Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052374.t1 | XP_003607418.2 | 83.4 | 489 | 10 | 2 | 1 | 424 | 2 | 484 | 2.70E-216 | 761.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052374.t1 | Q9LW77 | 64.1 | 412 | 79 | 4 | 1 | 344 | 2 | 412 | 4.9e-134 | 479.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052374.t1 | A0A072UNL4 | 83.4 | 489 | 10 | 2 | 1 | 424 | 2 | 484 | 1.9e-216 | 761.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052374 | MS.gene065876 | 0.830376 | 3.04E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052374.t1 | MTR_4g077800 | 81.800 | 489 | 18 | 5 | 1 | 424 | 2 | 484 | 0.0 | 783 |
| MS.gene052374.t1 | MTR_4g077800 | 80.573 | 489 | 24 | 5 | 1 | 424 | 2 | 484 | 0.0 | 769 |
| MS.gene052374.t1 | MTR_5g007710 | 63.911 | 496 | 98 | 8 | 1 | 421 | 2 | 491 | 0.0 | 589 |
| MS.gene052374.t1 | MTR_5g007710 | 67.990 | 403 | 62 | 5 | 1 | 338 | 2 | 402 | 0.0 | 538 |
| MS.gene052374.t1 | MTR_4g077703 | 94.937 | 79 | 4 | 0 | 346 | 424 | 25 | 103 | 8.65e-48 | 159 |
| MS.gene052374.t1 | MTR_3g007760 | 35.366 | 164 | 89 | 4 | 141 | 290 | 248 | 408 | 6.58e-19 | 89.4 |
| MS.gene052374.t1 | MTR_3g007760 | 35.366 | 164 | 89 | 4 | 141 | 290 | 225 | 385 | 7.54e-19 | 89.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052374.t1 | AT1G65040 | 65.491 | 397 | 92 | 3 | 1 | 352 | 2 | 398 | 0.0 | 529 |
| MS.gene052374.t1 | AT1G65040 | 59.048 | 420 | 104 | 6 | 1 | 352 | 2 | 421 | 4.28e-167 | 477 |
| MS.gene052374.t1 | AT3G16090 | 60.194 | 412 | 95 | 7 | 1 | 344 | 2 | 412 | 5.71e-164 | 470 |
| MS.gene052374.t1 | AT1G65040 | 55.145 | 379 | 113 | 8 | 1 | 352 | 2 | 350 | 7.99e-132 | 385 |
| MS.gene052374.t1 | AT1G65040 | 62.143 | 280 | 61 | 3 | 118 | 352 | 1 | 280 | 2.66e-117 | 345 |
| MS.gene052374.t1 | AT1G65040 | 71.749 | 223 | 60 | 2 | 133 | 352 | 20 | 242 | 2.91e-114 | 336 |
| MS.gene052374.t1 | AT1G65040 | 75.610 | 205 | 49 | 1 | 133 | 336 | 46 | 250 | 7.58e-113 | 332 |
| MS.gene052374.t1 | AT4G25230 | 34.194 | 155 | 84 | 4 | 121 | 264 | 232 | 379 | 6.85e-20 | 92.4 |
| MS.gene052374.t1 | AT4G25230 | 34.194 | 155 | 84 | 4 | 121 | 264 | 232 | 379 | 6.85e-20 | 92.4 |
| MS.gene052374.t1 | AT4G25230 | 34.194 | 155 | 84 | 4 | 121 | 264 | 232 | 379 | 6.85e-20 | 92.4 |
| MS.gene052374.t1 | AT5G51450 | 33.140 | 172 | 100 | 4 | 141 | 299 | 247 | 416 | 8.36e-17 | 83.2 |
| MS.gene052374.t1 | AT5G51450 | 33.140 | 172 | 100 | 4 | 141 | 299 | 247 | 416 | 8.68e-17 | 83.2 |
| MS.gene052374.t1 | AT5G01960 | 33.333 | 135 | 84 | 4 | 148 | 278 | 285 | 417 | 8.17e-13 | 70.1 |
Find 104 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGTACATGTGCTTCTTTC+TGG | 0.148510 | 4.4:-33140948 | MS.gene052374:CDS |
| GTGTTCCTTTGCACTTAATA+AGG | 0.236769 | 4.4:-33140007 | MS.gene052374:CDS |
| CTATGTCAGTGACATGCTTA+TGG | 0.292617 | 4.4:-33141041 | MS.gene052374:intron |
| ATTTGATTTATCAGAAACTA+TGG | 0.304267 | 4.4:-33140029 | MS.gene052374:intron |
| TCTAATAATGCTGAGCTTGA+TGG | 0.304456 | 4.4:-33137565 | MS.gene052374:CDS |
| GGGAGCTATACGAGACATTT+AGG | 0.314554 | 4.4:-33139986 | MS.gene052374:CDS |
| ACTCACGAATTAAGCTCTTC+AGG | 0.328266 | 4.4:+33139882 | None:intergenic |
| CATGCAGCTCACATTACTTA+TGG | 0.329614 | 4.4:-33137433 | MS.gene052374:CDS |
| GGATTTCTCTATTACATTCC+TGG | 0.340456 | 4.4:-33141704 | MS.gene052374:CDS |
| AGCTCTTCAGGGGTTGCATC+TGG | 0.367949 | 4.4:+33139894 | None:intergenic |
| GCAAGCATGGAGGGAGGTTA+TGG | 0.389288 | 4.4:-33141758 | MS.gene052374:CDS |
| AATGCAATTGTACCTCGTTC+TGG | 0.389760 | 4.4:+33137377 | None:intergenic |
| TGAACCACTGATCTTTGAAC+CGG | 0.391156 | 4.4:+33137592 | None:intergenic |
| AAGAAGCACCAAACTGATCT+TGG | 0.399595 | 4.4:+33141879 | None:intergenic |
| TACATTCCTGGCCATGGTTA+CGG | 0.401139 | 4.4:-33141692 | MS.gene052374:CDS |
| CTGGTTGTCCCATCAGAAAA+TGG | 0.403116 | 4.4:-33139647 | MS.gene052374:CDS |
| TGCAATTACTATCTTTAGAC+AGG | 0.408286 | 4.4:-33141725 | MS.gene052374:CDS |
| AATCAAGGCTTTGCATTGGT+TGG | 0.413236 | 4.4:-33141659 | MS.gene052374:CDS |
| CTCTATTACATTCCTGGCCA+TGG | 0.413794 | 4.4:-33141698 | MS.gene052374:CDS |
| AGACCATTGCCGGATAAAAC+TGG | 0.414204 | 4.4:+33141914 | None:intergenic |
| TGTTCCTTTGCACTTAATAA+GGG | 0.430405 | 4.4:-33140006 | MS.gene052374:CDS |
| AGCAACTTCCAAGATCAGTT+TGG | 0.433214 | 4.4:-33141887 | MS.gene052374:CDS |
| TACGGCACTCTTGTTAATCA+AGG | 0.437977 | 4.4:-33141674 | MS.gene052374:CDS |
| ATGTTCATTGCCTCCGATCA+TGG | 0.438328 | 4.4:-33139706 | MS.gene052374:CDS |
| CTCACGAATTAAGCTCTTCA+GGG | 0.447017 | 4.4:+33139883 | None:intergenic |
| TATGTGGCAGTTAACTAAAA+AGG | 0.449529 | 4.4:-33141827 | MS.gene052374:CDS |
| CATGCTTATGGAGGGGCAAT+GGG | 0.466130 | 4.4:-33141029 | MS.gene052374:CDS |
| GTTGCTAAATAGACCATTGC+CGG | 0.467482 | 4.4:+33141904 | None:intergenic |
| ATTGCTTACCATGCAAAAGT+TGG | 0.470036 | 4.4:+33138302 | None:intergenic |
| CAACCAGTGCTCTGCAGGTA+GGG | 0.482864 | 4.4:+33139663 | None:intergenic |
