Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050835.t1 | XP_003626073.1 | 93.9 | 247 | 11 | 3 | 1 | 244 | 31 | 276 | 5.30E-122 | 447.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050835.t1 | Q9C519 | 40.2 | 291 | 119 | 8 | 1 | 244 | 90 | 372 | 3.0e-41 | 170.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050835.t1 | G7KUM9 | 93.9 | 247 | 11 | 3 | 1 | 244 | 31 | 276 | 3.8e-122 | 447.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene050835.t1 | TF | WRKY |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050835 | MS.gene072639 | 0.860983 | 1.41E-63 | -1.69E-46 |
MS.gene050835 | MS.gene28630 | 0.907581 | 4.34E-81 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050835.t1 | MTR_7g110720 | 93.487 | 261 | 13 | 3 | 1 | 258 | 31 | 290 | 1.71e-177 | 496 |
MS.gene050835.t1 | MTR_7g110720 | 84.615 | 260 | 11 | 3 | 1 | 258 | 31 | 263 | 7.67e-155 | 437 |
MS.gene050835.t1 | MTR_4g132430 | 42.517 | 294 | 117 | 10 | 1 | 247 | 36 | 324 | 2.63e-62 | 203 |
MS.gene050835.t1 | MTR_2g023930 | 42.244 | 303 | 113 | 10 | 1 | 245 | 68 | 366 | 2.95e-60 | 199 |
MS.gene050835.t1 | MTR_4g132430 | 51.309 | 191 | 64 | 7 | 85 | 247 | 1 | 190 | 6.73e-54 | 178 |
MS.gene050835.t1 | MTR_3g053330 | 39.416 | 274 | 118 | 7 | 30 | 258 | 55 | 325 | 2.35e-51 | 174 |
MS.gene050835.t1 | MTR_2g088000 | 81.522 | 92 | 17 | 0 | 167 | 258 | 332 | 423 | 6.23e-51 | 176 |
MS.gene050835.t1 | MTR_4g049760 | 36.641 | 262 | 102 | 5 | 61 | 258 | 103 | 364 | 2.14e-46 | 162 |
MS.gene050835.t1 | MTR_7g009730 | 37.247 | 247 | 96 | 3 | 71 | 258 | 47 | 293 | 6.78e-46 | 162 |
MS.gene050835.t1 | MTR_2g045360 | 64.423 | 104 | 36 | 1 | 154 | 257 | 182 | 284 | 2.74e-44 | 155 |
MS.gene050835.t1 | MTR_4g094412 | 77.215 | 79 | 18 | 0 | 166 | 244 | 216 | 294 | 8.73e-42 | 149 |
MS.gene050835.t1 | MTR_4g094412 | 77.215 | 79 | 18 | 0 | 166 | 244 | 225 | 303 | 9.21e-42 | 149 |
MS.gene050835.t1 | MTR_4g049790 | 69.565 | 92 | 28 | 0 | 167 | 258 | 295 | 386 | 3.87e-41 | 149 |
MS.gene050835.t1 | MTR_4g107970 | 75.949 | 79 | 19 | 0 | 166 | 244 | 160 | 238 | 2.76e-40 | 146 |
MS.gene050835.t1 | MTR_4g107970 | 75.949 | 79 | 19 | 0 | 166 | 244 | 237 | 315 | 6.08e-40 | 146 |
MS.gene050835.t1 | MTR_4g047580 | 62.222 | 90 | 34 | 0 | 169 | 258 | 266 | 355 | 1.53e-35 | 133 |
MS.gene050835.t1 | MTR_1g013790 | 36.318 | 201 | 83 | 7 | 68 | 254 | 12 | 181 | 2.58e-32 | 119 |
MS.gene050835.t1 | MTR_2g105060 | 33.990 | 203 | 119 | 6 | 62 | 258 | 54 | 247 | 5.43e-29 | 112 |
MS.gene050835.t1 | MTR_1g013760 | 31.707 | 205 | 125 | 3 | 39 | 241 | 6 | 197 | 4.80e-27 | 106 |
MS.gene050835.t1 | MTR_5g094430 | 42.982 | 114 | 60 | 2 | 156 | 265 | 220 | 332 | 4.83e-27 | 108 |
MS.gene050835.t1 | MTR_5g094430 | 48.333 | 60 | 29 | 2 | 185 | 244 | 89 | 146 | 6.90e-11 | 62.4 |
MS.gene050835.t1 | MTR_4g007060 | 31.841 | 201 | 114 | 4 | 68 | 259 | 17 | 203 | 4.92e-27 | 106 |
MS.gene050835.t1 | MTR_5g094430 | 42.982 | 114 | 60 | 2 | 156 | 265 | 198 | 310 | 5.47e-27 | 108 |
MS.gene050835.t1 | MTR_5g094430 | 48.333 | 60 | 29 | 2 | 185 | 244 | 67 | 124 | 8.86e-11 | 62.0 |
MS.gene050835.t1 | MTR_4g007060 | 31.841 | 201 | 114 | 4 | 68 | 259 | 51 | 237 | 6.19e-27 | 106 |
MS.gene050835.t1 | MTR_5g094430 | 42.982 | 114 | 60 | 2 | 156 | 265 | 332 | 444 | 2.18e-26 | 107 |
MS.gene050835.t1 | MTR_5g044695 | 85.417 | 48 | 7 | 0 | 167 | 214 | 60 | 107 | 3.71e-26 | 99.0 |
MS.gene050835.t1 | MTR_6g038890 | 47.967 | 123 | 43 | 5 | 112 | 214 | 97 | 218 | 1.43e-25 | 100 |
MS.gene050835.t1 | MTR_3g056100 | 53.086 | 81 | 37 | 1 | 166 | 246 | 253 | 332 | 1.00e-24 | 102 |
MS.gene050835.t1 | MTR_3g056100 | 53.086 | 81 | 37 | 1 | 166 | 246 | 240 | 319 | 1.10e-24 | 102 |
MS.gene050835.t1 | MTR_3g056100 | 53.086 | 81 | 37 | 1 | 166 | 246 | 397 | 476 | 1.73e-24 | 102 |
MS.gene050835.t1 | MTR_3g056100 | 53.086 | 81 | 37 | 1 | 166 | 246 | 384 | 463 | 1.90e-24 | 102 |
MS.gene050835.t1 | MTR_3g106060 | 53.425 | 73 | 34 | 0 | 169 | 241 | 123 | 195 | 2.94e-24 | 99.0 |
MS.gene050835.t1 | MTR_7g071120 | 44.068 | 118 | 55 | 2 | 129 | 246 | 279 | 385 | 8.46e-24 | 100 |
MS.gene050835.t1 | MTR_7g071120 | 48.333 | 60 | 29 | 2 | 185 | 244 | 167 | 224 | 3.63e-11 | 63.2 |
MS.gene050835.t1 | MTR_7g011820 | 52.326 | 86 | 40 | 1 | 171 | 256 | 397 | 481 | 8.94e-24 | 100 |
MS.gene050835.t1 | MTR_7g011820 | 51.667 | 60 | 27 | 2 | 185 | 244 | 229 | 286 | 3.63e-12 | 66.2 |
MS.gene050835.t1 | MTR_7g109800 | 53.247 | 77 | 35 | 1 | 168 | 244 | 129 | 204 | 9.06e-24 | 97.8 |
MS.gene050835.t1 | MTR_3g031220 | 53.247 | 77 | 35 | 1 | 168 | 244 | 349 | 424 | 1.09e-23 | 100 |
MS.gene050835.t1 | MTR_3g031220 | 50.000 | 62 | 29 | 2 | 185 | 246 | 199 | 258 | 8.82e-13 | 68.2 |
MS.gene050835.t1 | MTR_2g105060 | 32.778 | 180 | 107 | 5 | 85 | 258 | 1 | 172 | 1.09e-23 | 96.3 |
MS.gene050835.t1 | MTR_1g015140 | 52.703 | 74 | 34 | 1 | 169 | 242 | 87 | 159 | 2.34e-23 | 93.6 |
MS.gene050835.t1 | MTR_7g028415 | 45.455 | 88 | 47 | 1 | 173 | 260 | 82 | 168 | 3.85e-23 | 93.2 |
MS.gene050835.t1 | MTR_7g028710 | 45.455 | 88 | 47 | 1 | 173 | 260 | 82 | 168 | 3.85e-23 | 93.2 |
MS.gene050835.t1 | MTR_5g097490 | 49.412 | 85 | 42 | 1 | 169 | 253 | 237 | 320 | 3.91e-23 | 97.4 |
MS.gene050835.t1 | MTR_5g097490 | 39.048 | 105 | 57 | 5 | 153 | 255 | 62 | 161 | 2.29e-12 | 66.6 |
MS.gene050835.t1 | MTR_3g104750 | 52.778 | 72 | 33 | 1 | 171 | 242 | 91 | 161 | 4.52e-23 | 92.8 |
MS.gene050835.t1 | MTR_3g009470 | 50.602 | 83 | 40 | 1 | 167 | 249 | 478 | 559 | 4.77e-23 | 98.6 |
MS.gene050835.t1 | MTR_3g009470 | 52.459 | 61 | 27 | 2 | 185 | 245 | 281 | 339 | 8.73e-14 | 71.2 |
MS.gene050835.t1 | MTR_4g013260 | 53.247 | 77 | 35 | 1 | 168 | 244 | 320 | 395 | 5.10e-23 | 98.2 |
MS.gene050835.t1 | MTR_4g013260 | 35.577 | 104 | 62 | 2 | 154 | 253 | 150 | 252 | 7.48e-15 | 74.3 |
MS.gene050835.t1 | MTR_7g080020 | 40.945 | 127 | 66 | 4 | 128 | 246 | 429 | 554 | 6.44e-23 | 98.2 |
MS.gene050835.t1 | MTR_7g080020 | 50.000 | 60 | 28 | 2 | 185 | 244 | 281 | 338 | 1.26e-11 | 64.7 |
MS.gene050835.t1 | MTR_2g033820 | 50.649 | 77 | 37 | 1 | 168 | 244 | 187 | 262 | 1.27e-22 | 95.9 |
MS.gene050835.t1 | MTR_5g042920 | 51.765 | 85 | 37 | 2 | 171 | 252 | 307 | 390 | 1.35e-22 | 96.3 |
MS.gene050835.t1 | MTR_5g042920 | 44.444 | 72 | 38 | 2 | 185 | 256 | 152 | 221 | 6.78e-12 | 65.5 |
MS.gene050835.t1 | MTR_4g082580 | 44.554 | 101 | 55 | 1 | 155 | 255 | 249 | 348 | 1.93e-22 | 95.5 |
MS.gene050835.t1 | MTR_5g074400 | 45.977 | 87 | 46 | 1 | 168 | 254 | 404 | 489 | 4.97e-22 | 95.5 |
MS.gene050835.t1 | MTR_5g074400 | 50.000 | 60 | 28 | 2 | 185 | 244 | 244 | 301 | 8.80e-13 | 68.2 |
