AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene05242

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05242.t1 MTR_6g078450 85.475 358 52 0 47 404 124 481 0.0 659
MS.gene05242.t1 MTR_6g078380 87.778 360 43 1 47 405 124 483 0.0 649
MS.gene05242.t1 MTR_6g078450 85.629 334 48 0 47 380 124 457 0.0 616
MS.gene05242.t1 MTR_6g078330 77.591 357 80 0 47 403 125 481 0.0 602
MS.gene05242.t1 MTR_6g078330 77.591 357 80 0 47 403 21 377 0.0 602
MS.gene05242.t1 MTR_6g078330 74.271 377 94 1 27 403 4 377 0.0 600
MS.gene05242.t1 MTR_2g098790 69.832 358 108 0 47 404 126 483 0.0 545
MS.gene05242.t1 MTR_3g028720 69.553 358 109 0 47 404 126 483 0.0 545
MS.gene05242.t1 MTR_4g066580 70.028 357 107 0 48 404 128 484 0.0 545
MS.gene05242.t1 MTR_2g098540 69.832 358 108 0 47 404 119 476 0.0 545
MS.gene05242.t1 MTR_2g098540 69.832 358 108 0 47 404 75 432 0.0 543
MS.gene05242.t1 MTR_2g098520 69.638 359 109 0 47 405 122 480 0.0 543
MS.gene05242.t1 MTR_4g066340 68.994 358 111 0 47 404 51 408 0.0 531
MS.gene05242.t1 MTR_4g066210 67.598 358 116 0 47 404 131 488 0.0 528
MS.gene05242.t1 MTR_4g066240 67.598 358 116 0 47 404 124 481 0.0 525
MS.gene05242.t1 MTR_4g066590 67.222 360 117 1 45 404 120 478 0.0 525
MS.gene05242.t1 MTR_4g066630 66.480 358 120 0 47 404 127 484 0.0 521
MS.gene05242.t1 MTR_4g066240 67.409 359 116 1 47 404 124 482 0.0 521
MS.gene05242.t1 MTR_3g028720 69.461 334 102 0 47 380 126 459 1.43e-178 506
MS.gene05242.t1 MTR_5g071520 66.120 366 115 1 48 404 128 493 3.85e-173 494
MS.gene05242.t1 MTR_4g066630 66.066 333 113 0 47 379 127 459 1.63e-169 483
MS.gene05242.t1 MTR_4g066640 61.560 359 134 2 47 404 127 482 5.86e-169 483
MS.gene05242.t1 MTR_4g066330 63.510 359 103 3 47 403 129 461 1.48e-166 477
MS.gene05242.t1 MTR_4g066580 71.761 301 85 0 48 348 128 428 7.99e-163 465
MS.gene05242.t1 MTR_3g028720 71.812 298 84 0 47 344 126 423 1.65e-162 464
MS.gene05242.t1 MTR_4g066280 61.111 360 112 3 47 404 129 462 4.08e-162 465
MS.gene05242.t1 MTR_4g066630 68.456 298 94 0 47 344 127 424 2.85e-155 446
MS.gene05242.t1 MTR_3g026280 59.104 357 141 2 48 404 111 462 2.91e-153 443
MS.gene05242.t1 MTR_6g078330 78.261 253 55 0 47 299 125 377 1.14e-150 432
MS.gene05242.t1 MTR_4g066240 66.779 298 99 0 47 344 124 421 1.53e-149 431
MS.gene05242.t1 MTR_4g067040 68.056 288 91 1 45 332 121 407 2.24e-147 424
MS.gene05242.t1 MTR_4g023000 56.145 358 151 3 47 404 112 463 5.15e-146 424
MS.gene05242.t1 MTR_3g028720 71.648 261 74 0 47 307 126 386 3.85e-142 411
MS.gene05242.t1 MTR_3g026400 54.039 359 159 4 47 404 94 447 3.85e-139 406
MS.gene05242.t1 MTR_3g026400 54.039 359 159 4 47 404 125 478 5.69e-139 407
MS.gene05242.t1 MTR_4g067040 70.342 263 77 1 45 307 121 382 2.38e-138 401
MS.gene05242.t1 MTR_4g015420 53.930 369 131 6 48 404 153 494 2.93e-132 390
MS.gene05242.t1 MTR_4g066630 68.898 254 79 0 47 300 127 380 4.25e-132 385
MS.gene05242.t1 MTR_4g083000 52.528 356 167 1 52 405 24 379 6.66e-132 385
MS.gene05242.t1 MTR_2g043200 53.846 364 135 4 47 404 152 488 1.31e-131 389
MS.gene05242.t1 MTR_4g083000 52.528 356 167 1 52 405 118 473 2.85e-131 387
MS.gene05242.t1 MTR_3g026620 53.352 358 163 3 47 404 126 479 4.02e-129 382
MS.gene05242.t1 MTR_5g044000 52.661 357 166 3 52 405 136 492 7.01e-127 377
MS.gene05242.t1 MTR_0110s0040 51.130 354 170 2 52 405 133 483 2.23e-123 367
MS.gene05242.t1 MTR_4g015460 52.589 367 137 6 48 404 130 469 7.06e-123 366
MS.gene05242.t1 MTR_4g081530 51.966 356 168 2 52 404 114 469 5.05e-122 364
MS.gene05242.t1 MTR_0110s0030 50.000 354 174 2 52 405 133 483 7.75e-121 361
MS.gene05242.t1 MTR_4g066640 61.278 266 99 2 47 311 127 389 1.99e-120 355
MS.gene05242.t1 MTR_4g131810 46.814 361 188 3 47 404 116 475 2.02e-114 345
MS.gene05242.t1 MTR_3g033790 47.042 355 176 3 50 404 108 450 7.35e-113 340
MS.gene05242.t1 MTR_3g033810 47.887 355 174 2 50 404 110 453 2.91e-112 338
MS.gene05242.t1 MTR_2g079580 45.810 358 186 3 50 403 121 474 1.37e-109 332
MS.gene05242.t1 MTR_2g079550 45.787 356 185 3 52 403 121 472 1.02e-107 328
MS.gene05242.t1 MTR_2g022760 45.304 362 190 5 47 404 21 378 1.57e-105 318
MS.gene05242.t1 MTR_2g022760 45.304 362 190 5 47 404 124 481 3.41e-104 318
MS.gene05242.t1 MTR_4g131800 46.537 361 187 6 47 404 603 960 2.87e-103 329
MS.gene05242.t1 MTR_2g022710 43.056 360 201 3 47 404 21 378 9.91e-102 308
MS.gene05242.t1 MTR_2g022710 43.056 360 201 3 47 404 122 479 2.78e-100 308
MS.gene05242.t1 MTR_7g033860 40.887 406 219 9 4 404 93 482 1.08e-96 299
MS.gene05242.t1 MTR_4g016920 43.137 357 189 4 52 406 24 368 1.09e-96 296
MS.gene05242.t1 MTR_7g068910 43.258 356 190 3 52 406 121 465 3.02e-96 298
MS.gene05242.t1 MTR_7g068910 43.258 356 190 3 52 406 131 475 3.73e-96 298
MS.gene05242.t1 MTR_3g026400 58.696 230 92 2 47 276 125 351 9.92e-96 292
MS.gene05242.t1 MTR_4g016920 43.137 357 189 4 52 406 117 461 1.60e-95 296
MS.gene05242.t1 MTR_7g068900 42.857 357 191 3 52 406 45 390 4.24e-95 294
MS.gene05242.t1 MTR_0108s0030 39.801 402 211 6 4 404 48 419 7.09e-95 292
MS.gene05242.t1 MTR_2g079580 46.823 299 151 3 50 344 121 415 1.00e-92 285
MS.gene05242.t1 MTR_7g051610 42.416 389 207 8 19 404 128 502 1.68e-89 281
MS.gene05242.t1 MTR_7g051510 44.505 364 182 9 45 404 155 502 3.12e-89 280
MS.gene05242.t1 MTR_5g068740 41.341 358 193 5 52 405 115 459 3.35e-89 280
MS.gene05242.t1 MTR_7g051650 43.681 364 186 6 45 404 151 499 3.77e-88 277
MS.gene05242.t1 MTR_7g051650 43.681 364 186 6 45 404 155 503 5.89e-88 277
MS.gene05242.t1 MTR_2g022710 41.667 336 192 3 47 380 122 455 3.10e-87 273
MS.gene05242.t1 MTR_1g088610 40.720 361 190 5 52 405 115 458 6.32e-87 277
MS.gene05242.t1 MTR_2g022710 41.667 336 192 3 47 380 122 455 6.88e-87 272
MS.gene05242.t1 MTR_7g056747 39.487 390 204 6 21 404 5 368 2.40e-83 261
MS.gene05242.t1 MTR_0110s0040 51.452 241 116 1 52 292 133 372 4.50e-83 260
MS.gene05242.t1 MTR_4g016920 49.194 248 125 1 52 298 24 271 8.70e-83 256
MS.gene05242.t1 MTR_2g022710 43.333 300 166 3 47 344 122 419 9.25e-83 260
MS.gene05242.t1 MTR_1g088630 38.781 361 173 7 52 405 83 402 1.33e-77 248
MS.gene05242.t1 MTR_2g022710 42.657 286 160 3 47 330 122 405 9.87e-77 244
MS.gene05242.t1 MTR_2g022710 43.726 263 144 3 47 307 122 382 9.87e-70 226
MS.gene05242.t1 MTR_1g088630 42.742 248 116 4 52 297 115 338 3.47e-61 202
MS.gene05242.t1 MTR_1g088630 49.714 175 87 1 52 225 115 289 1.70e-52 178
MS.gene05242.t1 MTR_0110s0020 51.351 148 71 1 52 199 133 279 8.66e-47 163
MS.gene05242.t1 MTR_5g069350 44.056 143 40 4 273 399 48 166 2.52e-24 99.8
MS.gene05242.t1 MTR_8g038650 41.525 118 59 1 173 280 35 152 1.05e-23 97.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05242.t1 AT2G44480 54.902 357 160 1 47 403 21 376 5.72e-146 421
MS.gene05242.t1 AT2G44480 54.902 357 160 1 47 403 123 478 4.06e-145 423
MS.gene05242.t1 AT2G44480 54.902 357 160 1 47 403 154 509 1.56e-144 422
MS.gene05242.t1 AT2G44450 54.469 358 158 2 47 404 119 471 1.71e-144 421