| TGGGACAACCAGTGCTCTGC+AGG | 0.483896 | 4.4:+33139658 | None:intergenic |
| TCCAAGTAAAACGTGAAGAC+TGG | 0.484698 | 4.4:+33140998 | None:intergenic |
| GGAGAAGAGGATGCATTCAT+TGG | 0.484782 | 4.4:+33137490 | None:intergenic |
| GAAAATGGAACAACTGCTAC+GGG | 0.489223 | 4.4:-33139632 | MS.gene052374:CDS |
| ACATGCTTATGGAGGGGCAA+TGG | 0.490906 | 4.4:-33141030 | MS.gene052374:CDS |
| CTCATTAAGCCTCTCAACCT+CGG | 0.492729 | 4.4:+33141780 | None:intergenic |
| TGTTAATCAAGGCTTTGCAT+TGG | 0.492811 | 4.4:-33141663 | MS.gene052374:CDS |
| TCTTAGTTTAATTGCCACTT+TGG | 0.499449 | 4.4:-33141968 | MS.gene052374:CDS |
| TTATGGAGAGGGATCCCAGC+TGG | 0.501618 | 4.4:-33137416 | MS.gene052374:CDS |
| GCTCAAACTGAGGTTGGCGA+TGG | 0.505128 | 4.4:-33138419 | MS.gene052374:CDS |
| AGCTCAGCTCAAACTGAGGT+TGG | 0.506186 | 4.4:-33138425 | MS.gene052374:CDS |
| TGGCTACACTCTTTATCCCC+CGG | 0.506814 | 4.4:-33137611 | MS.gene052374:CDS |
| CTCAAACTGAGGTTGGCGAT+GGG | 0.510685 | 4.4:-33138418 | MS.gene052374:CDS |
| TCTCAAACTTACAGCTCCCC+TGG | 0.510823 | 4.4:-33137631 | MS.gene052374:intron |
| AAGAGAACAGGGGAAGGCAC+TGG | 0.518999 | 4.4:-33138449 | MS.gene052374:intron |
| CAAAAGCAGTTTGTGATCCC+TGG | 0.521828 | 4.4:-33137517 | MS.gene052374:CDS |
| ATGCGGTTGCAGACATATGC+GGG | 0.533450 | 4.4:-33141991 | MS.gene052374:CDS |
| TTTGGTGCTTCTTCTCAACA+TGG | 0.534645 | 4.4:-33141869 | MS.gene052374:CDS |
| ACAACCAGTGCTCTGCAGGT+AGG | 0.540446 | 4.4:+33139662 | None:intergenic |
| AGCTCCCTTATTAAGTGCAA+AGG | 0.546217 | 4.4:+33140002 | None:intergenic |
| AACTGAGGTTGGCGATGGGG+TGG | 0.547346 | 4.4:-33138414 | MS.gene052374:CDS |
| TTCGAGAAGCCGAGGTTGAG+AGG | 0.548154 | 4.4:-33141789 | MS.gene052374:CDS |
| TACCATGCAAAAGTTGGAGA+AGG | 0.548413 | 4.4:+33138308 | None:intergenic |
| ATGATATGTAATAGCCAAAG+TGG | 0.552176 | 4.4:+33141954 | None:intergenic |
| TTGCCCTACCTGCAGAGCAC+TGG | 0.558354 | 4.4:-33139666 | MS.gene052374:CDS |
| GATGCATTCATTGGTCCACC+AGG | 0.558594 | 4.4:+33137499 | None:intergenic |
| GTCAGTGACATGCTTATGGA+GGG | 0.559139 | 4.4:-33141037 | MS.gene052374:intron |
| AAATGGAACAACTGCTACGG+GGG | 0.559604 | 4.4:-33139630 | MS.gene052374:CDS |
| AGAAAATGGAACAACTGCTA+CGG | 0.562510 | 4.4:-33139633 | MS.gene052374:CDS |
| GAACCACTGATCTTTGAACC+GGG | 0.563320 | 4.4:+33137593 | None:intergenic |
| AGAGTGCCGTAACCATGGCC+AGG | 0.565822 | 4.4:+33141686 | None:intergenic |
| GCTTAATGAGCAAGCATGGA+GGG | 0.570543 | 4.4:-33141767 | MS.gene052374:CDS |
| GGAACATAGAAGCTTTGCAC+TGG | 0.576270 | 4.4:+33137469 | None:intergenic |
| GAAGCTTTGCACTGGAGAAG+AGG | 0.582556 | 4.4:+33137477 | None:intergenic |
| ACCACTGATCTTTGAACCGG+GGG | 0.582606 | 4.4:+33137595 | None:intergenic |
| AGAGGCTTAATGAGCAAGCA+TGG | 0.584570 | 4.4:-33141771 | MS.gene052374:CDS |
| GCTGCCGCTCTAGCCATGAT+CGG | 0.589627 | 4.4:+33139693 | None:intergenic |
| CTCTTCACGACAGATGATGC+AGG | 0.590049 | 4.4:+33139769 | None:intergenic |
| TCACTTCTAACATGAATGAT+CGG | 0.592324 | 4.4:-33139920 | MS.gene052374:CDS |
| TATGGAGAGGGATCCCAGCT+GGG | 0.592564 | 4.4:-33137415 | MS.gene052374:CDS |
| TAAAGATAGTAATTGCAAAG+AGG | 0.597781 | 4.4:+33141731 | None:intergenic |
| GCCGCTCTAGCCATGATCGG+AGG | 0.598124 | 4.4:+33139696 | None:intergenic |
| GCTGCATGTGTTTGAGATGG+TGG | 0.598269 | 4.4:+33137448 | None:intergenic |
| TGGTTCTCTTCGAGAAGCCG+AGG | 0.599332 | 4.4:-33141797 | MS.gene052374:CDS |
| GGGGATAAAGAGTGTAGCCA+GGG | 0.600049 | 4.4:+33137614 | None:intergenic |
| TAACAAGAGTGCCGTAACCA+TGG | 0.600859 | 4.4:+33141681 | None:intergenic |
| TAGTCATCATGTGTGTTATG+TGG | 0.603251 | 4.4:-33141843 | MS.gene052374:CDS |
| GCCTCCGATCATGGCTAGAG+CGG | 0.604085 | 4.4:-33139697 | MS.gene052374:CDS |
| GCTCACATTACTTATGGAGA+GGG | 0.608278 | 4.4:-33137427 | MS.gene052374:CDS |
| TGTCAGTGACATGCTTATGG+AGG | 0.609892 | 4.4:-33141038 | MS.gene052374:intron |
| TGGCTTGTGATAATTTGAGT+CGG | 0.612752 | 4.4:-33138394 | MS.gene052374:CDS |
| TGGAAGCTCAGCTCAAACTG+AGG | 0.613121 | 4.4:-33138429 | MS.gene052374:CDS |
| GATGCGGTTGCAGACATATG+CGG | 0.622914 | 4.4:-33141992 | MS.gene052374:CDS |
| AACCACTGATCTTTGAACCG+GGG | 0.627402 | 4.4:+33137594 | None:intergenic |
| AGCTCACATTACTTATGGAG+AGG | 0.628005 | 4.4:-33137428 | MS.gene052374:CDS |
| ACCATGCAAAAGTTGGAGAA+GGG | 0.628689 | 4.4:+33138309 | None:intergenic |
| CAGTCAGATGCTCATCGACA+AGG | 0.633181 | 4.4:-33139593 | MS.gene052374:intron |
| TCACGAATTAAGCTCTTCAG+GGG | 0.633545 | 4.4:+33139884 | None:intergenic |
| TCAAACTGAGGTTGGCGATG+GGG | 0.640483 | 4.4:-33138417 | MS.gene052374:CDS |
| TCAGTGACATGCTTATGGAG+GGG | 0.644546 | 4.4:-33141036 | MS.gene052374:intron |
| TGAGCTGCATGTGTTTGAGA+TGG | 0.654763 | 4.4:+33137445 | None:intergenic |
| TATCATGCATTTAACAGCAG+AGG | 0.656683 | 4.4:-33141937 | MS.gene052374:CDS |
| TGAGACAACACAGACACGGA+AGG | 0.658650 | 4.4:+33141604 | None:intergenic |
| TGTCGATGAGCATCTGACTG+TGG | 0.667132 | 4.4:+33139596 | None:intergenic |
| GGCTTAATGAGCAAGCATGG+AGG | 0.669584 | 4.4:-33141768 | MS.gene052374:CDS |
