Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene052572.t1 | XP_024638350.1 | 98.3 | 630 | 11 | 0 | 1 | 630 | 1 | 630 | 0.00E+00 | 1249.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene052572.t1 | Q55G83 | 34.6 | 492 | 249 | 9 | 183 | 614 | 153 | 631 | 9.0e-76 | 286.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene052572.t1 | Q2HTV1 | 98.3 | 630 | 11 | 0 | 1 | 630 | 1 | 630 | 0.0e+00 | 1249.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene53578 | MS.gene052572 | PPI |
MS.gene64242 | MS.gene052572 | PPI |
MS.gene064936 | MS.gene052572 | PPI |
MS.gene073953 | MS.gene052572 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene052572.t1 | MTR_4g091510 | 98.254 | 630 | 11 | 0 | 1 | 630 | 1 | 630 | 0.0 | 1291 |
MS.gene052572.t1 | MTR_4g091510 | 98.240 | 625 | 11 | 0 | 6 | 630 | 1 | 625 | 0.0 | 1280 |
MS.gene052572.t1 | MTR_2g011640 | 75.994 | 629 | 146 | 2 | 4 | 630 | 50 | 675 | 0.0 | 987 |
MS.gene052572.t1 | MTR_8g464860 | 59.160 | 595 | 224 | 6 | 47 | 630 | 36 | 622 | 0.0 | 706 |
MS.gene052572.t1 | MTR_3g082750 | 29.607 | 331 | 201 | 8 | 217 | 542 | 203 | 506 | 2.33e-34 | 139 |
MS.gene052572.t1 | MTR_3g094740 | 29.316 | 307 | 188 | 8 | 214 | 514 | 200 | 483 | 1.11e-28 | 122 |
MS.gene052572.t1 | MTR_3g094740 | 29.316 | 307 | 188 | 8 | 214 | 514 | 200 | 483 | 1.26e-28 | 122 |
MS.gene052572.t1 | MTR_8g091710 | 28.713 | 303 | 187 | 8 | 214 | 510 | 191 | 470 | 9.94e-27 | 116 |
MS.gene052572.t1 | MTR_3g105760 | 25.185 | 405 | 260 | 9 | 216 | 606 | 123 | 498 | 3.93e-25 | 110 |
MS.gene052572.t1 | MTR_6g038750 | 26.718 | 393 | 256 | 7 | 212 | 604 | 126 | 486 | 1.08e-23 | 106 |
MS.gene052572.t1 | MTR_5g068050 | 26.536 | 358 | 225 | 9 | 216 | 559 | 126 | 459 | 1.46e-23 | 105 |
MS.gene052572.t1 | MTR_3g070410 | 27.619 | 315 | 201 | 11 | 227 | 530 | 96 | 394 | 2.57e-22 | 102 |
MS.gene052572.t1 | MTR_4g026450 | 24.439 | 401 | 262 | 9 | 213 | 604 | 150 | 518 | 6.17e-22 | 100 |
MS.gene052572.t1 | MTR_1g009860 | 27.622 | 286 | 180 | 6 | 219 | 500 | 132 | 394 | 3.84e-21 | 98.2 |
MS.gene052572.t1 | MTR_1g046620 | 26.804 | 291 | 178 | 7 | 229 | 514 | 195 | 455 | 4.39e-21 | 98.6 |
MS.gene052572.t1 | MTR_1g009860 | 27.899 | 276 | 172 | 6 | 229 | 500 | 142 | 394 | 5.07e-21 | 97.8 |
MS.gene052572.t1 | MTR_1g008980 | 27.536 | 345 | 185 | 14 | 205 | 514 | 21 | 335 | 1.44e-20 | 97.1 |
MS.gene052572.t1 | MTR_4g104070 | 29.260 | 311 | 172 | 11 | 229 | 520 | 79 | 360 | 4.16e-20 | 94.4 |
MS.gene052572.t1 | MTR_5g077080 | 26.460 | 291 | 182 | 9 | 232 | 516 | 98 | 362 | 4.19e-19 | 91.7 |
MS.gene052572.t1 | MTR_0053s0030 | 27.835 | 291 | 180 | 7 | 229 | 514 | 151 | 416 | 1.23e-17 | 87.4 |
MS.gene052572.t1 | MTR_1g095480 | 27.491 | 291 | 172 | 6 | 220 | 495 | 202 | 468 | 1.95e-16 | 83.6 |
MS.gene052572.t1 | MTR_1g095480 | 28.846 | 260 | 158 | 5 | 220 | 464 | 202 | 449 | 3.67e-16 | 82.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene052572.t1 | AT1G11390 | 62.717 | 633 | 224 | 5 | 1 | 630 | 1 | 624 | 0.0 | 816 |
MS.gene052572.t1 | AT1G61640 | 62.770 | 556 | 203 | 4 | 77 | 630 | 68 | 621 | 0.0 | 731 |
MS.gene052572.t1 | AT1G61640 | 61.896 | 517 | 193 | 4 | 77 | 591 | 68 | 582 | 0.0 | 666 |
MS.gene052572.t1 | AT1G61640 | 55.676 | 370 | 161 | 3 | 77 | 444 | 68 | 436 | 3.79e-144 | 427 |
MS.gene052572.t1 | AT3G07700 | 28.657 | 335 | 205 | 8 | 217 | 548 | 192 | 495 | 3.41e-32 | 132 |
MS.gene052572.t1 | AT3G07700 | 28.657 | 335 | 205 | 8 | 217 | 548 | 192 | 495 | 3.41e-32 | 132 |
MS.gene052572.t1 | AT3G07700 | 28.657 | 335 | 205 | 8 | 217 | 548 | 192 | 495 | 3.41e-32 | 132 |
MS.gene052572.t1 | AT3G07700 | 29.375 | 320 | 196 | 7 | 217 | 533 | 192 | 484 | 3.86e-32 | 132 |
MS.gene052572.t1 | AT5G24970 | 26.136 | 440 | 276 | 11 | 189 | 606 | 148 | 560 | 1.40e-28 | 122 |
MS.gene052572.t1 | AT5G24970 | 26.136 | 440 | 276 | 11 | 189 | 606 | 109 | 521 | 2.15e-28 | 121 |
MS.gene052572.t1 | AT5G64940 | 28.990 | 307 | 189 | 8 | 214 | 514 | 215 | 498 | 8.82e-28 | 119 |
MS.gene052572.t1 | AT5G64940 | 28.990 | 307 | 189 | 8 | 214 | 514 | 215 | 498 | 8.82e-28 | 119 |
MS.gene052572.t1 | AT1G79600 | 30.537 | 298 | 179 | 9 | 221 | 514 | 150 | 423 | 1.65e-26 | 115 |
MS.gene052572.t1 | AT1G65950 | 30.405 | 296 | 184 | 8 | 180 | 466 | 53 | 335 | 3.61e-26 | 112 |
MS.gene052572.t1 | AT1G65950 | 30.405 | 296 | 184 | 8 | 180 | 466 | 53 | 335 | 9.10e-26 | 112 |
MS.gene052572.t1 | AT5G24970 | 25.455 | 440 | 276 | 12 | 189 | 606 | 109 | 518 | 2.99e-25 | 111 |
MS.gene052572.t1 | AT4G24810 | 29.299 | 314 | 170 | 8 | 229 | 521 | 33 | 315 | 7.91e-24 | 103 |
MS.gene052572.t1 | AT5G50330 | 31.561 | 301 | 160 | 9 | 229 | 511 | 76 | 348 | 8.18e-24 | 105 |
MS.gene052572.t1 | AT4G24810 | 29.393 | 313 | 169 | 8 | 229 | 520 | 33 | 314 | 1.75e-23 | 104 |
MS.gene052572.t1 | AT4G24810 | 29.393 | 313 | 169 | 8 | 229 | 520 | 33 | 314 | 1.75e-23 | 104 |
MS.gene052572.t1 | AT4G24810 | 29.393 | 313 | 169 | 8 | 229 | 520 | 76 | 357 | 2.22e-23 | 104 |
MS.gene052572.t1 | AT4G24810 | 31.660 | 259 | 137 | 7 | 229 | 466 | 33 | 272 | 4.41e-23 | 100 |
MS.gene052572.t1 | AT4G24810 | 28.972 | 321 | 167 | 10 | 229 | 520 | 33 | 321 | 3.05e-22 | 100 |
MS.gene052572.t1 | AT1G71810 | 25.521 | 384 | 257 | 6 | 221 | 604 | 123 | 477 | 9.32e-22 | 100 |
MS.gene052572.t1 | AT3G24190 | 26.490 | 302 | 192 | 8 | 214 | 514 | 191 | 463 | 1.65e-20 | 96.7 |
MS.gene052572.t1 | AT5G05200 | 25.816 | 337 | 212 | 10 | 221 | 546 | 129 | 438 | 3.27e-20 | 95.1 |
MS.gene052572.t1 | AT4G31390 | 27.055 | 292 | 184 | 7 | 219 | 505 | 168 | 435 | 6.43e-20 | 94.7 |
MS.gene052572.t1 | AT2G39190 | 27.055 | 292 | 175 | 7 | 220 | 495 | 201 | 470 | 1.71e-18 | 90.5 |
MS.gene052572.t1 | AT5G24810 | 27.019 | 359 | 187 | 14 | 195 | 514 | 60 | 382 | 1.85e-18 | 90.5 |
MS.gene052572.t1 | AT2G40090 | 25.325 | 308 | 207 | 9 | 227 | 525 | 98 | 391 | 1.81e-17 | 86.3 |
MS.gene052572.t1 | AT5G50330 | 28.571 | 301 | 153 | 9 | 229 | 511 | 76 | 332 | 5.54e-17 | 84.3 |
MS.gene052572.t1 | AT2G39190 | 28.743 | 167 | 108 | 3 | 220 | 385 | 201 | 357 | 9.33e-13 | 70.9 |
Find 149 sgRNAs with CRISPR-Local
Find 343 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCACCATTTGCAGATTATTT+TGG | 0.167715 | 4.3:-22613977 | MS.gene052572:CDS |