MS.gene05242.t1 AT5G44640 54.318 359 158 3 47 404 119 472 7.51e-144 419
MS.gene05242.t1 AT5G42260 55.056 356 154 3 50 404 122 472 1.15e-143 419
MS.gene05242.t1 AT3G60130 54.039 359 159 3 47 404 66 419 2.77e-138 404
MS.gene05242.t1 AT3G60130 54.039 359 159 3 47 404 118 471 1.34e-137 404
MS.gene05242.t1 AT1G47600 54.039 359 156 4 47 404 130 480 2.20e-133 393
MS.gene05242.t1 AT1G51470 54.318 359 155 4 47 404 130 480 2.61e-133 392
MS.gene05242.t1 AT1G47600 53.482 359 157 4 47 404 130 479 2.85e-132 390
MS.gene05242.t1 AT3G60130 51.811 359 156 4 47 404 66 408 4.07e-129 380
MS.gene05242.t1 AT2G25630 50.975 359 153 4 47 404 118 454 2.09e-128 379
MS.gene05242.t1 AT2G44450 53.538 325 146 2 80 404 1 320 1.28e-127 372
MS.gene05242.t1 AT1G26560 51.261 357 171 2 52 405 122 478 1.33e-127 378
MS.gene05242.t1 AT5G25980 50.833 360 172 5 47 404 136 492 3.98e-124 370
MS.gene05242.t1 AT5G54570 49.444 360 171 3 52 404 24 379 5.04e-123 364
MS.gene05242.t1 AT5G54570 49.444 360 171 3 52 404 121 476 3.86e-122 365
MS.gene05242.t1 AT5G24550 47.368 361 186 3 48 404 120 480 8.53e-122 364
MS.gene05242.t1 AT3G60140 48.066 362 183 4 48 405 114 474 6.04e-121 363
MS.gene05242.t1 AT5G26000 50.964 363 168 6 47 404 124 481 2.09e-119 358
MS.gene05242.t1 AT3G18080 49.577 355 175 3 52 405 129 480 1.03e-115 348
MS.gene05242.t1 AT5G25980 50.448 335 162 4 47 380 136 467 6.93e-115 344
MS.gene05242.t1 AT5G25980 50.448 335 162 4 47 380 136 467 6.93e-115 344
MS.gene05242.t1 AT5G24540 47.790 362 183 4 48 404 120 480 1.65e-114 345
MS.gene05242.t1 AT2G44460 49.036 363 177 6 48 405 117 476 4.93e-114 345
MS.gene05242.t1 AT3G60120 48.056 360 181 5 48 403 102 459 8.91e-114 343
MS.gene05242.t1 AT3G18070 47.472 356 173 5 52 405 120 463 2.45e-111 336
MS.gene05242.t1 AT5G54570 48.358 335 163 2 52 380 121 451 4.26e-111 334
MS.gene05242.t1 AT3G18070 47.472 356 179 5 52 405 120 469 9.32e-111 335
MS.gene05242.t1 AT2G44470 45.179 363 192 5 48 405 117 477 9.49e-111 337
MS.gene05242.t1 AT5G36890 44.681 376 195 3 30 404 87 450 9.69e-111 334
MS.gene05242.t1 AT5G36890 44.681 376 195 3 30 404 87 450 1.57e-110 333
MS.gene05242.t1 AT5G26000 50.592 338 158 5 47 380 124 456 7.53e-110 331
MS.gene05242.t1 AT1G61820 45.225 356 189 4 52 403 122 475 9.45e-105 320
MS.gene05242.t1 AT3G21370 44.932 365 192 6 48 405 121 483 1.83e-104 319
MS.gene05242.t1 AT2G32860 45.125 359 193 4 48 403 183 540 4.01e-104 321
MS.gene05242.t1 AT2G32860 44.568 359 196 3 48 403 183 541 9.00e-104 320
MS.gene05242.t1 AT5G28510 45.205 365 189 6 48 403 127 489 1.12e-103 317
MS.gene05242.t1 AT3G03640 44.118 374 200 6 48 414 123 494 3.23e-103 316
MS.gene05242.t1 AT4G27830 45.378 357 181 3 52 406 24 368 5.13e-103 312
MS.gene05242.t1 AT5G24540 46.726 336 174 3 48 379 120 454 8.40e-103 313
MS.gene05242.t1 AT4G21760 42.257 381 208 6 27 404 122 493 1.15e-102 315
MS.gene05242.t1 AT2G44460 48.649 333 163 6 78 405 1 330 4.58e-102 310
MS.gene05242.t1 AT2G44490 44.475 362 193 6 48 403 103 462 5.09e-102 314
MS.gene05242.t1 AT1G61810 43.539 356 195 4 52 403 25 378 6.38e-102 309
MS.gene05242.t1 AT3G09260 44.444 360 194 5 48 403 123 480 6.64e-102 313
MS.gene05242.t1 AT4G27830 45.378 357 181 3 52 406 112 456 6.91e-102 312
MS.gene05242.t1 AT1G75940 45.380 368 188 7 48 405 125 489 1.71e-101 312
MS.gene05242.t1 AT1G61810 43.539 356 195 4 52 403 125 478 8.10e-101 310
MS.gene05242.t1 AT1G61810 43.539 356 195 4 52 403 125 478 9.14e-101 310
MS.gene05242.t1 AT2G44470 44.048 336 182 4 48 379 117 450 1.70e-99 304
MS.gene05242.t1 AT4G27820 45.098 357 183 3 52 406 24 369 5.79e-99 301
MS.gene05242.t1 AT4G27820 45.098 357 183 3 52 406 24 369 5.79e-99 301
MS.gene05242.t1 AT3G60140 47.134 314 160 4 48 358 114 424 2.23e-98 301
MS.gene05242.t1 AT1G02850 44.101 356 186 3 52 406 114 457 3.08e-98 302
MS.gene05242.t1 AT4G27820 45.098 357 183 3 52 406 109 454 7.42e-98 301
MS.gene05242.t1 AT1G61820 44.478 335 180 4 73 403 4 336 3.74e-97 295
MS.gene05242.t1 AT1G52400 44.414 367 189 9 48 405 127 487 5.10e-97 300
MS.gene05242.t1 AT1G52400 44.414 367 189 9 48 405 127 487 5.10e-97 300
MS.gene05242.t1 AT2G44480 51.471 272 131 1 132 403 2 272 5.72e-97 293
MS.gene05242.t1 AT1G66280 45.706 361 187 6 48 403 124 480 9.68e-97 299
MS.gene05242.t1 AT4G21760 41.207 381 202 7 27 404 122 483 1.35e-95 296
MS.gene05242.t1 AT1G66270 45.429 361 188 6 48 403 124 480 3.43e-95 295
MS.gene05242.t1 AT3G18070 48.185 303 151 4 105 405 94 392 4.12e-94 289
MS.gene05242.t1 AT5G48375 43.182 352 141 5 55 401 118 415 1.41e-93 288
MS.gene05242.t1 AT1G02850 41.689 379 185 4 52 406 114 480 2.43e-93 290
MS.gene05242.t1 AT1G66270 45.152 361 187 7 48 403 124 478 3.49e-92 287
MS.gene05242.t1 AT1G02850 41.842 380 184 5 52 406 114 481 6.90e-92 286
MS.gene05242.t1 AT2G44480 56.951 223 94 2 47 269 154 374 8.53e-91 280
MS.gene05242.t1 AT4G22100 42.179 358 193 6 52 406 108 454 8.08e-89 278
MS.gene05242.t1 AT3G62750 40.947 359 186 5 52 406 24 360 1.38e-88 275
MS.gene05242.t1 AT3G62750 40.947 359 186 5 52 406 24 360 1.38e-88 275
MS.gene05242.t1 AT3G18070 48.239 284 141 4 124 405 1 280 1.92e-87 268
MS.gene05242.t1 AT3G62750 40.947 359 186 5 52 406 109 445 2.08e-87 274
MS.gene05242.t1 AT1G02850 41.854 356 167 4 52 406 114 430 3.22e-87 273
MS.gene05242.t1 AT3G62750 40.947 359 186 5 52 406 135 471 4.83e-87 274
MS.gene05242.t1 AT3G62740 40.223 358 194 6 52 406 110 450 2.71e-86 271
MS.gene05242.t1 AT1G45191 41.061 358 197 6 52 406 115 461 6.85e-85 268
MS.gene05242.t1 AT1G60090 40.057 352 201 4 52 403 110 451 8.74e-85 268
MS.gene05242.t1 AT1G45191 41.551 361 196 7 52 406 115 466 1.04e-84 268
MS.gene05242.t1 AT1G52400 42.941 340 180 8 48 379 127 460 1.26e-84 266
MS.gene05242.t1 AT1G45191 41.551 361 196 7 52 406 127 478 1.53e-84 268
MS.gene05242.t1 AT1G45191 40.720 361 188 7 52 406 115 455 1.94e-84 267
MS.gene05242.t1 AT1G60090 39.503 362 196 6 52 403 110 458 1.99e-83 265
MS.gene05242.t1 AT1G02850 43.533 317 149 3 52 344 114 424 1.49e-81 257
MS.gene05242.t1 AT2G44470 46.154 247 130 2 48 292 117 362 1.65e-79 251
MS.gene05242.t1 AT3G62740 40.181 331 178 6 52 379 110 423 6.92e-78 248
MS.gene05242.t1 AT1G51490 47.940 267 127 5 47 311 105 361 1.93e-77 246
MS.gene05242.t1 AT1G61810 41.751 297 167 4 52 344 125 419 3.31e-77 246
MS.gene05242.t1 AT3G62750 39.701 335 176 5 52 382 135 447 1.24e-76 245
MS.gene05242.t1 AT1G60270 46.614 251 127 4 52 298 24 271 3.23e-71 226
MS.gene05242.t1 AT3G18070 47.414 232 118 3 52 283 120 347 9.35e-71 228
MS.gene05242.t1 AT1G60270 46.614 251 127 4 52 298 111 358 9.84e-70 225
MS.gene05242.t1 AT3G18070 45.679 243 128 3 105 345 94 334 2.75e-69 223
MS.gene05242.t1 AT1G45191 42.802 257 142 3 52 305 115 369 2.57e-67 220
MS.gene05242.t1 AT3G62750 45.415 229 116 2 52 280 109 328 3.71e-67 218
MS.gene05242.t1 AT3G62750 45.415 229 116 2 52 280 109 328 3.71e-67 218
MS.gene05242.t1 AT1G45191 40.541 296 157 6 52 341 115 397 5.49e-67 219
MS.gene05242.t1 AT3G62750 45.415 229 116 2 52 280 135 354 4.29e-66 217
