCCTTCTTCACCTGTAACAG+TGG | 0.573364 | 7.3:-1268207 | MS.gene050619:intron |
| AATACTGAGGGTTCGAGTGA+TGG | 0.573693 | 7.3:-1266763 | MS.gene050619:CDS |
| CTGTTTAAGCAGATGGAGAA+GGG | 0.581574 | 7.3:-1266185 | MS.gene050619:intron |
| AGCGTGAACTGAAGCGTGAG+AGG | 0.582159 | 7.3:-1265787 | MS.gene050619:CDS |
| CGTACCTGTATCCAAGCCTC+GGG | 0.583108 | 7.3:+1265955 | None:intergenic |
| ATCAGGCTAATCAAACAAGA+AGG | 0.583524 | 7.3:-1266588 | MS.gene050619:intron |
| CGTGAGGGAACACCGACCAC+TGG | 0.590853 | 7.3:-1266556 | MS.gene050619:intron |
| AATCAAATCGAGAATCTGCT+AGG | 0.590860 | 7.3:-1265757 | MS.gene050619:CDS |
| ATTCCTTGACTATGTGGATG+TGG | 0.594309 | 7.3:+1267191 | None:intergenic |
| AAATTTAAAATTGCTCAACT+GGG | 0.603679 | 7.3:-1265333 | MS.gene050619:CDS |
| TGACCAACATTGACAGCCAG+AGG | 0.603992 | 7.3:-1265290 | MS.gene050619:CDS |
| TAATAATTCGGGAACTGTGG+AGG | 0.607798 | 7.3:-1265226 | MS.gene050619:CDS |
| GGTTCGAGTGATGGAAGTGA+CGG | 0.608791 | 7.3:-1266754 | MS.gene050619:CDS |
| TAATAATAATTCGGGAACTG+TGG | 0.615906 | 7.3:-1265229 | MS.gene050619:CDS |
| CTTGCAATGTCAATAGGCAA+TGG | 0.616162 | 7.3:-1266975 | MS.gene050619:CDS |
| TGAGTTGTAGTAAGGTGGCA+TGG | 0.618268 | 7.3:+1267718 | None:intergenic |
| GTGAACTGAAGCGTGAGAGG+AGG | 0.619223 | 7.3:-1265784 | MS.gene050619:CDS |
| GTCATCGCTGAAGAAACTGC+AGG | 0.623544 | 7.3:+1266063 | None:intergenic |
| ACCTGTATCCAAGCCTCGGG+AGG | 0.627725 | 7.3:+1265958 | None:intergenic |
| ACAGGTGAGTTGTAGTAAGG+TGG | 0.636010 | 7.3:+1267713 | None:intergenic |
| CAATGCAGCAGAAGGTTGTG+GGG | 0.639810 | 7.3:+1265981 | None:intergenic |
| GTATTTCCAGATGATTTGGG+AGG | 0.642501 | 7.3:+1267038 | None:intergenic |
| AGCAATGTATCCACATGGAG+GGG | 0.644007 | 7.3:-1267518 | MS.gene050619:CDS |
| AACAGAGTCATACCAGTGGT+CGG | 0.649459 | 7.3:+1266544 | None:intergenic |
| CAAATCGAGAATCTGCTAGG+AGG | 0.653155 | 7.3:-1265754 | MS.gene050619:CDS |
| CTGAGAAATCTGAAAGACTG+AGG | 0.654049 | 7.3:-1265469 | MS.gene050619:CDS |
| GGCTTACAATAGGAACTGCA+GGG | 0.654085 | 7.3:+1267485 | None:intergenic |
| GGTCCACATCCACATAGTCA+AGG | 0.654527 | 7.3:-1267194 | MS.gene050619:CDS |
| ACTCCTCACCCATATATGTG+GGG | 0.654672 | 7.3:-1267677 | MS.gene050619:CDS |
| GGAGTGTGACCAGAAGCCAC+AGG | 0.657093 | 7.3:+1267695 | None:intergenic |
| ATTGACCTGTGACACCAGCA+GGG | 0.658341 | 7.3:+1266094 | None:intergenic |
| GCATAAGGATGTCCATAAGG+TGG | 0.658959 | 7.3:+1267541 | None:intergenic |
| CTCCTCACCCATATATGTGG+GGG | 0.659411 | 7.3:-1267676 | MS.gene050619:CDS |
| AAGTCCTAGAGCTGATGCTG+TGG | 0.662680 | 7.3:-1265139 | MS.gene050619:CDS |
| ATTTCTCAGCTCCAGCGCGG+TGG | 0.663610 | 7.3:+1266041 | None:intergenic |
| GCAGCAATGTATCCACATGG+AGG | 0.664985 | 7.3:-1267520 | MS.gene050619:CDS |
| ATGAACAGTGTGAATACTGA+GGG | 0.671969 | 7.3:-1266775 | MS.gene050619:intron |
| AAGAAGGAAAAGAAGCCGTG+AGG | 0.679307 | 7.3:-1266572 | MS.gene050619:CDS |
| GAAGGGAAAACTCATACACA+AGG | 0.687878 | 7.3:-1266168 | MS.gene050619:CDS |
| TATGCAGCAATGTATCCACA+TGG | 0.688073 | 7.3:-1267523 | MS.gene050619:CDS |
| TGAGTATAAACCCCTCCATG+TGG | 0.689024 | 7.3:+1267508 | None:intergenic |
| TTGACCTGTGACACCAGCAG+GGG | 0.690300 | 7.3:+1266095 | None:intergenic |
| ACCTTACTACAACTCACCTG+TGG | 0.691801 | 7.3:-1267711 | MS.gene050619:CDS |
| AAGTGACGGCAACACTTCAG+GGG | 0.693337 | 7.3:-1266740 | MS.gene050619:intron |
| CTGAAAGCAGGCAATCACAG+AGG | 0.731086 | 7.3:-1266926 | MS.gene050619:intron |