AGTTCATCCCTGCACTTAAT+TGG | 0.229978 | 4.3:-22613541 | MS.gene052572:CDS |
TGGAAAAGGCATTTACCTTT+TGG | 0.276940 | 4.3:-22611181 | MS.gene052572:CDS |
GTAGAAGGCCTGGTCTTGTT+AGG | 0.291072 | 4.3:-22614046 | MS.gene052572:CDS |
CAGGTCCGGCATTCATAAAA+TGG | 0.303106 | 4.3:-22613901 | MS.gene052572:CDS |
ACTTGTGCATCCCGCAGTTT+TGG | 0.315016 | 4.3:-22613375 | MS.gene052572:CDS |
AAAACTATGCTCAGGGGCTT+TGG | 0.338841 | 4.3:+22613808 | None:intergenic |
TCAAGCAGTGAGCCTGGCTT+TGG | 0.346858 | 4.3:-22614233 | MS.gene052572:CDS |
TGCCATCAATATTAACTCTA+TGG | 0.356498 | 4.3:+22611090 | None:intergenic |
TTATTTACAATTTCCGTCAA+TGG | 0.356698 | 4.3:-22613430 | MS.gene052572:CDS |
TCAATATAAGCCTTCGGATC+AGG | 0.360819 | 4.3:+22611947 | None:intergenic |
TTGGTGGAAACATATGAAAA+TGG | 0.369350 | 4.3:-22613356 | MS.gene052572:CDS |
TCCCTGCACTTAATTGGTTA+AGG | 0.369612 | 4.3:-22613535 | MS.gene052572:CDS |
TTTGCCTTTATTGTGGTAGA+AGG | 0.371174 | 4.3:-22614061 | MS.gene052572:CDS |
TATTCTTCCAATGGTTATAG+TGG | 0.376964 | 4.3:-22614280 | MS.gene052572:CDS |
CGCCATAGAGTTAATATTGA+TGG | 0.387144 | 4.3:-22611092 | MS.gene052572:CDS |
CATTATGTTGATGAGCTTCA+AGG | 0.387369 | 4.3:-22613320 | MS.gene052572:CDS |
ATGGGCTTTGCTTGCTGACC+AGG | 0.400663 | 4.3:+22613653 | None:intergenic |
AAAAGCGCTCTTGCTCATAT+TGG | 0.402007 | 4.3:-22613284 | MS.gene052572:CDS |
AAAACTATAGAAAGCGCATT+TGG | 0.402533 | 4.3:-22613773 | MS.gene052572:CDS |
TGTCCTGCATCGGTTGATAT+TGG | 0.406194 | 4.3:+22614468 | None:intergenic |
ACAAGTGGATAAACAGGCTT+AGG | 0.406606 | 4.3:+22613392 | None:intergenic |
AGCAATTACTTGAGAAAGTT+AGG | 0.407683 | 4.3:-22611115 | MS.gene052572:CDS |
AATTGCTCCATGCACTCGGC+TGG | 0.409786 | 4.3:+22611131 | None:intergenic |
AGGTCCGGCATTCATAAAAT+GGG | 0.412415 | 4.3:-22613900 | MS.gene052572:CDS |
AACAAGAACGAGCCAAAGCC+AGG | 0.418604 | 4.3:+22614221 | None:intergenic |
GAAGAATTGCCTGTTGCATC+TGG | 0.432722 | 4.3:-22613719 | MS.gene052572:CDS |
GGATGCACAAGTGGATAAAC+AGG | 0.432971 | 4.3:+22613386 | None:intergenic |
CAGGCCTTCTACCACAATAA+AGG | 0.433283 | 4.3:+22614057 | None:intergenic |
CTTTATTGTGGTAGAAGGCC+TGG | 0.436081 | 4.3:-22614056 | MS.gene052572:CDS |
CACATAAATCTCAAATTGCT+TGG | 0.437682 | 4.3:-22614321 | MS.gene052572:CDS |
ATGGATTCTAAGAATAGATT+CGG | 0.438036 | 4.3:+22614543 | None:intergenic |
TGCACTTAATTGGTTAAGGT+TGG | 0.453314 | 4.3:-22613531 | MS.gene052572:CDS |
TGGCAGCGCAAGCTTGATCC+CGG | 0.453902 | 4.3:-22610825 | MS.gene052572:CDS |
GATTGAACTACATCCTTCAC+TGG | 0.455273 | 4.3:+22614426 | None:intergenic |
TGTTAGTTGCAGTGAAGGTC+AGG | 0.455861 | 4.3:-22613631 | MS.gene052572:CDS |
GTCCTGCATCGGTTGATATT+GGG | 0.456084 | 4.3:+22614469 | None:intergenic |
ATTCATGCAGACATGCATCC+TGG | 0.462391 | 4.3:-22612178 | MS.gene052572:CDS |
GCACTCATACACAAAGCATT+TGG | 0.464871 | 4.3:+22614112 | None:intergenic |
TTTCTAACAGGAAGTGGAAA+AGG | 0.472158 | 4.3:-22611195 | MS.gene052572:intron |
TACACTAGAAAGAGCAGGTC+CGG | 0.473539 | 4.3:-22613915 | MS.gene052572:CDS |
CAGCAAAATCAGTCAGATGC+AGG | 0.476405 | 4.3:-22614148 | MS.gene052572:CDS |
AGTTCAGGAAAATGTGGCTC+CGG | 0.476480 | 4.3:-22613949 | MS.gene052572:CDS |
GTGTAGCTAAAACTATGCTC+AGG | 0.476963 | 4.3:+22613800 | None:intergenic |
TAGCGATCGGGTAAATTTAG+TGG | 0.477735 | 4.3:-22612050 | MS.gene052572:CDS |
GACCTTCACTGCAACTAACA+TGG | 0.486515 | 4.3:+22613634 | None:intergenic |
GATTGCTCAAGCAGTGAGCC+TGG | 0.489155 | 4.3:-22614239 | MS.gene052572:CDS |
GGCATGACGGCTGAACTCTC+TGG | 0.490763 | 4.3:-22612073 | MS.gene052572:CDS |
ACTCGAACAAGAATATTTCC+AGG | 0.491498 | 4.3:+22612160 | None:intergenic |
GCAGTGAAGGTCAGGCATCC+TGG | 0.494938 | 4.3:-22613623 | MS.gene052572:CDS |
AACCTTAACCAATTAAGTGC+AGG | 0.495535 | 4.3:+22613533 | None:intergenic |
CAATATAAGCCTTCGGATCA+GGG | 0.495816 | 4.3:+22611948 | None:intergenic |
TGTCTCAAGTTGACCTTGCA+AGG | 0.500238 | 4.3:-22613475 | MS.gene052572:CDS |
GCAATACTTCCAGATGCAAC+AGG | 0.505670 | 4.3:+22613710 | None:intergenic |
GGGGTCAGTGGGCGGCTACA+CGG | 0.505755 | 4.3:-22613880 | MS.gene052572:CDS |
ATTACCTCAATATAAGCCTT+CGG | 0.506641 | 4.3:+22611941 | None:intergenic |
TTATGCTTGGACACATTGGG+AGG | 0.510559 | 4.3:-22614570 | MS.gene052572:CDS |
TGTTCGAGTGCCTCAGAGCA+AGG | 0.513395 | 4.3:-22612146 | MS.gene052572:CDS |
TGAACTCTCTGGTAGCGATC+GGG | 0.513964 | 4.3:-22612062 | MS.gene052572:CDS |
CATTGCTGCTTAGAGCTGAC+TGG | 0.514309 | 4.3:-22610776 | MS.gene052572:CDS |
TTAAAGACGCACGATGCACT+TGG | 0.516442 | 4.3:+22613687 | None:intergenic |
AATGAGCAGCTTCCCTTGCA+AGG | 0.519250 | 4.3:+22613462 | None:intergenic |
CTGTGTGTCAGCAGAAATGC+AGG | 0.519862 | 4.3:-22614508 | MS.gene052572:CDS |
GGGCCAAAATAATCTGCAAA+TGG | 0.520579 | 4.3:+22613974 | None:intergenic |
TGTCAGCAGAAATGCAGGTT+TGG | 0.521589 | 4.3:-22614503 | MS.gene052572:CDS |
AAAGCTGTTGCCCGCAGAGA+TGG | 0.526628 | 4.3:-22612019 | MS.gene052572:CDS |
ATATCTTGAGGAAATAGATC+AGG | 0.530009 | 4.3:+22613857 | None:intergenic |
CACCCAATATCAACCGATGC+AGG | 0.531406 | 4.3:-22614471 | MS.gene052572:CDS |
GCCCATGTTAGTTGCAGTGA+AGG | 0.532016 | 4.3:-22613636 | MS.gene052572:CDS |
TAGAAGGCCTGGTCTTGTTA+GGG | 0.534001 | 4.3:-22614045 | MS.gene052572:CDS |
TATGTTTCCACCAAAACTGC+GGG | 0.536343 | 4.3:+22613365 | None:intergenic |
TACTGTCATGGTGACCACCT+TGG | 0.536843 | 4.3:-22611060 | MS.gene052572:CDS |
ACCTTCTCGAGTTCCCCAAA+AGG | 0.537128 | 4.3:+22611166 | None:intergenic |
TGAGGCTTTGATTTGAAGAA+CGG | 0.538324 | 4.3:+22612115 | None:intergenic |
ATTCATAAAATGGGGTCAGT+GGG | 0.541035 | 4.3:-22613891 | MS.gene052572:CDS |
CATAAAATATATTCTTCCAA+TGG | 0.541989 | 4.3:-22614289 | MS.gene052572:CDS |
GGTAGATCCACTATAACCAT+TGG | 0.542434 | 4.3:+22614273 | None:intergenic |
CTGAACTCTCTGGTAGCGAT+CGG | 0.542589 | 4.3:-22612063 | MS.gene052572:CDS |
ACCTTCACTGCAACTAACAT+GGG | 0.543161 | 4.3:+22613635 | None:intergenic |
AATGGTGCCATCAGTATGCT+TGG | 0.544641 | 4.3:+22613992 | None:intergenic |
AGCGGTCCGACCATCTCTGC+GGG | 0.550823 | 4.3:+22612009 | None:intergenic |
GAAGGTCAGGCATCCTGGTG+TGG | 0.551469 | 4.3:-22613618 | MS.gene052572:CDS |
AAGTAATTGCTCCATGCACT+CGG | 0.552365 | 4.3:+22611127 | None:intergenic |
AAGACACGTCCCTCCATTGA+CGG | 0.554021 | 4.3:+22613417 | None:intergenic |