MS.gene050835.t1 | MTR_7g080000 | 41.463 | 123 | 65 | 4 | 128 | 246 | 374 | 493 | 5.07e-22 | 95.5 |
MS.gene050835.t1 | MTR_7g080000 | 47.692 | 65 | 32 | 2 | 180 | 244 | 230 | 292 | 6.10e-12 | 65.9 |
MS.gene050835.t1 | MTR_8g096730 | 43.902 | 82 | 45 | 1 | 169 | 250 | 55 | 135 | 5.24e-22 | 89.4 |
MS.gene050835.t1 | MTR_4g094588 | 45.263 | 95 | 46 | 2 | 171 | 265 | 165 | 253 | 1.81e-21 | 92.0 |
MS.gene050835.t1 | MTR_1g086790 | 50.649 | 77 | 37 | 1 | 168 | 244 | 142 | 217 | 1.87e-21 | 92.0 |
MS.gene050835.t1 | MTR_4g122530 | 47.059 | 85 | 43 | 2 | 168 | 252 | 192 | 274 | 2.14e-20 | 90.1 |
MS.gene050835.t1 | MTR_7g079010 | 38.667 | 150 | 64 | 6 | 120 | 242 | 50 | 198 | 2.44e-20 | 87.0 |
MS.gene050835.t1 | MTR_7g109600 | 50.704 | 71 | 35 | 0 | 182 | 252 | 51 | 121 | 5.00e-20 | 87.0 |
MS.gene050835.t1 | MTR_7g100510 | 47.945 | 73 | 37 | 1 | 172 | 244 | 349 | 420 | 5.17e-20 | 89.0 |
MS.gene050835.t1 | MTR_7g100510 | 50.000 | 60 | 28 | 2 | 185 | 244 | 190 | 247 | 9.29e-12 | 65.1 |
MS.gene050835.t1 | MTR_4g130900 | 50.633 | 79 | 38 | 1 | 166 | 244 | 341 | 418 | 5.97e-20 | 89.4 |
MS.gene050835.t1 | MTR_8g092010 | 45.946 | 74 | 39 | 1 | 171 | 244 | 95 | 167 | 6.20e-20 | 85.1 |
MS.gene050835.t1 | MTR_8g087000 | 50.588 | 85 | 40 | 2 | 165 | 248 | 58 | 141 | 9.61e-20 | 85.9 |
MS.gene050835.t1 | MTR_8g087000 | 50.588 | 85 | 40 | 2 | 165 | 248 | 57 | 140 | 9.73e-20 | 85.9 |
MS.gene050835.t1 | MTR_5g043880 | 41.228 | 114 | 53 | 3 | 128 | 241 | 81 | 180 | 1.27e-19 | 86.3 |
MS.gene050835.t1 | MTR_1g009613 | 48.649 | 74 | 38 | 0 | 168 | 241 | 246 | 319 | 8.75e-19 | 84.7 |
MS.gene050835.t1 | MTR_1g077780 | 45.349 | 86 | 43 | 2 | 168 | 253 | 46 | 127 | 1.14e-18 | 80.5 |
MS.gene050835.t1 | MTR_5g091390 | 48.649 | 74 | 37 | 1 | 171 | 244 | 144 | 216 | 1.19e-18 | 84.0 |
MS.gene050835.t1 | MTR_2g016770 | 54.839 | 62 | 28 | 0 | 184 | 245 | 35 | 96 | 1.22e-18 | 82.4 |
MS.gene050835.t1 | MTR_2g016770 | 54.839 | 62 | 28 | 0 | 184 | 245 | 27 | 88 | 1.60e-18 | 81.6 |
MS.gene050835.t1 | MTR_2g032030 | 45.122 | 82 | 45 | 0 | 184 | 265 | 267 | 348 | 2.00e-18 | 84.7 |
MS.gene050835.t1 | MTR_8g028565 | 50.000 | 72 | 36 | 0 | 182 | 253 | 153 | 224 | 2.40e-18 | 83.6 |
MS.gene050835.t1 | MTR_3g095080 | 47.297 | 74 | 38 | 1 | 168 | 241 | 128 | 200 | 3.69e-18 | 80.9 |
MS.gene050835.t1 | MTR_5g016610 | 47.297 | 74 | 39 | 0 | 170 | 243 | 185 | 258 | 3.70e-18 | 82.0 |
MS.gene050835.t1 | MTR_3g095040 | 42.857 | 91 | 47 | 2 | 154 | 244 | 92 | 177 | 3.76e-18 | 80.9 |
MS.gene050835.t1 | MTR_1g070455 | 52.239 | 67 | 32 | 0 | 185 | 251 | 294 | 360 | 3.93e-18 | 83.2 |
MS.gene050835.t1 | MTR_4g094908 | 53.226 | 62 | 29 | 0 | 185 | 246 | 267 | 328 | 3.96e-18 | 82.8 |
MS.gene050835.t1 | MTR_2g032030 | 45.122 | 82 | 45 | 0 | 184 | 265 | 267 | 348 | 4.05e-18 | 83.6 |
MS.gene050835.t1 | MTR_3g095080 | 47.297 | 74 | 38 | 1 | 168 | 241 | 152 | 224 | 4.44e-18 | 81.3 |
MS.gene050835.t1 | MTR_2g083870 | 52.857 | 70 | 33 | 0 | 175 | 244 | 71 | 140 | 5.03e-18 | 81.6 |
MS.gene050835.t1 | MTR_8g007270 | 46.667 | 75 | 39 | 1 | 167 | 241 | 137 | 210 | 9.55e-18 | 80.1 |
MS.gene050835.t1 | MTR_7g079040 | 50.000 | 72 | 36 | 0 | 182 | 253 | 152 | 223 | 1.87e-17 | 80.9 |
MS.gene050835.t1 | MTR_4g127040 | 49.296 | 71 | 36 | 0 | 171 | 241 | 232 | 302 | 3.85e-17 | 79.7 |
MS.gene050835.t1 | MTR_8g092140 | 51.562 | 64 | 30 | 1 | 178 | 241 | 154 | 216 | 5.13e-17 | 78.2 |
MS.gene050835.t1 | MTR_0117s0040 | 40.860 | 93 | 49 | 1 | 171 | 263 | 61 | 147 | 1.08e-16 | 77.4 |
MS.gene050835.t1 | MTR_2g024350 | 46.970 | 66 | 35 | 0 | 179 | 244 | 3 | 68 | 5.83e-16 | 75.1 |
MS.gene050835.t1 | MTR_3g108960 | 44.595 | 74 | 41 | 0 | 168 | 241 | 298 | 371 | 9.74e-16 | 76.6 |
MS.gene050835.t1 | MTR_3g090860 | 53.333 | 75 | 32 | 2 | 168 | 240 | 118 | 191 | 2.07e-15 | 75.1 |
MS.gene050835.t1 | MTR_1g099600 | 44.444 | 72 | 40 | 0 | 182 | 253 | 183 | 254 | 2.70e-15 | 74.7 |
MS.gene050835.t1 | MTR_8g098945 | 42.254 | 71 | 41 | 0 | 183 | 253 | 128 | 198 | 2.81e-15 | 73.9 |
MS.gene050835.t1 | MTR_2g024380 | 46.970 | 66 | 35 | 0 | 179 | 244 | 246 | 311 | 2.96e-15 | 75.5 |
MS.gene050835.t1 | MTR_4g007060 | 30.675 | 163 | 90 | 4 | 68 | 221 | 51 | 199 | 4.67e-15 | 72.8 |
MS.gene050835.t1 | MTR_7g062220 | 54.688 | 64 | 28 | 1 | 182 | 245 | 122 | 184 | 7.81e-15 | 73.2 |
MS.gene050835.t1 | MTR_1g078260 | 45.833 | 72 | 37 | 2 | 171 | 241 | 234 | 304 | 4.67e-14 | 72.0 |
MS.gene050835.t1 | MTR_6g086555 | 46.667 | 75 | 38 | 2 | 171 | 244 | 193 | 266 | 4.88e-14 | 71.6 |
MS.gene050835.t1 | MTR_3g009470 | 52.459 | 61 | 27 | 2 | 185 | 245 | 281 | 339 | 5.27e-14 | 71.6 |
MS.gene050835.t1 | MTR_8g027860 | 36.842 | 114 | 69 | 2 | 130 | 240 | 81 | 194 | 1.28e-13 | 70.1 |
MS.gene050835.t1 | MTR_8g099350 | 50.000 | 74 | 34 | 2 | 169 | 240 | 118 | 190 | 2.86e-13 | 69.3 |
MS.gene050835.t1 | MTR_3g031220 | 50.000 | 62 | 29 | 2 | 185 | 246 | 199 | 258 | 5.20e-13 | 68.6 |
MS.gene050835.t1 | MTR_5g067680 | 42.353 | 85 | 37 | 2 | 185 | 257 | 203 | 287 | 1.79e-12 | 66.6 |
MS.gene050835.t1 | MTR_7g073430 | 38.462 | 117 | 68 | 3 | 126 | 240 | 66 | 180 | 5.28e-12 | 65.1 |
MS.gene050835.t1 | MTR_7g073380 | 34.188 | 117 | 74 | 2 | 126 | 240 | 66 | 181 | 1.10e-11 | 63.9 |
MS.gene050835.t1 | MTR_5g097500 | 36.364 | 77 | 47 | 2 | 174 | 250 | 220 | 294 | 9.56e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050835.t1 | AT4G01720 | 47.368 | 228 | 99 | 4 | 39 | 245 | 73 | 300 | 1.27e-61 | 202 |
MS.gene050835.t1 | AT4G04450 | 40.550 | 291 | 104 | 5 | 37 | 258 | 76 | 366 | 3.07e-61 | 202 |
MS.gene050835.t1 | AT4G04450 | 43.529 | 255 | 84 | 4 | 64 | 258 | 18 | 272 | 2.28e-60 | 197 |
MS.gene050835.t1 | AT1G62300 | 89.873 | 79 | 8 | 0 | 167 | 245 | 295 | 373 | 1.50e-50 | 174 |
MS.gene050835.t1 | AT4G22070 | 88.608 | 79 | 9 | 0 | 167 | 245 | 280 | 358 | 1.27e-48 | 169 |
MS.gene050835.t1 | AT4G22070 | 88.608 | 79 | 9 | 0 | 167 | 245 | 280 | 358 | 1.27e-48 | 169 |
MS.gene050835.t1 | AT4G22070 | 88.608 | 79 | 9 | 0 | 167 | 245 | 280 | 358 | 1.27e-48 | 169 |
MS.gene050835.t1 | AT4G22070 | 88.608 | 79 | 9 | 0 | 167 | 245 | 280 | 358 | 1.27e-48 | 169 |
MS.gene050835.t1 | AT1G68150 | 40.930 | 215 | 99 | 3 | 68 | 257 | 97 | 308 | 2.55e-46 | 159 |
MS.gene050835.t1 | AT5G15130 | 73.626 | 91 | 24 | 0 | 168 | 258 | 169 | 259 | 6.21e-45 | 158 |
MS.gene050835.t1 | AT5G15130 | 73.626 | 91 | 24 | 0 | 168 | 258 | 211 | 301 | 8.35e-45 | 158 |
MS.gene050835.t1 | AT1G18860 | 73.494 | 83 | 20 | 1 | 162 | 244 | 219 | 299 | 3.22e-41 | 149 |
MS.gene050835.t1 | AT1G69810 | 60.185 | 108 | 40 | 2 | 152 | 258 | 173 | 278 | 1.65e-37 | 136 |