| AGAATTTCTCAGCTCCAGCG+CGG | 0.750273 | 7.3:+1266038 | None:intergenic |
| TATGAACAGTGTGAATACTG+AGG | 0.751869 | 7.3:-1266776 | MS.gene050619:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAAACTAAAAAATCAA+AGG | + | chr7.3:1265927-1265946 | None:intergenic | 10.0% |
| !!! | ATAAATTTTACAAACATAAA+TGG | - | chr7.3:1265564-1265583 | MS.gene050619:intron | 10.0% |
| !!! | ATTATTTTAATACCATATTT+TGG | + | chr7.3:1267145-1267164 | None:intergenic | 10.0% |
| !!! | TTATTTTAATACCATATTTT+GGG | + | chr7.3:1267144-1267163 | None:intergenic | 10.0% |
| !! | ATCAAGAGTTAATAATAATT+CGG | - | chr7.3:1268138-1268157 | MS.gene050619:intron | 15.0% |
| !! | TTCAATTTGATATTAATTAG+AGG | + | chr7.3:1265395-1265414 | None:intergenic | 15.0% |
| !!! | AATTCTGTTTTGTAAAATAT+AGG | - | chr7.3:1266160-1266179 | MS.gene050619:CDS | 15.0% |
| !!! | ATTCTGTTTTGTAAAATATA+GGG | - | chr7.3:1266161-1266180 | MS.gene050619:CDS | 15.0% |
| !!! | ATTTTAAACAAATAGACTAT+AGG | + | chr7.3:1266720-1266739 | None:intergenic | 15.0% |
| !!! | GATTTTAAAATAATTCCTTT+TGG | - | chr7.3:1267545-1267564 | MS.gene050619:CDS | 15.0% |
| !! | TCAAGAGTTAATAATAATTC+GGG | - | chr7.3:1268139-1268158 | MS.gene050619:intron | 20.0% |
| !!! | AAAATTTAAAATTGCTCAAC+TGG | - | chr7.3:1268042-1268061 | MS.gene050619:intron | 20.0% |
| !!! | AAATTTAAAATTGCTCAACT+GGG | - | chr7.3:1268043-1268062 | MS.gene050619:intron | 20.0% |
| !!! | AATTTTTATCCACTTGAAAA+TGG | - | chr7.3:1265533-1265552 | MS.gene050619:CDS | 20.0% |
| !!! | ATTAAAATAATCAGTGTTGA+TGG | - | chr7.3:1267154-1267173 | MS.gene050619:intron | 20.0% |
| !!! | ATTACGAATGCTTTATTTTT+CGG | - | chr7.3:1266116-1266135 | MS.gene050619:CDS | 20.0% |
| !!! | ATTTATTTTAGAATGAACAC+TGG | + | chr7.3:1267365-1267384 | None:intergenic | 20.0% |
| !!! | TTATGTACTCATCTTTTAAT+AGG | - | chr7.3:1265262-1265281 | MS.gene050619:CDS | 20.0% |
| ! | AAAATCAAAGGTAAGAATGT+AGG | + | chr7.3:1265915-1265934 | None:intergenic | 25.0% |
| ! | AAATTGATCAATACTGACAA+AGG | - | chr7.3:1266011-1266030 | MS.gene050619:CDS | 25.0% |
| ! | AATATCATGTACCCAAAATA+TGG | - | chr7.3:1267130-1267149 | MS.gene050619:intron | 25.0% |
| ! | AGAAAATTATAACTTACAGC+AGG | + | chr7.3:1266221-1266240 | None:intergenic | 25.0% |
| ! | AGAACAGTTTAAATACTCTA+TGG | - | chr7.3:1267461-1267480 | MS.gene050619:intron | 25.0% |
| ! | ATAAAGATTATACTCAGCAT+AGG | - | chr7.3:1267769-1267788 | MS.gene050619:intron | 25.0% |
| ! | ATAAGACTCCAATATCAATA+CGG | + | chr7.3:1267093-1267112 | None:intergenic | 25.0% |
| ! | ATTGCAAGTATAATGCATTA+AGG | + | chr7.3:1266080-1266099 | None:intergenic | 25.0% |
| ! | CATATCATCATAAAGTTACT+TGG | + | chr7.3:1266584-1266603 | None:intergenic | 25.0% |
| ! | TAAACAACTCAAAAGGAAAA+AGG | + | chr7.3:1265349-1265368 | None:intergenic | 25.0% |
| ! | TATCCACAATAACAAACAAA+TGG | + | chr7.3:1266560-1266579 | None:intergenic | 25.0% |
| ! | TGAAACTTATGTTAATTGTC+TGG | - | chr7.3:1265962-1265981 | MS.gene050619:CDS | 25.0% |
| !! | AATAAGTTTTCTGTACTTAC+AGG | + | chr7.3:1268118-1268137 | None:intergenic | 25.0% |
| !! | ATAATTCCTTTTGGTATGTT+TGG | - | chr7.3:1267554-1267573 | MS.gene050619:intron | 25.0% |
| !! | CATCATTATCAGTTTTCTAA+TGG | + | chr7.3:1265590-1265609 | None:intergenic | 25.0% |
| !! | TTGGTCAAAATTATCTCTTT+TGG | + | chr7.3:1268073-1268092 | None:intergenic | 25.0% |
| !!! | ACTTCATTTTTTTTCGATTC+AGG | - | chr7.3:1268018-1268037 | MS.gene050619:intron | 25.0% |