MS.gene05242.t1 AT3G18070 45.536 224 118 3 124 345 1 222 9.17e-63 202
MS.gene05242.t1 AT1G61810 48.315 178 89 2 52 228 125 300 4.79e-53 179
MS.gene05242.t1 AT5G16580 39.519 291 153 7 105 390 27 299 1.69e-52 177
MS.gene05242.t1 AT3G06510 26.685 371 185 14 44 403 185 479 3.36e-19 90.5
MS.gene05242.t1 AT3G06510 26.963 382 204 16 44 403 185 513 3.74e-19 90.1

Find 107 sgRNAs with CRISPR-Local

Find 336 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGATCTATATCACTGAAAA+TGG 0.261422 6.2:+77917693 MS.gene05242:CDS
TCCCTAAGAGTACCGTTCTA+AGG 0.271624 6.2:-77918502 None:intergenic
GGGTGCATTAGTTGCATAAT+TGG 0.295441 6.2:-77916243 None:intergenic
GAGGAAGGTCCCAATGAAAA+AGG 0.297919 6.2:-77914650 None:intergenic
GCCACTCTATGATACAAAAT+TGG 0.298973 6.2:+77915828 MS.gene05242:CDS
GAAAGGGAATCGAACATTAT+TGG 0.305659 6.2:+77913512 MS.gene05242:CDS
AGAGCCATTGATTTCATGTT+TGG 0.306421 6.2:+77915868 MS.gene05242:CDS
GACAACTTTGAATGGGCTTC+AGG 0.310976 6.2:+77918237 MS.gene05242:CDS
GCCCTTAGAACGGTACTCTT+AGG 0.315503 6.2:+77918500 MS.gene05242:CDS
TAACCTCATCAATGAGCTTC+TGG 0.326995 6.2:+77914531 MS.gene05242:CDS
ACATCTCAACAGGGCAAGAT+AGG 0.328217 6.2:+77915778 MS.gene05242:CDS
CAAACTCTTGAAGAAGAATA+TGG 0.340474 6.2:+77914672 MS.gene05242:CDS
ATCTGTGATGTAGCTGGGTT+TGG 0.344206 6.2:-77916279 None:intergenic
TGATTATGAGCCGCGATATA+GGG 0.348212 6.2:-77914991 None:intergenic
GAAGATGATGATAATGGAAA+TGG 0.351149 6.2:+77913563 MS.gene05242:CDS
CAATCCTTTGTGTGTCTTCA+AGG 0.355425 6.2:-77918001 None:intergenic
ACATGCAGGCAGCTTCAAAA+TGG 0.356308 6.2:+77917604 MS.gene05242:intron
TGTCTACAAAACTAAGTATC+AGG 0.359104 6.2:+77915041 MS.gene05242:CDS
GATTGGTGGAGGTGTAAATA+AGG 0.373123 6.2:+77914489 MS.gene05242:CDS
GATGTCAATTACACTATATT+AGG 0.374691 6.2:-77914708 None:intergenic
TTGATTATGAGCCGCGATAT+AGG 0.376943 6.2:-77914992 None:intergenic
TTAATTGCAGAAGGAAAGAT+TGG 0.380831 6.2:+77914472 MS.gene05242:intron
GGGCTTCAGGCTACACTTCA+AGG 0.383399 6.2:+77918250 MS.gene05242:CDS
AAAGGGAATCGAACATTATT+GGG 0.383728 6.2:+77913513 MS.gene05242:CDS
ACTTGATATGTAGAAAACTT+TGG 0.393184 6.2:-77916170 None:intergenic
TTTATGGATCCATTGACAAT+AGG 0.394559 6.2:+77916104 MS.gene05242:CDS
GCACATACTGTTGGGCCAAT+AGG 0.399529 6.2:-77917454 None:intergenic
CATTGATTGACAACTTTGAA+TGG 0.402390 6.2:+77918229 MS.gene05242:CDS
AAAGAATACAATGATTCCTT+TGG 0.410721 6.2:+77913481 None:intergenic
TATCAAGTAAAGCTTGTAAG+AGG 0.412431 6.2:+77916185 MS.gene05242:CDS
GTATACACAGACATCTCAAC+AGG 0.414741 6.2:+77915768 MS.gene05242:intron
TATTCTTCTTCAAGAGTTTG+AGG 0.425331 6.2:-77914669 None:intergenic
GGGTTTGGCTTCACTTAACT+CGG 0.442075 6.2:-77916264 None:intergenic
TTTCAGTGATATAGATCAAC+GGG 0.447228 6.2:-77917689 None:intergenic
GAACGGTACTCTTAGGGAAA+TGG 0.449599 6.2:+77918507 MS.gene05242:CDS
CCCTTAGAACGGTACTCTTA+GGG 0.450962 6.2:+77918501 MS.gene05242:CDS
AGCTCCATGCGGTCCTTGGT+AGG 0.451981 6.2:+77916137 MS.gene05242:CDS
CCCTAGCTCCATGCGGTCCT+TGG 0.454487 6.2:+77916133 MS.gene05242:CDS
TCGAACATTATTGGGCTGAA+TGG 0.457707 6.2:+77913521 MS.gene05242:CDS
TCCATCAGCATAAGCATGCT+TGG 0.472004 6.2:-77914899 None:intergenic
ATTGATTGACAACTTTGAAT+GGG 0.477356 6.2:+77918230 MS.gene05242:CDS
AAGCGCAATGGAATACCTAT+TGG 0.478134 6.2:+77917439 MS.gene05242:CDS
AAGATGATGATAATGGAAAT+GGG 0.479035 6.2:+77913564 MS.gene05242:CDS
CAAAGGATTGATTACTATCA+TGG 0.481431 6.2:+77918014 MS.gene05242:CDS
CATCAATGAGCTTCTGGCCA+AGG 0.482325 6.2:+77914537 MS.gene05242:CDS
GGGGTAGAAGATGATGATAA+TGG 0.482590 6.2:+77913557 MS.gene05242:CDS
AATCCTTTGTGTGTCTTCAA+GGG 0.484608 6.2:-77918000 None:intergenic
TCCTTTGGTAGAAGATGAAA+GGG 0.485543 6.2:+77913496 MS.gene05242:CDS
TGGTTATCAATTTATCCAAA+GGG 0.494731 6.2:+77917624 MS.gene05242:CDS
TCCCTTTCATCTTCTACCAA+AGG 0.499283 6.2:-77913497 None:intergenic
AAGTGAATCTGTGATGTAGC+TGG 0.501010 6.2:-77916285 None:intergenic
GGGTAGTCTCCTATTGTCAA+TGG 0.501063 6.2:-77916113 None:intergenic
AATAGGTCATGAATTCCCTT+TGG 0.502202 6.2:-77917639 None:intergenic
TTCCTTTGGTAGAAGATGAA+AGG 0.503782 6.2:+77913495 MS.gene05242:CDS
CCATCCAAACATGAAATCAA+TGG 0.508555 6.2:-77915872 None:intergenic
CACTGTCAGGTTCTTCCTTG+AGG 0.510400 6.2:-77913610 None:intergenic
ATGGTTATCAATTTATCCAA+AGG 0.512637 6.2:+77917623 MS.gene05242:CDS
GCCAAGCATGCTTATGCTGA+TGG 0.514658 6.2:+77914898 MS.gene05242:CDS
ACCAAGGACCGCATGGAGCT+AGG 0.516896 6.2:-77916134 None:intergenic
GGGATGGTGCGAATGTGAAC+GGG 0.519031 6.2:+77918193 MS.gene05242:intron
CCCTAAGAGTACCGTTCTAA+GGG 0.521326 6.2:-77918501 None:intergenic
CTGAATGGAAGAAGCAAACA+TGG 0.522188 6.2:+77913536 MS.gene05242:CDS
CCAAGGACCGCATGGAGCTA+GGG 0.523458 6.2:-77916133 None:intergenic
CCATTGATTTCATGTTTGGA+TGG 0.528755 6.2:+77915872 MS.gene05242:CDS
GCTTTCTCAAGAGGGAGTGT+TGG 0.529097 6.2:-77917978 None:intergenic
TCAGGTTCTTCCTTGAGGTA+GGG 0.530615 6.2:-77913605 None:intergenic
GTCAGGTTCTTCCTTGAGGT+AGG 0.534826 6.2:-77913606 None:intergenic
TTCAGTGGCGGAATCTCCAC+CGG 0.537381 6.2:-77914968 None:intergenic
ATTGCAGAAGGAAAGATTGG+TGG 0.538980 6.2:+77914475 MS.gene05242:intron
TTGGAGATAGAGTAAAGCAT+TGG 0.540163 6.2:+77914848 MS.gene05242:CDS
AGGGATGGTGCGAATGTGAA+CGG 0.547980 6.2:+77918192 MS.gene05242:intron
TGCCAGGGTGAACATCGACC+AGG 0.548000 6.2:-77914931 None:intergenic
CTTCTTCAAGAGTTTGAGGA+AGG 0.549021 6.2:-77914665 None:intergenic
GCTCCATGCGGTCCTTGGTA+GGG 0.552456 6.2:+77916138 MS.gene05242:CDS
CTTCAAGGGCTTTCTCAAGA+GGG 0.553607 6.2:-77917986 None:intergenic
CATCTCAACAGGGCAAGATA+GGG 0.554782 6.2:+77915779 MS.gene05242:CDS
TCTTCAAGGGCTTTCTCAAG+AGG 0.557439 6.2:-77917987 None:intergenic
GCAGAAGGAAAGATTGGTGG+AGG 0.557751 6.2:+77914478 MS.gene05242:intron
ATCAATGAGCTTCTGGCCAA+GGG 0.562187 6.2:+77914538 MS.gene05242:CDS
GGTTTGGCTTCACTTAACTC+GGG 0.563688 6.2:-77916263 None:intergenic
GGTGGAGGTGTAAATAAGGA+AGG 0.565682 6.2:+77914493 MS.gene05242:CDS
TGGCAAAACTTGAATTGCAC+CGG 0.571341 6.2:+77914949 MS.gene05242:CDS
AATTGAAGCGCCCTACCTCA+AGG 0.576478 6.2:+77913595 MS.gene05242:CDS
GTTTAATCCAATAAAATCAA+AGG 0.577644 6.2:-77916210 None:intergenic
ATGTGAACGGGTACTTTGCA+TGG 0.582215 6.2:+77918205 MS.gene05242:CDS
GCATGCTTGGCAAAGCTCCA+TGG 0.583054 6.2:-77914886 None:intergenic
GCTAAATAGTGCCCTTAGAA+CGG 0.584170 6.2:+77918490 MS.gene05242:intron
AACATTAATGTGTCAGTGGA+TGG 0.588696 6.2:+77915804 MS.gene05242:CDS
CACCTGGTCGATGTTCACCC+TGG 0.589434 6.2:+77914929 MS.gene05242:CDS
ACTCCCTACCAAGGACCGCA+TGG 0.607116 6.2:-77916141 None:intergenic
CAAAACTTGAATTGCACCGG+TGG 0.620786 6.2:+77914952 MS.gene05242:CDS
TGGCCAGAAGCTCATTGATG+AGG 0.621990 6.2:-77914534 None:intergenic
ATCAAGTAAAGCTTGTAAGA+GGG 0.625020 6.2:+77916186 MS.gene05242:CDS
GGATAACATTAATGTGTCAG+TGG 0.627418 6.2:+77915800 MS.gene05242:CDS
GCTGATGGAAAGTTAGCACC+TGG 0.627941 6.2:+77914913 MS.gene05242:CDS
AGTGAATCTGTGATGTAGCT+GGG 0.637641 6.2:-77916284 None:intergenic
ACTCTTGAAGAAGAATATGG+TGG 0.648422 6.2:+77914675 MS.gene05242:CDS
GGATCACATTGAATGAACCA+TGG 0.651187 6.2:+77914869 MS.gene05242:CDS