MS.gene050835.t1 | AT1G69810 | 60.185 | 108 | 40 | 2 | 152 | 258 | 115 | 220 | 1.89e-37 | 134 |
MS.gene050835.t1 | AT4G31800 | 37.383 | 214 | 116 | 6 | 54 | 253 | 36 | 245 | 2.79e-29 | 112 |
MS.gene050835.t1 | AT1G80840 | 34.597 | 211 | 120 | 7 | 39 | 244 | 9 | 206 | 3.15e-26 | 104 |
MS.gene050835.t1 | AT2G25000 | 32.195 | 205 | 123 | 3 | 45 | 249 | 23 | 211 | 7.90e-26 | 102 |
MS.gene050835.t1 | AT2G25000 | 33.333 | 183 | 107 | 2 | 67 | 249 | 1 | 168 | 2.45e-25 | 100 |
MS.gene050835.t1 | AT2G25000 | 33.333 | 183 | 107 | 2 | 67 | 249 | 1 | 168 | 2.45e-25 | 100 |
MS.gene050835.t1 | AT2G25000 | 33.152 | 184 | 108 | 2 | 66 | 249 | 22 | 190 | 2.53e-25 | 100 |
MS.gene050835.t1 | AT4G26640 | 48.315 | 89 | 45 | 1 | 166 | 254 | 187 | 274 | 1.64e-24 | 101 |
MS.gene050835.t1 | AT4G26640 | 44.286 | 70 | 37 | 2 | 175 | 244 | 26 | 93 | 2.80e-11 | 63.5 |
MS.gene050835.t1 | AT4G26640 | 48.315 | 89 | 45 | 1 | 166 | 254 | 187 | 274 | 1.64e-24 | 101 |
MS.gene050835.t1 | AT4G26640 | 44.286 | 70 | 37 | 2 | 175 | 244 | 26 | 93 | 2.80e-11 | 63.5 |
MS.gene050835.t1 | AT4G26640 | 48.315 | 89 | 45 | 1 | 166 | 254 | 187 | 274 | 1.64e-24 | 101 |
MS.gene050835.t1 | AT4G26640 | 44.286 | 70 | 37 | 2 | 175 | 244 | 26 | 93 | 2.80e-11 | 63.5 |
MS.gene050835.t1 | AT4G26640 | 48.315 | 89 | 45 | 1 | 166 | 254 | 187 | 274 | 1.64e-24 | 101 |
MS.gene050835.t1 | AT4G26640 | 44.286 | 70 | 37 | 2 | 175 | 244 | 26 | 93 | 2.80e-11 | 63.5 |
MS.gene050835.t1 | AT4G31800 | 50.000 | 92 | 41 | 2 | 167 | 253 | 89 | 180 | 2.58e-24 | 98.2 |
MS.gene050835.t1 | AT4G26640 | 53.165 | 79 | 36 | 1 | 166 | 244 | 291 | 368 | 5.30e-24 | 100 |
MS.gene050835.t1 | AT4G26640 | 44.286 | 70 | 37 | 2 | 175 | 244 | 130 | 197 | 3.65e-11 | 63.2 |
MS.gene050835.t1 | AT4G26640 | 53.165 | 79 | 36 | 1 | 166 | 244 | 323 | 400 | 5.75e-24 | 100 |
MS.gene050835.t1 | AT4G26640 | 44.286 | 70 | 37 | 2 | 175 | 244 | 162 | 229 | 3.60e-11 | 63.5 |
MS.gene050835.t1 | AT4G26640 | 53.165 | 79 | 36 | 1 | 166 | 244 | 363 | 440 | 7.21e-24 | 100 |
MS.gene050835.t1 | AT4G26640 | 44.286 | 70 | 37 | 2 | 175 | 244 | 202 | 269 | 3.91e-11 | 63.2 |
MS.gene050835.t1 | AT5G49520 | 51.948 | 77 | 36 | 1 | 168 | 244 | 205 | 280 | 8.21e-24 | 99.4 |
MS.gene050835.t1 | AT2G38470 | 50.633 | 79 | 38 | 1 | 168 | 246 | 346 | 423 | 1.12e-23 | 100 |
MS.gene050835.t1 | AT2G38470 | 50.000 | 60 | 28 | 2 | 185 | 244 | 185 | 242 | 6.26e-13 | 68.6 |
MS.gene050835.t1 | AT5G13080 | 43.333 | 90 | 50 | 1 | 171 | 260 | 54 | 142 | 1.23e-23 | 93.6 |
MS.gene050835.t1 | AT4G18170 | 44.348 | 115 | 48 | 3 | 145 | 244 | 118 | 231 | 2.35e-23 | 97.1 |
MS.gene050835.t1 | AT2G04880 | 45.882 | 85 | 45 | 1 | 170 | 254 | 269 | 352 | 3.49e-23 | 98.2 |
MS.gene050835.t1 | AT2G04880 | 45.070 | 71 | 37 | 2 | 182 | 252 | 109 | 177 | 5.09e-13 | 68.9 |
MS.gene050835.t1 | AT5G26170 | 51.389 | 72 | 34 | 1 | 170 | 241 | 99 | 169 | 4.02e-23 | 93.2 |
MS.gene050835.t1 | AT2G04880 | 45.882 | 85 | 45 | 1 | 170 | 254 | 293 | 376 | 4.68e-23 | 98.2 |
MS.gene050835.t1 | AT2G04880 | 45.070 | 71 | 37 | 2 | 182 | 252 | 109 | 177 | 5.77e-13 | 68.6 |
MS.gene050835.t1 | AT1G13960 | 55.405 | 74 | 32 | 1 | 171 | 244 | 243 | 315 | 9.68e-23 | 96.3 |
MS.gene050835.t1 | AT1G13960 | 37.903 | 124 | 64 | 6 | 142 | 257 | 28 | 146 | 1.05e-13 | 70.5 |
MS.gene050835.t1 | AT1G29860 | 46.067 | 89 | 44 | 2 | 168 | 256 | 120 | 204 | 1.47e-22 | 94.4 |
MS.gene050835.t1 | AT1G13960 | 55.405 | 74 | 32 | 1 | 171 | 244 | 396 | 468 | 1.53e-22 | 96.7 |
MS.gene050835.t1 | AT1G13960 | 37.903 | 124 | 64 | 6 | 142 | 257 | 181 | 299 | 1.91e-13 | 70.1 |
MS.gene050835.t1 | AT5G07100 | 51.948 | 77 | 36 | 1 | 168 | 244 | 125 | 200 | 2.05e-22 | 92.4 |
MS.gene050835.t1 | AT5G07100 | 38.667 | 75 | 44 | 2 | 185 | 259 | 25 | 97 | 6.19e-11 | 60.8 |
MS.gene050835.t1 | AT5G07100 | 51.948 | 77 | 36 | 1 | 168 | 244 | 125 | 200 | 2.05e-22 | 92.4 |
MS.gene050835.t1 | AT5G07100 | 38.667 | 75 | 44 | 2 | 185 | 259 | 25 | 97 | 6.19e-11 | 60.8 |
MS.gene050835.t1 | AT5G07100 | 51.948 | 77 | 36 | 1 | 168 | 244 | 125 | 200 | 2.05e-22 | 92.4 |
MS.gene050835.t1 | AT5G07100 | 38.667 | 75 | 44 | 2 | 185 | 259 | 25 | 97 | 6.19e-11 | 60.8 |
MS.gene050835.t1 | AT5G07100 | 51.948 | 77 | 36 | 1 | 168 | 244 | 125 | 200 | 2.05e-22 | 92.4 |
MS.gene050835.t1 | AT5G07100 | 38.667 | 75 | 44 | 2 | 185 | 259 | 25 | 97 | 6.19e-11 | 60.8 |
MS.gene050835.t1 | AT5G56270 | 51.250 | 80 | 38 | 1 | 167 | 246 | 470 | 548 | 2.98e-22 | 96.3 |
MS.gene050835.t1 | AT5G56270 | 49.180 | 61 | 29 | 2 | 185 | 245 | 274 | 332 | 3.45e-11 | 63.5 |
MS.gene050835.t1 | AT2G03340 | 51.899 | 79 | 37 | 1 | 171 | 249 | 402 | 479 | 4.48e-22 | 95.5 |
MS.gene050835.t1 | AT2G03340 | 50.000 | 60 | 28 | 2 | 185 | 244 | 251 | 308 | 1.18e-12 | 67.8 |
MS.gene050835.t1 | AT5G07100 | 51.948 | 77 | 36 | 1 | 168 | 244 | 218 | 293 | 5.35e-22 | 93.2 |
MS.gene050835.t1 | AT5G07100 | 30.986 | 142 | 79 | 5 | 123 | 259 | 63 | 190 | 5.37e-11 | 62.4 |
MS.gene050835.t1 | AT2G46130 | 46.237 | 93 | 39 | 2 | 150 | 242 | 6 | 87 | 8.03e-22 | 87.8 |
MS.gene050835.t1 | AT5G46350 | 44.681 | 94 | 51 | 1 | 171 | 264 | 170 | 262 | 1.29e-21 | 92.4 |
MS.gene050835.t1 | AT5G41570 | 52.000 | 75 | 35 | 1 | 168 | 242 | 82 | 155 | 2.23e-21 | 88.6 |
MS.gene050835.t1 | AT3G01970 | 51.351 | 74 | 35 | 1 | 170 | 243 | 51 | 123 | 2.93e-21 | 87.4 |
MS.gene050835.t1 | AT2G30250 | 50.633 | 79 | 38 | 1 | 168 | 246 | 312 | 389 | 3.05e-21 | 92.4 |
MS.gene050835.t1 | AT1G64000 | 52.778 | 72 | 33 | 1 | 171 | 242 | 101 | 171 | 4.30e-21 | 88.6 |
MS.gene050835.t1 | AT4G30935 | 50.633 | 79 | 38 | 1 | 166 | 244 | 313 | 390 | 5.85e-21 | 92.0 |
MS.gene050835.t1 | AT2G47260 | 47.619 | 84 | 43 | 1 | 168 | 251 | 158 | 240 | 8.44e-21 | 90.5 |
MS.gene050835.t1 | AT4G26440 | 49.367 | 79 | 39 | 1 | 168 | 246 | 356 | 433 | 1.64e-20 | 90.9 |
MS.gene050835.t1 | AT4G26440 | 49.180 | 61 | 29 | 2 | 185 | 245 | 179 | 237 | 8.32e-12 | 65.5 |
MS.gene050835.t1 | AT3G01080 | 51.351 | 74 | 35 | 1 | 171 | 244 | 293 | 365 | 2.01e-20 | 90.1 |
MS.gene050835.t1 | AT3G01080 | 51.667 | 60 | 27 | 2 | 185 | 244 | 168 | 225 | 4.64e-11 | 62.8 |
MS.gene050835.t1 | AT3G01080 | 51.351 | 74 | 35 | 1 | 171 | 244 | 331 | 403 | 2.61e-20 | 90.1 |
MS.gene050835.t1 | AT3G01080 | 51.667 | 60 | 27 | 2 | 185 | 244 | 206 | 263 | 5.34e-11 | 62.8 |
MS.gene050835.t1 | AT3G62340 | 45.361 | 97 | 47 | 2 | 168 | 259 | 102 | 197 | 3.27e-20 | 87.8 |
MS.gene050835.t1 | AT1G55600 | 46.835 | 79 | 41 | 1 | 168 | 246 | 291 | 368 | 8.95e-20 | 88.6 |
MS.gene050835.t1 | AT1G29280 | 47.500 | 80 | 41 | 1 | 165 | 244 | 56 | 134 | 9.79e-20 | 86.3 |