GTTTGCATTTGCCTTTATTG+TGG | 0.554906 | 4.3:-22614068 | MS.gene052572:CDS |
GTTCAGGAAAATGTGGCTCC+GGG | 0.558474 | 4.3:-22613948 | MS.gene052572:CDS |
CAGTATAAGTTTCCCAGTGA+AGG | 0.559877 | 4.3:-22614439 | MS.gene052572:CDS |
GACGGAAATTGTAAATAAAG+CGG | 0.560686 | 4.3:+22613435 | None:intergenic |
GATGAGCTTCAAGGACATGA+AGG | 0.561596 | 4.3:-22613311 | MS.gene052572:CDS |
CTGATAGATTCTCCCACACC+AGG | 0.564921 | 4.3:+22613605 | None:intergenic |
AAGAATTACCTCTAAAACCA+AGG | 0.567303 | 4.3:+22611043 | None:intergenic |
ATTGCTCCATGCACTCGGCT+GGG | 0.575831 | 4.3:+22611132 | None:intergenic |
TTTACAATTTCCGTCAATGG+AGG | 0.577225 | 4.3:-22613427 | MS.gene052572:CDS |
TGTAGCTAAAACTATGCTCA+GGG | 0.577705 | 4.3:+22613801 | None:intergenic |
CATTCATAAAATGGGGTCAG+TGG | 0.577994 | 4.3:-22613892 | MS.gene052572:CDS |
TATGCTTGGACACATTGGGA+GGG | 0.577995 | 4.3:-22614569 | MS.gene052572:CDS |
TCTTTAAAATATCGTTACCC+TGG | 0.578971 | 4.3:-22613671 | MS.gene052572:CDS |
ACAGAACTGCCCTGATCCGA+AGG | 0.579301 | 4.3:-22611957 | MS.gene052572:CDS |
CAAGTGGATAAACAGGCTTA+GGG | 0.583288 | 4.3:+22613393 | None:intergenic |
GGCAGCGCAAGCTTGATCCC+GGG | 0.583620 | 4.3:-22610824 | MS.gene052572:CDS |
AAGGTCAGGCATCCTGGTGT+GGG | 0.584830 | 4.3:-22613617 | MS.gene052572:CDS |
TGTCTCCATCACATTATACC+CGG | 0.586292 | 4.3:+22610806 | None:intergenic |
TTACAATTTCCGTCAATGGA+GGG | 0.587427 | 4.3:-22613426 | MS.gene052572:CDS |
CATAAAATGGGGTCAGTGGG+CGG | 0.590431 | 4.3:-22613888 | MS.gene052572:CDS |
TGGCAATGTTTGTACTGTCA+TGG | 0.591925 | 4.3:-22611072 | MS.gene052572:CDS |
GTGTGGGAGAATCTATCAGA+AGG | 0.592449 | 4.3:-22613601 | MS.gene052572:CDS |
ACCTTAACCAATTAAGTGCA+GGG | 0.592733 | 4.3:+22613534 | None:intergenic |
GGTTCACCCAGCCGAGTGCA+TGG | 0.595900 | 4.3:-22611138 | MS.gene052572:CDS |
ATTGCTGCTTAGAGCTGACT+GGG | 0.597161 | 4.3:-22610775 | MS.gene052572:CDS |
ATTCTCTCCAAGCATACTGA+TGG | 0.598290 | 4.3:-22613999 | MS.gene052572:CDS |
TGATCCCGGGTATAATGTGA+TGG | 0.598520 | 4.3:-22610811 | MS.gene052572:CDS |
TAAAGACGCACGATGCACTT+GGG | 0.599670 | 4.3:+22613688 | None:intergenic |
AGCTTAGTACATATATCTTG+AGG | 0.603331 | 4.3:+22613845 | None:intergenic |
GCCCCGAGTTCAGGAAAATG+TGG | 0.603655 | 4.3:-22613955 | MS.gene052572:CDS |
TAGCTCTCCCTAACAAGACC+AGG | 0.606113 | 4.3:+22614038 | None:intergenic |
ACTGCATATATGTCCTGCAT+CGG | 0.608798 | 4.3:+22614458 | None:intergenic |
TGCATGTGGAGAGCTAGCAT+TGG | 0.609017 | 4.3:-22614173 | MS.gene052572:CDS |
CCGCTGCTGAGTGCACACTC+AGG | 0.611189 | 4.3:-22611991 | MS.gene052572:CDS |
TGATCCGAAGGCTTATATTG+AGG | 0.613318 | 4.3:-22611945 | MS.gene052572:intron |
CATCGTACACTAGAAAGAGC+AGG | 0.614986 | 4.3:-22613920 | MS.gene052572:CDS |
GCTAGAGAAAACTTTCACAA+AGG | 0.615426 | 4.3:-22614391 | MS.gene052572:CDS |
AAAACTGCGGGATGCACAAG+TGG | 0.616371 | 4.3:+22613377 | None:intergenic |
AGCAAAATCAGTCAGATGCA+GGG | 0.618278 | 4.3:-22614147 | MS.gene052572:CDS |
CAGAGTCTGATGGCCCCTTG+AGG | 0.619099 | 4.3:-22610729 | None:intergenic |
TTACACAATTCAGAGTCTGA+TGG | 0.621107 | 4.3:-22610739 | MS.gene052572:CDS |
TTTCCTCGATGTAGGCATGA+CGG | 0.621991 | 4.3:-22612086 | MS.gene052572:CDS |
ATGAGCTTCAAGGACATGAA+GGG | 0.622640 | 4.3:-22613310 | MS.gene052572:CDS |
GTCTCAAGTTGACCTTGCAA+GGG | 0.622912 | 4.3:-22613474 | MS.gene052572:CDS |
TGGGCTTTGCTTGCTGACCA+GGG | 0.624719 | 4.3:+22613654 | None:intergenic |
AAAGAAAGAACCTCCTCAAG+GGG | 0.634321 | 4.3:+22610716 | None:intergenic |
ATATGTTTCCACCAAAACTG+CGG | 0.642456 | 4.3:+22613364 | None:intergenic |
GTCTCCATCACATTATACCC+GGG | 0.643086 | 4.3:+22610807 | None:intergenic |
TTGTGTATGAGTGCACAAGA+TGG | 0.646764 | 4.3:-22614103 | MS.gene052572:CDS |
CTAGTGTACGATGAACAACC+CGG | 0.650208 | 4.3:+22613930 | None:intergenic |
CCTGAGTGTGCACTCAGCAG+CGG | 0.653822 | 4.3:+22611991 | None:intergenic |
GGTTTGCGAGCCTTGCTCTG+AGG | 0.654052 | 4.3:+22612136 | None:intergenic |
CTGTTGCCCGCAGAGATGGT+CGG | 0.657647 | 4.3:-22612015 | MS.gene052572:CDS |
AAGGATGTAGTTCAATCATG+TGG | 0.658916 | 4.3:-22614420 | MS.gene052572:CDS |
CAGCGGTCCGACCATCTCTG+CGG | 0.665411 | 4.3:+22612008 | None:intergenic |
TGTAGTTCAATCATGTGGCG+AGG | 0.668343 | 4.3:-22614415 | MS.gene052572:CDS |
ATTGAACTACATCCTTCACT+GGG | 0.674087 | 4.3:+22614427 | None:intergenic |
GGTCCGGCATTCATAAAATG+GGG | 0.675314 | 4.3:-22613899 | MS.gene052572:CDS |
TGTGGGAGAATCTATCAGAA+GGG | 0.684154 | 4.3:-22613600 | MS.gene052572:CDS |
TTGAGCAATCATATGTACAG+AGG | 0.703226 | 4.3:+22614252 | None:intergenic |
ACATCGAGGAAAATTACATG+AGG | 0.705947 | 4.3:+22612097 | None:intergenic |
GGGAACTCGAGAAGGTGACG+CGG | 0.730457 | 4.3:-22611159 | MS.gene052572:CDS |
AATTACCTCTAAAACCAAGG+TGG | 0.739212 | 4.3:+22611046 | None:intergenic |
CAGCCGTCATGCCTACATCG+AGG | 0.745012 | 4.3:+22612083 | None:intergenic |
GTAGCTAAAACTATGCTCAG+GGG | 0.756366 | 4.3:+22613802 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATGTTTATTAGTTATTAAT+TGG | - | chr4.3:22611199-22611218 | MS.gene052572:intron | 10.0% |
!! | AAAAAGAGATACATATTTAA+TGG | + | chr4.3:22613474-22613493 | None:intergenic | 15.0% |
!! | AAAAATTAAATTTCAGCATA+AGG | - | chr4.3:22613797-22613816 | MS.gene052572:CDS | 15.0% |
!! | CAATATATATATAACAAGAA+AGG | + | chr4.3:22613058-22613077 | None:intergenic | 15.0% |
!! | TAAAAGTTAACAGAAAAAAA+AGG | + | chr4.3:22611268-22611287 | None:intergenic | 15.0% |
!! | TAAAATCTAATTTATGCTTT+CGG | + | chr4.3:22615317-22615336 | None:intergenic | 15.0% |
!!! | AACATAATGAATATATTTTG+TGG | + | chr4.3:22611115-22611134 | None:intergenic | 15.0% |
!!! | TTATTATGTATATTAGCTTA+TGG | - | chr4.3:22614348-22614367 | MS.gene052572:CDS | 15.0% |
!!! | TTCTTGTTATATATATATTG+TGG | - | chr4.3:22613058-22613077 | MS.gene052572:intron | 15.0% |
!! | AACTGATAAAATTTGGATAT+TGG | - | chr4.3:22610844-22610863 | MS.gene052572:intron | 20.0% |
!! | CATAAAATATATTCTTCCAA+TGG | - | chr4.3:22611973-22611992 | MS.gene052572:CDS | 20.0% |
!! | TAATTTACATTGTTAGTCAA+AGG | - | chr4.3:22613493-22613512 | MS.gene052572:CDS | 20.0% |
!! | TGTTATATATATATTGTGGT+TGG | - | chr4.3:22613062-22613081 | MS.gene052572:intron | 20.0% |
!! | TTAAATTTAATCCTGATCAT+CGG | + | chr4.3:22614539-22614558 | None:intergenic | 20.0% |
!! | TTAATAATTACCAATGTAGA+TGG | + | chr4.3:22615367-22615386 | None:intergenic | 20.0% |