| AAGCAGTTTGTGATCCCTGG+TGG | 0.673279 | 4.4:-33137514 | MS.gene052374:CDS |
| AATGGAACAACTGCTACGGG+GGG | 0.692034 | 4.4:-33139629 | MS.gene052374:CDS |
| GGGATAAAGAGTGTAGCCAG+GGG | 0.695029 | 4.4:+33137615 | None:intergenic |
| TAATGAGCAAGCATGGAGGG+AGG | 0.696339 | 4.4:-33141764 | MS.gene052374:CDS |
| AAAATGGAACAACTGCTACG+GGG | 0.697725 | 4.4:-33139631 | MS.gene052374:CDS |
| AAGTGATCTTACGATAACGT+AGG | 0.711084 | 4.4:+33139937 | None:intergenic |
| ATGCATTCATTGGTCCACCA+GGG | 0.712072 | 4.4:+33137500 | None:intergenic |
| TCAAACAAAACTCCAGAACG+AGG | 0.714394 | 4.4:-33137389 | None:intergenic |
| ACTGCAAAGAAGCTTCTATG+CGG | 0.744439 | 4.4:-33139740 | MS.gene052374:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATGAATAAAAAAAATTAAC+GGG | + | chr4.4:33140368-33140387 | None:intergenic | 10.0% |
| !!! | ATGTTTAAATTATTTTTGAA+TGG | - | chr4.4:33140803-33140822 | MS.gene052374:intron | 10.0% |
| !!! | CAATATGTTATTTTTTAATT+CGG | + | chr4.4:33138819-33138838 | None:intergenic | 10.0% |
| !!! | TGTTTAAATTATTTTTGAAT+GGG | - | chr4.4:33140804-33140823 | MS.gene052374:intron | 10.0% |
| !! | AAAAAATGAAGAAATATAGT+TGG | - | chr4.4:33140203-33140222 | MS.gene052374:intron | 15.0% |
| !! | AAAAAGATGCAAAATAAATA+AGG | - | chr4.4:33140041-33140060 | MS.gene052374:intron | 15.0% |
| !! | AAAAGATGCAAAATAAATAA+GGG | - | chr4.4:33140042-33140061 | MS.gene052374:intron | 15.0% |
| !! | AAAATAAACAACATATACTA+TGG | + | chr4.4:33138544-33138563 | None:intergenic | 15.0% |
| !! | AAAGAAATAATTAATGTACT+TGG | - | chr4.4:33140074-33140093 | MS.gene052374:intron | 15.0% |
| !! | AAGAAAATTTATAAAATAGC+AGG | + | chr4.4:33140289-33140308 | None:intergenic | 15.0% |
| !! | AATTCTCTTTATAATGTTAT+AGG | - | chr4.4:33138200-33138219 | MS.gene052374:intron | 15.0% |
| !! | CAAAACTCTTAAATTAATAA+CGG | - | chr4.4:33141231-33141250 | MS.gene052374:intron | 15.0% |
| !! | CGAATTAAAAAATAACATAT+TGG | - | chr4.4:33138817-33138836 | MS.gene052374:intron | 15.0% |
| !!! | AAAATATTCGTACTTTTTTT+GGG | - | chr4.4:33140761-33140780 | MS.gene052374:intron | 15.0% |
| !!! | GTTTAAATTATTTTTGAATG+GGG | - | chr4.4:33140805-33140824 | MS.gene052374:intron | 15.0% |
| !!! | TAAAATATTCGTACTTTTTT+TGG | - | chr4.4:33140760-33140779 | MS.gene052374:intron | 15.0% |
| !!! | TAACTGTCTTTTTTATTTAT+TGG | - | chr4.4:33139116-33139135 | MS.gene052374:intron | 15.0% |
| !!! | TGAATCAATATTTTTAGATA+TGG | - | chr4.4:33139570-33139589 | MS.gene052374:intron | 15.0% |
| !! | AAAGGAAACAATCTTAATTT+AGG | + | chr4.4:33141443-33141462 | None:intergenic | 20.0% |
| !! | GAAATTTGATTACTTTAATC+TGG | - | chr4.4:33140827-33140846 | MS.gene052374:intron | 20.0% |
| !! | GATTTAACATTTAAAGAGAA+AGG | + | chr4.4:33141461-33141480 | None:intergenic | 20.0% |
| !! | TAAATCAAATTAAAGTCAGA+AGG | + | chr4.4:33139342-33139361 | None:intergenic | 20.0% |
| !! | TCATTGAAAACATGTAAATT+TGG | + | chr4.4:33138660-33138679 | None:intergenic | 20.0% |
| !! | TCTTTACTATACAAATCTTA+TGG | + | chr4.4:33141544-33141563 | None:intergenic | 20.0% |
| !!! | AAATATTCGTACTTTTTTTG+GGG | - | chr4.4:33140762-33140781 | MS.gene052374:intron | 20.0% |
| !!! | AGTACGAATATTTTAGAATT+TGG | + | chr4.4:33140755-33140774 | None:intergenic | 20.0% |
| !!! | AGTATATTATTTCTAGGATA+CGG | - | chr4.4:33140169-33140188 | MS.gene052374:intron | 20.0% |
| !!! | ATTTGATTTATCAGAAACTA+TGG | - | chr4.4:33139352-33139371 | MS.gene052374:intron | 20.0% |
| !!! | GACAATTTTTTTTCTCAAAA+GGG | - | chr4.4:33140124-33140143 | MS.gene052374:intron | 20.0% |
| !!! | GGATTCTAAATATTGATTTT+TGG | - | chr4.4:33138838-33138857 | MS.gene052374:intron | 20.0% |
| !!! | TAAATATATGTTTCTATCTC+AGG | - | chr4.4:33138267-33138286 | MS.gene052374:intron | 20.0% |
| !!! | TATTTTGAAAGCATTTCAAA+TGG | - | chr4.4:33138558-33138577 | MS.gene052374:intron | 20.0% |
| !!! | TCACTTATAAACATTTTTTC+AGG | + | chr4.4:33140474-33140493 | None:intergenic | 20.0% |
| !!! | TGACATTGTTAATTTTACTA+TGG | - | chr4.4:33137964-33137983 | MS.gene052374:intron | 20.0% |
| ! | AAATTCTCTAACATGATTTC+TGG | - | chr4.4:33137988-33138007 | MS.gene052374:intron | 25.0% |
| ! | AGGACTAATCAGATTATTTA+AGG | - | chr4.4:33138792-33138811 | MS.gene052374:intron | 25.0% |
| ! | CATCATATGAAAAATGGAAA+AGG | - | chr4.4:33141164-33141183 | MS.gene052374:intron | 25.0% |
| ! | GTTATTTATTCATGGCTAAT+AGG | - | chr4.4:33139014-33139033 | MS.gene052374:intron | 25.0% |
| ! | TAAAGATAGTAATTGCAAAG+AGG | + | chr4.4:33137653-33137672 | None:intergenic | 25.0% |
| ! | TAAATTAACTCTCTCTCTTA+AGG | + | chr4.4:33139988-33140007 | None:intergenic | 25.0% |
| ! | TATTGACAACATATACACAT+AGG | - | chr4.4:33138742-33138761 | MS.gene052374:intron | 25.0% |
| ! | TCTCTTTATAATGTTATAGG+AGG | - | chr4.4:33138203-33138222 | MS.gene052374:intron | 25.0% |
| ! | TTATAATGTTATAGGAGGTT+TGG | - | chr4.4:33138208-33138227 | MS.gene052374:intron | 25.0% |
| ! | TTTCAGTAACTATAGAAAAG+AGG | + | chr4.4:33141121-33141140 | None:intergenic | 25.0% |