MS.gene050835.t1 | AT2G23320 | 47.619 | 84 | 36 | 1 | 168 | 243 | 216 | 299 | 1.47e-19 | 86.7 |
MS.gene050835.t1 | AT1G69310 | 38.835 | 103 | 53 | 2 | 139 | 241 | 111 | 203 | 1.58e-19 | 86.3 |
MS.gene050835.t1 | AT1G69310 | 38.835 | 103 | 53 | 2 | 139 | 241 | 111 | 203 | 1.58e-19 | 86.3 |
MS.gene050835.t1 | AT1G69310 | 38.835 | 103 | 53 | 2 | 139 | 241 | 111 | 203 | 1.58e-19 | 86.3 |
MS.gene050835.t1 | AT2G30590 | 47.126 | 87 | 38 | 1 | 168 | 246 | 289 | 375 | 2.44e-19 | 86.7 |
MS.gene050835.t1 | AT3G58710 | 46.154 | 91 | 43 | 2 | 175 | 265 | 62 | 146 | 7.60e-19 | 84.0 |
MS.gene050835.t1 | AT3G58710 | 46.154 | 91 | 43 | 2 | 175 | 265 | 61 | 145 | 7.96e-19 | 84.0 |
MS.gene050835.t1 | AT5G28650 | 46.341 | 82 | 36 | 1 | 168 | 241 | 238 | 319 | 8.54e-19 | 84.7 |
MS.gene050835.t1 | AT5G64810 | 47.887 | 71 | 36 | 1 | 171 | 241 | 97 | 166 | 9.75e-19 | 82.0 |
MS.gene050835.t1 | AT5G52830 | 52.778 | 72 | 34 | 0 | 182 | 253 | 163 | 234 | 1.68e-18 | 84.0 |
MS.gene050835.t1 | AT4G24240 | 50.685 | 73 | 36 | 0 | 171 | 243 | 268 | 340 | 1.83e-18 | 84.0 |
MS.gene050835.t1 | AT2G34830 | 45.783 | 83 | 44 | 1 | 170 | 251 | 200 | 282 | 2.74e-18 | 84.3 |
MS.gene050835.t1 | AT2G34830 | 45.783 | 83 | 44 | 1 | 170 | 251 | 209 | 291 | 3.28e-18 | 84.0 |
MS.gene050835.t1 | AT3G04670 | 45.122 | 82 | 37 | 1 | 168 | 241 | 238 | 319 | 3.32e-18 | 83.2 |
MS.gene050835.t1 | AT4G31800 | 35.714 | 182 | 99 | 6 | 54 | 221 | 36 | 213 | 4.25e-18 | 81.3 |
MS.gene050835.t1 | AT1G30650 | 45.783 | 83 | 44 | 1 | 170 | 251 | 202 | 284 | 4.39e-18 | 83.6 |
MS.gene050835.t1 | AT4G39410 | 47.297 | 74 | 38 | 1 | 168 | 241 | 207 | 279 | 7.70e-18 | 81.6 |
MS.gene050835.t1 | AT2G24570 | 57.895 | 57 | 24 | 0 | 185 | 241 | 244 | 300 | 1.49e-17 | 81.3 |
MS.gene050835.t1 | AT2G44745 | 45.333 | 75 | 40 | 1 | 167 | 241 | 128 | 201 | 1.52e-17 | 79.3 |
MS.gene050835.t1 | AT2G37260 | 49.333 | 75 | 34 | 2 | 179 | 250 | 262 | 335 | 2.68e-17 | 80.9 |
MS.gene050835.t1 | AT2G37260 | 41.935 | 93 | 43 | 4 | 162 | 249 | 65 | 151 | 1.56e-13 | 70.1 |
MS.gene050835.t1 | AT2G37260 | 49.333 | 75 | 34 | 2 | 179 | 250 | 264 | 337 | 2.69e-17 | 80.9 |
MS.gene050835.t1 | AT2G37260 | 41.935 | 93 | 43 | 4 | 162 | 249 | 67 | 153 | 1.54e-13 | 70.1 |
MS.gene050835.t1 | AT4G01250 | 48.611 | 72 | 37 | 0 | 182 | 253 | 126 | 197 | 2.95e-17 | 80.1 |
MS.gene050835.t1 | AT4G31550 | 56.140 | 57 | 25 | 0 | 185 | 241 | 247 | 303 | 4.06e-17 | 80.1 |
MS.gene050835.t1 | AT4G31550 | 56.140 | 57 | 25 | 0 | 185 | 241 | 246 | 302 | 4.36e-17 | 79.7 |
MS.gene050835.t1 | AT2G37260 | 49.333 | 75 | 34 | 2 | 179 | 250 | 344 | 417 | 5.42e-17 | 80.5 |
MS.gene050835.t1 | AT2G37260 | 41.935 | 93 | 43 | 4 | 162 | 249 | 147 | 233 | 2.57e-13 | 69.7 |
MS.gene050835.t1 | AT4G23550 | 44.872 | 78 | 43 | 0 | 179 | 256 | 135 | 212 | 1.11e-16 | 78.6 |
MS.gene050835.t1 | AT2G46130 | 43.011 | 93 | 38 | 3 | 150 | 242 | 6 | 83 | 1.39e-16 | 73.9 |
MS.gene050835.t1 | AT5G45050 | 47.059 | 68 | 36 | 0 | 184 | 251 | 1152 | 1219 | 6.77e-15 | 74.7 |
MS.gene050835.t1 | AT5G45050 | 47.059 | 68 | 36 | 0 | 184 | 251 | 1180 | 1247 | 6.92e-15 | 74.7 |
MS.gene050835.t1 | AT5G45050 | 47.059 | 68 | 36 | 0 | 184 | 251 | 1041 | 1108 | 8.12e-15 | 74.7 |
MS.gene050835.t1 | AT1G69310 | 35.922 | 103 | 52 | 3 | 139 | 241 | 111 | 199 | 2.31e-14 | 71.6 |
MS.gene050835.t1 | AT5G43290 | 31.159 | 138 | 75 | 5 | 119 | 241 | 38 | 170 | 8.35e-14 | 70.1 |
MS.gene050835.t1 | AT2G21900 | 43.548 | 62 | 34 | 1 | 183 | 244 | 108 | 168 | 1.97e-13 | 67.8 |
MS.gene050835.t1 | AT5G45260 | 43.678 | 87 | 43 | 2 | 169 | 253 | 1197 | 1279 | 9.36e-13 | 68.6 |
MS.gene050835.t1 | AT2G46400 | 44.000 | 75 | 40 | 1 | 168 | 240 | 88 | 162 | 1.29e-12 | 67.0 |
MS.gene050835.t1 | AT2G40740 | 46.667 | 75 | 35 | 2 | 185 | 254 | 174 | 248 | 1.62e-12 | 66.6 |
MS.gene050835.t1 | AT2G40740 | 46.667 | 75 | 35 | 2 | 185 | 254 | 183 | 257 | 2.19e-12 | 66.2 |
MS.gene050835.t1 | AT5G24110 | 44.595 | 74 | 38 | 2 | 169 | 240 | 99 | 171 | 9.65e-12 | 64.3 |
MS.gene050835.t1 | AT3G01080 | 51.667 | 60 | 27 | 2 | 185 | 244 | 206 | 263 | 4.18e-11 | 62.8 |
MS.gene050835.t1 | AT3G56400 | 34.821 | 112 | 70 | 2 | 132 | 240 | 67 | 178 | 5.45e-11 | 62.0 |
MS.gene050835.t1 | AT1G66560 | 45.588 | 68 | 35 | 1 | 175 | 240 | 94 | 161 | 6.79e-11 | 61.2 |
Find 54 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTTAAAACGTTACGTTAAC+AGG | 0.198700 | 7.1:-4338888 | None:intergenic |
AGGTATAATTCCTAGCTAAA+TGG | 0.323030 | 7.1:-4343443 | None:intergenic |
GGATGTCAGTGGAGGAAATA+TGG | 0.326047 | 7.1:+4341714 | MS.gene050835:CDS |
GAATAATAATGCATTGGTTT+CGG | 0.333185 | 7.1:+4341285 | MS.gene050835:CDS |
TTGTAGTTGGCTATAGCTTT+TGG | 0.341519 | 7.1:-4339264 | None:intergenic |
TTTATTACCTGTTTGCGAAC+TGG | 0.349172 | 7.1:-4341804 | None:intergenic |
GCAGTTGCAGCTGGTGGGAG+TGG | 0.382339 | 7.1:-4343376 | None:intergenic |
TTGCGTGGGTTCTTCTAACT+TGG | 0.393374 | 7.1:-4341365 | None:intergenic |
GAATCTTCTGCAGGATGATC+AGG | 0.403070 | 7.1:-4341331 | None:intergenic |
TTATTACCTGTTTGCGAACT+GGG | 0.426338 | 7.1:-4341803 | None:intergenic |
TTTGCTATGGCAGTTGCAGC+TGG | 0.458465 | 7.1:-4343385 | None:intergenic |
CGATAGTAGGCACGAGGACA+AGG | 0.465488 | 7.1:-4341759 | None:intergenic |
AGCTTCTGATCTTGCACGTA+TGG | 0.466004 | 7.1:-4341419 | None:intergenic |
TGCCTACTATCGTTGCACTA+TGG | 0.467155 | 7.1:+4341770 | MS.gene050835:CDS |
CAGAATGTGGAAGAAAATCA+TGG | 0.469000 | 7.1:+4341238 | MS.gene050835:intron |
TGCCATAGCAAACACAATAT+CGG | 0.470288 | 7.1:+4343396 | MS.gene050835:CDS |
CAGTTGCAGCTGGTGGGAGT+GGG | 0.476377 | 7.1:-4343375 | None:intergenic |
TCTTGAAAATTCTGAAACTG+AGG | 0.483824 | 7.1:+4339055 | MS.gene050835:CDS |
AGGATGCCCAGTTCGCAAAC+AGG | 0.487149 | 7.1:+4341797 | MS.gene050835:CDS |
CTGGTGGGAGTGGGTGAGTG+TGG | 0.492649 | 7.1:-4343366 | None:intergenic |
AATAATGCATTGGTTTCGGA+TGG | 0.512362 | 7.1:+4341289 | MS.gene050835:CDS |
ATTGGTTTCGGATGGAAAGC+AGG | 0.513871 | 7.1:+4341297 | MS.gene050835:CDS |
ATACACACCTGACCATGGTC+TGG | 0.520004 | 7.1:-4339320 | None:intergenic |
TGCAAGATCAGAAGCTCCCC+TGG | 0.525707 | 7.1:+4341426 | MS.gene050835:CDS |
GCTATGGCAGTTGCAGCTGG+TGG | 0.526091 | 7.1:-4343382 | None:intergenic |
CATGGCAGCATCATCAAAGA+AGG | 0.547257 | 7.1:+4338834 | MS.gene050835:CDS |
TTCTAACTTGGATGAGTGTG+AGG | 0.554307 | 7.1:-4341353 | None:intergenic |
CTATGGCAGTTGCAGCTGGT+GGG | 0.556898 | 7.1:-4343381 | None:intergenic |
TGCCGATATTGTGTTTGCTA+TGG | 0.556910 | 7.1:-4343398 | None:intergenic |
AGCCATAGTGCAACGATAGT+AGG | 0.563933 | 7.1:-4341772 | None:intergenic |