!! | TTAATTTACAAGAGATTTCA+CGG | - | chr4.3:22610883-22610902 | MS.gene052572:intron | 20.0% |
!! | TTACAAGATTGAATTTCATA+AGG | + | chr4.3:22613774-22613793 | None:intergenic | 20.0% |
!! | TTCCAAAAACTAAAGTTATT+AGG | + | chr4.3:22613694-22613713 | None:intergenic | 20.0% |
!!! | AAGTATTGTAATAAAAACTG+TGG | + | chr4.3:22613387-22613406 | None:intergenic | 20.0% |
!!! | AAGTATTGTATACAGATATA+TGG | - | chr4.3:22611001-22611020 | MS.gene052572:intron | 20.0% |
!!! | ACAAATATAAGATTTAGAGT+TGG | + | chr4.3:22614640-22614659 | None:intergenic | 20.0% |
!!! | GTTGTAATTAACGTAATTTT+TGG | - | chr4.3:22611657-22611676 | MS.gene052572:intron | 20.0% |
!!! | TGGTGAATATATAATTTGTA+GGG | - | chr4.3:22615413-22615432 | MS.gene052572:intron | 20.0% |
!!! | TTGGTGAATATATAATTTGT+AGG | - | chr4.3:22615412-22615431 | MS.gene052572:intron | 20.0% |
! | AACTGAACTTTAGTTAAACT+TGG | + | chr4.3:22611365-22611384 | None:intergenic | 25.0% |
! | AATTAAGGTAAGTAAGTCAT+TGG | - | chr4.3:22610804-22610823 | MS.gene052572:CDS | 25.0% |
! | ATACAATTAATATACGCAAC+TGG | - | chr4.3:22614858-22614877 | MS.gene052572:intron | 25.0% |
! | ATATTCTCTCTTGCAAATTA+AGG | - | chr4.3:22610789-22610808 | MS.gene052572:CDS | 25.0% |
! | GAGATGAAACTGATAAAATT+TGG | - | chr4.3:22610837-22610856 | MS.gene052572:intron | 25.0% |
! | GATGATCAGGATTAAATTTA+AGG | - | chr4.3:22614538-22614557 | MS.gene052572:CDS | 25.0% |
! | GTTGCGTATATTAATTGTAT+TGG | + | chr4.3:22614858-22614877 | None:intergenic | 25.0% |
! | TACAATTAATATACGCAACT+GGG | - | chr4.3:22614859-22614878 | MS.gene052572:intron | 25.0% |
! | TCCATATTAACTTCATTTCA+GGG | + | chr4.3:22613172-22613191 | None:intergenic | 25.0% |
! | TGTTGGCAAAAATATTAACA+GGG | + | chr4.3:22613573-22613592 | None:intergenic | 25.0% |
! | TTATAAAAAGCCAATGACAA+TGG | + | chr4.3:22614944-22614963 | None:intergenic | 25.0% |
! | TTATTTACAATTTCCGTCAA+TGG | - | chr4.3:22612832-22612851 | MS.gene052572:intron | 25.0% |
! | TTGTTGGCAAAAATATTAAC+AGG | + | chr4.3:22613574-22613593 | None:intergenic | 25.0% |
! | TTTGCGAATAGTTTATATCT+AGG | + | chr4.3:22613885-22613904 | None:intergenic | 25.0% |
! | TTTGTCAAACAAATGCATTA+CGG | - | chr4.3:22611329-22611348 | MS.gene052572:intron | 25.0% |
!! | ATAATTGCTCGTAAATTTTG+TGG | - | chr4.3:22611056-22611075 | MS.gene052572:CDS | 25.0% |
!! | ATGGATTCTAAGAATAGATT+CGG | + | chr4.3:22611722-22611741 | None:intergenic | 25.0% |
!! | ATTTGTTGATCAAACAAACT+TGG | + | chr4.3:22613283-22613302 | None:intergenic | 25.0% |
!! | CACAAACACAATAGAATTTT+TGG | - | chr4.3:22614805-22614824 | MS.gene052572:intron | 25.0% |
!! | GAATATATAATTTGTAGGGT+TGG | - | chr4.3:22615417-22615436 | MS.gene052572:intron | 25.0% |
!! | TAATTGCTCGTAAATTTTGT+GGG | - | chr4.3:22611057-22611076 | MS.gene052572:CDS | 25.0% |
!! | TATGTATATTAGCTTATGGT+TGG | - | chr4.3:22614352-22614371 | MS.gene052572:CDS | 25.0% |
!! | TTTCGCTATTATCAATTTTG+TGG | - | chr4.3:22612686-22612705 | MS.gene052572:intron | 25.0% |
!!! | CAATAAATTTGATTTTGCCT+TGG | - | chr4.3:22610934-22610953 | MS.gene052572:intron | 25.0% |
!!! | CACCTAATAACTTTAGTTTT+TGG | - | chr4.3:22613689-22613708 | MS.gene052572:CDS | 25.0% |
!!! | TGTGAGTCATTTTATACATT+TGG | - | chr4.3:22615032-22615051 | MS.gene052572:intron | 25.0% |
!!! | TTATACATTTGGTTTTCTCT+TGG | - | chr4.3:22615043-22615062 | MS.gene052572:intron | 25.0% |
AAACATAAACTCTGTTACAG+TGG | + | chr4.3:22615255-22615274 | None:intergenic | 30.0% | |
AAATTTGGATATTGGAAGCT+AGG | - | chr4.3:22610852-22610871 | MS.gene052572:intron | 30.0% | |
AAGTGAAGTTCCAAAAAGAA+CGG | + | chr4.3:22611897-22611916 | None:intergenic | 30.0% | |
AATGCATTTGTTTGACAAAC+AGG | + | chr4.3:22611328-22611347 | None:intergenic | 30.0% | |
AATTACCAATGTAGATGGTT+TGG | + | chr4.3:22615362-22615381 | None:intergenic | 30.0% | |
AATTCTATTGTGTTTGTGTG+TGG | + | chr4.3:22614803-22614822 | None:intergenic | 30.0% | |
AGATATGTAGCTATTGTTAG+TGG | - | chr4.3:22613198-22613217 | MS.gene052572:intron | 30.0% | |
AGCAATTACTTGAGAAAGTT+AGG | - | chr4.3:22615147-22615166 | MS.gene052572:intron | 30.0% | |
AGCTTAGTACATATATCTTG+AGG | + | chr4.3:22612420-22612439 | None:intergenic | 30.0% | |
AGGTACTATAATAGATGACA+AGG | + | chr4.3:22613656-22613675 | None:intergenic | 30.0% | |
ATATCTTGAGGAAATAGATC+AGG | + | chr4.3:22612408-22612427 | None:intergenic | 30.0% | |
ATTACCTCAATATAAGCCTT+CGG | + | chr4.3:22614324-22614343 | None:intergenic | 30.0% | |
ATTCAAAACATACCAGTAGA+TGG | + | chr4.3:22614593-22614612 | None:intergenic | 30.0% | |
ATTCCTTCAAAGACATAAAG+TGG | + | chr4.3:22611538-22611557 | None:intergenic | 30.0% | |
ATTCTATTGTGTTTGTGTGT+GGG | + | chr4.3:22614802-22614821 | None:intergenic | 30.0% | |
CACATAAATCTCAAATTGCT+TGG | - | chr4.3:22611941-22611960 | MS.gene052572:intron | 30.0% | |
CATAGTGTAGAAAAATGTAC+AGG | + | chr4.3:22613425-22613444 | None:intergenic | 30.0% | |
CATGCAAATGCAAAAATACT+AGG | + | chr4.3:22612075-22612094 | None:intergenic | 30.0% | |
CTCCATATTAACTTCATTTC+AGG | + | chr4.3:22613173-22613192 | None:intergenic | 30.0% | |
GACGGAAATTGTAAATAAAG+CGG | + | chr4.3:22612830-22612849 | None:intergenic | 30.0% | |
GTCTGGTACAAAAAACAAAA+TGG | - | chr4.3:22613360-22613379 | MS.gene052572:CDS | 30.0% | |
TATTCTTCCAATGGTTATAG+TGG | - | chr4.3:22611982-22612001 | MS.gene052572:CDS | 30.0% | |
TCAAACAAACTTGGTTAAGT+AGG | + | chr4.3:22613274-22613293 | None:intergenic | 30.0% | |
TGCCATCAATATTAACTCTA+TGG | + | chr4.3:22615175-22615194 | None:intergenic | 30.0% | |
TTCAAGCAACTTAAGTAAGT+AGG | - | chr4.3:22613907-22613926 | MS.gene052572:CDS | 30.0% | |
TTGACATGCATGGAAAATAA+TGG | - | chr4.3:22615284-22615303 | MS.gene052572:intron | 30.0% | |
TTGGAAGCTAAACAATTGTA+TGG | + | chr4.3:22614029-22614048 | None:intergenic | 30.0% | |
TTGGTGGAAACATATGAAAA+TGG | - | chr4.3:22612906-22612925 | MS.gene052572:intron | 30.0% | |
TTTCGTCACTTCAAATTTCA+GGG | + | chr4.3:22613310-22613329 | None:intergenic | 30.0% | |
TTTGTGGTATGAATAGAGTT+GGG | + | chr4.3:22611099-22611118 | None:intergenic | 30.0% | |
! | AAAACTATAGAAAGCGCATT+TGG | - | chr4.3:22612489-22612508 | MS.gene052572:intron | 30.0% |
! | AATAGAAGTTGATTATCCAG+TGG | + | chr4.3:22613451-22613470 | None:intergenic | 30.0% |