CGCGATATAGGGTTCAGTGG+CGG 0.664027 6.2:-77914980 None:intergenic
TGAATGGAAGAAGCAAACAT+GGG 0.671389 6.2:+77913537 MS.gene05242:CDS
TGGTAATCGACTCCCTACCA+AGG 0.679691 6.2:-77916150 None:intergenic
AGCCGCGATATAGGGTTCAG+TGG 0.679947 6.2:-77914983 None:intergenic
AAGCCCTTGAAGACACACAA+AGG 0.680808 6.2:+77917997 MS.gene05242:CDS
CGCCACTGAACCCTATATCG+CGG 0.707233 6.2:+77914981 MS.gene05242:CDS
GAATGGAAGAAGCAAACATG+GGG 0.726561 6.2:+77913538 MS.gene05242:CDS
TATACACAGACATCTCAACA+GGG 0.741450 6.2:+77915769 MS.gene05242:intron
GAGACTACCCTAGCTCCATG+CGG 0.758435 6.2:+77916126 MS.gene05242:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATATTATAAATTTAT+AGG - chr6.2:77914433-77914452 None:intergenic 0.0%
!! ATTAATATTATAAATTTATA+GGG - chr6.2:77914432-77914451 None:intergenic 0.0%
!! AATTAAAATGTAAAAACATT+AGG - chr6.2:77917499-77917518 None:intergenic 10.0%
!! TACTGTATTATTAATATTAA+TGG - chr6.2:77916349-77916368 None:intergenic 10.0%
!! TATATTGTGAATTTATATAT+AGG + chr6.2:77917936-77917955 MS.gene05242:intron 10.0%
!!! AACTTTTTTTAAAAATAGTA+AGG - chr6.2:77914381-77914400 None:intergenic 10.0%
!!! GTTTTCATTTTATATTTTTT+TGG + chr6.2:77917550-77917569 MS.gene05242:intron 10.0%
!!! TATCGTTAATTTAATTTTTT+CGG - chr6.2:77918099-77918118 None:intergenic 10.0%
!!! TGTCTTTTTTTTTTTAATAT+TGG - chr6.2:77917207-77917226 None:intergenic 10.0%
!! AGTTACATTATTTAATGTTT+AGG - chr6.2:77915991-77916010 None:intergenic 15.0%
!! ATATAATGCTTATTTCAATT+AGG + chr6.2:77917528-77917547 MS.gene05242:intron 15.0%
!! ATTCTCTTATGATTATTATT+TGG + chr6.2:77913875-77913894 MS.gene05242:intron 15.0%
!! TACTTTGTAGATTATAATAA+TGG + chr6.2:77918282-77918301 MS.gene05242:intron 15.0%
!! TATACAAAGTAAAGAAAATA+AGG - chr6.2:77915753-77915772 None:intergenic 15.0%
!! TATATATGATAGTATATGAT+AGG + chr6.2:77915218-77915237 MS.gene05242:intron 15.0%
!! TCACTATTAATATTAACTTA+AGG + chr6.2:77914309-77914328 MS.gene05242:intron 15.0%
!! TTATGATTATTATTTGGAAA+TGG + chr6.2:77913881-77913900 MS.gene05242:intron 15.0%
!!! AATTTTATCCAAATTTTACA+AGG + chr6.2:77918172-77918191 MS.gene05242:intron 15.0%
!!! ATTTTATCCAAATTTTACAA+GGG + chr6.2:77918173-77918192 MS.gene05242:intron 15.0%
!!! ATTTTTTAAGGAGTTTATTT+TGG - chr6.2:77915608-77915627 None:intergenic 15.0%
!!! CTTTTTAAAAAATGTATTGT+AGG + chr6.2:77916081-77916100 MS.gene05242:intron 15.0%
!!! TTTTACAAGTACAAAAATAA+TGG - chr6.2:77916773-77916792 None:intergenic 15.0%
!!! TTTTTTAAGGAGTTTATTTT+GGG - chr6.2:77915607-77915626 None:intergenic 15.0%
!!! TTTTTTTTATTACAATTGCA+TGG + chr6.2:77914158-77914177 MS.gene05242:intron 15.0%
!! AAAAATGTATTGTAGGTTTA+TGG + chr6.2:77916088-77916107 MS.gene05242:intron 20.0%
!! AAAGTACAATAAAAGAATCT+AGG + chr6.2:77916790-77916809 MS.gene05242:intron 20.0%
!! AAATGAGAGATAACAAAATA+TGG - chr6.2:77913951-77913970 None:intergenic 20.0%
!! AACGATATCTTTGTAATTTA+TGG + chr6.2:77918112-77918131 MS.gene05242:intron 20.0%
!! AAGTACAATAAAAGAATCTA+GGG + chr6.2:77916791-77916810 MS.gene05242:intron 20.0%
!! AATGAGAGATAACAAAATAT+GGG - chr6.2:77913950-77913969 None:intergenic 20.0%
!! AATTGATTGAGAATTGTTTA+AGG + chr6.2:77913689-77913708 MS.gene05242:intron 20.0%
!! ATAATTATTAACTAGCTAGT+AGG + chr6.2:77917289-77917308 MS.gene05242:intron 20.0%
!! GTTTAATCCAATAAAATCAA+AGG - chr6.2:77916213-77916232 None:intergenic 20.0%
!! GTTTATACTCAAATTTAGAT+AGG + chr6.2:77917782-77917801 MS.gene05242:intron 20.0%
!! TAATCAAATATCATGAAGTT+AGG + chr6.2:77914746-77914765 MS.gene05242:intron 20.0%
!! TCATGATATTTGATTATCTT+TGG - chr6.2:77914742-77914761 None:intergenic 20.0%
!! TGAGTTTCACATATAATTTA+TGG - chr6.2:77915917-77915936 None:intergenic 20.0%
!! TGCATGGTTAATTAATAAAT+TGG + chr6.2:77914205-77914224 MS.gene05242:intron 20.0%
!!! AACATTAACCACTTATTTTA+TGG - chr6.2:77916554-77916573 None:intergenic 20.0%
!!! AAGACATTAAACTCTTTTAA+AGG + chr6.2:77915960-77915979 MS.gene05242:intron 20.0%
!!! ACATTAACCACTTATTTTAT+GGG - chr6.2:77916553-77916572 None:intergenic 20.0%
!!! GAACTTTGTTTTAAAGAATT+TGG + chr6.2:77914829-77914848 MS.gene05242:CDS 20.0%
!!! GTATATGTTTTATGTTTTCA+TGG + chr6.2:77916596-77916615 MS.gene05242:intron 20.0%
!!! TCTTCAAAGGTTATTTTTTA+AGG - chr6.2:77915620-77915639 None:intergenic 20.0%
!!! TCTTTCAATCTATTTCTTTA+AGG + chr6.2:77917741-77917760 MS.gene05242:intron 20.0%
!!! TTATTTTAATGTAGAGCAAT+AGG - chr6.2:77917659-77917678 None:intergenic 20.0%
! AAATGAAGAAGAAGTTCATA+TGG - chr6.2:77914569-77914588 None:intergenic 25.0%
! AATTAACGAAACCACAAAAA+TGG - chr6.2:77916680-77916699 None:intergenic 25.0%
! ACTTGATATGTAGAAAACTT+TGG - chr6.2:77916173-77916192 None:intergenic 25.0%
! AGATTGAAAGAAAATCTAGT+TGG - chr6.2:77917732-77917751 None:intergenic 25.0%
! ATGGTTATCAATTTATCCAA+AGG + chr6.2:77917623-77917642 MS.gene05242:CDS 25.0%
! ATTCCTTTATTAATTGCAGA+AGG + chr6.2:77914463-77914482 MS.gene05242:intron 25.0%
! ATTGATTGACAACTTTGAAT+GGG + chr6.2:77918230-77918249 MS.gene05242:CDS 25.0%
! CAAAAGATATCCAAAAATGT+CGG + chr6.2:77918308-77918327 MS.gene05242:intron 25.0%
! GATGAAGAAATACATAGTAT+TGG - chr6.2:77915703-77915722 None:intergenic 25.0%
! GATGTCAATTACACTATATT+AGG - chr6.2:77914711-77914730 None:intergenic 25.0%
! TATAAACCAATGCTTAACTT+TGG - chr6.2:77917769-77917788 None:intergenic 25.0%
! TATATATGTCTGAAAATCAG+TGG - chr6.2:77914109-77914128 None:intergenic 25.0%
! TGGTTATCAATTTATCCAAA+GGG + chr6.2:77917624-77917643 MS.gene05242:CDS 25.0%
! TGTGAATTTATATATAGGCA+TGG + chr6.2:77917941-77917960 MS.gene05242:intron 25.0%
! TTGATCTATATCACTGAAAA+TGG + chr6.2:77917693-77917712 MS.gene05242:CDS 25.0%
! TTGATTATCTTTGGTCATAT+GGG - chr6.2:77914733-77914752 None:intergenic 25.0%
! TTTCCTTCTGCAATTAATAA+AGG - chr6.2:77914469-77914488 None:intergenic 25.0%
! TTTGATTATCTTTGGTCATA+TGG - chr6.2:77914734-77914753 None:intergenic 25.0%
!! AAAGAATAGCCTTAATTAAG+TGG - chr6.2:77915661-77915680 None:intergenic 25.0%
!! AATTTATAGGGTGTCTAATA+TGG - chr6.2:77914420-77914439 None:intergenic 25.0%
!! AATTTTTATGCTAACCACTT+TGG - chr6.2:77915380-77915399 None:intergenic 25.0%
!! ACTCTTTTATTAGATGCAAA+TGG - chr6.2:77917870-77917889 None:intergenic 25.0%
!! GTTAATGTTTTACGTTTTGA+TGG + chr6.2:77916565-77916584 MS.gene05242:intron 25.0%
!! TAAGGTATCAATAGTGAATA+TGG - chr6.2:77915735-77915754 None:intergenic 25.0%
!! TTAATTTTCCAATCCATTGA+AGG + chr6.2:77915343-77915362 MS.gene05242:intron 25.0%
!! TTGATTTGAATATGCAAACA+AGG - chr6.2:77913649-77913668 None:intergenic 25.0%
!! TTGTAACTGTTTTATGTTGT+AGG - chr6.2:77918353-77918372 None:intergenic 25.0%
!! TTTATGTTTTCATGGTTAGT+GGG + chr6.2:77916604-77916623 MS.gene05242:intron 25.0%
!! TTTTATGTTTTCATGGTTAG+TGG + chr6.2:77916603-77916622 MS.gene05242:intron 25.0%
!! TTTTCAGTGATATAGATCAA+CGG - chr6.2:77917693-77917712 None:intergenic 25.0%
!!! AAGATGATGATAATGGAAAT+GGG + chr6.2:77913564-77913583 MS.gene05242:CDS 25.0%
!!! ACATTTTTGGATATCTTTTG+AGG - chr6.2:77918308-77918327 None:intergenic 25.0%
!!! CCTTGAGAATTTTTTTGAAT+CGG + chr6.2:77916834-77916853 MS.gene05242:intron 25.0%