TGAACAACTGAGCTTGTAGT+TGG | 0.569201 | 7.1:-4339277 | None:intergenic |
ACGAGGACAAGGGTTACCCT+TGG | 0.579166 | 7.1:-4341748 | None:intergenic |
TCTGCAGGATGATCAGGAGG+AGG | 0.584649 | 7.1:-4341325 | None:intergenic |
GAAAGGAATTAGGTCTTGCG+TGG | 0.585330 | 7.1:-4341380 | None:intergenic |
GAGTGTGAGGAATCTTCTGC+AGG | 0.593547 | 7.1:-4341340 | None:intergenic |
AGAATGTGGAAGAAAATCAT+GGG | 0.597126 | 7.1:+4341239 | MS.gene050835:intron |
TATCGTTGCACTATGGCTGT+AGG | 0.598056 | 7.1:+4341777 | MS.gene050835:CDS |
TGTGGAAGAAAATCATGGGA+TGG | 0.610182 | 7.1:+4341243 | MS.gene050835:CDS |
AAAGGAATTAGGTCTTGCGT+GGG | 0.624304 | 7.1:-4341379 | None:intergenic |
TGCTGAGTGAGGAGTAGTGT+TGG | 0.633875 | 7.1:-4338861 | None:intergenic |
CTGCAGGATGATCAGGAGGA+GGG | 0.634928 | 7.1:-4341324 | None:intergenic |
TCTTGCACGTATGGAAACCC+TGG | 0.642973 | 7.1:-4341410 | None:intergenic |
TAACAGGATCATGCTGAGTG+AGG | 0.647028 | 7.1:-4338872 | None:intergenic |
TGCTTGAAAGTGAATTGAGG+AGG | 0.651482 | 7.1:+4339195 | MS.gene050835:CDS |
TCTTCTGCAGGATGATCAGG+AGG | 0.653590 | 7.1:-4341328 | None:intergenic |
CAAACATACACACCTGACCA+TGG | 0.657184 | 7.1:-4339325 | None:intergenic |
AGATCAGCGATGGATGTCAG+TGG | 0.669830 | 7.1:+4341703 | MS.gene050835:intron |
GATAGTAGGCACGAGGACAA+GGG | 0.677877 | 7.1:-4341758 | None:intergenic |
TCAGCGATGGATGTCAGTGG+AGG | 0.680116 | 7.1:+4341706 | MS.gene050835:CDS |
GTATGCTTGAAAGTGAATTG+AGG | 0.687225 | 7.1:+4339192 | MS.gene050835:CDS |
ATACTAATAACAACATACGA+AGG | 0.689011 | 7.1:+4343340 | MS.gene050835:CDS |
GCTTGAAAGTGAATTGAGGA+GGG | 0.713652 | 7.1:+4339196 | MS.gene050835:CDS |
GAAGATGATCAAGATCAACA+TGG | 0.728705 | 7.1:+4338816 | MS.gene050835:CDS |
GTGCAACGATAGTAGGCACG+AGG | 0.731065 | 7.1:-4341765 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTTATTAATTTTTTTTA+GGG | + | chr7.1:4339665-4339684 | MS.gene050835:intron | 0.0% |
!! | GTTATATTTATATATATACT+TGG | + | chr7.1:4341530-4341549 | MS.gene050835:intron | 10.0% |
!! | TTTACTAGTATATATATATT+AGG | - | chr7.1:4343272-4343291 | None:intergenic | 10.0% |
!!! | AAATTAAGAAAGTTAAATTT+TGG | - | chr7.1:4339100-4339119 | None:intergenic | 10.0% |
!!! | AATATGAATTTTTATGTTTT+TGG | + | chr7.1:4342667-4342686 | MS.gene050835:intron | 10.0% |
!!! | AATTAAGATAATATCTTTTA+GGG | - | chr7.1:4342914-4342933 | None:intergenic | 10.0% |
!!! | AATTTTATTGAAAAATATGA+AGG | - | chr7.1:4342575-4342594 | None:intergenic | 10.0% |
!!! | ACTTTTATTTAAAAAATTGA+CGG | - | chr7.1:4340128-4340147 | None:intergenic | 10.0% |
!!! | CTAATTAACTTTTTTTTTTA+AGG | - | chr7.1:4340363-4340382 | None:intergenic | 10.0% |
!!! | TATATAAGAAAATATTTTCT+TGG | + | chr7.1:4339773-4339792 | MS.gene050835:intron | 10.0% |
!!! | TCAAATATATATTTTTCTTT+GGG | + | chr7.1:4339711-4339730 | MS.gene050835:intron | 10.0% |
!!! | TTCAAATATATATTTTTCTT+TGG | + | chr7.1:4339710-4339729 | MS.gene050835:intron | 10.0% |
!!! | TTTTTTTTTATGTTTTGAAA+TGG | + | chr7.1:4342160-4342179 | MS.gene050835:intron | 10.0% |
!! | ACAATAGATAAAATATTGTA+GGG | - | chr7.1:4340701-4340720 | None:intergenic | 15.0% |
!! | ACTATCTTTAATAAAATGTT+GGG | - | chr7.1:4339942-4339961 | None:intergenic | 15.0% |
!! | ATAAAACAACTAGATATATA+AGG | + | chr7.1:4340041-4340060 | MS.gene050835:intron | 15.0% |
!! | ATATAAATATAACTGTACAA+TGG | - | chr7.1:4341523-4341542 | None:intergenic | 15.0% |
!! | ATTAATTAATATATAGTACC+AGG | - | chr7.1:4341447-4341466 | None:intergenic | 15.0% |
!! | ATTACTCTTTATAAAAGATA+GGG | + | chr7.1:4342415-4342434 | MS.gene050835:intron | 15.0% |
!! | GAAAATTAATAATCAAATGT+TGG | - | chr7.1:4339367-4339386 | None:intergenic | 15.0% |
!! | TACAATAGATAAAATATTGT+AGG | - | chr7.1:4340702-4340721 | None:intergenic | 15.0% |
!! | TACTATCTTTAATAAAATGT+TGG | - | chr7.1:4339943-4339962 | None:intergenic | 15.0% |
!! | TATTACTCTTTATAAAAGAT+AGG | + | chr7.1:4342414-4342433 | MS.gene050835:intron | 15.0% |
!! | TTAATTAATATATAGTACCA+GGG | - | chr7.1:4341446-4341465 | None:intergenic | 15.0% |
!!! | AAATTGTTTTTACATTGTTT+TGG | - | chr7.1:4340163-4340182 | None:intergenic | 15.0% |
!!! | ATTTTACCATAAATGATATT+GGG | + | chr7.1:4341937-4341956 | MS.gene050835:intron | 15.0% |
!!! | CTTTTATTTAAAAAATTGAC+GGG | - | chr7.1:4340127-4340146 | None:intergenic | 15.0% |
!!! | GAATTAAGATAATATCTTTT+AGG | - | chr7.1:4342915-4342934 | None:intergenic | 15.0% |
!!! | GGATATACATATTTTATATA+GGG | - | chr7.1:4342004-4342023 | None:intergenic | 15.0% |
!!! | TAAAAAACAGTTTCTTTTTA+AGG | + | chr7.1:4340856-4340875 | MS.gene050835:intron | 15.0% |
!!! | TAATTAAAGATCATATTTTC+AGG | + | chr7.1:4340182-4340201 | MS.gene050835:intron | 15.0% |
!!! | TAATTAGTGTAATTTAAAGT+AGG | + | chr7.1:4341063-4341082 | MS.gene050835:intron | 15.0% |
!!! | TAATTTTAAGAGATTATTTG+TGG | + | chr7.1:4342032-4342051 | MS.gene050835:intron | 15.0% |
!!! | TACTCGTTAATTATATATTT+TGG | - | chr7.1:4340211-4340230 | None:intergenic | 15.0% |
!!! | TATATTTTACTAAAATTCAG+AGG | - | chr7.1:4341910-4341929 | None:intergenic | 15.0% |
!!! | TATGTTTAAAATAATACAGT+CGG | + | chr7.1:4340017-4340036 | MS.gene050835:intron | 15.0% |
!!! | TATTTTAAACATATTATAGG+CGG | - | chr7.1:4340010-4340029 | None:intergenic | 15.0% |
!!! | TCTAATATAAAACTTTAAGA+TGG | - | chr7.1:4342351-4342370 | None:intergenic | 15.0% |
!!! | TTTGAAGAACATATATATTT+TGG | + | chr7.1:4339124-4339143 | MS.gene050835:intron | 15.0% |
!!! | TTTTTTGAATAATAATGCAT+TGG | + | chr7.1:4341279-4341298 | MS.gene050835:CDS | 15.0% |
!! | AAAATATGTATATCCCAATT+TGG | + | chr7.1:4342009-4342028 | MS.gene050835:intron | 20.0% |
!! | AAAATTAGTGAAATGTTAAC+CGG | + | chr7.1:4340520-4340539 | MS.gene050835:intron | 20.0% |
!! | AATAAAATGGAAATACTAGA+AGG | - | chr7.1:4340940-4340959 | None:intergenic | 20.0% |
!! | AATCAAATGTTGGTATATTT+AGG | - | chr7.1:4342460-4342479 | None:intergenic | 20.0% |
!! | ACTAGAAAGAAAAAAAATTG+AGG | - | chr7.1:4339876-4339895 | None:intergenic | 20.0% |
!! | ATAAAATGGAAATACTAGAA+GGG | - | chr7.1:4340939-4340958 | None:intergenic | 20.0% |
!! | ATCAAATGTTGGTATATTTA+GGG | - | chr7.1:4342459-4342478 | None:intergenic | 20.0% |
!! | ATCTATTCATTTCATTTCTT+TGG | + | chr7.1:4339601-4339620 | MS.gene050835:intron | 20.0% |
!! | ATCTCTTAAAATTACCAAAT+TGG | - | chr7.1:4342026-4342045 | None:intergenic | 20.0% |
!! | CAATATCATTTATGGTAAAA+TGG | - | chr7.1:4341938-4341957 | None:intergenic | 20.0% |
!! | CATTTAATAGTTATGAACAA+AGG | + | chr7.1:4341201-4341220 | MS.gene050835:intron | 20.0% |
!! | CTAGAAAGAAAAAAAATTGA+GGG | - | chr7.1:4339875-4339894 | None:intergenic | 20.0% |
!! | TAATTAATATATAGTACCAG+GGG | - | chr7.1:4341445-4341464 | None:intergenic | 20.0% |