| !! | ACCAAATGAGTCTTATAATA+AGG | - | chr4.4:33140101-33140120 | MS.gene052374:intron | 25.0% |
| !! | CAAAATAAATAAGGGTATGT+TGG | - | chr4.4:33140050-33140069 | MS.gene052374:intron | 25.0% |
| !! | CAATTTTGTAGGATTTAGTT+AGG | - | chr4.4:33140517-33140536 | MS.gene052374:intron | 25.0% |
| !! | CCAAATGAGTCTTATAATAA+GGG | - | chr4.4:33140102-33140121 | MS.gene052374:intron | 25.0% |
| !! | GAGAAAAAAGCATAAAAAAC+AGG | + | chr4.4:33139275-33139294 | None:intergenic | 25.0% |
| !! | TCAAAAGGGTCTTATAATTA+GGG | - | chr4.4:33140138-33140157 | MS.gene052374:intron | 25.0% |
| !! | TGCATTTAGTCTAAAATTCA+GGG | + | chr4.4:33138975-33138994 | None:intergenic | 25.0% |
| !! | TTGCATTTAGTCTAAAATTC+AGG | + | chr4.4:33138976-33138995 | None:intergenic | 25.0% |
| !!! | AGTTCGAATCATATCTTTTT+TGG | - | chr4.4:33137800-33137819 | MS.gene052374:intron | 25.0% |
| !!! | GACAAAAATGTTTTAACTTC+TGG | + | chr4.4:33138170-33138189 | None:intergenic | 25.0% |
| !!! | GGACAATTTTTTTTCTCAAA+AGG | - | chr4.4:33140123-33140142 | MS.gene052374:intron | 25.0% |
| !!! | GGTTTAGTGTTATTTATTCA+TGG | - | chr4.4:33139006-33139025 | MS.gene052374:intron | 25.0% |
| !!! | GTTCGAATCATATCTTTTTT+GGG | - | chr4.4:33137801-33137820 | MS.gene052374:intron | 25.0% |
| !!! | TTAACTAAAAAGGTGTTTCT+TGG | - | chr4.4:33137564-33137583 | MS.gene052374:CDS | 25.0% |
| !!! | TTCGAATCATATCTTTTTTG+GGG | - | chr4.4:33137802-33137821 | MS.gene052374:intron | 25.0% |
| ACTAAATGCAAGAACATGTA+AGG | - | chr4.4:33138985-33139004 | MS.gene052374:intron | 30.0% | |
| ACTATTGCACTTTGTATATG+CGG | - | chr4.4:33140243-33140262 | MS.gene052374:intron | 30.0% | |
| ATGAAGTTTAAATCATGCGA+GGG | + | chr4.4:33138499-33138518 | None:intergenic | 30.0% | |
| ATGATATGTAATAGCCAAAG+TGG | + | chr4.4:33137430-33137449 | None:intergenic | 30.0% | |
| ATTACGGAGATTAAGAAAGT+TGG | - | chr4.4:33139914-33139933 | MS.gene052374:CDS | 30.0% | |
| ATTTGGACATTAGCACTATT+TGG | + | chr4.4:33138643-33138662 | None:intergenic | 30.0% | |
| CAAAGATCATCTTAGATTCA+AGG | + | chr4.4:33141583-33141602 | None:intergenic | 30.0% | |
| CATATGAAAAATGGAAAAGG+TGG | - | chr4.4:33141167-33141186 | MS.gene052374:intron | 30.0% | |
| CCCTTATTATAAGACTCATT+TGG | + | chr4.4:33140105-33140124 | None:intergenic | 30.0% | |
| CTCTCTCATCATATGAAAAA+TGG | - | chr4.4:33141158-33141177 | MS.gene052374:intron | 30.0% | |
| TATGAAGTTTAAATCATGCG+AGG | + | chr4.4:33138500-33138519 | None:intergenic | 30.0% | |
| TATGTGGCAGTTAACTAAAA+AGG | - | chr4.4:33137554-33137573 | MS.gene052374:CDS | 30.0% | |
| TATTTATTGGACATGATACC+TGG | - | chr4.4:33139129-33139148 | MS.gene052374:intron | 30.0% | |
| TATTTGAGAAGGGGAAAAAA+AGG | + | chr4.4:33137939-33137958 | None:intergenic | 30.0% | |
| TCACTTCTAACATGAATGAT+CGG | - | chr4.4:33139461-33139480 | MS.gene052374:intron | 30.0% | |
| TGCAATTACTATCTTTAGAC+AGG | - | chr4.4:33137656-33137675 | MS.gene052374:intron | 30.0% | |
| TGTTCCTTTGCACTTAATAA+GGG | - | chr4.4:33139375-33139394 | MS.gene052374:intron | 30.0% | |
| TTTCTATGCAGTGAAATGTT+TGG | - | chr4.4:33141400-33141419 | MS.gene052374:intron | 30.0% | |
| ! | ACTATAGAAAAGAGGCATAT+TGG | + | chr4.4:33141113-33141132 | None:intergenic | 30.0% |
| ! | ATCTCCGTAATTTTTGCAAA+AGG | + | chr4.4:33139905-33139924 | None:intergenic | 30.0% |
| ! | ATTCTCTTTTCCTATCTTCA+AGG | + | chr4.4:33139048-33139067 | None:intergenic | 30.0% |
| ! | CTCAAAAGGGTCTTATAATT+AGG | - | chr4.4:33140137-33140156 | MS.gene052374:intron | 30.0% |
| ! | CTTTGTTTCTTGAAGTTACA+AGG | + | chr4.4:33141635-33141654 | None:intergenic | 30.0% |
| ! | GGAGGTAGTATATTATTTCT+AGG | - | chr4.4:33140163-33140182 | MS.gene052374:intron | 30.0% |
| ! | TCTTAGTTTAATTGCCACTT+TGG | - | chr4.4:33137413-33137432 | MS.gene052374:CDS | 30.0% |
| ! | TTCTCTTTTCCTATCTTCAA+GGG | + | chr4.4:33139047-33139066 | None:intergenic | 30.0% |
| !! | AAAATTGACTTGTAAGGGAA+GGG | + | chr4.4:33140504-33140523 | None:intergenic | 30.0% |
| !! | CCTACAAAATTGACTTGTAA+GGG | + | chr4.4:33140509-33140528 | None:intergenic | 30.0% |
| !! | TCCTACAAAATTGACTTGTA+AGG | + | chr4.4:33140510-33140529 | None:intergenic | 30.0% |
| !!! | ACTTCTCTTTTTGAGATGTA+AGG | - | chr4.4:33139234-33139253 | MS.gene052374:intron | 30.0% |
| !!! | AGAGCTCACATTTTTTTTGT+AGG | + | chr4.4:33140321-33140340 | None:intergenic | 30.0% |
| !!! | CTTCTCTTTTTGAGATGTAA+GGG | - | chr4.4:33139235-33139254 | MS.gene052374:intron | 30.0% |
| !!! | GAGCTCACATTTTTTTTGTA+GGG | + | chr4.4:33140320-33140339 | None:intergenic | 30.0% |
| !!! | GGCTTATTACTTTTAGAATC+TGG | - | chr4.4:33141353-33141372 | MS.gene052374:intron | 30.0% |
| !!! | GTTTTACTTGGAACTTGTTA+GGG | - | chr4.4:33138394-33138413 | MS.gene052374:CDS | 30.0% |
| AAGCGTCAAAAAGTAGAGTT+AGG | + | chr4.4:33141494-33141513 | None:intergenic | 35.0% | |
| AAGTGATCTTACGATAACGT+AGG | + | chr4.4:33139447-33139466 | None:intergenic | 35.0% | |