!!! GTTAATATCATCCATTTTTG+TGG + chr6.2:77916666-77916685 MS.gene05242:intron 25.0%
AAAGGGAATCGAACATTATT+GGG + chr6.2:77913513-77913532 MS.gene05242:CDS 30.0%
AAATATGTATGAGTTGCATC+AGG + chr6.2:77915539-77915558 MS.gene05242:intron 30.0%
ATCAAGTAAAGCTTGTAAGA+GGG + chr6.2:77916186-77916205 MS.gene05242:CDS 30.0%
ATCAATTGCTATGTCAATGT+AGG + chr6.2:77914609-77914628 MS.gene05242:intron 30.0%
ATCTTGACCAAAATATTAGG+GGG - chr6.2:77914083-77914102 None:intergenic 30.0%
ATTAAACTCCTTCAATGGAT+TGG - chr6.2:77915354-77915373 None:intergenic 30.0%
ATTATTAACTAGCTAGTAGG+AGG + chr6.2:77917292-77917311 MS.gene05242:intron 30.0%
CAAACTCTTGAAGAAGAATA+TGG + chr6.2:77914672-77914691 MS.gene05242:CDS 30.0%
CAAAGGATTGATTACTATCA+TGG + chr6.2:77918014-77918033 MS.gene05242:CDS 30.0%
CCGATTCAAAAAAATTCTCA+AGG - chr6.2:77916837-77916856 None:intergenic 30.0%
CTCTAACTATGATTATATCC+AGG + chr6.2:77914785-77914804 MS.gene05242:intron 30.0%
CTGGATATAATCATAGTTAG+AGG - chr6.2:77914787-77914806 None:intergenic 30.0%
GATCTTGACCAAAATATTAG+GGG - chr6.2:77914084-77914103 None:intergenic 30.0%
GGATCTTGACCAAAATATTA+GGG - chr6.2:77914085-77914104 None:intergenic 30.0%
GTAAATAGCAGTAGTAATAG+TGG + chr6.2:77913838-77913857 MS.gene05242:intron 30.0%
TACACCATTAACCACAAAAA+TGG - chr6.2:77916734-77916753 None:intergenic 30.0%
TAGGAAATCCTTAAACCAAA+TGG - chr6.2:77918334-77918353 None:intergenic 30.0%
TATCAAGTAAAGCTTGTAAG+AGG + chr6.2:77916185-77916204 MS.gene05242:CDS 30.0%
TATTCTTCTTCAAGAGTTTG+AGG - chr6.2:77914672-77914691 None:intergenic 30.0%
TGTCTACAAAACTAAGTATC+AGG + chr6.2:77915041-77915060 MS.gene05242:CDS 30.0%
TTAATTGCAGAAGGAAAGAT+TGG + chr6.2:77914472-77914491 MS.gene05242:intron 30.0%
TTTATGGATCCATTGACAAT+AGG + chr6.2:77916104-77916123 MS.gene05242:CDS 30.0%
TTTCAGTGATATAGATCAAC+GGG - chr6.2:77917692-77917711 None:intergenic 30.0%
! AGAGTGTTTAGATATAGAGA+CGG + chr6.2:77917885-77917904 MS.gene05242:intron 30.0%
! CATTGATTGACAACTTTGAA+TGG + chr6.2:77918229-77918248 MS.gene05242:CDS 30.0%
! GAGAATTGTTTAAGGTTTGA+AGG + chr6.2:77913697-77913716 MS.gene05242:intron 30.0%
! TATCCAAATTTTACAAGGGA+TGG + chr6.2:77918177-77918196 MS.gene05242:intron 30.0%
! TCCAATTTTGTATCATAGAG+TGG - chr6.2:77915832-77915851 None:intergenic 30.0%
! TTATGTTTTCATGGTTAGTG+GGG + chr6.2:77916605-77916624 MS.gene05242:intron 30.0%
! TTGTTTAAGGTTTGAAGGTA+TGG + chr6.2:77913702-77913721 MS.gene05242:intron 30.0%
!! ATTGACTTCTAGAAGCTTTT+AGG + chr6.2:77917019-77917038 MS.gene05242:intron 30.0%
!! GAAGATGATGATAATGGAAA+TGG + chr6.2:77913563-77913582 MS.gene05242:CDS 30.0%
!! GCTAGCATTTATTGATTTCA+TGG + chr6.2:77914129-77914148 MS.gene05242:intron 30.0%
!! TCATCCATTTTTGTGGTTAA+TGG + chr6.2:77916727-77916746 MS.gene05242:intron 30.0%
!! TCTTTGTATTGTTGTTTCAC+CGG - chr6.2:77916902-77916921 None:intergenic 30.0%
!! TTACGTTTTGATGGTTAGTA+GGG + chr6.2:77916574-77916593 MS.gene05242:intron 30.0%
!! TTTACGTTTTGATGGTTAGT+AGG + chr6.2:77916573-77916592 MS.gene05242:intron 30.0%
!!! GTGCAAAGTTTTTAGTTTGA+GGG - chr6.2:77918077-77918096 None:intergenic 30.0%
AACATTAATGTGTCAGTGGA+TGG + chr6.2:77915804-77915823 MS.gene05242:CDS 35.0%
AATAGCTAGCCAAAGCATAA+AGG - chr6.2:77915187-77915206 None:intergenic 35.0%
AATAGGTCATGAATTCCCTT+TGG - chr6.2:77917642-77917661 None:intergenic 35.0%
AATCCTTTGTGTGTCTTCAA+GGG - chr6.2:77918003-77918022 None:intergenic 35.0%
AATTATCACGCACATACTGT+TGG - chr6.2:77917466-77917485 None:intergenic 35.0%
ACTCTTGAAGAAGAATATGG+TGG + chr6.2:77914675-77914694 MS.gene05242:CDS 35.0%
AGCTAGTAGGAGGAAAATTT+GGG + chr6.2:77917302-77917321 MS.gene05242:intron 35.0%
AGGGTTATAAATACCACTGT+TGG - chr6.2:77916941-77916960 None:intergenic 35.0%
AGTTCATATGGTATTACCCT+TGG - chr6.2:77914557-77914576 None:intergenic 35.0%
AGTTTACAACTAGCTGTTTG+AGG - chr6.2:77913815-77913834 None:intergenic 35.0%
ATAGCTAGCCAAAGCATAAA+GGG - chr6.2:77915186-77915205 None:intergenic 35.0%
ATATGTCTGAAAATCAGTGG+CGG - chr6.2:77914106-77914125 None:intergenic 35.0%
ATTATCACGCACATACTGTT+GGG - chr6.2:77917465-77917484 None:intergenic 35.0%
CAAAAACAAATGGCAAGGTA+GGG + chr6.2:77915137-77915156 MS.gene05242:intron 35.0%
CAATGAAAAAGGGTCACAAA+GGG - chr6.2:77914642-77914661 None:intergenic 35.0%
CCATCCAAACATGAAATCAA+TGG - chr6.2:77915875-77915894 None:intergenic 35.0%
CGGATCTTGACCAAAATATT+AGG - chr6.2:77914086-77914105 None:intergenic 35.0%
CTCAACCTTGCAAAAACAAA+TGG + chr6.2:77915127-77915146 MS.gene05242:intron 35.0%
GAAAGGGAATCGAACATTAT+TGG + chr6.2:77913512-77913531 MS.gene05242:CDS 35.0%
GAAATGTTAATCGATACCTC+CGG - chr6.2:77916062-77916081 None:intergenic 35.0%
GAACACTTTATAAGTGAGAG+AGG + chr6.2:77916526-77916545 MS.gene05242:intron 35.0%
GCCACTCTATGATACAAAAT+TGG + chr6.2:77915828-77915847 MS.gene05242:CDS 35.0%
GGATAACATTAATGTGTCAG+TGG + chr6.2:77915800-77915819 MS.gene05242:CDS 35.0%
GGGTTATAAATACCACTGTT+GGG - chr6.2:77916940-77916959 None:intergenic 35.0%
GTGAGTAATAAGTCTCACAT+TGG + chr6.2:77916486-77916505 MS.gene05242:intron 35.0%
TAACGCGAAAACCTTTATCA+CGG - chr6.2:77914254-77914273 None:intergenic 35.0%
TAGCTAGTAGGAGGAAAATT+TGG + chr6.2:77917301-77917320 MS.gene05242:intron 35.0%
TATACACAGACATCTCAACA+GGG + chr6.2:77915769-77915788 MS.gene05242:intron 35.0%
TATGGGCTTAACACATTTGT+TGG - chr6.2:77913933-77913952 None:intergenic 35.0%
TCAAACAGCTAGTTGTAAAC+TGG + chr6.2:77913814-77913833 MS.gene05242:intron 35.0%
TCCTTTGGTAGAAGATGAAA+GGG + chr6.2:77913496-77913515 MS.gene05242:CDS 35.0%
TCTCACATTGGATAGAAAAG+TGG + chr6.2:77916498-77916517 MS.gene05242:intron 35.0%
TGAATGGAAGAAGCAAACAT+GGG + chr6.2:77913537-77913556 MS.gene05242:CDS 35.0%
TGCTTACATACAGGAACATA+GGG - chr6.2:77917847-77917866 None:intergenic 35.0%
TGTTGGACTTAACACAATGT+GGG - chr6.2:77913916-77913935 None:intergenic 35.0%
TTCCTTTGGTAGAAGATGAA+AGG + chr6.2:77913495-77913514 MS.gene05242:CDS 35.0%
TTGGACTTCGTTGACATAAA+AGG + chr6.2:77917569-77917588 MS.gene05242:intron 35.0%
TTGGAGATAGAGTAAAGCAT+TGG + chr6.2:77914848-77914867 MS.gene05242:CDS 35.0%
TTGGGTGAACATATGAGTAT+GGG + chr6.2:77917320-77917339 MS.gene05242:intron 35.0%
TTGTTGGACTTAACACAATG+TGG - chr6.2:77913917-77913936 None:intergenic 35.0%
TTTGGGTGAACATATGAGTA+TGG + chr6.2:77917319-77917338 MS.gene05242:intron 35.0%
! AATAGCCTTAATTAAGTGGC+TGG - chr6.2:77915657-77915676 None:intergenic 35.0%
! TCTTGCTGTGTGTTAAACTA+AGG - chr6.2:77916379-77916398 None:intergenic 35.0%
!! AGAGCCATTGATTTCATGTT+TGG + chr6.2:77915868-77915887 MS.gene05242:CDS 35.0%
!! AGAGGGTCCTTTGATTTTAT+TGG + chr6.2:77916203-77916222 MS.gene05242:CDS 35.0%
!! CCATTGATTTCATGTTTGGA+TGG + chr6.2:77915872-77915891 MS.gene05242:CDS 35.0%
!! CTTTGTGACCCTTTTTCATT+GGG + chr6.2:77914641-77914660 MS.gene05242:CDS 35.0%
!!! GGTGCAAAGTTTTTAGTTTG+AGG - chr6.2:77918078-77918097 None:intergenic 35.0%
!!! TTTTTTACAGACAAGCGCAA+TGG + chr6.2:77917427-77917446 MS.gene05242:intron 35.0%
AACCGTCAATCTACTCCTAA+GGG - chr6.2:77917155-77917174 None:intergenic 40.0%