!! | TCTCTTAAAATTACCAAATT+GGG | - | chr7.1:4342025-4342044 | None:intergenic | 20.0% |
!!! | AATAATGATTTGTTTGTTTC+TGG | + | chr7.1:4339446-4339465 | MS.gene050835:intron | 20.0% |
!!! | ATTTATATATATACTTGGTG+AGG | + | chr7.1:4341535-4341554 | MS.gene050835:intron | 20.0% |
!!! | ATTTTAAACATATTATAGGC+GGG | - | chr7.1:4340009-4340028 | None:intergenic | 20.0% |
!!! | CAATAAAATTTTCCAGAAAA+AGG | + | chr7.1:4342585-4342604 | MS.gene050835:intron | 20.0% |
!!! | CATTTTACCATAAATGATAT+TGG | + | chr7.1:4341936-4341955 | MS.gene050835:intron | 20.0% |
!!! | GGGATATACATATTTTATAT+AGG | - | chr7.1:4342005-4342024 | None:intergenic | 20.0% |
!!! | TAATTCTTTTATGTGAAACT+TGG | + | chr7.1:4342929-4342948 | MS.gene050835:intron | 20.0% |
!!! | TATTGTCATTTCTAGTTTAA+AGG | - | chr7.1:4339973-4339992 | None:intergenic | 20.0% |
!!! | TCATAGATAGAAAATTTTAG+AGG | - | chr7.1:4342517-4342536 | None:intergenic | 20.0% |
!!! | TCTTCTTTGTTGTTTTTATT+AGG | - | chr7.1:4338801-4338820 | None:intergenic | 20.0% |
!!! | TTCTTATTTAGTTGTTTTGT+TGG | - | chr7.1:4340296-4340315 | None:intergenic | 20.0% |
!!! | TTTAGGGTTAAATATGTAAA+TGG | - | chr7.1:4342898-4342917 | None:intergenic | 20.0% |
! | ACATGAATTGACTAAAAACT+AGG | + | chr7.1:4342808-4342827 | MS.gene050835:intron | 25.0% |
! | ACTGGTTAAACATACTAAAA+AGG | + | chr7.1:4340782-4340801 | MS.gene050835:intron | 25.0% |
! | AGTCATCAATAAAGAAAACA+AGG | + | chr7.1:4339514-4339533 | MS.gene050835:intron | 25.0% |
! | ATACTAATAACAACATACGA+AGG | + | chr7.1:4343340-4343359 | MS.gene050835:CDS | 25.0% |
! | ATATTTCCCATACTAGAATA+TGG | - | chr7.1:4340745-4340764 | None:intergenic | 25.0% |
! | ATGAACAAAGGTAATATTTG+TGG | + | chr7.1:4341213-4341232 | MS.gene050835:intron | 25.0% |
! | CATGAATTGACTAAAAACTA+GGG | + | chr7.1:4342809-4342828 | MS.gene050835:intron | 25.0% |
! | GATAGGGTTAAATAAGTAAA+TGG | + | chr7.1:4342431-4342450 | MS.gene050835:intron | 25.0% |
! | GTCATCAATAAAGAAAACAA+GGG | + | chr7.1:4339515-4339534 | MS.gene050835:intron | 25.0% |
! | TATTCTCCATATTCTAGTAT+GGG | + | chr7.1:4340736-4340755 | MS.gene050835:intron | 25.0% |
! | TCAAATGTTGGTATATTTAG+GGG | - | chr7.1:4342458-4342477 | None:intergenic | 25.0% |
! | TTATTAATTGAGTTCTGCAA+TGG | + | chr7.1:4342183-4342202 | MS.gene050835:intron | 25.0% |
! | TTTCTTCAAAAGACTGAATA+GGG | + | chr7.1:4342087-4342106 | MS.gene050835:intron | 25.0% |
!! | ATTTAAAACGTTACGTTAAC+AGG | - | chr7.1:4338891-4338910 | None:intergenic | 25.0% |
!! | ATTTTTATCTATTGAGCTTG+TGG | + | chr7.1:4342952-4342971 | MS.gene050835:intron | 25.0% |
!! | CATAATATTCTACCTTTTTC+TGG | - | chr7.1:4342600-4342619 | None:intergenic | 25.0% |
!! | TGTCTCATTTTATAGTAGTT+CGG | + | chr7.1:4340079-4340098 | MS.gene050835:intron | 25.0% |
!! | TTTTAAACATATTATAGGCG+GGG | - | chr7.1:4340008-4340027 | None:intergenic | 25.0% |
!! | TTTTCTTCAAAAGACTGAAT+AGG | + | chr7.1:4342086-4342105 | MS.gene050835:intron | 25.0% |
!!! | AAGCCTAAGAAATATTTTAG+TGG | - | chr7.1:4342489-4342508 | None:intergenic | 25.0% |
!!! | AGCCTAAGAAATATTTTAGT+GGG | - | chr7.1:4342488-4342507 | None:intergenic | 25.0% |
!!! | AGGCGGTTTTTAATTTTAAA+AGG | - | chr7.1:4340989-4341008 | None:intergenic | 25.0% |
!!! | CATGAATGGAAATTTTTAGA+GGG | + | chr7.1:4342840-4342859 | MS.gene050835:intron | 25.0% |
!!! | GAATAATAATGCATTGGTTT+CGG | + | chr7.1:4341285-4341304 | MS.gene050835:CDS | 25.0% |
!!! | TAATTTGTTTTCATACAGAC+TGG | + | chr7.1:4338987-4339006 | MS.gene050835:intron | 25.0% |
!!! | TATAGATCGTTTTGTTGAAA+AGG | - | chr7.1:4341032-4341051 | None:intergenic | 25.0% |
!!! | TCATGAATGGAAATTTTTAG+AGG | + | chr7.1:4342839-4342858 | MS.gene050835:intron | 25.0% |
AATATTTGTGGAACAGAATG+TGG | + | chr7.1:4341225-4341244 | MS.gene050835:intron | 30.0% | |
AATTCCTTTCAAAAAAGCCA+GGG | + | chr7.1:4341393-4341412 | MS.gene050835:CDS | 30.0% | |
AGAATGTGGAAGAAAATCAT+GGG | + | chr7.1:4341239-4341258 | MS.gene050835:intron | 30.0% | |
CAAGGTTTCTAATTTAAGTG+AGG | - | chr7.1:4339548-4339567 | None:intergenic | 30.0% | |
CTAGTATGGGAAATATTAAC+CGG | + | chr7.1:4340749-4340768 | MS.gene050835:intron | 30.0% | |
CTATTCTCCATATTCTAGTA+TGG | + | chr7.1:4340735-4340754 | MS.gene050835:intron | 30.0% | |
CTCACTTAAATTAGAAACCT+TGG | + | chr7.1:4339546-4339565 | MS.gene050835:intron | 30.0% | |
CTGGTTAAGCATAACAAAAA+AGG | - | chr7.1:4340891-4340910 | None:intergenic | 30.0% | |
CTTTACAAAACCATTTCGTA+AGG | + | chr7.1:4342381-4342400 | MS.gene050835:intron | 30.0% | |
GAGGAAATATGGACAAAAAA+TGG | + | chr7.1:4341725-4341744 | MS.gene050835:CDS | 30.0% | |
GAGGGACTAAAATAAAATGT+TGG | + | chr7.1:4342858-4342877 | MS.gene050835:intron | 30.0% | |
GTCCCACTAAAATATTTCTT+AGG | + | chr7.1:4342483-4342502 | MS.gene050835:intron | 30.0% | |
TAATTCCTTTCAAAAAAGCC+AGG | + | chr7.1:4341392-4341411 | MS.gene050835:CDS | 30.0% | |
TATACATATATTGCAACACG+TGG | + | chr7.1:4343217-4343236 | MS.gene050835:intron | 30.0% | |
! | ACACTAGTTAACGCTTTTAA+AGG | + | chr7.1:4340552-4340571 | MS.gene050835:intron | 30.0% |
! | ATTTAGCTCAATTAGTGAGT+CGG | - | chr7.1:4343148-4343167 | None:intergenic | 30.0% |
! | CACTAGTTAACGCTTTTAAA+GGG | + | chr7.1:4340553-4340572 | MS.gene050835:intron | 30.0% |
! | GCTTATTCAAGATTTTGTTG+CGG | - | chr7.1:4340274-4340293 | None:intergenic | 30.0% |
! | TATATCTCACGATTTTACGT+GGG | - | chr7.1:4343201-4343220 | None:intergenic | 30.0% |
!! | GAAAGTTAAATTTTGGTCCA+TGG | - | chr7.1:4339093-4339112 | None:intergenic | 30.0% |
!! | TCTTGAAAATTCTGAAACTG+AGG | + | chr7.1:4339055-4339074 | MS.gene050835:CDS | 30.0% |
!! | TGTCATTTCTAGTTTAAAGG+TGG | - | chr7.1:4339970-4339989 | None:intergenic | 30.0% |
!!! | GTTTTTTGAAGAGCTAATTG+TGG | + | chr7.1:4341581-4341600 | MS.gene050835:intron | 30.0% |
!!! | TGGCTTTTTTGAAAGGAATT+AGG | - | chr7.1:4341393-4341412 | None:intergenic | 30.0% |
AATATGCACCAGAATAGCTT+AGG | - | chr7.1:4341561-4341580 | None:intergenic | 35.0% | |
AATGATATTGGGTCTACCTT+TGG | + | chr7.1:4341948-4341967 | MS.gene050835:intron | 35.0% | |
AATTTCCACATTCATGCATG+TGG | - | chr7.1:4341631-4341650 | None:intergenic | 35.0% | |
ACGTTTCTTGACTATACTAG+TGG | - | chr7.1:4339633-4339652 | None:intergenic | 35.0% | |
AGTTTGAAAAAAGACAGCCA+AGG | - | chr7.1:4339566-4339585 | None:intergenic | 35.0% | |
ATATATTGCAACACGTGGAT+CGG | + | chr7.1:4343222-4343241 | MS.gene050835:intron | 35.0% | |
ATATGGACAAAAAATGGCCA+AGG | + | chr7.1:4341731-4341750 | MS.gene050835:CDS | 35.0% | |
ATCTCGTAAGAATTGTCCAA+AGG | - | chr7.1:4341967-4341986 | None:intergenic | 35.0% | |
ATTTGACTCATAGAGTTGAG+AGG | - | chr7.1:4340461-4340480 | None:intergenic | 35.0% | |