! | ATAGAAGTTGATTATCCAGT+GGG | + | chr4.3:22613450-22613469 | None:intergenic | 30.0% |
! | CAAGTTTAAAGCCATCAAAA+GGG | + | chr4.3:22614002-22614021 | None:intergenic | 30.0% |
! | TATTTTGTGATTGACATGCA+TGG | - | chr4.3:22615274-22615293 | MS.gene052572:intron | 30.0% |
! | TCAAGTTTAAAGCCATCAAA+AGG | + | chr4.3:22614003-22614022 | None:intergenic | 30.0% |
! | TTGTGACTGACTTTATACAT+TGG | - | chr4.3:22615393-22615412 | MS.gene052572:intron | 30.0% |
! | TTTCATCCAAAAAGTTTGCT+GGG | - | chr4.3:22613976-22613995 | MS.gene052572:CDS | 30.0% |
! | TTTGTAATGTCTTGTTAGTC+TGG | - | chr4.3:22613343-22613362 | MS.gene052572:CDS | 30.0% |
! | TTTTCGTCACTTCAAATTTC+AGG | + | chr4.3:22613311-22613330 | None:intergenic | 30.0% |
! | TTTTGTGGTATGAATAGAGT+TGG | + | chr4.3:22611100-22611119 | None:intergenic | 30.0% |
! | TTTTTATGCTTGGACACATT+GGG | - | chr4.3:22611689-22611708 | MS.gene052572:intron | 30.0% |
!! | AAGAATTACCTCTAAAACCA+AGG | + | chr4.3:22615222-22615241 | None:intergenic | 30.0% |
!! | AGAGCATAGTTGATAATTGT+TGG | + | chr4.3:22613590-22613609 | None:intergenic | 30.0% |
!! | AGTATTTTTGCATTTGCATG+TGG | - | chr4.3:22612075-22612094 | MS.gene052572:CDS | 30.0% |
!! | TCTTTAAAATATCGTTACCC+TGG | - | chr4.3:22612591-22612610 | MS.gene052572:intron | 30.0% |
!! | TTTTCTCTTGGTTTTCTAAC+AGG | - | chr4.3:22615055-22615074 | MS.gene052572:intron | 30.0% |
!!! | AACTTTAGTTTTTGGAACAG+TGG | - | chr4.3:22613697-22613716 | MS.gene052572:CDS | 30.0% |
!!! | ACTTTAGTTTTTGGAACAGT+GGG | - | chr4.3:22613698-22613717 | MS.gene052572:CDS | 30.0% |
!!! | TAACGTAATTTTTGGTTGTC+AGG | - | chr4.3:22611665-22611684 | MS.gene052572:intron | 30.0% |
!!! | TTTTTTATGCTTGGACACAT+TGG | - | chr4.3:22611688-22611707 | MS.gene052572:intron | 30.0% |
AACCTTAACCAATTAAGTGC+AGG | + | chr4.3:22612732-22612751 | None:intergenic | 35.0% | |
AAGGATGTAGTTCAATCATG+TGG | - | chr4.3:22611842-22611861 | MS.gene052572:intron | 35.0% | |
AATTTCAGCATAAGGTGAGA+TGG | - | chr4.3:22613805-22613824 | MS.gene052572:CDS | 35.0% | |
ACATCGAGGAAAATTACATG+AGG | + | chr4.3:22614168-22614187 | None:intergenic | 35.0% | |
ACCTTAACCAATTAAGTGCA+GGG | + | chr4.3:22612731-22612750 | None:intergenic | 35.0% | |
ACTCGAACAAGAATATTTCC+AGG | + | chr4.3:22614105-22614124 | None:intergenic | 35.0% | |
ATATGTTTCCACCAAAACTG+CGG | + | chr4.3:22612901-22612920 | None:intergenic | 35.0% | |
ATGGATAACCTCTACTGATA+TGG | - | chr4.3:22611020-22611039 | MS.gene052572:intron | 35.0% | |
ATTCATAAAATGGGGTCAGT+GGG | - | chr4.3:22612371-22612390 | MS.gene052572:intron | 35.0% | |
ATTGAACTACATCCTTCACT+GGG | + | chr4.3:22611838-22611857 | None:intergenic | 35.0% | |
ATTTCAGCATAAGGTGAGAT+GGG | - | chr4.3:22613806-22613825 | MS.gene052572:CDS | 35.0% | |
CAAATTCTACTTGCAGCAAA+AGG | + | chr4.3:22611605-22611624 | None:intergenic | 35.0% | |
CGCCATAGAGTTAATATTGA+TGG | - | chr4.3:22615170-22615189 | MS.gene052572:intron | 35.0% | |
CTTTCATCCAAAAAGTTTGC+TGG | - | chr4.3:22613975-22613994 | MS.gene052572:CDS | 35.0% | |
GCAACTTAAGTAAGTAGGAT+TGG | - | chr4.3:22613912-22613931 | MS.gene052572:CDS | 35.0% | |
GCATGGAAAATAATGGTGAA+AGG | - | chr4.3:22615291-22615310 | MS.gene052572:intron | 35.0% | |
GCCCTGAAATGAAGTTAATA+TGG | - | chr4.3:22613168-22613187 | MS.gene052572:intron | 35.0% | |
GCTAGAGAAAACTTTCACAA+AGG | - | chr4.3:22611871-22611890 | MS.gene052572:intron | 35.0% | |
GTTTGCATTTGCCTTTATTG+TGG | - | chr4.3:22612194-22612213 | MS.gene052572:intron | 35.0% | |
TACAATCATAACCGATGATC+AGG | - | chr4.3:22614525-22614544 | MS.gene052572:CDS | 35.0% | |
TATGTAGCTATTGTTAGTGG+TGG | - | chr4.3:22613201-22613220 | MS.gene052572:intron | 35.0% | |
TGCACTTAATTGGTTAAGGT+TGG | - | chr4.3:22612731-22612750 | MS.gene052572:intron | 35.0% | |
TGTAGCTAAAACTATGCTCA+GGG | + | chr4.3:22612464-22612483 | None:intergenic | 35.0% | |
TTACAATTTCCGTCAATGGA+GGG | - | chr4.3:22612836-22612855 | MS.gene052572:intron | 35.0% | |
TTACACAATTCAGAGTCTGA+TGG | - | chr4.3:22615523-22615542 | MS.gene052572:intron | 35.0% | |
TTAGAACCTTTATGACCAAG+TGG | - | chr4.3:22613735-22613754 | MS.gene052572:CDS | 35.0% | |
TTCGTCACTTCAAATTTCAG+GGG | + | chr4.3:22613309-22613328 | None:intergenic | 35.0% | |
TTGAGCAATCATATGTACAG+AGG | + | chr4.3:22612013-22612032 | None:intergenic | 35.0% | |
TTTACAATTTCCGTCAATGG+AGG | - | chr4.3:22612835-22612854 | MS.gene052572:intron | 35.0% | |
TTTCTAACAGGAAGTGGAAA+AGG | - | chr4.3:22615067-22615086 | MS.gene052572:intron | 35.0% | |
TTTGCCTTTATTGTGGTAGA+AGG | - | chr4.3:22612201-22612220 | MS.gene052572:intron | 35.0% | |
! | AAGCCACTTTATGTCTTTGA+AGG | - | chr4.3:22611532-22611551 | MS.gene052572:intron | 35.0% |
! | AAGGTTCTAATACCATGTCA+AGG | + | chr4.3:22613725-22613744 | None:intergenic | 35.0% |
! | CATGTAATTTTCCTCGATGT+AGG | - | chr4.3:22614168-22614187 | MS.gene052572:CDS | 35.0% |
! | CATTATGTTGATGAGCTTCA+AGG | - | chr4.3:22612942-22612961 | MS.gene052572:intron | 35.0% |
! | CTTTGTGTGTTGTGTCATTA+AGG | - | chr4.3:22613124-22613143 | MS.gene052572:intron | 35.0% |
! | GCACCATTTGCAGATTATTT+TGG | - | chr4.3:22612285-22612304 | MS.gene052572:intron | 35.0% |
! | GTTGGATGAGTTTTACATGA+AGG | - | chr4.3:22614370-22614389 | MS.gene052572:CDS | 35.0% |
!! | AATTACCTCTAAAACCAAGG+TGG | + | chr4.3:22615219-22615238 | None:intergenic | 35.0% |
!! | AGATTTAGAGTTGGTGCAAT+AGG | + | chr4.3:22614631-22614650 | None:intergenic | 35.0% |
!! | ATTTGATTTTGCCTTGGTGA+TGG | - | chr4.3:22610940-22610959 | MS.gene052572:intron | 35.0% |
!! | CACACAGATATCTGCTTTTA+TGG | + | chr4.3:22611741-22611760 | None:intergenic | 35.0% |
!! | TGAGGCTTTGATTTGAAGAA+CGG | + | chr4.3:22614150-22614169 | None:intergenic | 35.0% |
!!! | GAAAAGGCATTTACCTTTTG+GGG | - | chr4.3:22615083-22615102 | MS.gene052572:intron | 35.0% |
!!! | GGAAAAGGCATTTACCTTTT+GGG | - | chr4.3:22615082-22615101 | MS.gene052572:intron | 35.0% |
!!! | GTTGTCAGGTTTTTTATGCT+TGG | - | chr4.3:22611679-22611698 | MS.gene052572:intron | 35.0% |
!!! | TGGAAAAGGCATTTACCTTT+TGG | - | chr4.3:22615081-22615100 | MS.gene052572:intron | 35.0% |
AAAAGCCAATGACAATGGCT+AGG | + | chr4.3:22614939-22614958 | None:intergenic | 40.0% | |
AAAGTCGCTATGTACGAGTA+TGG | - | chr4.3:22611429-22611448 | MS.gene052572:intron | 40.0% | |
