AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene052573

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052573.t1 MTR_4g091520 92.961 966 61 6 65 1027 215 1176 0.0 1819
MS.gene052573.t1 MTR_4g091520 98.462 65 1 0 1 65 1 65 1.35e-32 137
MS.gene052573.t1 MTR_4g091520 92.961 966 61 6 65 1027 215 1176 0.0 1816
MS.gene052573.t1 MTR_4g091520 98.462 65 1 0 1 65 1 65 1.31e-32 137
MS.gene052573.t1 MTR_4g091520 89.223 965 64 5 65 1027 215 1141 0.0 1735
MS.gene052573.t1 MTR_4g091520 98.462 65 1 0 1 65 1 65 1.15e-32 137
MS.gene052573.t1 MTR_4g091520 91.121 642 54 2 387 1027 467 1106 0.0 1191
MS.gene052573.t1 MTR_4g091520 88.961 462 47 4 65 524 215 674 0.0 817
MS.gene052573.t1 MTR_4g091520 79.439 107 21 1 488 594 464 569 1.27e-40 163
MS.gene052573.t1 MTR_4g091520 98.462 65 1 0 1 65 1 65 1.29e-32 137
MS.gene052573.t1 MTR_2g011630 57.717 473 172 6 558 1027 163 610 1.96e-175 530
MS.gene052573.t1 MTR_2g011630 54.118 170 77 1 183 351 31 200 4.89e-45 175
MS.gene052573.t1 MTR_2g011630 57.717 473 172 6 558 1027 195 642 7.21e-175 530
MS.gene052573.t1 MTR_2g011630 54.118 170 77 1 183 351 63 232 8.80e-45 174
MS.gene052573.t1 MTR_2g011630 57.717 473 172 6 558 1027 407 854 8.00e-172 528
MS.gene052573.t1 MTR_2g011630 54.965 282 113 5 72 351 175 444 2.14e-80 283
MS.gene052573.t1 MTR_2g011630 69.492 59 18 0 6 64 4 62 9.42e-19 92.8
MS.gene052573.t1 MTR_7g117445 37.225 454 256 10 577 1014 369 809 3.05e-74 263
MS.gene052573.t1 MTR_7g117445 29.643 280 161 7 110 386 140 386 3.03e-29 126
MS.gene052573.t1 MTR_7g117445 37.225 454 256 10 577 1014 369 809 3.64e-74 264
MS.gene052573.t1 MTR_7g117445 29.643 280 161 7 110 386 140 386 3.18e-29 126
MS.gene052573.t1 MTR_7g117445 37.225 454 256 10 577 1014 369 809 3.67e-74 264
MS.gene052573.t1 MTR_7g117445 29.643 280 161 7 110 386 140 386 3.52e-29 126
MS.gene052573.t1 MTR_7g117445 37.225 454 256 10 577 1014 369 809 6.21e-74 264
MS.gene052573.t1 MTR_7g117445 29.643 280 161 7 110 386 140 386 4.21e-29 126
MS.gene052573.t1 MTR_1g114150 42.345 307 158 7 570 866 557 854 2.52e-64 236
MS.gene052573.t1 MTR_1g114150 35.057 174 106 2 110 282 343 510 4.42e-26 116
MS.gene052573.t1 MTR_1g114150 42.345 307 158 7 570 866 557 854 7.83e-64 235
MS.gene052573.t1 MTR_1g114150 35.227 176 103 3 110 282 343 510 4.34e-26 116
MS.gene052573.t1 MTR_1g069565 34.899 447 231 13 577 1013 367 763 1.43e-63 233
MS.gene052573.t1 MTR_1g069565 34.328 201 121 5 110 305 144 338 6.08e-21 99.8
MS.gene052573.t1 MTR_1g069565 34.899 447 231 13 577 1013 367 763 2.38e-63 233
MS.gene052573.t1 MTR_1g069565 34.328 201 121 5 110 305 144 338 7.36e-21 99.4
MS.gene052573.t1 MTR_1g114130 42.667 300 156 7 577 866 548 841 1.18e-61 229
MS.gene052573.t1 MTR_1g114130 34.568 162 93 3 110 267 327 479 4.85e-22 103
MS.gene052573.t1 MTR_1g114070 41.892 296 163 5 577 866 447 739 1.53e-60 225
MS.gene052573.t1 MTR_1g114070 36.478 159 94 3 110 267 225 377 7.83e-22 102
MS.gene052573.t1 MTR_1g008060 42.086 278 151 6 577 849 1058 1330 2.76e-60 226