AAGCAAAAACAAGTCCACAG+AGG - chr6.2:77916961-77916980 None:intergenic 40.0%
AAGCGCAATGGAATACCTAT+TGG + chr6.2:77917439-77917458 MS.gene05242:CDS 40.0%
AAGTGAATCTGTGATGTAGC+TGG - chr6.2:77916288-77916307 None:intergenic 40.0%
AATACGTCCCCTTTATGCTT+TGG + chr6.2:77915175-77915194 MS.gene05242:intron 40.0%
AGCAAAAACAAGTCCACAGA+GGG - chr6.2:77916960-77916979 None:intergenic 40.0%
AGGAAGGTCCCAATGAAAAA+GGG - chr6.2:77914652-77914671 None:intergenic 40.0%
AGGAGTTTAATGTGCCAAAG+TGG + chr6.2:77915363-77915382 MS.gene05242:intron 40.0%
AGTGAATCTGTGATGTAGCT+GGG - chr6.2:77916287-77916306 None:intergenic 40.0%
ATCCAAAAATGTCGGCCATT+TGG + chr6.2:77918316-77918335 MS.gene05242:intron 40.0%
ATTGCAGAAGGAAAGATTGG+TGG + chr6.2:77914475-77914494 MS.gene05242:intron 40.0%
CAATCCTTTGTGTGTCTTCA+AGG - chr6.2:77918004-77918023 None:intergenic 40.0%
CACATTGGATAGAAAAGTGG+AGG + chr6.2:77916501-77916520 MS.gene05242:intron 40.0%
CCAATGAAAAAGGGTCACAA+AGG - chr6.2:77914643-77914662 None:intergenic 40.0%
CCTTGCAAAAACAAATGGCA+AGG + chr6.2:77915132-77915151 MS.gene05242:intron 40.0%
CTGAATGGAAGAAGCAAACA+TGG + chr6.2:77913536-77913555 MS.gene05242:CDS 40.0%
CTTATTACTCACACTTGCAG+AGG - chr6.2:77916478-77916497 None:intergenic 40.0%
CTTCTTCAAGAGTTTGAGGA+AGG - chr6.2:77914668-77914687 None:intergenic 40.0%
GAATGGAAGAAGCAAACATG+GGG + chr6.2:77913538-77913557 MS.gene05242:CDS 40.0%
GAGAGGACCCATAAAATAAG+TGG + chr6.2:77916543-77916562 MS.gene05242:intron 40.0%
GCAAAAACAAATGGCAAGGT+AGG + chr6.2:77915136-77915155 MS.gene05242:intron 40.0%
GCACCATCCCTTGTAAAATT+TGG - chr6.2:77918183-77918202 None:intergenic 40.0%
GCTAAATAGTGCCCTTAGAA+CGG + chr6.2:77918490-77918509 MS.gene05242:intron 40.0%
GGAACCTATATTACACATGC+AGG + chr6.2:77917590-77917609 MS.gene05242:intron 40.0%
GGATCACATTGAATGAACCA+TGG + chr6.2:77914869-77914888 MS.gene05242:CDS 40.0%
GGCACATTAAACTCCTTCAA+TGG - chr6.2:77915359-77915378 None:intergenic 40.0%
GGGGTAGAAGATGATGATAA+TGG + chr6.2:77913557-77913576 MS.gene05242:CDS 40.0%
GGGTGCATTAGTTGCATAAT+TGG - chr6.2:77916246-77916265 None:intergenic 40.0%
GTATACACAGACATCTCAAC+AGG + chr6.2:77915768-77915787 MS.gene05242:intron 40.0%
GTGCTTACATACAGGAACAT+AGG - chr6.2:77917848-77917867 None:intergenic 40.0%
GTGGTATTTATAACCCTCTG+TGG + chr6.2:77916944-77916963 MS.gene05242:intron 40.0%
GTGTTTAGATATAGAGACGG+CGG + chr6.2:77917888-77917907 MS.gene05242:intron 40.0%
TAACCTCATCAATGAGCTTC+TGG + chr6.2:77914531-77914550 MS.gene05242:CDS 40.0%
TAGCTAGCCAAAGCATAAAG+GGG - chr6.2:77915185-77915204 None:intergenic 40.0%
TCCCTTTCATCTTCTACCAA+AGG - chr6.2:77913500-77913519 None:intergenic 40.0%
TCGAACATTATTGGGCTGAA+TGG + chr6.2:77913521-77913540 MS.gene05242:CDS 40.0%
TGATTATGAGCCGCGATATA+GGG - chr6.2:77914994-77915013 None:intergenic 40.0%
TGCAAATGGTGCTTACATAC+AGG - chr6.2:77917856-77917875 None:intergenic 40.0%
TGGCAAAACTTGAATTGCAC+CGG + chr6.2:77914949-77914968 MS.gene05242:CDS 40.0%
TGTTTAGATATAGAGACGGC+GGG + chr6.2:77917889-77917908 MS.gene05242:intron 40.0%
TTGATTATGAGCCGCGATAT+AGG - chr6.2:77914995-77915014 None:intergenic 40.0%
! AACCAAATGGCCGACATTTT+TGG - chr6.2:77918321-77918340 None:intergenic 40.0%
! AACCTTTGAAGACGCTCTAA+GGG + chr6.2:77915628-77915647 MS.gene05242:intron 40.0%
! AAGGTGCCAAAGTTAAGCAT+TGG + chr6.2:77917760-77917779 MS.gene05242:intron 40.0%
! AATGTCGGCCATTTGGTTTA+AGG + chr6.2:77918323-77918342 MS.gene05242:intron 40.0%
! ACTTAAAGCACAGCTTGCTT+AGG - chr6.2:77916993-77917012 None:intergenic 40.0%
! ATAGTCTTGAAAGTCGTTCC+TGG - chr6.2:77914806-77914825 None:intergenic 40.0%
! CTTAAAGCACAGCTTGCTTA+GGG - chr6.2:77916992-77917011 None:intergenic 40.0%
! GATTGGTGGAGGTGTAAATA+AGG + chr6.2:77914489-77914508 MS.gene05242:CDS 40.0%
! GTTTGAAGGTATGGAGAGAA+GGG + chr6.2:77913711-77913730 MS.gene05242:intron 40.0%
! TAACCTTTGAAGACGCTCTA+AGG + chr6.2:77915627-77915646 MS.gene05242:intron 40.0%
! TTTGAAGGTATGGAGAGAAG+GGG + chr6.2:77913712-77913731 MS.gene05242:intron 40.0%
!! AAGCTTTTAGGAGACTGTTG+AGG + chr6.2:77917031-77917050 MS.gene05242:intron 40.0%
!! CCTTTGTGACCCTTTTTCAT+TGG + chr6.2:77914640-77914659 MS.gene05242:CDS 40.0%
!! GTGCAATTCAAGTTTTGCCA+GGG - chr6.2:77914949-77914968 None:intergenic 40.0%
!!! CCTTGCCATTTGTTTTTGCA+AGG - chr6.2:77915135-77915154 None:intergenic 40.0%
AAGCCCTTGAAGACACACAA+AGG + chr6.2:77917997-77918016 MS.gene05242:CDS 45.0%
ACATCTCAACAGGGCAAGAT+AGG + chr6.2:77915778-77915797 MS.gene05242:CDS 45.0%
ACATGCAGGCAGCTTCAAAA+TGG + chr6.2:77917604-77917623 MS.gene05242:intron 45.0%
AGTGATTCACGCTGAGAAGA+TGG + chr6.2:77918375-77918394 MS.gene05242:intron 45.0%
ATCAATGAGCTTCTGGCCAA+GGG + chr6.2:77914538-77914557 MS.gene05242:CDS 45.0%
ATCTGTGATGTAGCTGGGTT+TGG - chr6.2:77916282-77916301 None:intergenic 45.0%
ATGTGAACGGGTACTTTGCA+TGG + chr6.2:77918205-77918224 MS.gene05242:CDS 45.0%
CAAAACTTGAATTGCACCGG+TGG + chr6.2:77914952-77914971 MS.gene05242:CDS 45.0%
CACTGTTGGGATCATTCTCA+AGG - chr6.2:77916927-77916946 None:intergenic 45.0%
CATCTCAACAGGGCAAGATA+GGG + chr6.2:77915779-77915798 MS.gene05242:CDS 45.0%
CCCTTAGAACGGTACTCTTA+GGG + chr6.2:77918501-77918520 MS.gene05242:CDS 45.0%
CTTCAAGGGCTTTCTCAAGA+GGG - chr6.2:77917989-77918008 None:intergenic 45.0%
CTTGAGAATGATCCCAACAG+TGG + chr6.2:77916925-77916944 MS.gene05242:intron 45.0%
GAACCGTCAATCTACTCCTA+AGG - chr6.2:77917156-77917175 None:intergenic 45.0%
GAACGGTACTCTTAGGGAAA+TGG + chr6.2:77918507-77918526 MS.gene05242:CDS 45.0%
GACCAAAATATTAGGGGGAG+CGG - chr6.2:77914078-77914097 None:intergenic 45.0%
GAGGAAGGTCCCAATGAAAA+AGG - chr6.2:77914653-77914672 None:intergenic 45.0%
GCTGCCTGCATGTGTAATAT+AGG - chr6.2:77917597-77917616 None:intergenic 45.0%
GGGTAGTCTCCTATTGTCAA+TGG - chr6.2:77916116-77916135 None:intergenic 45.0%
GGTTGCCAGCCACTTAATTA+AGG + chr6.2:77915649-77915668 MS.gene05242:intron 45.0%
GTTGCGTCTTGCATGAGTTT+CGG - chr6.2:77916876-77916895 None:intergenic 45.0%
TCAAATCTTTCCCCACTGTC+AGG - chr6.2:77913626-77913645 None:intergenic 45.0%
TCAAGGAAGAACCTGACAGT+GGG + chr6.2:77913612-77913631 MS.gene05242:intron 45.0%
TCAGGCTACACTTCAAGGTT+TGG + chr6.2:77918255-77918274 MS.gene05242:intron 45.0%
TCAGGTTCTTCCTTGAGGTA+GGG - chr6.2:77913608-77913627 None:intergenic 45.0%
TCCATCAGCATAAGCATGCT+TGG - chr6.2:77914902-77914921 None:intergenic 45.0%
TCTTCAAGGGCTTTCTCAAG+AGG - chr6.2:77917990-77918009 None:intergenic 45.0%
TGTTTCCTTAACCAGTGCTC+CGG + chr6.2:77916040-77916059 MS.gene05242:intron 45.0%
! AACCCTTAGAGCGTCTTCAA+AGG - chr6.2:77915633-77915652 None:intergenic 45.0%
! GACAACTTTGAATGGGCTTC+AGG + chr6.2:77918237-77918256 MS.gene05242:CDS 45.0%
! GGGTTTGGCTTCACTTAACT+CGG - chr6.2:77916267-77916286 None:intergenic 45.0%
! GGTGGAGGTGTAAATAAGGA+AGG + chr6.2:77914493-77914512 MS.gene05242:CDS 45.0%
! GGTTTGAAGGTATGGAGAGA+AGG + chr6.2:77913710-77913729 MS.gene05242:intron 45.0%
! GGTTTGGCTTCACTTAACTC+GGG - chr6.2:77916266-77916285 None:intergenic 45.0%