| !!! | ATATAAATGTTGGTTTCTTC+TGG | - | chr7.3:1267668-1267687 | MS.gene050619:CDS | 25.0% |
| AAACAGAATTCATAAGATCG+TGG | + | chr7.3:1266150-1266169 | None:intergenic | 30.0% | |
| AAATTGTCTGCTATATCTTC+AGG | - | chr7.3:1265614-1265633 | MS.gene050619:intron | 30.0% | |
| AACAGAATTCATAAGATCGT+GGG | + | chr7.3:1266149-1266168 | None:intergenic | 30.0% | |
| AAGAAATTGAAAGGGTTTGA+TGG | - | chr7.3:1266377-1266396 | MS.gene050619:intron | 30.0% | |
| AAGCAAAATATTACCCAACT+AGG | + | chr7.3:1265456-1265475 | None:intergenic | 30.0% | |
| AAGTTATGATCAGTTGGAAT+TGG | - | chr7.3:1266276-1266295 | MS.gene050619:intron | 30.0% | |
| ACAAATCCAAACATACCAAA+AGG | + | chr7.3:1267563-1267582 | None:intergenic | 30.0% | |
| ACCACAGGTAATAATAACAT+AGG | - | chr7.3:1265725-1265744 | MS.gene050619:intron | 30.0% | |
| AGCAGGTATGATATAAATGT+TGG | - | chr7.3:1267658-1267677 | MS.gene050619:intron | 30.0% | |
| ATATCAATACGGTATGAAGT+CGG | + | chr7.3:1267082-1267101 | None:intergenic | 30.0% | |
| ATATCATTGTTGCTCAGTAA+GGG | - | chr7.3:1266976-1266995 | MS.gene050619:CDS | 30.0% | |
| ATCAGAAACTGAGATTTCTT+TGG | + | chr7.3:1267245-1267264 | None:intergenic | 30.0% | |
| ATCAGTATTTCCAGATGATT+TGG | + | chr7.3:1266345-1266364 | None:intergenic | 30.0% | |
| ATGAACAATAGAGTTGTCAT+GGG | - | chr7.3:1266877-1266896 | MS.gene050619:intron | 30.0% | |
| CAACTGAGAGAAAGATAAAT+AGG | + | chr7.3:1266526-1266545 | None:intergenic | 30.0% | |
| CTATATCTTCAGGCATATTA+TGG | - | chr7.3:1265624-1265643 | MS.gene050619:intron | 30.0% | |
| CTCAGAATCGTATATTAATC+AGG | - | chr7.3:1267724-1267743 | MS.gene050619:CDS | 30.0% | |
| GATGGAAAATGTTGCATTAA+AGG | - | chr7.3:1267929-1267948 | MS.gene050619:intron | 30.0% | |
| GTAAAATATGAACCAAACCA+TGG | + | chr7.3:1265989-1266008 | None:intergenic | 30.0% | |
| GTCTGATGAAGAAATTGAAA+GGG | - | chr7.3:1266369-1266388 | MS.gene050619:intron | 30.0% | |
| GTTAAATGAGAAAACAACCA+GGG | + | chr7.3:1265481-1265500 | None:intergenic | 30.0% | |
| TAAGAATGTAGGCTTACAAT+AGG | + | chr7.3:1265904-1265923 | None:intergenic | 30.0% | |
| TAATAATAATTCGGGAACTG+TGG | - | chr7.3:1268147-1268166 | MS.gene050619:intron | 30.0% | |
| TATATCATTGTTGCTCAGTA+AGG | - | chr7.3:1266975-1266994 | MS.gene050619:CDS | 30.0% | |
| TATGTTATTATTACCTGTGG+TGG | + | chr7.3:1265726-1265745 | None:intergenic | 30.0% | |
| TCAGTATTTCCAGATGATTT+GGG | + | chr7.3:1266344-1266363 | None:intergenic | 30.0% | |
| TGTTAAATGAGAAAACAACC+AGG | + | chr7.3:1265482-1265501 | None:intergenic | 30.0% | |
| TTGCTTATTCATGTCATCTA+GGG | + | chr7.3:1265787-1265806 | None:intergenic | 30.0% | |
| ! | ACTTCATACCGTATTGATAT+TGG | - | chr7.3:1267082-1267101 | MS.gene050619:intron | 30.0% |
| !! | TAAAGTGAACCATTTTCAAG+TGG | + | chr7.3:1265545-1265564 | None:intergenic | 30.0% |
| !! | TTTCTCTCAGTTGATAAGAT+TGG | - | chr7.3:1266533-1266552 | MS.gene050619:intron | 30.0% |
| AAAAAGGTAAGTAACCTGCA+TGG | + | chr7.3:1265333-1265352 | None:intergenic | 35.0% | |
| AAGGTAATCATAGTGTGGAA+AGG | + | chr7.3:1266061-1266080 | None:intergenic | 35.0% | |
| AATCAAATCGAGAATCTGCT+AGG | - | chr7.3:1267619-1267638 | MS.gene050619:intron | 35.0% | |
| ACAGAATTCATAAGATCGTG+GGG | + | chr7.3:1266148-1266167 | None:intergenic | 35.0% | |
| ATAGGATGTATGTATGCTCT+TGG | + | chr7.3:1266508-1266527 | None:intergenic | 35.0% | |
| ATAGGTGAAACAGTTGCATA+TGG | + | chr7.3:1266702-1266721 | None:intergenic | 35.0% | |
| ATCAGGCTAATCAAACAAGA+AGG | - | chr7.3:1266788-1266807 | MS.gene050619:intron | 35.0% | |