| AAGTTACACTTACATGTTGC+AGG | - | chr4.4:33138874-33138893 | MS.gene052374:intron | 35.0% | |
| AGAAAATGGAACAACTGCTA+CGG | - | chr4.4:33139748-33139767 | MS.gene052374:CDS | 35.0% | |
| ATTGCTTACCATGCAAAAGT+TGG | + | chr4.4:33141082-33141101 | None:intergenic | 35.0% | |
| CAATGACTCATTGAAAGACT+TGG | - | chr4.4:33138674-33138693 | MS.gene052374:intron | 35.0% | |
| GAAAAGAGAATCAGTTCTGT+AGG | - | chr4.4:33139057-33139076 | MS.gene052374:intron | 35.0% | |
| GATTAAGTATTCCAGCCTTA+CGG | - | chr4.4:33139304-33139323 | MS.gene052374:intron | 35.0% | |
| GCAAAAGGCTCCTATATTTA+GGG | + | chr4.4:33139890-33139909 | None:intergenic | 35.0% | |
| GGATTTCTCTATTACATTCC+TGG | - | chr4.4:33137677-33137696 | MS.gene052374:intron | 35.0% | |
| GTGTTCCTTTGCACTTAATA+AGG | - | chr4.4:33139374-33139393 | MS.gene052374:intron | 35.0% | |
| TAAGATGATCTTTGTTCACG+AGG | - | chr4.4:33141589-33141608 | MS.gene052374:intron | 35.0% | |
| TAGTCATCATGTGTGTTATG+TGG | - | chr4.4:33137538-33137557 | MS.gene052374:CDS | 35.0% | |
| TATCATGCATTTAACAGCAG+AGG | - | chr4.4:33137444-33137463 | MS.gene052374:CDS | 35.0% | |
| TATGTACATGTGCTTCTTTC+TGG | - | chr4.4:33138433-33138452 | MS.gene052374:CDS | 35.0% | |
| TCATACAACGTAAGCATACT+GGG | + | chr4.4:33138721-33138740 | None:intergenic | 35.0% | |
| TCTAATAATGCTGAGCTTGA+TGG | - | chr4.4:33141816-33141835 | MS.gene052374:CDS | 35.0% | |
| TGACCATTTACAACTGTTTC+TGG | + | chr4.4:33141668-33141687 | None:intergenic | 35.0% | |
| TGAGATGTAAGGGAATTGTT+TGG | - | chr4.4:33139245-33139264 | MS.gene052374:intron | 35.0% | |
| TGCAAAAGGCTCCTATATTT+AGG | + | chr4.4:33139891-33139910 | None:intergenic | 35.0% | |
| TGTTAATCAAGGCTTTGCAT+TGG | - | chr4.4:33137718-33137737 | MS.gene052374:intron | 35.0% | |
| TTCATACAACGTAAGCATAC+TGG | + | chr4.4:33138722-33138741 | None:intergenic | 35.0% | |
| ! | AAGGGTCTTATAATTAGGGA+CGG | - | chr4.4:33140142-33140161 | MS.gene052374:intron | 35.0% |
| ! | ACAAAGTGCAATAGTTTGTC+AGG | + | chr4.4:33140238-33140257 | None:intergenic | 35.0% |
| ! | ACTTTTTGACGCTTTGTCAT+GGG | - | chr4.4:33141500-33141519 | MS.gene052374:intron | 35.0% |
| ! | ATGTCACTGACTATTTGAGA+AGG | + | chr4.4:33137950-33137969 | None:intergenic | 35.0% |
| ! | CAGTTGTTCCATTTTCTGAT+GGG | + | chr4.4:33139745-33139764 | None:intergenic | 35.0% |
| ! | CCCTTACAAGTCAATTTTGT+AGG | - | chr4.4:33140506-33140525 | MS.gene052374:intron | 35.0% |
| ! | GACCATTTACAACTGTTTCT+GGG | + | chr4.4:33141667-33141686 | None:intergenic | 35.0% |
| ! | GGAGCCTTTTGCAAAAATTA+CGG | - | chr4.4:33139898-33139917 | MS.gene052374:CDS | 35.0% |
| ! | TAACATGATTTCTGGAAGGA+TGG | - | chr4.4:33137996-33138015 | MS.gene052374:intron | 35.0% |
| ! | TCTCTAACATGATTTCTGGA+AGG | - | chr4.4:33137992-33138011 | MS.gene052374:intron | 35.0% |
| ! | TGGCTTGTGATAATTTGAGT+CGG | - | chr4.4:33140987-33141006 | MS.gene052374:CDS | 35.0% |
| ! | TGTCACTGACTATTTGAGAA+GGG | + | chr4.4:33137949-33137968 | None:intergenic | 35.0% |
| ! | TTAATCTGGAATATCACCCA+GGG | - | chr4.4:33140841-33140860 | MS.gene052374:intron | 35.0% |
| ! | TTTAATCTGGAATATCACCC+AGG | - | chr4.4:33140840-33140859 | MS.gene052374:intron | 35.0% |
| !! | ACCATTTACAACTGTTTCTG+GGG | + | chr4.4:33141666-33141685 | None:intergenic | 35.0% |
| !! | CAAAATTGACTTGTAAGGGA+AGG | + | chr4.4:33140505-33140524 | None:intergenic | 35.0% |
| !! | CGTTTTACTTGGAACTTGTT+AGG | - | chr4.4:33138393-33138412 | MS.gene052374:CDS | 35.0% |
| !! | GAAAAAGTATTCATAAGCCG+TGG | - | chr4.4:33140681-33140700 | MS.gene052374:intron | 35.0% |
| !! | TACTTTTTGACGCTTTGTCA+TGG | - | chr4.4:33141499-33141518 | MS.gene052374:intron | 35.0% |
| !! | TAGCCTAATGATTCTAGGAT+AGG | + | chr4.4:33140573-33140592 | None:intergenic | 35.0% |
| AAAATGGAACAACTGCTACG+GGG | - | chr4.4:33139750-33139769 | MS.gene052374:CDS | 40.0% | |
| AACTTGAGACAACACAGACA+CGG | + | chr4.4:33137784-33137803 | None:intergenic | 40.0% | |
| AAGGCTCCTATATTTAGGGA+CGG | + | chr4.4:33139886-33139905 | None:intergenic | 40.0% | |
| ACATGTTGCAGGTAAGTTCA+TGG | - | chr4.4:33138885-33138904 | MS.gene052374:intron | 40.0% | |
| ACCATGCAAAAGTTGGAGAA+GGG | + | chr4.4:33141075-33141094 | None:intergenic | 40.0% | |
| ACTAACCTCGAAAGAGAACA+GGG | - | chr4.4:33140921-33140940 | MS.gene052374:intron | 40.0% | |
| ACTCACGAATTAAGCTCTTC+AGG | + | chr4.4:33139502-33139521 | None:intergenic | 40.0% | |
| ACTGCAAAGAAGCTTCTATG+CGG | - | chr4.4:33139641-33139660 | MS.gene052374:CDS | 40.0% | |
| AGCAACTTCCAAGATCAGTT+TGG | - | chr4.4:33137494-33137513 | MS.gene052374:CDS | 40.0% | |
| AGCTCACATTACTTATGGAG+AGG | - | chr4.4:33141953-33141972 | MS.gene052374:CDS | 40.0% | |
| AGCTCCCTTATTAAGTGCAA+AGG | + | chr4.4:33139382-33139401 | None:intergenic | 40.0% | |
| AGGGAATAATACTCAGACAC+AGG | + | chr4.4:33138480-33138499 | None:intergenic | 40.0% | |
| AGGTAAAGACAAAAGCCGTA+AGG | + | chr4.4:33139322-33139341 | None:intergenic | 40.0% | |
| CATGCAGCTCACATTACTTA+TGG | - | chr4.4:33141948-33141967 | MS.gene052374:CDS | 40.0% | |