! TACCGCTCCCCCTAATATTT+TGG + chr6.2:77914073-77914092 MS.gene05242:intron 45.0%
! TTGAAGGTATGGAGAGAAGG+GGG + chr6.2:77913713-77913732 MS.gene05242:intron 45.0%
!! CCCTAAGAGTACCGTTCTAA+GGG - chr6.2:77918504-77918523 None:intergenic 45.0%
!! CTTTTAGGAGACTGTTGAGG+CGG + chr6.2:77917034-77917053 MS.gene05242:intron 45.0%
!! GGTGCAATTCAAGTTTTGCC+AGG - chr6.2:77914950-77914969 None:intergenic 45.0%
!! TCCCTAAGAGTACCGTTCTA+AGG - chr6.2:77918505-77918524 None:intergenic 45.0%
!!! GAATTTTTAATAAAATTATA+TGG + chr6.2:77914010-77914029 MS.gene05242:intron 5.0%
!!! TTATATATAACTTTTTTTAA+GGG - chr6.2:77914350-77914369 None:intergenic 5.0%
!!! TTTATATATAACTTTTTTTA+AGG - chr6.2:77914351-77914370 None:intergenic 5.0%
AGGGATGGTGCGAATGTGAA+CGG + chr6.2:77918192-77918211 MS.gene05242:intron 50.0%
ATCAGGATGACGTGGCATTG+TGG + chr6.2:77915556-77915575 MS.gene05242:intron 50.0%
CAAGGAAGAACCTGACAGTG+GGG + chr6.2:77913613-77913632 MS.gene05242:intron 50.0%
CAATCTACTCCTAAGGGCCT+AGG - chr6.2:77917149-77917168 None:intergenic 50.0%
CACTGTCAGGTTCTTCCTTG+AGG - chr6.2:77913613-77913632 None:intergenic 50.0%
CATCAATGAGCTTCTGGCCA+AGG + chr6.2:77914537-77914556 MS.gene05242:CDS 50.0%
CTCAAGGAAGAACCTGACAG+TGG + chr6.2:77913611-77913630 MS.gene05242:intron 50.0%
GCACATACTGTTGGGCCAAT+AGG - chr6.2:77917457-77917476 None:intergenic 50.0%
GCAGAAGGAAAGATTGGTGG+AGG + chr6.2:77914478-77914497 MS.gene05242:intron 50.0%
GCCAAGCATGCTTATGCTGA+TGG + chr6.2:77914898-77914917 MS.gene05242:CDS 50.0%
GCCCTTAGAACGGTACTCTT+AGG + chr6.2:77918500-77918519 MS.gene05242:CDS 50.0%
GCTGATGGAAAGTTAGCACC+TGG + chr6.2:77914913-77914932 MS.gene05242:CDS 50.0%
GGCCCTTAGGAGTAGATTGA+CGG + chr6.2:77917150-77917169 MS.gene05242:intron 50.0%
GTCAGGTTCTTCCTTGAGGT+AGG - chr6.2:77913609-77913628 None:intergenic 50.0%
TCAGGATGACGTGGCATTGT+GGG + chr6.2:77915557-77915576 MS.gene05242:intron 50.0%
TCGCGAGACAACCGTGATAA+AGG + chr6.2:77914240-77914259 MS.gene05242:intron 50.0%
TGAGTTGCATCAGGATGACG+TGG + chr6.2:77915548-77915567 MS.gene05242:intron 50.0%
TGGCCAGAAGCTCATTGATG+AGG - chr6.2:77914537-77914556 None:intergenic 50.0%
! AATTGAAGCGCCCTACCTCA+AGG + chr6.2:77913595-77913614 MS.gene05242:CDS 50.0%
! GCTTTCTCAAGAGGGAGTGT+TGG - chr6.2:77917981-77918000 None:intergenic 50.0%
! TGGTAATCGACTCCCTACCA+AGG - chr6.2:77916153-77916172 None:intergenic 50.0%
AATCGATACCTCCGGAGCAC+TGG - chr6.2:77916054-77916073 None:intergenic 55.0%
AGCCGCGATATAGGGTTCAG+TGG - chr6.2:77914986-77915005 None:intergenic 55.0%
CGCCACTGAACCCTATATCG+CGG + chr6.2:77914981-77915000 MS.gene05242:CDS 55.0%
CGCGATATAGGGTTCAGTGG+CGG - chr6.2:77914983-77915002 None:intergenic 55.0%
GAGACTACCCTAGCTCCATG+CGG + chr6.2:77916126-77916145 MS.gene05242:CDS 55.0%
GCATGCTTGGCAAAGCTCCA+TGG - chr6.2:77914889-77914908 None:intergenic 55.0%
GGGATGGTGCGAATGTGAAC+GGG + chr6.2:77918193-77918212 MS.gene05242:intron 55.0%
GGGCTTCAGGCTACACTTCA+AGG + chr6.2:77918250-77918269 MS.gene05242:CDS 55.0%
TCATGCAAGACGCAACGAGC+CGG + chr6.2:77916880-77916899 MS.gene05242:intron 55.0%
TTCCTTAACCAGTGCTCCGG+AGG + chr6.2:77916043-77916062 MS.gene05242:intron 55.0%
! TTCAGTGGCGGAATCTCCAC+CGG - chr6.2:77914971-77914990 None:intergenic 55.0%
!! TACCTCCGGAGCACTGGTTA+AGG - chr6.2:77916048-77916067 None:intergenic 55.0%
ACCAAGGACCGCATGGAGCT+AGG - chr6.2:77916137-77916156 None:intergenic 60.0%
ACTCCCTACCAAGGACCGCA+TGG - chr6.2:77916144-77916163 None:intergenic 60.0%
AGCTCCATGCGGTCCTTGGT+AGG + chr6.2:77916137-77916156 MS.gene05242:CDS 60.0%
CACCTGGTCGATGTTCACCC+TGG + chr6.2:77914929-77914948 MS.gene05242:CDS 60.0%
CCAAGGACCGCATGGAGCTA+GGG - chr6.2:77916136-77916155 None:intergenic 60.0%
GCTCCATGCGGTCCTTGGTA+GGG + chr6.2:77916138-77916157 MS.gene05242:CDS 60.0%
GGCGTCTAGGCCTTTCTGGA+GGG + chr6.2:77917100-77917119 MS.gene05242:intron 60.0%
TGCCAGGGTGAACATCGACC+AGG - chr6.2:77914934-77914953 None:intergenic 60.0%
CCCTAGCTCCATGCGGTCCT+TGG + chr6.2:77916133-77916152 MS.gene05242:CDS 65.0%
GACTGTTGAGGCGGCGCCTT+TGG + chr6.2:77917043-77917062 MS.gene05242:intron 65.0%
GGCCTAGGCGCTCTCCAGAA+GGG - chr6.2:77917134-77917153 None:intergenic 65.0%
GGGCGTCTAGGCCTTTCTGG+AGG + chr6.2:77917099-77917118 MS.gene05242:intron 65.0%
GTTGAGGCGGCGCCTTTGGA+GGG + chr6.2:77917047-77917066 MS.gene05242:intron 65.0%
TGTTGAGGCGGCGCCTTTGG+AGG + chr6.2:77917046-77917065 MS.gene05242:intron 65.0%
! TTGAGGCGGCGCCTTTGGAG+GGG + chr6.2:77917048-77917067 MS.gene05242:intron 65.0%
!! GGAGGGCGTCTAGGCCTTTC+TGG + chr6.2:77917096-77917115 MS.gene05242:intron 65.0%
!! TGGAGAGCGCCTAGGCCCTT+AGG + chr6.2:77917137-77917156 MS.gene05242:intron 65.0%
AGGCCTAGACGCCCTCCCGA+AGG - chr6.2:77917093-77917112 None:intergenic 70.0%
GGCCTAGGCGCCCTCCAGAA+AGG - chr6.2:77917113-77917132 None:intergenic 70.0%
GGCGCTCTCCAGAAGGGCCT+AGG - chr6.2:77917128-77917147 None:intergenic 70.0%
GGGCCTAGGCGCTCTCCAGA+AGG - chr6.2:77917135-77917154 None:intergenic 70.0%
!! GGCCCTTCTGGAGAGCGCCT+AGG + chr6.2:77917129-77917148 MS.gene05242:intron 70.0%
!! GGCCTTTCTGGAGGGCGCCT+AGG + chr6.2:77917108-77917127 MS.gene05242:intron 70.0%
CCTGGGCCTCAGGGGCCTTC+GGG + chr6.2:77917075-77917094 MS.gene05242:intron 75.0%
GCCTGGGCCTCAGGGGCCTT+CGG + chr6.2:77917074-77917093 MS.gene05242:intron 75.0%
GGCCTCAGGGGCCTTCGGGA+GGG + chr6.2:77917079-77917098 MS.gene05242:intron 75.0%
! GCCTTTGGAGGGGCGCGCCT+GGG + chr6.2:77917058-77917077 MS.gene05242:intron 75.0%
!! GGAGGGCGCCTAGGCCCTTC+TGG + chr6.2:77917117-77917136 MS.gene05242:intron 75.0%
!! GGGCCTTCGGGAGGGCGTCT+AGG + chr6.2:77917087-77917106 MS.gene05242:intron 75.0%
! CCCGAAGGCCCCTGAGGCCC+AGG - chr6.2:77917078-77917097 None:intergenic 80.0%
! CGCCCTCCCGAAGGCCCCTG+AGG - chr6.2:77917084-77917103 None:intergenic 80.0%
! GCCCAGGCGCGCCCCTCCAA+AGG - chr6.2:77917062-77917081 None:intergenic 80.0%
! GGGCCTCAGGGGCCTTCGGG+AGG + chr6.2:77917078-77917097 MS.gene05242:intron 80.0%
!! AGGGGCGCGCCTGGGCCTCA+GGG + chr6.2:77917066-77917085 MS.gene05242:intron 80.0%
!! CGCCTTTGGAGGGGCGCGCC+TGG + chr6.2:77917057-77917076 MS.gene05242:intron 80.0%
! GGGGCGCGCCTGGGCCTCAG+GGG + chr6.2:77917067-77917086 MS.gene05242:intron 85.0%
!! GAGGGGCGCGCCTGGGCCTC+AGG + chr6.2:77917065-77917084 MS.gene05242:intron 85.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 77913491 77918532 77913491 ID=MS.gene05242
chr6.2 mRNA 77913491 77918532 77913491 ID=MS.gene05242.t1;Parent=MS.gene05242
chr6.2 exon 77913491 77913629 77913491 ID=MS.gene05242.t1.exon1;Parent=MS.gene05242.t1
chr6.2 CDS 77913491 77913629 77913491 ID=cds.MS.gene05242.t1;Parent=MS.gene05242.t1
chr6.2 exon 77914482 77914559 77914482 ID=MS.gene05242.t1.exon2;Parent=MS.gene05242.t1
chr6.2 CDS 77914482 77914559 77914482 ID=cds.MS.gene05242.t1;Parent=MS.gene05242.t1
chr6.2 exon 77914631 77914718 77914631 ID=MS.gene05242.t1.exon3;Parent=MS.gene05242.t1
chr6.2 CDS 77914631 77914718 77914631 ID=cds.MS.gene05242.t1;Parent=MS.gene05242.t1
chr6.2 exon 77914807 77915062 77914807 ID=MS.gene05242.t1.exon4;Parent=MS.gene05242.t1