| ATCATCTGGAAATACTGATC+AGG | - | chr7.3:1266346-1266365 | MS.gene050619:intron | 35.0% | |
| ATGAACAGTGTGAATACTGA+GGG | - | chr7.3:1266601-1266620 | MS.gene050619:intron | 35.0% | |
| ATGTTCATGTCTATCCTGAT+TGG | - | chr7.3:1265303-1265322 | MS.gene050619:CDS | 35.0% | |
| CCAGAGATAAACAACTCAAA+AGG | + | chr7.3:1265356-1265375 | None:intergenic | 35.0% | |
| CTCAGTTTCTGATAAGATGA+TGG | - | chr7.3:1267252-1267271 | MS.gene050619:intron | 35.0% | |
| CTTTATCAAGTGTGTGACAT+GGG | + | chr7.3:1267755-1267774 | None:intergenic | 35.0% | |
| GATGAAATTCCTTGACTATG+TGG | + | chr7.3:1266194-1266213 | None:intergenic | 35.0% | |
| GATGAACAATAGAGTTGTCA+TGG | - | chr7.3:1266876-1266895 | MS.gene050619:intron | 35.0% | |
| GCATTAAGGTAATCATAGTG+TGG | + | chr7.3:1266066-1266085 | None:intergenic | 35.0% | |
| GCCTATGTTATTATTACCTG+TGG | + | chr7.3:1265729-1265748 | None:intergenic | 35.0% | |
| GCTATCAAGTTATGATCAGT+TGG | - | chr7.3:1266270-1266289 | MS.gene050619:intron | 35.0% | |
| GGTCTGATGAAGAAATTGAA+AGG | - | chr7.3:1266368-1266387 | MS.gene050619:intron | 35.0% | |
| GTCAACCAGTTTATTGAGTA+GGG | - | chr7.3:1266931-1266950 | MS.gene050619:CDS | 35.0% | |
| GTTGCTTATTCATGTCATCT+AGG | + | chr7.3:1265788-1265807 | None:intergenic | 35.0% | |
| TATCATTGTTGCTCAGTAAG+GGG | - | chr7.3:1266977-1266996 | MS.gene050619:CDS | 35.0% | |
| TATGAACAGTGTGAATACTG+AGG | - | chr7.3:1266600-1266619 | MS.gene050619:intron | 35.0% | |
| TATGTTAATTGTCTGGACCA+TGG | - | chr7.3:1265969-1265988 | MS.gene050619:CDS | 35.0% | |
| TCATCTGGAAATACTGATCA+GGG | - | chr7.3:1266347-1266366 | MS.gene050619:intron | 35.0% | |
| TCTTTATCAAGTGTGTGACA+TGG | + | chr7.3:1267756-1267775 | None:intergenic | 35.0% | |
| TGTCAACCAGTTTATTGAGT+AGG | - | chr7.3:1266930-1266949 | MS.gene050619:CDS | 35.0% | |
| TGTGACAACAAACCAAATTC+TGG | - | chr7.3:1268187-1268206 | MS.gene050619:intron | 35.0% | |
| TGTTCATGTCTATCCTGATT+GGG | - | chr7.3:1265304-1265323 | MS.gene050619:CDS | 35.0% | |
| TTCTCTACTGTTTAAGCAGA+TGG | - | chr7.3:1267184-1267203 | MS.gene050619:CDS | 35.0% | |
| !! | GGTAATATTTTGCTTTTCCC+TGG | - | chr7.3:1265461-1265480 | MS.gene050619:CDS | 35.0% |
| !! | GGTCCATTTGTTTGTTATTG+TGG | - | chr7.3:1266554-1266573 | MS.gene050619:intron | 35.0% |
| !! | TGATTAGCCTGATCATAAGA+CGG | + | chr7.3:1266781-1266800 | None:intergenic | 35.0% |
| !!! | CCTTTTGAGTTGTTTATCTC+TGG | - | chr7.3:1265353-1265372 | MS.gene050619:intron | 35.0% |
| !!! | TTGCTACCAAGTACTGATTT+TGG | - | chr7.3:1265428-1265447 | MS.gene050619:intron | 35.0% |
| AATTGGTACAACTTGCAGAC+TGG | - | chr7.3:1266293-1266312 | MS.gene050619:intron | 40.0% | |
| ACGGTATGAAGTCGGAAATA+TGG | + | chr7.3:1267074-1267093 | None:intergenic | 40.0% | |
| ACTGTTTAAGCAGATGGAGA+AGG | - | chr7.3:1267190-1267209 | MS.gene050619:CDS | 40.0% | |
| ATTCCTTGACTATGTGGATG+TGG | + | chr7.3:1266188-1266207 | None:intergenic | 40.0% | |
| CAGTCTTGGTAGATTTCTCT+TGG | + | chr7.3:1265145-1265164 | None:intergenic | 40.0% | |
| CGGTATGAAGTCGGAAATAT+GGG | + | chr7.3:1267073-1267092 | None:intergenic | 40.0% | |
| CTGAGAAATCTGAAAGACTG+AGG | - | chr7.3:1267907-1267926 | MS.gene050619:intron | 40.0% | |
| CTGTTTAAGCAGATGGAGAA+GGG | - | chr7.3:1267191-1267210 | MS.gene050619:CDS | 40.0% | |
| CTTGCAATGTCAATAGGCAA+TGG | - | chr7.3:1266401-1266420 | MS.gene050619:intron | 40.0% | |
| GAAATCTGAAAGACTGAGGA+TGG | - | chr7.3:1267911-1267930 | MS.gene050619:intron | 40.0% | |