AAGTAATTGCTCCATGCACT+CGG | + | chr4.3:22615138-22615157 | None:intergenic | 40.0% | |
ACAAGTGGATAAACAGGCTT+AGG | + | chr4.3:22612873-22612892 | None:intergenic | 40.0% | |
ACCTTCACTGCAACTAACAT+GGG | + | chr4.3:22612630-22612649 | None:intergenic | 40.0% | |
ACTGCATATATGTCCTGCAT+CGG | + | chr4.3:22611807-22611826 | None:intergenic | 40.0% | |
ACTTGTCCCTACTAAGTCTA+GGG | + | chr4.3:22613238-22613257 | None:intergenic | 40.0% | |
AGCAAAATCAGTCAGATGCA+GGG | - | chr4.3:22612115-22612134 | MS.gene052572:CDS | 40.0% | |
AGGTCCGGCATTCATAAAAT+GGG | - | chr4.3:22612362-22612381 | MS.gene052572:intron | 40.0% | |
AGTGAAATAGATCCGTATGC+AGG | + | chr4.3:22614902-22614921 | None:intergenic | 40.0% | |
AGTTCATCCCTGCACTTAAT+TGG | - | chr4.3:22612721-22612740 | MS.gene052572:intron | 40.0% | |
ATCAGGCTAAAGCATGTGAA+AGG | + | chr4.3:22614770-22614789 | None:intergenic | 40.0% | |
ATGACTCACAATCCTAACCA+AGG | + | chr4.3:22615022-22615041 | None:intergenic | 40.0% | |
ATGAGCTTCAAGGACATGAA+GGG | - | chr4.3:22612952-22612971 | MS.gene052572:intron | 40.0% | |
ATGCACCAAACCATCTACAT+TGG | - | chr4.3:22615354-22615373 | MS.gene052572:intron | 40.0% | |
ATTCTCTCCAAGCATACTGA+TGG | - | chr4.3:22612263-22612282 | MS.gene052572:intron | 40.0% | |
CAAGTGGATAAACAGGCTTA+GGG | + | chr4.3:22612872-22612891 | None:intergenic | 40.0% | |
CAATATAAGCCTTCGGATCA+GGG | + | chr4.3:22614317-22614336 | None:intergenic | 40.0% | |
CAGTATAAGTTTCCCAGTGA+AGG | - | chr4.3:22611823-22611842 | MS.gene052572:intron | 40.0% | |
CATTCATAAAATGGGGTCAG+TGG | - | chr4.3:22612370-22612389 | MS.gene052572:intron | 40.0% | |
GATTGAACTACATCCTTCAC+TGG | + | chr4.3:22611839-22611858 | None:intergenic | 40.0% | |
GGATTGAATTCTTGACCACT+TGG | + | chr4.3:22613753-22613772 | None:intergenic | 40.0% | |
GGGCCAAAATAATCTGCAAA+TGG | + | chr4.3:22612291-22612310 | None:intergenic | 40.0% | |
GGTAGATCCACTATAACCAT+TGG | + | chr4.3:22611992-22612011 | None:intergenic | 40.0% | |
GTAAAGTCTAAGTACGAGGA+AGG | + | chr4.3:22613626-22613645 | None:intergenic | 40.0% | |
GTAGCTAAAACTATGCTCAG+GGG | + | chr4.3:22612463-22612482 | None:intergenic | 40.0% | |
GTGAAATAGATCCGTATGCA+GGG | + | chr4.3:22614901-22614920 | None:intergenic | 40.0% | |
GTGTAGCTAAAACTATGCTC+AGG | + | chr4.3:22612465-22612484 | None:intergenic | 40.0% | |
TACTTGTCCCTACTAAGTCT+AGG | + | chr4.3:22613239-22613258 | None:intergenic | 40.0% | |
TAGCGATCGGGTAAATTTAG+TGG | - | chr4.3:22614212-22614231 | MS.gene052572:CDS | 40.0% | |
TATGTTTCCACCAAAACTGC+GGG | + | chr4.3:22612900-22612919 | None:intergenic | 40.0% | |
TCAATATAAGCCTTCGGATC+AGG | + | chr4.3:22614318-22614337 | None:intergenic | 40.0% | |
TCCCTGCACTTAATTGGTTA+AGG | - | chr4.3:22612727-22612746 | MS.gene052572:intron | 40.0% | |
TCTTGACCACTTGGTCATAA+AGG | + | chr4.3:22613744-22613763 | None:intergenic | 40.0% | |
TGATCCGAAGGCTTATATTG+AGG | - | chr4.3:22614317-22614336 | MS.gene052572:CDS | 40.0% | |
TGGCAATGTTTGTACTGTCA+TGG | - | chr4.3:22615190-22615209 | MS.gene052572:intron | 40.0% | |
TGTCTCCATCACATTATACC+CGG | + | chr4.3:22615459-22615478 | None:intergenic | 40.0% | |
TGTGGGAGAATCTATCAGAA+GGG | - | chr4.3:22612662-22612681 | MS.gene052572:intron | 40.0% | |
TGTGTTTGTGTGTGGGTATT+GGG | + | chr4.3:22614795-22614814 | None:intergenic | 40.0% | |
TTAGGTGAGCTGTATCTAAC+AGG | + | chr4.3:22613676-22613695 | None:intergenic | 40.0% | |
TTGTGTATGAGTGCACAAGA+TGG | - | chr4.3:22612159-22612178 | MS.gene052572:CDS | 40.0% | |
TTGTGTTTGTGTGTGGGTAT+TGG | + | chr4.3:22614796-22614815 | None:intergenic | 40.0% | |
TTTCTACACTATGAACCCAC+TGG | - | chr4.3:22613432-22613451 | MS.gene052572:CDS | 40.0% | |
! | GCACTCATACACAAAGCATT+TGG | + | chr4.3:22612153-22612172 | None:intergenic | 40.0% |
! | GCTCGTAAATTTTGTGGGTA+TGG | - | chr4.3:22611062-22611081 | MS.gene052572:CDS | 40.0% |
! | TGACCCCATTTTATGAATGC+CGG | + | chr4.3:22612369-22612388 | None:intergenic | 40.0% |
! | TTCACAAAGGCCGTTCTTTT+TGG | - | chr4.3:22611884-22611903 | MS.gene052572:intron | 40.0% |
! | TTTTGCCTAGCCATTGTCAT+TGG | - | chr4.3:22614931-22614950 | MS.gene052572:intron | 40.0% |
!! | AAAAGCGCTCTTGCTCATAT+TGG | - | chr4.3:22612978-22612997 | MS.gene052572:intron | 40.0% |
!! | CCCATATTTTAAGCCCCAAA+GGG | - | chr4.3:22613840-22613859 | MS.gene052572:CDS | 40.0% |
!! | CCCTTTGGGGCTTAAAATAT+GGG | + | chr4.3:22613843-22613862 | None:intergenic | 40.0% |
!! | CTGGTATGTTTTGAATCACG+CGG | - | chr4.3:22614597-22614616 | MS.gene052572:intron | 40.0% |
!! | CTTGGTTTTCTAACAGGAAG+TGG | - | chr4.3:22615061-22615080 | MS.gene052572:intron | 40.0% |
!! | TGCACTTTTGAAGATGCTTC+TGG | - | chr4.3:22613007-22613026 | MS.gene052572:intron | 40.0% |
!! | TGGTATGTTTTGAATCACGC+GGG | - | chr4.3:22614598-22614617 | MS.gene052572:intron | 40.0% |
!!! | TTTGGCTCGTTCTTGTTTTC+TGG | - | chr4.3:22612047-22612066 | MS.gene052572:CDS | 40.0% |
AAAACTATGCTCAGGGGCTT+TGG | + | chr4.3:22612457-22612476 | None:intergenic | 45.0% | |
ACAACTCCACTACTCAGTTG+AGG | - | chr4.3:22611480-22611499 | MS.gene052572:intron | 45.0% | |
ACCTCTACTGATATGGAGTC+TGG | - | chr4.3:22611027-22611046 | MS.gene052572:intron | 45.0% | |
AGTTCAGGAAAATGTGGCTC+CGG | - | chr4.3:22612313-22612332 | MS.gene052572:intron | 45.0% | |
ATTCATGCAGACATGCATCC+TGG | - | chr4.3:22614084-22614103 | MS.gene052572:CDS | 45.0% | |
CAGCAAAATCAGTCAGATGC+AGG | - | chr4.3:22612114-22612133 | MS.gene052572:CDS | 45.0% | |
CAGGCCTTCTACCACAATAA+AGG | + | chr4.3:22612208-22612227 | None:intergenic | 45.0% | |
CAGGTCCGGCATTCATAAAA+TGG | - | chr4.3:22612361-22612380 | MS.gene052572:intron | 45.0% | |
CATCGTACACTAGAAAGAGC+AGG | - | chr4.3:22612342-22612361 | MS.gene052572:intron | 45.0% | |
CCAAGACCCTAGACTTAGTA+GGG | - | chr4.3:22613229-22613248 | MS.gene052572:intron | 45.0% | |
CCTCGTAAAGTCTAAGTACG+AGG | + | chr4.3:22613630-22613649 | None:intergenic | 45.0% | |
CCTCGTACTTAGACTTTACG+AGG | - | chr4.3:22613627-22613646 | MS.gene052572:CDS | 45.0% | |
CTAGTGTACGATGAACAACC+CGG | + | chr4.3:22612335-22612354 | None:intergenic | 45.0% | |
CTTTATTGTGGTAGAAGGCC+TGG | - | chr4.3:22612206-22612225 | MS.gene052572:intron | 45.0% | |
GAAGAATTGCCTGTTGCATC+TGG | - | chr4.3:22612543-22612562 | MS.gene052572:intron | 45.0% | |