chr6.2 CDS 77914807 77915062 77914807 ID=cds.MS.gene05242.t1;Parent=MS.gene05242.t1
chr6.2 exon 77915778 77915893 77915778 ID=MS.gene05242.t1.exon5;Parent=MS.gene05242.t1
chr6.2 CDS 77915778 77915893 77915778 ID=cds.MS.gene05242.t1;Parent=MS.gene05242.t1
chr6.2 exon 77916103 77916320 77916103 ID=MS.gene05242.t1.exon6;Parent=MS.gene05242.t1
chr6.2 CDS 77916103 77916320 77916103 ID=cds.MS.gene05242.t1;Parent=MS.gene05242.t1
chr6.2 exon 77917437 77917468 77917437 ID=MS.gene05242.t1.exon7;Parent=MS.gene05242.t1
chr6.2 CDS 77917437 77917468 77917437 ID=cds.MS.gene05242.t1;Parent=MS.gene05242.t1
chr6.2 exon 77917612 77917714 77917612 ID=MS.gene05242.t1.exon8;Parent=MS.gene05242.t1
chr6.2 CDS 77917612 77917714 77917612 ID=cds.MS.gene05242.t1;Parent=MS.gene05242.t1
chr6.2 exon 77917958 77918066 77917958 ID=MS.gene05242.t1.exon9;Parent=MS.gene05242.t1
chr6.2 CDS 77917958 77918066 77917958 ID=cds.MS.gene05242.t1;Parent=MS.gene05242.t1
chr6.2 exon 77918194 77918271 77918194 ID=MS.gene05242.t1.exon10;Parent=MS.gene05242.t1
chr6.2 CDS 77918194 77918271 77918194 ID=cds.MS.gene05242.t1;Parent=MS.gene05242.t1
chr6.2 exon 77918499 77918532 77918499 ID=MS.gene05242.t1.exon11;Parent=MS.gene05242.t1
chr6.2 CDS 77918499 77918532 77918499 ID=cds.MS.gene05242.t1;Parent=MS.gene05242.t1
Gene Sequence

>MS.gene05242

ATGATTCCTTTGGTAGAAGATGAAAGGGAATCGAACATTATTGGGCTGAATGGAAGAAGCAAACATGGGGTAGAAGATGATGATAATGGAAATGGGTCACAAAAAATTGAAGCGCCCTACCTCAAGGAAGAACCTGACAGTGGGGAAAGATTTGACCTTGTTTGCATATTCAAATCAACTGAGAAACTTGATAAAAAAAATTGATTGAGAATTGTTTAAGGTTTGAAGGTATGGAGAGAAGGGGGTGAAGAAGACGATAGAAGCTAACACAGTTCTACTTGCTGTGTGTTTTTAATTTTTTCTGTTTTTTCTTTTCACGATCCTCAAACAGCTAGTTGTAAACTGGAGTAAATAGCAGTAGTAATAGTGGACGTGCAAAAAGTAATTCTCTTATGATTATTATTTGGAAATGGCTGTAAAAGCCCACATTGTGTTAAGTCCAACAAATGTGTTAAGCCCATATTTTGTTATCTCTCATTTCATACATGTTTTATTTTTGTTTTGTGTTAGTGTTATTTTGAATTTTTAATAAAATTATATGGATCTCTTATGAATTTTGACTAGAATATTTTTGTTAGTATTTACCGCTCCCCCTAATATTTTGGTCAAGATCCGCCACTGATTTTCAGACATATATAGCTAGCATTTATTGATTTCATGGTTAAATTTTTTTTTATTACAATTGCATGGTTAATTAATTTTTTTTATTACAATTGCATGGTTAATTAATAAATTGGAGCATGTTTAATTCGCGAGACAACCGTGATAAAGGTTTTCGCGTTATTTAGCATTGCTCTGTTTTTTTTTTTTTTTATGTATCACTATTAATATTAACTTAAGGTGTGTTTAATGTTTACCCTTAAAAAAAGTTATATATAAAGATGTATCCTTACTATTTTTAAAAAAAGTTCATCTTTAAATCAAGTCCATATTAGACACCCTATAAATTTATAATATTAATTTACATGTTAAATTCCTTTATTAATTGCAGAAGGAAAGATTGGTGGAGGTGTAAATAAGGAAGGAATCAACTATTACAATAACCTCATCAATGAGCTTCTGGCCAAGGGTAATACCATATGAACTTCTTCTTCATTTAATGATTTTGTCTAAAATACATCAATTGCTATGTCAATGTAGGTCTTCAACCCTTTGTGACCCTTTTTCATTGGGACCTTCCTCAAACTCTTGAAGAAGAATATGGTGGATTTTTAAGTCCTAATATAGTGTAATTGACATCCCATATGACCAAAGATAATCAAATATCATGAAGTTAGGTATATAGTGTTTTTTCCTCTAACTATGATTATATCCAGGAACGACTTTCAAGACTATTCAGAACTTTGTTTTAAAGAATTTGGAGATAGAGTAAAGCATTGGATCACATTGAATGAACCATGGAGCTTTGCCAAGCATGCTTATGCTGATGGAAAGTTAGCACCTGGTCGATGTTCACCCTGGCAAAACTTGAATTGCACCGGTGGAGATTCCGCCACTGAACCCTATATCGCGGCTCATAATCAAATACTTGCTCATGCATCTGCTGTCAATGTCTACAAAACTAAGTATCAGGTTTGAATTTATTTTAATTAAATCAATTCTCGTACGTAGTGTATGTCTTAGATTTTGATGTCTACTCAACCTTGCAAAAACAAATGGCAAGGTAGGGTTTGTACTTTTCTCTAATACGTCCCCTTTATGCTTTGGCTAGCTATTGAGTTATGCGCTATATATGATAGTATATGATAGGTTTTCAAGTTTAGATTGACACGAAATCAATCAACATTACTAGTTTATATAGTAAGAGCATGTCGAGTGTCATAGATATTTCTATAAGTTGATGAACTGTATCTTAATTTTCCAATCCATTGAAGGAGTTTAATGTGCCAAAGTGGTTAGCATAAAAATTGCTGAAGTATTTTAAATAAGATATTATATCATAGAAATTAATCAACTAATGTTTAACTTTATGACAATATTGAGTAGAAATAAAAAAATATAAAAATGTGACTTGCTTAAGAGTTGCATAATTATTTACAATTGAAGCTAAATATGTATGAGTTGCATCAGGATGACGTGGCATTGTGGGACTATCTCTTAGTAGTTTATGAAACCCAAAATAAACTCCTTAAAAAATAACCTTTGAAGACGCTCTAAGGGTTGCCAGCCACTTAATTAAGGCTATTCTTTATACTTAAGTTTTTTTATTCCAATACTATGTATTTCTTCATCAATTAATATCCATATTCACTATTGATACCTTATTTTCTTTACTTTGTATACACAGACATCTCAACAGGGCAAGATAGGGATAACATTAATGTGTCAGTGGATGGTGCCACTCTATGATACAAAATTGGATCATCATGCTTCACAAAGAGCCATTGATTTCATGTTTGGATGGTAATTAACTACTTTATGAACCATAAATTATATGTGAAACTCAACTATATATAGTAGTAATTATACAAGACATTAAACTCTTTTAAAGGAGAAGCCTAAACATTAAATAATGTAACTTCATTGTTAACATTTTCAATTACTATATTTGTTTCCTTAACCAGTGCTCCGGAGGTATCGATTAACATTTCTTTTTAAAAAATGTATTGTAGGTTTATGGATCCATTGACAATAGGAGACTACCCTAGCTCCATGCGGTCCTTGGTAGGGAGTCGATTACCAAAGTTTTCTACATATCAAGTAAAGCTTGTAAGAGGGTCCTTTGATTTTATTGGATTAAACTATTACACTTCCAATTATGCAACTAATGCACCCGAGTTAAGTGAAGCCAAACCCAGCTACATCACAGATTCACTTGTTATTCTTACAAGTAAGTGTGTTAGTGATGATATTTTCCATTAATATTAATAATACAGTAGAATACACCTTAGTTTAACACACAGCAAGATTCATTACTATCACATCTTAAATGTGTGACACTCTAATGCATCAATTAATTCAATTTAAAGCAAAAAATAATCATACCTCTGCAAGTGTGAGTAATAAGTCTCACATTGGATAGAAAAGTGGAGGTTGAACACTTTATAAGTGAGAGAGGACCCATAAAATAAGTGGTTAATGTTTTACGTTTTGATGGTTAGTAGGGTATATGTTTTATGTTTTCATGGTTAGTGGGGTATTCTAAATTGTTAATTAAATACATGTGAAATAAGTTGTTAATATCATCCATTTTTGTGGTTTCGTTAATTAAATACATGTGAAATAAGTTGTTAATATCATCCATTTTTGTGGTTAATGGTGTAGTGAAAGTTTTTAATGCCATTATTTTTGTACTTGTAAAAGTACAATAAAAGAATCTAGGGTTTAGACTATTTATAAGATGCCTTGAGAATTTTTTTGAATCGGCAAAATTTTATTAAAACCGAAACTCATGCAAGACGCAACGAGCCGGTGAAACAACAATACAAAGATGCCTTGAGAATGATCCCAACAGTGGTATTTATAACCCTCTGTGGACTTGTTTTTGCTTGACTTAAGCCCTAAGCAAGCTGTGCTTTAAGTCTTTTCATTGACTTCTAGAAGCTTTTAGGAGACTGTTGAGGCGGCGCCTTTGGAGGGGCGCGCCTGGGCCTCAGGGGCCTTCGGGAGGGCGTCTAGGCCTTTCTGGAGGGCGCCTAGGCCCTTCTGGAGAGCGCCTAGGCCCTTAGGAGTAGATTGACGGTTCAATTTTGTATTTGTGTTATGAAAGTTCTCCAATATTAAAAAAAAAAAGACAAATAAAAGTATTGTTCATATGTATATGTGTAAAAAGTTGTGTTAGAATAAATGCTGTTGTTAATAATTATTAACTAGCTAGTAGGAGGAAAATTTGGGTGAACATATGAGTATGGGAATAAATTTGAGTGACATGTAACAACTAAATTTAGTGTAAGCAACTACATATATTTATGTTAACAATTGACTATTATGTAATTTTTTTTTACAGACAAGCGCAATGGAATACCTATTGGCCCAACAGTATGTGCGTGATAATTAAGTTGTAAACCTAATGTTTTTACATTTTAATTACAAACAATATATAATGCTTATTTCAATTAGGTTTTCATTTTATATTTTTTTGGACTTCGTTGACATAAAAGGAACCTATATTACACATGCAGGCAGCTTCAAAATGGTTATCAATTTATCCAAAGGGAATTCATGACCTATTGCTCTACATTAAAATAAAGTACAACAACCCGTTGATCTATATCACTGAAAATGGTAATTCTAATACACCAACTAGATTTTCTTTCAATCTATTTCTTTAAGGTGCCAAAGTTAAGCATTGGTTTATACTCAAATTTAGATAGGAAATTTACGTTAGTCGCAGTTATTTCATTCTAATATACTCCCTATGTTCCTGTATGTAAGCACCATTTGCATCTAATAAAAGAGTGTTTAGATATAGAGACGGCGGGAGTACAATTTTATTGTAAACACATTATATTGTGAATTTATATATAGGCATGGATGATTTTAATGATCCAACACTCCCTCTTGAGAAAGCCCTTGAAGACACACAAAGGATTGATTACTATCATGGTCATCTCTACTATCTTCAAACTGCAATAAAGTATGTGCCCTCAAACTAAAAACTTTGCACCGAAAAAATTAAATTAACGATATCTTTGTAATTTATGGTTGTTAAATAAGTTGTCAATCAAATAGTTGTTCAAATAATTTTATCCAAATTTTACAAGGGATGGTGCGAATGTGAACGGGTACTTTGCATGGTCATTGATTGACAACTTTGAATGGGCTTCAGGCTACACTTCAAGGTTTGGAATATACTTTGTAGATTATAATAATGGCCTCAAAAGATATCCAAAAATGTCGGCCATTTGGTTTAAGGATTTCCTACAACATAAAACAGTTACAAATAGTGATTCACGCTGAGAAGATGGAGTTAATTTATCACTTGTAAGTTGTTGTTACTTATGAACTTGAATAAAATTGATGCAATGAGAAACAATGTTGAATAGTCACATCTCAATATGCTAAATAGTGCCCTTAGAACGGTACTCTTAGGGAAATGGTGA
Protein sequence

>MS.gene05242.t1

MIPLVEDERESNIIGLNGRSKHGVEDDDNGNGSQKIEAPYLKEEPDKGKIGGGVNKEGINYYNNLINELLAKGLQPFVTLFHWDLPQTLEEEYGGFLSPNIVNDFQDYSELCFKEFGDRVKHWITLNEPWSFAKHAYADGKLAPGRCSPWQNLNCTGGDSATEPYIAAHNQILAHASAVNVYKTKYQTSQQGKIGITLMCQWMVPLYDTKLDHHASQRAIDFMFGWFMDPLTIGDYPSSMRSLVGSRLPKFSTYQVKLVRGSFDFIGLNYYTSNYATNAPELSEAKPSYITDSLVILTNKRNGIPIGPTAASKWLSIYPKGIHDLLLYIKIKYNNPLIYITENGMDDFNDPTLPLEKALEDTQRIDYYHGHLYYLQTAIKDGANVNGYFAWSLIDNFEWASGYTSSALRTVLLGKW