| GAAGGGAAAACTCATACACA+AGG | - | chr7.3:1267208-1267227 | MS.gene050619:intron | 40.0% | |
| GATAGACATGAACATTCGTC+TGG | + | chr7.3:1265298-1265317 | None:intergenic | 40.0% | |
| GTTCATCAAGATGTGACACT+TGG | + | chr7.3:1266863-1266882 | None:intergenic | 40.0% | |
| TAAATGCAACCACACGACAT+AGG | + | chr7.3:1265217-1265236 | None:intergenic | 40.0% | |
| TAATAATTCGGGAACTGTGG+AGG | - | chr7.3:1268150-1268169 | MS.gene050619:intron | 40.0% | |
| TAATTGTCTGGACCATGGTT+TGG | - | chr7.3:1265974-1265993 | MS.gene050619:CDS | 40.0% | |
| TAGGACTTGCATCCAATAGT+TGG | + | chr7.3:1268225-1268244 | None:intergenic | 40.0% | |
| TAGGTGCCAAAATCAGTACT+TGG | + | chr7.3:1265437-1265456 | None:intergenic | 40.0% | |
| TATGCAGCAATGTATCCACA+TGG | - | chr7.3:1265853-1265872 | MS.gene050619:intron | 40.0% | |
| TATTTGCCCGTCTTATGATC+AGG | - | chr7.3:1266771-1266790 | MS.gene050619:intron | 40.0% | |
| TGTGGATACATTGCTGCATA+AGG | + | chr7.3:1265853-1265872 | None:intergenic | 40.0% | |
| ! | AACTTTTCGTGCCAGTTCTT+CGG | + | chr7.3:1267835-1267854 | None:intergenic | 40.0% |
| ! | ACGTTGTAGACTCTAAAGAG+TGG | - | chr7.3:1267040-1267059 | MS.gene050619:CDS | 40.0% |
| ! | CAGTACTTGGTAGCAATACA+AGG | + | chr7.3:1265424-1265443 | None:intergenic | 40.0% |
| ! | CATGTCACTGTGTTATTCTG+TGG | - | chr7.3:1267985-1268004 | MS.gene050619:intron | 40.0% |
| ! | GATGGACTTGCAATGTCAAT+AGG | - | chr7.3:1266395-1266414 | MS.gene050619:intron | 40.0% |
| ! | GGAAAGGTTATTGATAGCAG+AGG | + | chr7.3:1266045-1266064 | None:intergenic | 40.0% |
| ! | GTATTTCCAGATGATTTGGG+AGG | + | chr7.3:1266341-1266360 | None:intergenic | 40.0% |
| ! | GTTTTCTGTACTTACAGGTG+CGG | + | chr7.3:1268113-1268132 | None:intergenic | 40.0% |
| ! | TGAAGAAGGCTTTTCAGTCT+TGG | + | chr7.3:1265159-1265178 | None:intergenic | 40.0% |
| !! | ACTGATTTTGGCACCTAGTT+GGG | - | chr7.3:1265440-1265459 | MS.gene050619:intron | 40.0% |
| !! | GATTAGCCTGATCATAAGAC+GGG | + | chr7.3:1266780-1266799 | None:intergenic | 40.0% |
| !!! | TACTGATTTTGGCACCTAGT+TGG | - | chr7.3:1265439-1265458 | MS.gene050619:intron | 40.0% |
| AACAGAGTCATACCAGTGGT+CGG | + | chr7.3:1266835-1266854 | None:intergenic | 45.0% | |
| AAGAAGGAAAAGAAGCCGTG+AGG | - | chr7.3:1266804-1266823 | MS.gene050619:intron | 45.0% | |
| AATACTGAGGGTTCGAGTGA+TGG | - | chr7.3:1266613-1266632 | MS.gene050619:intron | 45.0% | |
| ACACTCCTCACCCATATATG+TGG | - | chr7.3:1265697-1265716 | MS.gene050619:intron | 45.0% | |
| ACAGGTGAGTTGTAGTAAGG+TGG | + | chr7.3:1265666-1265685 | None:intergenic | 45.0% | |
| ACCACTGTTACAGGTGAAGA+AGG | + | chr7.3:1265173-1265192 | None:intergenic | 45.0% | |
| ACCTTACTACAACTCACCTG+TGG | - | chr7.3:1265665-1265684 | MS.gene050619:intron | 45.0% | |
| ACTCCTCACCCATATATGTG+GGG | - | chr7.3:1265699-1265718 | MS.gene050619:intron | 45.0% | |
| AGAAGGAAAAGAAGCCGTGA+GGG | - | chr7.3:1266805-1266824 | MS.gene050619:intron | 45.0% | |
| AGCAATGTATCCACATGGAG+GGG | - | chr7.3:1265858-1265877 | MS.gene050619:intron | 45.0% | |
| AGGCTTACAATAGGAACTGC+AGG | + | chr7.3:1265895-1265914 | None:intergenic | 45.0% | |
| CAAATCGAGAATCTGCTAGG+AGG | - | chr7.3:1267622-1267641 | MS.gene050619:intron | 45.0% | |
| CACTCCTCACCCATATATGT+GGG | - | chr7.3:1265698-1265717 | MS.gene050619:intron | 45.0% | |
| CAGCAATGTATCCACATGGA+GGG | - | chr7.3:1265857-1265876 | MS.gene050619:intron | 45.0% | |