CAGAATGTGGAAGAAAATCA+TGG | + | chr7.1:4341238-4341257 | MS.gene050835:intron | 35.0% | |
CTAGGGACTAATTTCATGAA+TGG | + | chr7.1:4342826-4342845 | MS.gene050835:intron | 35.0% | |
GAAGATGATCAAGATCAACA+TGG | + | chr7.1:4338816-4338835 | MS.gene050835:CDS | 35.0% | |
GGTAGACCCAATATCATTTA+TGG | - | chr7.1:4341946-4341965 | None:intergenic | 35.0% | |
GTATGCTTGAAAGTGAATTG+AGG | + | chr7.1:4339192-4339211 | MS.gene050835:CDS | 35.0% | |
GTGGGACTAAAATCAAATGT+TGG | - | chr7.1:4342470-4342489 | None:intergenic | 35.0% | |
TATGAAGGTTAGACATGAGT+TGG | - | chr7.1:4342560-4342579 | None:intergenic | 35.0% | |
TATGGACAAAAAATGGCCAA+GGG | + | chr7.1:4341732-4341751 | MS.gene050835:CDS | 35.0% | |
TGCCATAGCAAACACAATAT+CGG | + | chr7.1:4343396-4343415 | MS.gene050835:CDS | 35.0% | |
TGTGGATATAAACGGTATGT+AGG | + | chr7.1:4342305-4342324 | MS.gene050835:intron | 35.0% | |
TGTTGGTGTGTGGATATAAA+CGG | + | chr7.1:4342297-4342316 | MS.gene050835:intron | 35.0% | |
TTATTACCTGTTTGCGAACT+GGG | - | chr7.1:4341806-4341825 | None:intergenic | 35.0% | |
TTTATTACCTGTTTGCGAAC+TGG | - | chr7.1:4341807-4341826 | None:intergenic | 35.0% | |
! | GTATATCTCACGATTTTACG+TGG | - | chr7.1:4343202-4343221 | None:intergenic | 35.0% |
! | TATAGTAGTTCGGTTCGAAT+CGG | + | chr7.1:4340089-4340108 | MS.gene050835:intron | 35.0% |
! | TGATGATTTTAGATCAGCGA+TGG | + | chr7.1:4341693-4341712 | MS.gene050835:intron | 35.0% |
! | TTGTAGTTGGCTATAGCTTT+TGG | - | chr7.1:4339267-4339286 | None:intergenic | 35.0% |
!! | AAATGTTGGGTCTTGTTAAC+CGG | - | chr7.1:4339929-4339948 | None:intergenic | 35.0% |
!! | AACATAGTGATGGATTTGAG+GGG | - | chr7.1:4342281-4342300 | None:intergenic | 35.0% |
!! | AATAATGCATTGGTTTCGGA+TGG | + | chr7.1:4341289-4341308 | MS.gene050835:CDS | 35.0% |
!! | CAACATAGTGATGGATTTGA+GGG | - | chr7.1:4342282-4342301 | None:intergenic | 35.0% |
!! | TAAAAGCGTTAACTAGTGTC+CGG | - | chr7.1:4340551-4340570 | None:intergenic | 35.0% |
!! | TTTTGAAGAGCTAATTGTGG+TGG | + | chr7.1:4341584-4341603 | MS.gene050835:intron | 35.0% |
AAACATATTATAGGCGGGGT+AGG | - | chr7.1:4340004-4340023 | None:intergenic | 40.0% | |
AAAGGAATTAGGTCTTGCGT+GGG | - | chr7.1:4341382-4341401 | None:intergenic | 40.0% | |
AACCATTTCGTAAGGTAGTG+AGG | + | chr7.1:4342389-4342408 | MS.gene050835:intron | 40.0% | |
CAGAAACAAAAACCAGACCA+TGG | + | chr7.1:4339308-4339327 | MS.gene050835:CDS | 40.0% | |
CATAATTTGAGCTGTGAAGG+CGG | - | chr7.1:4341006-4341025 | None:intergenic | 40.0% | |
CCAAGTTTCACATAGTGAGT+CGG | - | chr7.1:4343040-4343059 | None:intergenic | 40.0% | |
CCTCAAATCCATCACTATGT+TGG | + | chr7.1:4342280-4342299 | MS.gene050835:intron | 40.0% | |
GCTTGAAAGTGAATTGAGGA+GGG | + | chr7.1:4339196-4339215 | MS.gene050835:CDS | 40.0% | |
TAGTATGTTTAACCAGTGCC+CGG | - | chr7.1:4340779-4340798 | None:intergenic | 40.0% | |
TAGTTCCTTAACTAGTGCTC+CGG | + | chr7.1:4339898-4339917 | MS.gene050835:intron | 40.0% | |
TGAACAACTGAGCTTGTAGT+TGG | - | chr7.1:4339280-4339299 | None:intergenic | 40.0% | |
TGAGGTTTGTGTATGTACCA+TGG | + | chr7.1:4339073-4339092 | MS.gene050835:intron | 40.0% | |
TGCCATAATTTGAGCTGTGA+AGG | - | chr7.1:4341009-4341028 | None:intergenic | 40.0% | |
TGCTTGAAAGTGAATTGAGG+AGG | + | chr7.1:4339195-4339214 | MS.gene050835:CDS | 40.0% | |
TGTGGAAGAAAATCATGGGA+TGG | + | chr7.1:4341243-4341262 | MS.gene050835:CDS | 40.0% | |
TGTTATGCTTAACCAGTGTC+CGG | + | chr7.1:4340895-4340914 | MS.gene050835:intron | 40.0% | |
TTCCTCACTACCTTACGAAA+TGG | - | chr7.1:4342394-4342413 | None:intergenic | 40.0% | |
TTCTAACTTGGATGAGTGTG+AGG | - | chr7.1:4341356-4341375 | None:intergenic | 40.0% | |
! | ATGTGCACTGTTTCTTGAAC+AGG | + | chr7.1:4343291-4343310 | MS.gene050835:intron | 40.0% |
! | TGCCGATATTGTGTTTGCTA+TGG | - | chr7.1:4343401-4343420 | None:intergenic | 40.0% |
! | TGGTGGATATATAGCTAGCT+AGG | + | chr7.1:4341601-4341620 | MS.gene050835:intron | 40.0% |
!! | AAAAGCGTTAACTAGTGTCC+GGG | - | chr7.1:4340550-4340569 | None:intergenic | 40.0% |
!! | AATTCTTAAAAGAGTGCCCC+GGG | + | chr7.1:4340658-4340677 | MS.gene050835:intron | 40.0% |
!! | CCAACATAGTGATGGATTTG+AGG | - | chr7.1:4342283-4342302 | None:intergenic | 40.0% |
!! | GAATTCTTAAAAGAGTGCCC+CGG | + | chr7.1:4340657-4340676 | MS.gene050835:intron | 40.0% |
!!! | GAAACCCTGGCTTTTTTGAA+AGG | - | chr7.1:4341400-4341419 | None:intergenic | 40.0% |
AATGTTAACCAGTACCCTCG+AGG | + | chr7.1:4339735-4339754 | MS.gene050835:intron | 45.0% | |
ACAAAAACCAGACCATGGTC+AGG | + | chr7.1:4339313-4339332 | MS.gene050835:CDS | 45.0% | |
ACTAGAAGGGTGATGCTAAC+CGG | - | chr7.1:4340926-4340945 | None:intergenic | 45.0% | |
AGCCATAGTGCAACGATAGT+AGG | - | chr7.1:4341775-4341794 | None:intergenic | 45.0% | |
AGCTTCTGATCTTGCACGTA+TGG | - | chr7.1:4341422-4341441 | None:intergenic | 45.0% | |
AGTATGTTTAACCAGTGCCC+GGG | - | chr7.1:4340778-4340797 | None:intergenic | 45.0% | |
AGTTCCTTAACTAGTGCTCC+GGG | + | chr7.1:4339899-4339918 | MS.gene050835:intron | 45.0% | |
CAAACATACACACCTGACCA+TGG | - | chr7.1:4339328-4339347 | None:intergenic | 45.0% | |
CATGGCAGCATCATCAAAGA+AGG | + | chr7.1:4338834-4338853 | MS.gene050835:CDS | 45.0% | |
CCGACTCACTATGTGAAACT+TGG | + | chr7.1:4343037-4343056 | MS.gene050835:intron | 45.0% | |
CGCCTTCACAGCTCAAATTA+TGG | + | chr7.1:4341004-4341023 | MS.gene050835:intron | 45.0% | |
GAAAGGAATTAGGTCTTGCG+TGG | - | chr7.1:4341383-4341402 | None:intergenic | 45.0% | |
GAATCTTCTGCAGGATGATC+AGG | - | chr7.1:4341334-4341353 | None:intergenic | 45.0% | |
GGATATATAGCTAGCTAGGC+CGG | + | chr7.1:4341605-4341624 | MS.gene050835:intron | 45.0% | |
GGATGTCAGTGGAGGAAATA+TGG | + | chr7.1:4341714-4341733 | MS.gene050835:CDS | 45.0% | |
GTTATGCTTAACCAGTGTCC+GGG | + | chr7.1:4340896-4340915 | MS.gene050835:intron | 45.0% | |
TAACAGGATCATGCTGAGTG+AGG | - | chr7.1:4338875-4338894 | None:intergenic | 45.0% | |
TATCGTTGCACTATGGCTGT+AGG | + | chr7.1:4341777-4341796 | MS.gene050835:CDS | 45.0% | |
TCCACACACCAACATAGTGA+TGG | - | chr7.1:4342291-4342310 | None:intergenic | 45.0% | |
TCCATCACTATGTTGGTGTG+TGG | + | chr7.1:4342287-4342306 | MS.gene050835:intron | 45.0% | |
TGCCTACTATCGTTGCACTA+TGG | + | chr7.1:4341770-4341789 | MS.gene050835:CDS | 45.0% | |
TGGCATCAGAGCCTATCAAT+CGG | - | chr7.1:4342331-4342350 | None:intergenic | 45.0% | |
TTATGCTTAACCAGTGTCCG+GGG | + | chr7.1:4340897-4340916 | MS.gene050835:intron | 45.0% | |
TTGCGTGGGTTCTTCTAACT+TGG | - | chr7.1:4341368-4341387 | None:intergenic | 45.0% | |
! | AAAGCGTTAACTAGTGTCCG+GGG | - | chr7.1:4340549-4340568 | None:intergenic | 45.0% |
! | ATTGGTTTCGGATGGAAAGC+AGG | + | chr7.1:4341297-4341316 | MS.gene050835:CDS | 45.0% |