| CTATGTCAGTGACATGCTTA+TGG | - | chr4.4:33138340-33138359 | MS.gene052374:CDS | 40.0% | |
| CTCACGAATTAAGCTCTTCA+GGG | + | chr4.4:33139501-33139520 | None:intergenic | 40.0% | |
| GAAAATGGAACAACTGCTAC+GGG | - | chr4.4:33139749-33139768 | MS.gene052374:CDS | 40.0% | |
| GAGCCTATCCTAGAATCATT+AGG | - | chr4.4:33140567-33140586 | MS.gene052374:intron | 40.0% | |
| GCTCACATTACTTATGGAGA+GGG | - | chr4.4:33141954-33141973 | MS.gene052374:CDS | 40.0% | |
| GGAATGATACCCTTGAAGAT+AGG | - | chr4.4:33139035-33139054 | MS.gene052374:intron | 40.0% | |
| GGGCTACTAGCAAAAAATTC+AGG | + | chr4.4:33138701-33138720 | None:intergenic | 40.0% | |
| GGTTGCATTTAAAAAGCCAG+TGG | - | chr4.4:33138906-33138925 | MS.gene052374:intron | 40.0% | |
| GTTGCTAAATAGACCATTGC+CGG | + | chr4.4:33137480-33137499 | None:intergenic | 40.0% | |
| TAAAATAGCAGGCCACTGTT+TGG | + | chr4.4:33140278-33140297 | None:intergenic | 40.0% | |
| TACCATGCAAAAGTTGGAGA+AGG | + | chr4.4:33141076-33141095 | None:intergenic | 40.0% | |
| TACGGCACTCTTGTTAATCA+AGG | - | chr4.4:33137707-33137726 | MS.gene052374:intron | 40.0% | |
| TACTAACCTCGAAAGAGAAC+AGG | - | chr4.4:33140920-33140939 | MS.gene052374:intron | 40.0% | |
| TCACGAATTAAGCTCTTCAG+GGG | + | chr4.4:33139500-33139519 | None:intergenic | 40.0% | |
| TCCAAGTAAAACGTGAAGAC+TGG | + | chr4.4:33138386-33138405 | None:intergenic | 40.0% | |
| TGAACCACTGATCTTTGAAC+CGG | + | chr4.4:33141792-33141811 | None:intergenic | 40.0% | |
| ! | AATCAAGGCTTTGCATTGGT+TGG | - | chr4.4:33137722-33137741 | MS.gene052374:intron | 40.0% |
| ! | ACCAGTCTTCACGTTTTACT+TGG | - | chr4.4:33138382-33138401 | MS.gene052374:CDS | 40.0% |
| ! | GAGCGATTCTATCTAGAATG+AGG | - | chr4.4:33141332-33141351 | MS.gene052374:intron | 40.0% |
| ! | GATTAGTCCTGCTGTACTAA+GGG | + | chr4.4:33138782-33138801 | None:intergenic | 40.0% |
| ! | GCAGTTGTTCCATTTTCTGA+TGG | + | chr4.4:33139746-33139765 | None:intergenic | 40.0% |
| ! | GTCACTGACTATTTGAGAAG+GGG | + | chr4.4:33137948-33137967 | None:intergenic | 40.0% |
| ! | GTCTGATTTGATGCTTTCTG+TGG | - | chr4.4:33138141-33138160 | MS.gene052374:intron | 40.0% |
| ! | TAACGGGAACTTTTTGCAAG+TGG | + | chr4.4:33140352-33140371 | None:intergenic | 40.0% |
| ! | TGATTAGTCCTGCTGTACTA+AGG | + | chr4.4:33138783-33138802 | None:intergenic | 40.0% |
| !! | AAGAAGCACCAAACTGATCT+TGG | + | chr4.4:33137505-33137524 | None:intergenic | 40.0% |
| !! | CATTTACAACTGTTTCTGGG+GGG | + | chr4.4:33141664-33141683 | None:intergenic | 40.0% |
| !! | CCATTTACAACTGTTTCTGG+GGG | + | chr4.4:33141665-33141684 | None:intergenic | 40.0% |
| !! | TTTGGTGCTTCTTCTCAACA+TGG | - | chr4.4:33137512-33137531 | MS.gene052374:CDS | 40.0% |
| AAAGACAAAAGCCGTAAGGC+TGG | + | chr4.4:33139318-33139337 | None:intergenic | 45.0% | |
| AAAGCAGACGTATCAAAGCC+AGG | + | chr4.4:33139150-33139169 | None:intergenic | 45.0% | |
| AAATGGAACAACTGCTACGG+GGG | - | chr4.4:33139751-33139770 | MS.gene052374:CDS | 45.0% | |
| AACCACTGATCTTTGAACCG+GGG | + | chr4.4:33141790-33141809 | None:intergenic | 45.0% | |
| AAGCGCCATCAAGAAGAAGA+AGG | + | chr4.4:33137830-33137849 | None:intergenic | 45.0% | |
| ACACTCAAGATGTCCAGTCT+TGG | - | chr4.4:33140611-33140630 | MS.gene052374:intron | 45.0% | |
| ACATCTCTAACCTTACGAGC+TGG | - | chr4.4:33140704-33140723 | MS.gene052374:intron | 45.0% | |
| ACGGGTAGCCTAATGATTCT+AGG | + | chr4.4:33140578-33140597 | None:intergenic | 45.0% | |
| AGACCATTGCCGGATAAAAC+TGG | + | chr4.4:33137470-33137489 | None:intergenic | 45.0% | |
| AGAGGCTTAATGAGCAAGCA+TGG | - | chr4.4:33137610-33137629 | MS.gene052374:CDS | 45.0% | |
| ATCAAGTGCCACATTGCTCA+GGG | - | chr4.4:33138591-33138610 | MS.gene052374:intron | 45.0% | |
| ATGCATTCATTGGTCCACCA+GGG | + | chr4.4:33141884-33141903 | None:intergenic | 45.0% | |
| ATGTCCAGTCTTGGTTGTGA+TGG | - | chr4.4:33140620-33140639 | MS.gene052374:intron | 45.0% | |
| ATGTTCATTGCCTCCGATCA+TGG | - | chr4.4:33139675-33139694 | MS.gene052374:CDS | 45.0% | |
| CAAAAGCAGTTTGTGATCCC+TGG | - | chr4.4:33141864-33141883 | MS.gene052374:CDS | 45.0% | |
| CCCCCAGAAACAGTTGTAAA+TGG | - | chr4.4:33141662-33141681 | MS.gene052374:CDS | 45.0% | |
| CGTAAGGTTAGAGATGTCCA+CGG | + | chr4.4:33140701-33140720 | None:intergenic | 45.0% | |
| CTAACCTCGAAAGAGAACAG+GGG | - | chr4.4:33140922-33140941 | MS.gene052374:intron | 45.0% | |
| CTACCTCCGTCCCTAAATAT+AGG | - | chr4.4:33139877-33139896 | MS.gene052374:intron | 45.0% | |
| CTCATTAAGCCTCTCAACCT+CGG | + | chr4.4:33137604-33137623 | None:intergenic | 45.0% | |
| CTCCTCAAGCAGTAATCAGA+AGG | + | chr4.4:33141301-33141320 | None:intergenic | 45.0% | |
| CTCTATTACATTCCTGGCCA+TGG | - | chr4.4:33137683-33137702 | MS.gene052374:intron | 45.0% | |
| CTGGTTGTCCCATCAGAAAA+TGG | - | chr4.4:33139734-33139753 | MS.gene052374:CDS | 45.0% | |
| CTTCTGATTACTGCTTGAGG+AGG | - | chr4.4:33141299-33141318 | MS.gene052374:intron | 45.0% | |