| CAGCATATGATGCCACCTTA+TGG | - | chr7.3:1265823-1265842 | MS.gene050619:intron | 45.0% | |
| CCAGACCCTACTCAATAAAC+TGG | + | chr7.3:1266939-1266958 | None:intergenic | 45.0% | |
| CCAGTTTATTGAGTAGGGTC+TGG | - | chr7.3:1266936-1266955 | MS.gene050619:CDS | 45.0% | |
| GAAGAACAGAGTCATACCAG+TGG | + | chr7.3:1266839-1266858 | None:intergenic | 45.0% | |
| GACATGAACATTCGTCTGGT+TGG | + | chr7.3:1265294-1265313 | None:intergenic | 45.0% | |
| GCATAAGGATGTCCATAAGG+TGG | + | chr7.3:1265838-1265857 | None:intergenic | 45.0% | |
| GCTGCATAAGGATGTCCATA+AGG | + | chr7.3:1265841-1265860 | None:intergenic | 45.0% | |
| GGAACTGTGGAGGATGAAAA+TGG | - | chr7.3:1268160-1268179 | MS.gene050619:intron | 45.0% | |
| GGCTTACAATAGGAACTGCA+GGG | + | chr7.3:1265894-1265913 | None:intergenic | 45.0% | |
| TCATACCTGCTTCCTTAGTC+TGG | + | chr7.3:1267649-1267668 | None:intergenic | 45.0% | |
| TCTACTGTTCCTATGTCGTG+TGG | - | chr7.3:1265205-1265224 | MS.gene050619:CDS | 45.0% | |
| TGAGTATAAACCCCTCCATG+TGG | + | chr7.3:1265871-1265890 | None:intergenic | 45.0% | |
| TGAGTTGTAGTAAGGTGGCA+TGG | + | chr7.3:1265661-1265680 | None:intergenic | 45.0% | |
| TGATGCACTCTCAGCATTCA+AGG | + | chr7.3:1267862-1267881 | None:intergenic | 45.0% | |
| TGCAACTTCGCACCAGAATT+TGG | + | chr7.3:1268202-1268221 | None:intergenic | 45.0% | |
| TGCGAAGTTGCACCAACTAT+TGG | - | chr7.3:1268210-1268229 | MS.gene050619:CDS | 45.0% | |
| ! | GGTGTCACAGGTCAATTAGT+TGG | - | chr7.3:1267289-1267308 | MS.gene050619:intron | 45.0% |
| !! | GGAGGTGTCTCTATGCTTAA+AGG | + | chr7.3:1266323-1266342 | None:intergenic | 45.0% |
| !!! | ATTATTTTAAAATCATTAAA+AGG | + | chr7.3:1267539-1267558 | None:intergenic | 5.0% |
| AAGTCCTAGAGCTGATGCTG+TGG | - | chr7.3:1268237-1268256 | MS.gene050619:CDS | 50.0% | |
| AAGTGACGGCAACACTTCAG+GGG | - | chr7.3:1266636-1266655 | MS.gene050619:intron | 50.0% | |
| AATTGACCTGTGACACCAGC+AGG | + | chr7.3:1267286-1267305 | None:intergenic | 50.0% | |
| ACACTTCAGGGGTGAGTACT+TGG | - | chr7.3:1266647-1266666 | MS.gene050619:intron | 50.0% | |
| AGAATTTCTCAGCTCCAGCG+CGG | + | chr7.3:1267341-1267360 | None:intergenic | 50.0% | |
| ATTGACCTGTGACACCAGCA+GGG | + | chr7.3:1267285-1267304 | None:intergenic | 50.0% | |
| CAATGCAGCAGAAGGTTGTG+GGG | + | chr7.3:1267398-1267417 | None:intergenic | 50.0% | |
| CTCCTCACCCATATATGTGG+GGG | - | chr7.3:1265700-1265719 | MS.gene050619:intron | 50.0% | |
| CTGAAAGCAGGCAATCACAG+AGG | - | chr7.3:1266450-1266469 | MS.gene050619:intron | 50.0% | |
| GAAGTGACGGCAACACTTCA+GGG | - | chr7.3:1266635-1266654 | MS.gene050619:intron | 50.0% | |
| GAGACACCTCCCAAATCATC+TGG | - | chr7.3:1266332-1266351 | MS.gene050619:intron | 50.0% | |
| GCAATGCAGCAGAAGGTTGT+GGG | + | chr7.3:1267399-1267418 | None:intergenic | 50.0% | |
| GCAGCAATGTATCCACATGG+AGG | - | chr7.3:1265856-1265875 | MS.gene050619:intron | 50.0% | |
| GCCACAGGTGAGTTGTAGTA+AGG | + | chr7.3:1265669-1265688 | None:intergenic | 50.0% | |
| GCCTTCTTCACCTGTAACAG+TGG | - | chr7.3:1265169-1265188 | MS.gene050619:CDS | 50.0% | |
| GGTCCACATCCACATAGTCA+AGG | - | chr7.3:1266182-1266201 | MS.gene050619:intron | 50.0% | |
| GTAGAGCTCACCACTGTTAC+AGG | + | chr7.3:1265182-1265201 | None:intergenic | 50.0% | |
| GTCATCGCTGAAGAAACTGC+AGG | + | chr7.3:1267316-1267335 | None:intergenic | 50.0% | |
| TAAGGTGGCATGGCAACTCT+TGG | + | chr7.3:1265651-1265670 | None:intergenic | 50.0% | |
| TACAACTCACCTGTGGCTTC+TGG | - | chr7.3:1265672-1265691 | MS.gene050619:intron | 50.0% | |