! | TAGTTCGGTTCGAATCGGTT+CGG | + | chr7.1:4340094-4340113 | MS.gene050835:intron | 45.0% |
!! | ATTCTTAAAAGAGTGCCCCG+GGG | + | chr7.1:4340659-4340678 | MS.gene050835:intron | 45.0% |
!!! | ACTTTTAATAAAAAATAAAA+TGG | - | chr7.1:4340953-4340972 | None:intergenic | 5.0% |
!!! | CATTTTTATTAATTTTTTTT+AGG | + | chr7.1:4339664-4339683 | MS.gene050835:intron | 5.0% |
!!! | TAAAAAATTCTAATTTTTTT+TGG | - | chr7.1:4342742-4342723 | None:intergenic | 5.0% |
!!! | TACATATTTAATTTATATTT+TGG | + | chr7.1:4338921-4338940 | MS.gene050835:intron | 5.0% |
!!! | TATAAAATAATTTTTTCTTT+TGG | + | chr7.1:4340635-4340654 | MS.gene050835:intron | 5.0% |
!!! | TATTATTTTAAACATATTAT+AGG | - | chr7.1:4340013-4340032 | None:intergenic | 5.0% |
!!! | TTTTTATTAATTTTTTTTAG+GGG | + | chr7.1:4339666-4339685 | MS.gene050835:intron | 5.0% |
AGATCAGCGATGGATGTCAG+TGG | + | chr7.1:4341703-4341722 | MS.gene050835:intron | 50.0% | |
ATACACACCTGACCATGGTC+TGG | - | chr7.1:4339323-4339342 | None:intergenic | 50.0% | |
ATTCCTTAACCAGTGCCTCG+AGG | - | chr7.1:4339753-4339772 | None:intergenic | 50.0% | |
CGGTATGTAGGCCGATTGAT+AGG | + | chr7.1:4342317-4342336 | MS.gene050835:intron | 50.0% | |
GAAATATTAACCGGTGCCCC+GGG | + | chr7.1:4340758-4340777 | MS.gene050835:intron | 50.0% | |
GAAATGTTAACCGGTGTCCC+CGG | + | chr7.1:4340529-4340548 | MS.gene050835:intron | 50.0% | |
GAGTGTGAGGAATCTTCTGC+AGG | - | chr7.1:4341343-4341362 | None:intergenic | 50.0% | |
GATAGTAGGCACGAGGACAA+GGG | - | chr7.1:4341761-4341780 | None:intergenic | 50.0% | |
GGAAATATTAACCGGTGCCC+CGG | + | chr7.1:4340757-4340776 | MS.gene050835:intron | 50.0% | |
GTATGTTTAACCAGTGCCCG+GGG | - | chr7.1:4340777-4340796 | None:intergenic | 50.0% | |
GTTCCTTAACTAGTGCTCCG+GGG | + | chr7.1:4339900-4339919 | MS.gene050835:intron | 50.0% | |
TATGCTTAACCAGTGTCCGG+GGG | + | chr7.1:4340898-4340917 | MS.gene050835:intron | 50.0% | |
TCCACATTCATGCATGTGGC+CGG | - | chr7.1:4341627-4341646 | None:intergenic | 50.0% | |
TCTTCTGCAGGATGATCAGG+AGG | - | chr7.1:4341331-4341350 | None:intergenic | 50.0% | |
TCTTGCACGTATGGAAACCC+TGG | - | chr7.1:4341413-4341432 | None:intergenic | 50.0% | |
TGCTGAGTGAGGAGTAGTGT+TGG | - | chr7.1:4338864-4338883 | None:intergenic | 50.0% | |
TGGTGAGGCCTAAGCTATTC+TGG | + | chr7.1:4341550-4341569 | MS.gene050835:intron | 50.0% | |
TTCCTTAACCAGTGCCTCGA+GGG | - | chr7.1:4339752-4339771 | None:intergenic | 50.0% | |
TTCCTTAACTAGTGCTCCGG+GGG | + | chr7.1:4339901-4339920 | MS.gene050835:intron | 50.0% | |
! | TTTGCTATGGCAGTTGCAGC+TGG | - | chr7.1:4343388-4343407 | None:intergenic | 50.0% |
!! | TTCTTAAAAGAGTGCCCCGG+GGG | + | chr7.1:4340660-4340679 | MS.gene050835:intron | 50.0% |
ACGAGGACAAGGGTTACCCT+TGG | - | chr7.1:4341751-4341770 | None:intergenic | 55.0% | |
AGGATGCCCAGTTCGCAAAC+AGG | + | chr7.1:4341797-4341816 | MS.gene050835:CDS | 55.0% | |
CGATAGTAGGCACGAGGACA+AGG | - | chr7.1:4341762-4341781 | None:intergenic | 55.0% | |
CTATGGCAGTTGCAGCTGGT+GGG | - | chr7.1:4343384-4343403 | None:intergenic | 55.0% | |
CTGCAGGATGATCAGGAGGA+GGG | - | chr7.1:4341327-4341346 | None:intergenic | 55.0% | |
GTGCAACGATAGTAGGCACG+AGG | - | chr7.1:4341768-4341787 | None:intergenic | 55.0% | |
TAACTAGTGTCCGGGGACAC+CGG | - | chr7.1:4340542-4340561 | None:intergenic | 55.0% | |
TCAGCGATGGATGTCAGTGG+AGG | + | chr7.1:4341706-4341725 | MS.gene050835:CDS | 55.0% | |
TCTGCAGGATGATCAGGAGG+AGG | - | chr7.1:4341328-4341347 | None:intergenic | 55.0% | |
TCTTGTTAACGAGTGCCCCC+GGG | - | chr7.1:4340678-4340697 | None:intergenic | 55.0% | |
TGCAAGATCAGAAGCTCCCC+TGG | + | chr7.1:4341426-4341445 | MS.gene050835:CDS | 55.0% | |
! | GTCTTGTTAACGAGTGCCCC+CGG | - | chr7.1:4340679-4340698 | None:intergenic | 55.0% |
!! | TACCCTCGAGGCACTGGTTA+AGG | + | chr7.1:4339747-4339766 | MS.gene050835:intron | 55.0% |
AACCAGTACCCTCGAGGCAC+TGG | + | chr7.1:4339741-4339760 | MS.gene050835:intron | 60.0% | |
CAGTTGCAGCTGGTGGGAGT+GGG | - | chr7.1:4343378-4343397 | None:intergenic | 60.0% | |
CTTGTTAACGAGTGCCCCCG+GGG | - | chr7.1:4340677-4340696 | None:intergenic | 60.0% | |
GCCGGCCACATGCATGAATG+TGG | + | chr7.1:4341623-4341642 | MS.gene050835:intron | 60.0% | |
GCTATGGCAGTTGCAGCTGG+TGG | - | chr7.1:4343385-4343404 | None:intergenic | 60.0% | |
! | AACCAGTGCCTCGAGGGTAC+TGG | - | chr7.1:4339746-4339765 | None:intergenic | 60.0% |
! | GTCTTGTTAACCGGTGCCCC+CGG | - | chr7.1:4339920-4339939 | None:intergenic | 60.0% |
! | TGCCCCCGGAGCACTAGTTA+AGG | - | chr7.1:4339906-4339925 | None:intergenic | 60.0% |
CTGGTGGGAGTGGGTGAGTG+TGG | - | chr7.1:4343369-4343388 | None:intergenic | 65.0% | |
GCAGTTGCAGCTGGTGGGAG+TGG | - | chr7.1:4343379-4343398 | None:intergenic | 65.0% | |
GTGATGCTAACCGGTGCCCC+CGG | - | chr7.1:4340917-4340936 | None:intergenic | 65.0% | |
TTAACCAGTGCCCGGGGCAC+CGG | - | chr7.1:4340771-4340790 | None:intergenic | 65.0% | |
! | AACTAGTGCTCCGGGGGCAC+CGG | + | chr7.1:4339907-4339926 | MS.gene050835:intron | 65.0% |
! | TAACCAGTGTCCGGGGGCAC+CGG | + | chr7.1:4340904-4340923 | MS.gene050835:intron | 65.0% |
TAACCGGTGCCCCCGGACAC+TGG | - | chr7.1:4340910-4340929 | None:intergenic | 70.0% | |
TTAACCGGTGCCCCGGGCAC+TGG | + | chr7.1:4340764-4340783 | MS.gene050835:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 4338777 | 4343450 | 4338777 | ID=MS.gene050835 |
chr7.1 | mRNA | 4338777 | 4343450 | 4338777 | ID=MS.gene050835.t1;Parent=MS.gene050835 |
chr7.1 | exon | 4338777 | 4338896 | 4338777 | ID=MS.gene050835.t1.exon1;Parent=MS.gene050835.t1 |
chr7.1 | CDS | 4338777 | 4338896 | 4338777 | ID=cds.MS.gene050835.t1;Parent=MS.gene050835.t1 |
chr7.1 | exon | 4339005 | 4339076 | 4339005 | ID=MS.gene050835.t1.exon2;Parent=MS.gene050835.t1 |
chr7.1 | CDS | 4339005 | 4339076 | 4339005 | ID=cds.MS.gene050835.t1;Parent=MS.gene050835.t1 |
chr7.1 | exon | 4339188 | 4339334 | 4339188 | ID=MS.gene050835.t1.exon3;Parent=MS.gene050835.t1 |
chr7.1 | CDS | 4339188 | 4339334 | 4339188 | ID=cds.MS.gene050835.t1;Parent=MS.gene050835.t1 |
chr7.1 | exon | 4341241 | 4341447 | 4341241 | ID=MS.gene050835.t1.exon4;Parent=MS.gene050835.t1 |
chr7.1 | CDS | 4341241 | 4341447 | 4341241 | ID=cds.MS.gene050835.t1;Parent=MS.gene050835.t1 |
chr7.1 | exon | 4341705 | 4341818 | 4341705 | ID=MS.gene050835.t1.exon5;Parent=MS.gene050835.t1 |
chr7.1 | CDS | 4341705 | 4341818 | 4341705 | ID=cds.MS.gene050835.t1;Parent=MS.gene050835.t1 |
chr7.1 | exon | 4343313 | 4343450 | 4343313 | ID=MS.gene050835.t1.exon6;Parent=MS.gene050835.t1 |
chr7.1 | CDS | 4343313 | 4343450 | 4343313 | ID=cds.MS.gene050835.t1;Parent=MS.gene050835.t1 |
Gene Sequence |
Protein sequence |