| GAACCACTGATCTTTGAACC+GGG | + | chr4.4:33141791-33141810 | None:intergenic | 45.0% | |
| GCATTTACTAGCAAGCAAGC+AGG | - | chr4.4:33137869-33137888 | MS.gene052374:intron | 45.0% | |
| GCTTAATGAGCAAGCATGGA+GGG | - | chr4.4:33137614-33137633 | MS.gene052374:CDS | 45.0% | |
| GGAACATAGAAGCTTTGCAC+TGG | + | chr4.4:33141915-33141934 | None:intergenic | 45.0% | |
| GGAGAAGAGGATGCATTCAT+TGG | + | chr4.4:33141894-33141913 | None:intergenic | 45.0% | |
| GGGAGCTATACGAGACATTT+AGG | - | chr4.4:33139395-33139414 | MS.gene052374:intron | 45.0% | |
| GGGTTCCTTCTTCTTCTTGA+TGG | - | chr4.4:33137822-33137841 | MS.gene052374:intron | 45.0% | |
| GTCAGTGACATGCTTATGGA+GGG | - | chr4.4:33138344-33138363 | MS.gene052374:CDS | 45.0% | |
| GTCCTTCTGATTACTGCTTG+AGG | - | chr4.4:33141296-33141315 | MS.gene052374:intron | 45.0% | |
| TACATTCCTGGCCATGGTTA+CGG | - | chr4.4:33137689-33137708 | MS.gene052374:intron | 45.0% | |
| TCAGTGACATGCTTATGGAG+GGG | - | chr4.4:33138345-33138364 | MS.gene052374:CDS | 45.0% | |
| TGAAGTTCCCTTAGTACAGC+AGG | - | chr4.4:33138772-33138791 | MS.gene052374:intron | 45.0% | |
| TGAGCTGCATGTGTTTGAGA+TGG | + | chr4.4:33141939-33141958 | None:intergenic | 45.0% | |
| TGGAAAAGGTGGCTTCAAAG+TGG | - | chr4.4:33141178-33141197 | MS.gene052374:intron | 45.0% | |
| TGTCAGTGACATGCTTATGG+AGG | - | chr4.4:33138343-33138362 | MS.gene052374:CDS | 45.0% | |
| TGTCCAGTCTTGGTTGTGAT+GGG | - | chr4.4:33140621-33140640 | MS.gene052374:intron | 45.0% | |
| ! | AAGCCAGTGGCATGCTTTTA+TGG | - | chr4.4:33138919-33138938 | MS.gene052374:intron | 45.0% |
| ! | ACCCTTCTCCAACTTTTGCA+TGG | - | chr4.4:33141071-33141090 | MS.gene052374:intron | 45.0% |
| ! | AGCCAGTGGCATGCTTTTAT+GGG | - | chr4.4:33138920-33138939 | MS.gene052374:intron | 45.0% |
| ! | GGTCTTATAATTAGGGACGG+AGG | - | chr4.4:33140145-33140164 | MS.gene052374:intron | 45.0% |
| !! | TAACAAGAGTGCCGTAACCA+TGG | + | chr4.4:33137703-33137722 | None:intergenic | 45.0% |
| !! | TAATCAAGCCTTGTTCTCGC+TGG | + | chr4.4:33140867-33140886 | None:intergenic | 45.0% |
| !! | TTTTGTTTGAGCTCCCAGCT+GGG | + | chr4.4:33141982-33142001 | None:intergenic | 45.0% |
| !!! | AACCTTACGAGCTGGTTTTG+TGG | - | chr4.4:33140712-33140731 | MS.gene052374:intron | 45.0% |
| !! | TTATGAATAAAAAAAATTAA+CGG | + | chr4.4:33140369-33140388 | None:intergenic | 5.0% |
| AAGCAGTTTGTGATCCCTGG+TGG | - | chr4.4:33141867-33141886 | MS.gene052374:CDS | 50.0% | |
| AATGGAACAACTGCTACGGG+GGG | - | chr4.4:33139752-33139771 | MS.gene052374:CDS | 50.0% | |
| ACATGCTTATGGAGGGGCAA+TGG | - | chr4.4:33138351-33138370 | MS.gene052374:CDS | 50.0% | |
| ACCACTGATCTTTGAACCGG+GGG | + | chr4.4:33141789-33141808 | None:intergenic | 50.0% | |
| ACTAGCAAGCAAGCAGGCTT+CGG | - | chr4.4:33137875-33137894 | MS.gene052374:intron | 50.0% | |
| AGCTCAGCTCAAACTGAGGT+TGG | - | chr4.4:33140956-33140975 | MS.gene052374:CDS | 50.0% | |
| AGTGTGAGCCAAGTGACTAC+GGG | + | chr4.4:33140596-33140615 | None:intergenic | 50.0% | |
| ATGCGGTTGCAGACATATGC+GGG | - | chr4.4:33137390-33137409 | MS.gene052374:CDS | 50.0% | |
| CAGTCAGATGCTCATCGACA+AGG | - | chr4.4:33139788-33139807 | MS.gene052374:intron | 50.0% | |
| CATGCTTATGGAGGGGCAAT+GGG | - | chr4.4:33138352-33138371 | MS.gene052374:CDS | 50.0% | |
| CTCAAACTGAGGTTGGCGAT+GGG | - | chr4.4:33140963-33140982 | MS.gene052374:CDS | 50.0% | |
| CTCCACAAAACCAGCTCGTA+AGG | + | chr4.4:33140717-33140736 | None:intergenic | 50.0% | |
| CTCTTCACGACAGATGATGC+AGG | + | chr4.4:33139615-33139634 | None:intergenic | 50.0% | |
| GAAGCTTTGCACTGGAGAAG+AGG | + | chr4.4:33141907-33141926 | None:intergenic | 50.0% | |
| GAGTGTGAGCCAAGTGACTA+CGG | + | chr4.4:33140597-33140616 | None:intergenic | 50.0% | |
| GATCAAGTGCCACATTGCTC+AGG | - | chr4.4:33138590-33138609 | MS.gene052374:intron | 50.0% | |
| GATGCATTCATTGGTCCACC+AGG | + | chr4.4:33141885-33141904 | None:intergenic | 50.0% | |
| GCTCCTATATTTAGGGACGG+AGG | + | chr4.4:33139883-33139902 | None:intergenic | 50.0% | |
| GCTCTTTACCCTGAGCAATG+TGG | + | chr4.4:33138602-33138621 | None:intergenic | 50.0% | |
| GGCTTAATGAGCAAGCATGG+AGG | - | chr4.4:33137613-33137632 | MS.gene052374:CDS | 50.0% | |
| GTCCAGTCTTGGTTGTGATG+GGG | - | chr4.4:33140622-33140641 | MS.gene052374:intron | 50.0% | |
| TAATGAGCAAGCATGGAGGG+AGG | - | chr4.4:33137617-33137636 | MS.gene052374:CDS | 50.0% | |
| TAGCAGGCCACTGTTTGGAA+AGG | + | chr4.4:33140273-33140292 | None:intergenic | 50.0% | |
| TCAAACTGAGGTTGGCGATG+GGG | - | chr4.4:33140964-33140983 | MS.gene052374:CDS | 50.0% | |
| TCTCAAACTTACAGCTCCCC+TGG | - | chr4.4:33141750-33141769 | MS.gene052374:CDS | 50.0% | |
| TGAGACAACACAGACACGGA+AGG | + | chr4.4:33137780-33137799 | None:intergenic | 50.0% | |
| TGGAAGCTCAGCTCAAACTG+AGG | - | chr4.4:33140952-33140971 | MS.gene052374:CDS | 50.0% | |
| TGGCTACACTCTTTATCCCC+CGG | - | chr4.4:33141770-33141789 | MS.gene052374:CDS | 50.0% | |
| TGTCGATGAGCATCTGACTG+TGG | + | chr4.4:33139788-33139807 | None:intergenic | 50.0% | |