| TGACCAACATTGACAGCCAG+AGG | - | chr7.3:1268086-1268105 | MS.gene050619:CDS | 50.0% | |
| ! | GGTTCGAGTGATGGAAGTGA+CGG | - | chr7.3:1266622-1266641 | MS.gene050619:intron | 50.0% |
| AGCGTGAACTGAAGCGTGAG+AGG | - | chr7.3:1267589-1267608 | MS.gene050619:intron | 55.0% | |
| ATATATGTGGGGGCCACCAC+AGG | - | chr7.3:1265710-1265729 | MS.gene050619:intron | 55.0% | |
| CCGAGGCTTGGATACAGGTA+CGG | - | chr7.3:1267422-1267441 | MS.gene050619:intron | 55.0% | |
| CCGTACCTGTATCCAAGCCT+CGG | + | chr7.3:1267425-1267444 | None:intergenic | 55.0% | |
| CGTACCTGTATCCAAGCCTC+GGG | + | chr7.3:1267424-1267443 | None:intergenic | 55.0% | |
| CGTGCTTATTCCCTCCCTTC+AGG | - | chr7.3:1267803-1267822 | MS.gene050619:intron | 55.0% | |
| CTGCTAGGAGGTCCAGACTA+AGG | - | chr7.3:1267634-1267653 | MS.gene050619:intron | 55.0% | |
| GAGGTCCAGACTAAGGAAGC+AGG | - | chr7.3:1267641-1267660 | MS.gene050619:intron | 55.0% | |
| GATTGCCTGCTTTCAGCTCC+AGG | + | chr7.3:1266446-1266465 | None:intergenic | 55.0% | |
| GGAAGTGACGGCAACACTTC+AGG | - | chr7.3:1266634-1266653 | MS.gene050619:intron | 55.0% | |
| GGCAATGCAGCAGAAGGTTG+TGG | + | chr7.3:1267400-1267419 | None:intergenic | 55.0% | |
| GGTCCTCTGGCTGTCAATGT+TGG | + | chr7.3:1268092-1268111 | None:intergenic | 55.0% | |
| GTGAACTGAAGCGTGAGAGG+AGG | - | chr7.3:1267592-1267611 | MS.gene050619:intron | 55.0% | |
| GTGGTGGCCCCCACATATAT+GGG | + | chr7.3:1265710-1265729 | None:intergenic | 55.0% | |
| TACTTACAGGTGCGGTCCTC+TGG | + | chr7.3:1268105-1268124 | None:intergenic | 55.0% | |
| TATTCCCTCCCTTCAGGCTG+AGG | - | chr7.3:1267809-1267828 | MS.gene050619:intron | 55.0% | |
| TGTGGTGGCCCCCACATATA+TGG | + | chr7.3:1265711-1265730 | None:intergenic | 55.0% | |
| TTCTTCGGCCTCAGCCTGAA+GGG | + | chr7.3:1267820-1267839 | None:intergenic | 55.0% | |
| TTGACCTGTGACACCAGCAG+GGG | + | chr7.3:1267284-1267303 | None:intergenic | 55.0% | |
| ! | AGAAGGTTGTGGGGCACTTG+TGG | + | chr7.3:1267389-1267408 | None:intergenic | 55.0% |
| ! | GAAGGTTGTGGGGCACTTGT+GGG | + | chr7.3:1267388-1267407 | None:intergenic | 55.0% |
| ACCTGCATGGCTGCCCAATC+AGG | + | chr7.3:1265320-1265339 | None:intergenic | 60.0% | |
| ACCTGTATCCAAGCCTCGGG+AGG | + | chr7.3:1267421-1267440 | None:intergenic | 60.0% | |
| AGAGCTGATGCTGTGGCTGC+TGG | - | chr7.3:1268244-1268263 | MS.gene050619:CDS | 60.0% | |
| ATGATGGCAGTTGCCCCTGC+TGG | - | chr7.3:1267268-1267287 | MS.gene050619:intron | 60.0% | |
| ATTTCTCAGCTCCAGCGCGG+TGG | + | chr7.3:1267338-1267357 | None:intergenic | 60.0% | |
| CAGGCTCAGCACTCTCAGCA+TGG | + | chr7.3:1266427-1266446 | None:intergenic | 60.0% | |
| CTGAGCCTGGAGCTGAAAGC+AGG | - | chr7.3:1266438-1266457 | MS.gene050619:intron | 60.0% | |
| GCAGCCACAGCATCAGCTCT+AGG | + | chr7.3:1268244-1268263 | None:intergenic | 60.0% | |
| GGAGTGTGACCAGAAGCCAC+AGG | + | chr7.3:1265684-1265703 | None:intergenic | 60.0% | |
| GGCCCCCACATATATGGGTG+AGG | + | chr7.3:1265705-1265724 | None:intergenic | 60.0% | |
| GTTCTTCGGCCTCAGCCTGA+AGG | + | chr7.3:1267821-1267840 | None:intergenic | 60.0% | |
| TCAGGCTGAGGCCGAAGAAC+TGG | - | chr7.3:1267821-1267840 | MS.gene050619:intron | 60.0% | |
| TCCTGATTGGGCAGCCATGC+AGG | - | chr7.3:1265316-1265335 | MS.gene050619:CDS | 60.0% | |
| TCGGGAGGCAATGCAGCAGA+AGG | + | chr7.3:1267406-1267425 | None:intergenic | 60.0% | |
| TTCTGCTGCATTGCCTCCCG+AGG | - | chr7.3:1267405-1267424 | MS.gene050619:intron | 60.0% | |