GACCTTCACTGCAACTAACA+TGG | + | chr4.3:22612631-22612650 | None:intergenic | 45.0% | |
GATGAGCTTCAAGGACATGA+AGG | - | chr4.3:22612951-22612970 | MS.gene052572:intron | 45.0% | |
GCAATACTTCCAGATGCAAC+AGG | + | chr4.3:22612555-22612574 | None:intergenic | 45.0% | |
GCTAAAGCATGTGAAAGGTG+AGG | + | chr4.3:22614765-22614784 | None:intergenic | 45.0% | |
GGATGCACAAGTGGATAAAC+AGG | + | chr4.3:22612879-22612898 | None:intergenic | 45.0% | |
GGCACTGCATTACAGAATGA+GGG | - | chr4.3:22610968-22610987 | MS.gene052572:intron | 45.0% | |
GGTCCGGCATTCATAAAATG+GGG | - | chr4.3:22612363-22612382 | MS.gene052572:intron | 45.0% | |
GTCTCCATCACATTATACCC+GGG | + | chr4.3:22615458-22615477 | None:intergenic | 45.0% | |
GTGTGGGAGAATCTATCAGA+AGG | - | chr4.3:22612661-22612680 | MS.gene052572:intron | 45.0% | |
TAAAGACGCACGATGCACTT+GGG | + | chr4.3:22612577-22612596 | None:intergenic | 45.0% | |
TACACTAGAAAGAGCAGGTC+CGG | - | chr4.3:22612347-22612366 | MS.gene052572:intron | 45.0% | |
TATCCATACCCTTACCTCCT+GGG | + | chr4.3:22611407-22611426 | None:intergenic | 45.0% | |
TATGCTTGGACACATTGGGA+GGG | - | chr4.3:22611693-22611712 | MS.gene052572:intron | 45.0% | |
TCCAACACGTGTATTGGGAT+GGG | - | chr4.3:22614677-22614696 | MS.gene052572:intron | 45.0% | |
TCGTCTTCTTGACCATCTAC+TGG | - | chr4.3:22614578-22614597 | MS.gene052572:CDS | 45.0% | |
TGATCCCGGGTATAATGTGA+TGG | - | chr4.3:22615451-22615470 | MS.gene052572:intron | 45.0% | |
TGGCACTGCATTACAGAATG+AGG | - | chr4.3:22610967-22610986 | MS.gene052572:intron | 45.0% | |
TGTAGTTCAATCATGTGGCG+AGG | - | chr4.3:22611847-22611866 | MS.gene052572:intron | 45.0% | |
TGTCAGCAGAAATGCAGGTT+TGG | - | chr4.3:22611759-22611778 | MS.gene052572:intron | 45.0% | |
TGTTAGTTGCAGTGAAGGTC+AGG | - | chr4.3:22612631-22612650 | MS.gene052572:intron | 45.0% | |
TTAAAGACGCACGATGCACT+TGG | + | chr4.3:22612578-22612597 | None:intergenic | 45.0% | |
TTATGCTTGGACACATTGGG+AGG | - | chr4.3:22611692-22611711 | MS.gene052572:intron | 45.0% | |
TTGCGTCCAACACGTGTATT+GGG | - | chr4.3:22614672-22614691 | MS.gene052572:intron | 45.0% | |
TTTCCTCGATGTAGGCATGA+CGG | - | chr4.3:22614176-22614195 | MS.gene052572:CDS | 45.0% | |
! | AAAGGGCCCAGCAAACTTTT+TGG | + | chr4.3:22613985-22614004 | None:intergenic | 45.0% |
! | AAGAAGACGCGTCAGTGTTT+TGG | + | chr4.3:22614048-22614067 | None:intergenic | 45.0% |
! | AGCCACATTTTCCTGAACTC+GGG | + | chr4.3:22612312-22612331 | None:intergenic | 45.0% |
! | ATTGCTGCTTAGAGCTGACT+GGG | - | chr4.3:22615487-22615506 | MS.gene052572:intron | 45.0% |
! | GAGCCACATTTTCCTGAACT+CGG | + | chr4.3:22612313-22612332 | None:intergenic | 45.0% |
! | TCGCTTTGAACTCCTTGGTT+AGG | - | chr4.3:22615007-22615026 | MS.gene052572:intron | 45.0% |
! | TTCACTCGCTTTGAACTCCT+TGG | - | chr4.3:22615002-22615021 | MS.gene052572:intron | 45.0% |
! | TTGATGGTAGACCCTGCATA+CGG | - | chr4.3:22614887-22614906 | MS.gene052572:intron | 45.0% |
!! | AATGGTGCCATCAGTATGCT+TGG | + | chr4.3:22612273-22612292 | None:intergenic | 45.0% |
!! | AGAGTTGGTGCAATAGGTGA+GGG | + | chr4.3:22614625-22614644 | None:intergenic | 45.0% |
!! | GCCCATATTTTAAGCCCCAA+AGG | - | chr4.3:22613839-22613858 | MS.gene052572:CDS | 45.0% |
!! | GCCCTTTGGGGCTTAAAATA+TGG | + | chr4.3:22613844-22613863 | None:intergenic | 45.0% |
!! | GTCCTGCATCGGTTGATATT+GGG | + | chr4.3:22611796-22611815 | None:intergenic | 45.0% |
!! | GTCTCAAGTTGACCTTGCAA+GGG | - | chr4.3:22612788-22612807 | MS.gene052572:intron | 45.0% |
!! | TAGAAGGCCTGGTCTTGTTA+GGG | - | chr4.3:22612217-22612236 | MS.gene052572:intron | 45.0% |
!! | TAGAGTTGGTGCAATAGGTG+AGG | + | chr4.3:22614626-22614645 | None:intergenic | 45.0% |
!! | TGTCCTGCATCGGTTGATAT+TGG | + | chr4.3:22611797-22611816 | None:intergenic | 45.0% |
!! | TGTCTCAAGTTGACCTTGCA+AGG | - | chr4.3:22612787-22612806 | MS.gene052572:intron | 45.0% |
!! | TGTGTGGGTATTGGGTAATC+AGG | + | chr4.3:22614787-22614806 | None:intergenic | 45.0% |
!! | TTTGCCTTGGTGATGGTTTG+TGG | - | chr4.3:22610947-22610966 | MS.gene052572:intron | 45.0% |
!!! | ATTATTTTGGCCCCGAGTTC+AGG | - | chr4.3:22612298-22612317 | MS.gene052572:intron | 45.0% |
AAAACTGCGGGATGCACAAG+TGG | + | chr4.3:22612888-22612907 | None:intergenic | 50.0% | |
AACAAGAACGAGCCAAAGCC+AGG | + | chr4.3:22612044-22612063 | None:intergenic | 50.0% | |
AAGACACGTCCCTCCATTGA+CGG | + | chr4.3:22612848-22612867 | None:intergenic | 50.0% | |
AATGAGCAGCTTCCCTTGCA+AGG | + | chr4.3:22612803-22612822 | None:intergenic | 50.0% | |
ACACTGACGCGTCTTCTTTC+AGG | - | chr4.3:22614050-22614069 | MS.gene052572:CDS | 50.0% | |
ACCTTCTCGAGTTCCCCAAA+AGG | + | chr4.3:22615099-22615118 | None:intergenic | 50.0% | |
ACTCCACTACTCAGTTGAGG+AGG | - | chr4.3:22611483-22611502 | MS.gene052572:intron | 50.0% | |
AGTGCCACAAACCATCACCA+AGG | + | chr4.3:22610954-22610973 | None:intergenic | 50.0% | |
ATACAGTGCCCAGGAGGTAA+GGG | - | chr4.3:22611396-22611415 | MS.gene052572:intron | 50.0% | |
CACCCAATATCAACCGATGC+AGG | - | chr4.3:22611791-22611810 | MS.gene052572:intron | 50.0% | |
CATAAAATGGGGTCAGTGGG+CGG | - | chr4.3:22612374-22612393 | MS.gene052572:intron | 50.0% | |
CTATCCATACCCTTACCTCC+TGG | + | chr4.3:22611408-22611427 | None:intergenic | 50.0% | |
CTCCACTACTCAGTTGAGGA+GGG | - | chr4.3:22611484-22611503 | MS.gene052572:intron | 50.0% | |
CTGATAGATTCTCCCACACC+AGG | + | chr4.3:22612660-22612679 | None:intergenic | 50.0% | |
CTGTGTGTCAGCAGAAATGC+AGG | - | chr4.3:22611754-22611773 | MS.gene052572:intron | 50.0% | |
GCCAAGACCCTAGACTTAGT+AGG | - | chr4.3:22613228-22613247 | MS.gene052572:intron | 50.0% | |
GCCAGACTCCATATCAGTAG+AGG | + | chr4.3:22611031-22611050 | None:intergenic | 50.0% | |
GCCCATGTTAGTTGCAGTGA+AGG | - | chr4.3:22612626-22612645 | MS.gene052572:intron | 50.0% | |
GTCCAACACGTGTATTGGGA+TGG | - | chr4.3:22614676-22614695 | MS.gene052572:intron | 50.0% | |
GTCGCTATGTACGAGTATGG+AGG | - | chr4.3:22611432-22611451 | MS.gene052572:intron | 50.0% | |
GTTCAGGAAAATGTGGCTCC+GGG | - | chr4.3:22612314-22612333 | MS.gene052572:intron | 50.0% | |
GTTGCGTCCAACACGTGTAT+TGG | - | chr4.3:22614671-22614690 | MS.gene052572:intron | 50.0% | |
TACTGTCATGGTGACCACCT+TGG | - | chr4.3:22615202-22615221 | MS.gene052572:intron | 50.0% | |