| TTAGGCTACCCGTAGTCACT+TGG | - | chr4.4:33140585-33140604 | MS.gene052374:intron | 50.0% | |
| ! | CACCCATAAAAGCATGCCAC+TGG | + | chr4.4:33138925-33138944 | None:intergenic | 50.0% |
| ! | CAGTGGCATGCTTTTATGGG+TGG | - | chr4.4:33138923-33138942 | MS.gene052374:intron | 50.0% |
| ! | GCTGCATGTGTTTGAGATGG+TGG | + | chr4.4:33141936-33141955 | None:intergenic | 50.0% |
| ! | GGGATAAAGAGTGTAGCCAG+GGG | + | chr4.4:33141769-33141788 | None:intergenic | 50.0% |
| ! | GGGGATAAAGAGTGTAGCCA+GGG | + | chr4.4:33141770-33141789 | None:intergenic | 50.0% |
| !! | AGGCCAGTTTTATCCGGCAA+TGG | - | chr4.4:33137464-33137483 | MS.gene052374:CDS | 50.0% |
| !! | CAGCAGAGGCCAGTTTTATC+CGG | - | chr4.4:33137458-33137477 | MS.gene052374:CDS | 50.0% |
| !! | CAGGGTAAAGAGCACTTTGG+AGG | - | chr4.4:33138609-33138628 | MS.gene052374:intron | 50.0% |
| !! | CTGCTTTTGTGCTTGCTCAC+TGG | + | chr4.4:33141853-33141872 | None:intergenic | 50.0% |
| !! | GCTCAGGGTAAAGAGCACTT+TGG | - | chr4.4:33138606-33138625 | MS.gene052374:intron | 50.0% |
| !!! | GTTTTGTTTGAGCTCCCAGC+TGG | + | chr4.4:33141983-33142002 | None:intergenic | 50.0% |
| ACAACCAGTGCTCTGCAGGT+AGG | + | chr4.4:33139722-33139741 | None:intergenic | 55.0% | |
| AGCTCTTCAGGGGTTGCATC+TGG | + | chr4.4:33139490-33139509 | None:intergenic | 55.0% | |
| CAACCAGTGCTCTGCAGGTA+GGG | + | chr4.4:33139721-33139740 | None:intergenic | 55.0% | |
| CACCCCATCACAACCAAGAC+TGG | + | chr4.4:33140627-33140646 | None:intergenic | 55.0% | |
| CCTCGAAAGAGAACAGGGGA+AGG | - | chr4.4:33140926-33140945 | MS.gene052374:intron | 55.0% | |
| CCTTCCCCTGTTCTCTTTCG+AGG | + | chr4.4:33140929-33140948 | None:intergenic | 55.0% | |
| CGGTGCACCTTTCCAAACAG+TGG | - | chr4.4:33140263-33140282 | MS.gene052374:intron | 55.0% | |
| GCAAGCATGGAGGGAGGTTA+TGG | - | chr4.4:33137623-33137642 | MS.gene052374:intron | 55.0% | |
| GCTCAAACTGAGGTTGGCGA+TGG | - | chr4.4:33140962-33140981 | MS.gene052374:CDS | 55.0% | |
| TATGGAGAGGGATCCCAGCT+GGG | - | chr4.4:33141966-33141985 | MS.gene052374:CDS | 55.0% | |
| TCCCCCGGTTCAAAGATCAG+TGG | - | chr4.4:33141785-33141804 | MS.gene052374:CDS | 55.0% | |
| TGGTTCTCTTCGAGAAGCCG+AGG | - | chr4.4:33137584-33137603 | MS.gene052374:CDS | 55.0% | |
| TTATGGAGAGGGATCCCAGC+TGG | - | chr4.4:33141965-33141984 | MS.gene052374:CDS | 55.0% | |
| TTCGAGAAGCCGAGGTTGAG+AGG | - | chr4.4:33137592-33137611 | MS.gene052374:CDS | 55.0% | |
| ! | AAGAGAACAGGGGAAGGCAC+TGG | - | chr4.4:33140932-33140951 | MS.gene052374:intron | 55.0% |
| ! | GGGGGATAAAGAGTGTAGCC+AGG | + | chr4.4:33141771-33141790 | None:intergenic | 55.0% |
| AACTGAGGTTGGCGATGGGG+TGG | - | chr4.4:33140967-33140986 | MS.gene052374:CDS | 60.0% | |
| GCCTCCGATCATGGCTAGAG+CGG | - | chr4.4:33139684-33139703 | MS.gene052374:CDS | 60.0% | |
| GCTGCCGCTCTAGCCATGAT+CGG | + | chr4.4:33139691-33139710 | None:intergenic | 60.0% | |
| TGGGACAACCAGTGCTCTGC+AGG | + | chr4.4:33139726-33139745 | None:intergenic | 60.0% | |
| TTGCCCTACCTGCAGAGCAC+TGG | - | chr4.4:33139715-33139734 | MS.gene052374:CDS | 60.0% | |
| !! | AGAGTGCCGTAACCATGGCC+AGG | + | chr4.4:33137698-33137717 | None:intergenic | 60.0% |
| ACCCAGGGCCAGCGAGAACA+AGG | - | chr4.4:33140856-33140875 | MS.gene052374:intron | 65.0% | |
| GCCGCTCTAGCCATGATCGG+AGG | + | chr4.4:33139688-33139707 | None:intergenic | 65.0% | |
| ! | GCCTTGTTCTCGCTGGCCCT+GGG | + | chr4.4:33140860-33140879 | None:intergenic | 65.0% |
| !! | AGCCTTGTTCTCGCTGGCCC+TGG | + | chr4.4:33140861-33140880 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 33137390 | 33142013 | 33137390 | ID=MS.gene052374 |
| chr4.4 | mRNA | 33137390 | 33142013 | 33137390 | ID=MS.gene052374.t1;Parent=MS.gene052374 |
| chr4.4 | exon | 33141619 | 33142013 | 33141619 | ID=MS.gene052374.t1.exon1;Parent=MS.gene052374.t1 |
| chr4.4 | CDS | 33141619 | 33142013 | 33141619 | ID=cds.MS.gene052374.t1;Parent=MS.gene052374.t1 |
| chr4.4 | exon | 33140938 | 33141054 | 33140938 | ID=MS.gene052374.t1.exon2;Parent=MS.gene052374.t1 |
| chr4.4 | CDS | 33140938 | 33141054 | 33140938 | ID=cds.MS.gene052374.t1;Parent=MS.gene052374.t1 |
| chr4.4 | exon | 33139888 | 33140037 | 33139888 | ID=MS.gene052374.t1.exon3;Parent=MS.gene052374.t1 |
| chr4.4 | CDS | 33139888 | 33140037 | 33139888 | ID=cds.MS.gene052374.t1;Parent=MS.gene052374.t1 |
| chr4.4 | exon | 33139594 | 33139802 | 33139594 | ID=MS.gene052374.t1.exon4;Parent=MS.gene052374.t1 |
| chr4.4 | CDS | 33139594 | 33139802 | 33139594 | ID=cds.MS.gene052374.t1;Parent=MS.gene052374.t1 |
| chr4.4 | exon | 33138311 | 33138461 | 33138311 | ID=MS.gene052374.t1.exon5;Parent=MS.gene052374.t1 |
| chr4.4 | CDS | 33138311 | 33138461 | 33138311 | ID=cds.MS.gene052374.t1;Parent=MS.gene052374.t1 |
| chr4.4 | exon | 33137390 | 33137639 | 33137390 | ID=MS.gene052374.t1.exon6;Parent=MS.gene052374.t1 |
| chr4.4 | CDS | 33137390 | 33137639 | 33137390 | ID=cds.MS.gene052374.t1;Parent=MS.gene052374.t1 |
| Gene Sequence |
| Protein sequence |