| ! | CAGTGGTCGGTGTTCCCTCA+CGG | + | chr7.3:1266822-1266841 | None:intergenic | 60.0% |
| !! | CATGCTGAGAGTGCTGAGCC+TGG | - | chr7.3:1266425-1266444 | MS.gene050619:intron | 60.0% |
| CGTGAGGGAACACCGACCAC+TGG | - | chr7.3:1266820-1266839 | MS.gene050619:intron | 65.0% | |
| CTGCATTGCCTCCCGAGGCT+TGG | - | chr7.3:1267410-1267429 | MS.gene050619:intron | 65.0% | |
| GCCTCCCGAGGCTTGGATAC+AGG | - | chr7.3:1267417-1267436 | MS.gene050619:intron | 65.0% | |
| TCGGCCTCAGCCTGAAGGGA+GGG | + | chr7.3:1267816-1267835 | None:intergenic | 65.0% | |
| TTCAGCGATGACCACCGCGC+TGG | - | chr7.3:1267324-1267343 | MS.gene050619:intron | 65.0% | |
| TTCGGCCTCAGCCTGAAGGG+AGG | + | chr7.3:1267817-1267836 | None:intergenic | 65.0% | |
| !! | GTTGCCCCTGCTGGTGTCAC+AGG | - | chr7.3:1267277-1267296 | MS.gene050619:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 1265128 | 1268270 | 1265128 | ID=MS.gene050619 |
| chr7.3 | mRNA | 1265128 | 1268270 | 1265128 | ID=MS.gene050619.t1;Parent=MS.gene050619 |
| chr7.3 | exon | 1268208 | 1268270 | 1268208 | ID=MS.gene050619.t1.exon1;Parent=MS.gene050619.t1 |
| chr7.3 | CDS | 1268208 | 1268270 | 1268208 | ID=cds.MS.gene050619.t1;Parent=MS.gene050619.t1 |
| chr7.3 | exon | 1268061 | 1268114 | 1268061 | ID=MS.gene050619.t1.exon2;Parent=MS.gene050619.t1 |
| chr7.3 | CDS | 1268061 | 1268114 | 1268061 | ID=cds.MS.gene050619.t1;Parent=MS.gene050619.t1 |
| chr7.3 | exon | 1267667 | 1267762 | 1267667 | ID=MS.gene050619.t1.exon3;Parent=MS.gene050619.t1 |
| chr7.3 | CDS | 1267667 | 1267762 | 1267667 | ID=cds.MS.gene050619.t1;Parent=MS.gene050619.t1 |
| chr7.3 | exon | 1267492 | 1267572 | 1267492 | ID=MS.gene050619.t1.exon4;Parent=MS.gene050619.t1 |
| chr7.3 | CDS | 1267492 | 1267572 | 1267492 | ID=cds.MS.gene050619.t1;Parent=MS.gene050619.t1 |
| chr7.3 | exon | 1267175 | 1267216 | 1267175 | ID=MS.gene050619.t1.exon5;Parent=MS.gene050619.t1 |
| chr7.3 | CDS | 1267175 | 1267216 | 1267175 | ID=cds.MS.gene050619.t1;Parent=MS.gene050619.t1 |
| chr7.3 | exon | 1266927 | 1267087 | 1266927 | ID=MS.gene050619.t1.exon6;Parent=MS.gene050619.t1 |
| chr7.3 | CDS | 1266927 | 1267087 | 1266927 | ID=cds.MS.gene050619.t1;Parent=MS.gene050619.t1 |
| chr7.3 | exon | 1266741 | 1266789 | 1266741 | ID=MS.gene050619.t1.exon7;Parent=MS.gene050619.t1 |
| chr7.3 | CDS | 1266741 | 1266789 | 1266741 | ID=cds.MS.gene050619.t1;Parent=MS.gene050619.t1 |
| chr7.3 | exon | 1266557 | 1266605 | 1266557 | ID=MS.gene050619.t1.exon8;Parent=MS.gene050619.t1 |
| chr7.3 | CDS | 1266557 | 1266605 | 1266557 | ID=cds.MS.gene050619.t1;Parent=MS.gene050619.t1 |
| chr7.3 | exon | 1265960 | 1266195 | 1265960 | ID=MS.gene050619.t1.exon9;Parent=MS.gene050619.t1 |
| chr7.3 | CDS | 1265960 | 1266195 | 1265960 | ID=cds.MS.gene050619.t1;Parent=MS.gene050619.t1 |
| chr7.3 | exon | 1265736 | 1265813 | 1265736 | ID=MS.gene050619.t1.exon10;Parent=MS.gene050619.t1 |
| chr7.3 | CDS | 1265736 | 1265813 | 1265736 | ID=cds.MS.gene050619.t1;Parent=MS.gene050619.t1 |
| chr7.3 | exon | 1265448 | 1265573 | 1265448 | ID=MS.gene050619.t1.exon11;Parent=MS.gene050619.t1 |
| chr7.3 | CDS | 1265448 | 1265573 | 1265448 | ID=cds.MS.gene050619.t1;Parent=MS.gene050619.t1 |
| chr7.3 | exon | 1265128 | 1265358 | 1265128 | ID=MS.gene050619.t1.exon12;Parent=MS.gene050619.t1 |
| chr7.3 | CDS | 1265128 | 1265358 | 1265128 | ID=cds.MS.gene050619.t1;Parent=MS.gene050619.t1 |
| Gene Sequence |
| Protein sequence |