TAGCTCTCCCTAACAAGACC+AGG | + | chr4.3:22612227-22612246 | None:intergenic | 50.0% | |
TCCACTACTCAGTTGAGGAG+GGG | - | chr4.3:22611485-22611504 | MS.gene052572:intron | 50.0% | |
TCCCATCCCAATACACGTGT+TGG | + | chr4.3:22614681-22614700 | None:intergenic | 50.0% | |
TGCATGTGGAGAGCTAGCAT+TGG | - | chr4.3:22612089-22612108 | MS.gene052572:CDS | 50.0% | |
! | ACTTGTGCATCCCGCAGTTT+TGG | - | chr4.3:22612887-22612906 | MS.gene052572:intron | 50.0% |
! | CATTGCTGCTTAGAGCTGAC+TGG | - | chr4.3:22615486-22615505 | MS.gene052572:intron | 50.0% |
! | CCCTACTAAGTCTAGGGTCT+TGG | + | chr4.3:22613232-22613251 | None:intergenic | 50.0% |
! | CTGAACTCTCTGGTAGCGAT+CGG | - | chr4.3:22614199-22614218 | MS.gene052572:CDS | 50.0% |
! | GCCACATTTTCCTGAACTCG+GGG | + | chr4.3:22612311-22612330 | None:intergenic | 50.0% |
! | TGAACTCTCTGGTAGCGATC+GGG | - | chr4.3:22614200-22614219 | MS.gene052572:CDS | 50.0% |
! | TTACCTCCTGGGCACTGTAT+CGG | + | chr4.3:22611396-22611415 | None:intergenic | 50.0% |
!! | ACCTTTTGGGGAACTCGAGA+AGG | - | chr4.3:22615095-22615114 | MS.gene052572:intron | 50.0% |
!! | GTAGAAGGCCTGGTCTTGTT+AGG | - | chr4.3:22612216-22612235 | MS.gene052572:intron | 50.0% |
!!! | AGTTTGCTGGGCCCTTTTGA+TGG | - | chr4.3:22613988-22614007 | MS.gene052572:CDS | 50.0% |
!!! | GGTGACCACCTTGGTTTTAG+AGG | - | chr4.3:22615211-22615230 | MS.gene052572:intron | 50.0% |
AAAGCTGTTGCCCGCAGAGA+TGG | - | chr4.3:22614243-22614262 | MS.gene052572:CDS | 55.0% | |
AAGGTCAGGCATCCTGGTGT+GGG | - | chr4.3:22612645-22612664 | MS.gene052572:intron | 55.0% | |
AATTGCTCCATGCACTCGGC+TGG | + | chr4.3:22615134-22615153 | None:intergenic | 55.0% | |
ACAGAACTGCCCTGATCCGA+AGG | - | chr4.3:22614305-22614324 | MS.gene052572:CDS | 55.0% | |
ACCCCTCCTCAACTGAGTAG+TGG | + | chr4.3:22611489-22611508 | None:intergenic | 55.0% | |
ACGCAACTGGGCGATCTTGA+TGG | - | chr4.3:22614871-22614890 | MS.gene052572:intron | 55.0% | |
ATTGCTCCATGCACTCGGCT+GGG | + | chr4.3:22615133-22615152 | None:intergenic | 55.0% | |
CCCAAAGGGCTCTTGCATGA+GGG | - | chr4.3:22613854-22613873 | MS.gene052572:CDS | 55.0% | |
CCCTCATGCAAGAGCCCTTT+GGG | + | chr4.3:22613857-22613876 | None:intergenic | 55.0% | |
CCTCATGCAAGAGCCCTTTG+GGG | + | chr4.3:22613856-22613875 | None:intergenic | 55.0% | |
CTAGTTCCGATACAGTGCCC+AGG | - | chr4.3:22611387-22611406 | MS.gene052572:intron | 55.0% | |
CTGACGCGTCTTCTTTCAGG+TGG | - | chr4.3:22614053-22614072 | MS.gene052572:CDS | 55.0% | |
GATACAGTGCCCAGGAGGTA+AGG | - | chr4.3:22611395-22611414 | MS.gene052572:intron | 55.0% | |
GATTGCTCAAGCAGTGAGCC+TGG | - | chr4.3:22612023-22612042 | MS.gene052572:CDS | 55.0% | |
GCCCCGAGTTCAGGAAAATG+TGG | - | chr4.3:22612307-22612326 | MS.gene052572:intron | 55.0% | |
GGAACAGTGGGTCCTTGACA+TGG | - | chr4.3:22613710-22613729 | MS.gene052572:CDS | 55.0% | |
TCAAGCAGTGAGCCTGGCTT+TGG | - | chr4.3:22612029-22612048 | MS.gene052572:CDS | 55.0% | |
TCCCTCATGCAAGAGCCCTT+TGG | + | chr4.3:22613858-22613877 | None:intergenic | 55.0% | |
TGTTCGAGTGCCTCAGAGCA+AGG | - | chr4.3:22614116-22614135 | MS.gene052572:CDS | 55.0% | |
! | ATGGGCTTTGCTTGCTGACC+AGG | + | chr4.3:22612612-22612631 | None:intergenic | 55.0% |
! | TGGGCTTTGCTTGCTGACCA+GGG | + | chr4.3:22612611-22612630 | None:intergenic | 55.0% |
!! | TGTGCATCCCGCAGTTTTGG+TGG | - | chr4.3:22612890-22612909 | MS.gene052572:intron | 55.0% |
CAGCCGTCATGCCTACATCG+AGG | + | chr4.3:22614182-22614201 | None:intergenic | 60.0% | |
CCCCAAAGGGCTCTTGCATG+AGG | - | chr4.3:22613853-22613872 | MS.gene052572:CDS | 60.0% | |
CCTGAGTGTGCACTCAGCAG+CGG | + | chr4.3:22614274-22614293 | None:intergenic | 60.0% | |
CTGTTGCCCGCAGAGATGGT+CGG | - | chr4.3:22614247-22614266 | MS.gene052572:CDS | 60.0% | |
GAAGGTCAGGCATCCTGGTG+TGG | - | chr4.3:22612644-22612663 | MS.gene052572:intron | 60.0% | |
GCAGTGAAGGTCAGGCATCC+TGG | - | chr4.3:22612639-22612658 | MS.gene052572:intron | 60.0% | |
GGCATGACGGCTGAACTCTC+TGG | - | chr4.3:22614189-22614208 | MS.gene052572:CDS | 60.0% | |
GGGAACTCGAGAAGGTGACG+CGG | - | chr4.3:22615103-22615122 | MS.gene052572:intron | 60.0% | |
GGTTTGCGAGCCTTGCTCTG+AGG | + | chr4.3:22614129-22614148 | None:intergenic | 60.0% | |
GTGCCCAGGAGGTAAGGGTA+TGG | - | chr4.3:22611401-22611420 | MS.gene052572:intron | 60.0% | |
GTTCCGATACAGTGCCCAGG+AGG | - | chr4.3:22611390-22611409 | MS.gene052572:intron | 60.0% | |
TGGCAGCGCAAGCTTGATCC+CGG | - | chr4.3:22615437-22615456 | MS.gene052572:intron | 60.0% | |
AGCGGTCCGACCATCTCTGC+GGG | + | chr4.3:22614256-22614275 | None:intergenic | 65.0% | |
CAGCGGTCCGACCATCTCTG+CGG | + | chr4.3:22614257-22614276 | None:intergenic | 65.0% | |
CCGCTGCTGAGTGCACACTC+AGG | - | chr4.3:22614271-22614290 | MS.gene052572:CDS | 65.0% | |
GGCAGCGCAAGCTTGATCCC+GGG | - | chr4.3:22615438-22615457 | MS.gene052572:intron | 65.0% | |
GGTTCACCCAGCCGAGTGCA+TGG | - | chr4.3:22615124-22615143 | MS.gene052572:intron | 65.0% | |
GGGGTCAGTGGGCGGCTACA+CGG | - | chr4.3:22612382-22612401 | MS.gene052572:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 22610731 | 22615553 | 22610731 | ID=MS.gene052572 |
chr4.3 | mRNA | 22610731 | 22615553 | 22610731 | ID=MS.gene052572.t1;Parent=MS.gene052572 |
chr4.3 | exon | 22615546 | 22615553 | 22615546 | ID=MS.gene052572.t1.exon1;Parent=MS.gene052572.t1 |
chr4.3 | CDS | 22615546 | 22615553 | 22615546 | ID=cds.MS.gene052572.t1;Parent=MS.gene052572.t1 |
chr4.3 | exon | 22613256 | 22614597 | 22613256 | ID=MS.gene052572.t1.exon2;Parent=MS.gene052572.t1 |
chr4.3 | CDS | 22613256 | 22614597 | 22613256 | ID=cds.MS.gene052572.t1;Parent=MS.gene052572.t1 |
chr4.3 | exon | 22611946 | 22612212 | 22611946 | ID=MS.gene052572.t1.exon3;Parent=MS.gene052572.t1 |
chr4.3 | CDS | 22611946 | 22612212 | 22611946 | ID=cds.MS.gene052572.t1;Parent=MS.gene052572.t1 |
chr4.3 | exon | 22611052 | 22611207 | 22611052 | ID=MS.gene052572.t1.exon4;Parent=MS.gene052572.t1 |
chr4.3 | CDS | 22611052 | 22611207 | 22611052 | ID=cds.MS.gene052572.t1;Parent=MS.gene052572.t1 |
chr4.3 | exon | 22610731 | 22610850 | 22610731 | ID=MS.gene052572.t1.exon5;Parent=MS.gene052572.t1 |
chr4.3 | CDS | 22610731 | 22610850 | 22610731 | ID=cds.MS.gene052572.t1;Parent=MS.gene052572.t1 |
Gene Sequence |
Protein sequence |