MS.gene052573.t1 MTR_1g008060 32.653 196 114 5 99 287 850 1034 3.21e-23 107
MS.gene052573.t1 MTR_1g008060 42.086 278 151 6 577 849 1067 1339 3.03e-60 226
MS.gene052573.t1 MTR_1g008060 32.653 196 114 5 99 287 859 1043 3.30e-23 107
MS.gene052573.t1 MTR_5g065200 38.384 297 172 5 577 866 363 655 5.05e-58 215
MS.gene052573.t1 MTR_5g065200 31.746 189 121 3 80 267 112 293 9.14e-23 105
MS.gene052573.t1 MTR_4g132540 30.995 442 229 10 577 1013 378 748 5.70e-52 197
MS.gene052573.t1 MTR_4g132540 33.871 248 142 7 108 351 166 395 2.81e-31 132
MS.gene052573.t1 MTR_1g083120 30.377 451 251 11 572 1014 385 780 5.99e-51 194
MS.gene052573.t1 MTR_1g083120 29.098 244 139 8 110 352 198 408 2.01e-23 107
MS.gene052573.t1 MTR_1g083120 30.377 451 251 11 572 1014 385 780 6.38e-51 194
MS.gene052573.t1 MTR_1g083120 29.098 244 139 8 110 352 198 408 1.53e-23 107
MS.gene052573.t1 MTR_1g083120 30.377 451 251 11 572 1014 385 780 9.57e-51 194
MS.gene052573.t1 MTR_1g083120 29.098 244 139 8 110 352 198 408 1.63e-23 108
MS.gene052573.t1 MTR_1g083120 30.377 451 251 11 572 1014 402 797 1.19e-50 194
MS.gene052573.t1 MTR_1g083120 29.098 244 139 8 110 352 215 425 1.78e-23 107
MS.gene052573.t1 MTR_2g024270 33.433 335 197 6 586 916 370 682 3.11e-43 170
MS.gene052573.t1 MTR_2g024270 36.757 185 106 4 105 288 150 324 2.05e-25 114
MS.gene052573.t1 MTR_5g047620 37.847 288 160 9 590 866 307 586 3.71e-43 170
MS.gene052573.t1 MTR_5g047620 36.364 88 55 1 197 283 157 244 2.01e-11 68.6
MS.gene052573.t1 MTR_2g024140 36.275 306 159 5 568 868 238 512 2.73e-42 166
MS.gene052573.t1 MTR_2g024140 33.203 256 153 6 103 355 28 268 5.54e-31 130
MS.gene052573.t1 MTR_0020s0100 34.875 281 154 10 577 847 242 503 3.08e-37 150
MS.gene052573.t1 MTR_8g465700 41.071 168 94 2 675 840 13 177 9.23e-33 129
MS.gene052573.t1 MTR_2g024240 47.260 146 74 2 730 873 114 258 1.20e-29 122
MS.gene052573.t1 MTR_0295s0020 48.462 130 63 3 739 865 30 158 1.89e-28 113
MS.gene052573.t1 MTR_8g062940 32.738 168 106 3 109 275 32 193 8.54e-20 93.2
MS.gene052573.t1 MTR_8g013920 46.988 83 38 3 755 835 40 118 6.27e-13 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052573.t1 AT4G00990 34.038 473 267 12 551 1009 268 709 1.51e-73 259
MS.gene052573.t1 AT4G00990 29.329 283 139 9 110 386 80 307 3.45e-25 113
MS.gene052573.t1 AT4G00990 33.827 473 268 11 551 1009 268 709 1.58e-73 259
MS.gene052573.t1 AT4G00990 29.329 283 139 9 110 386 80 307 3.49e-25 113
MS.gene052573.t1 AT4G00990 33.895 475 269 12 551 1011 268 711 3.97e-73 259
MS.gene052573.t1 AT4G00990 29.329 283 139 9 110 386 80 307 4.45e-25 112
MS.gene052573.t1 AT4G21430 43.986 291 151 5 579 864 412 695 4.59e-71 255
MS.gene052573.t1 AT4G21430 39.423 208 117 4 65 269 181 382 5.12e-34 141
MS.gene052573.t1 AT4G21430 53.704 54 25 0 11 64 5 58 3.01e-11 68.2
MS.gene052573.t1 AT1G62310 42.671 307 162 5 577 878 424 721 1.77e-64 235
MS.gene052573.t1 AT1G62310 31.541 279 143 7 110 386 209 441 1.52e-30 130
MS.gene052573.t1 AT1G11950 36.815 383 226 6 562 938 391 763 5.05e-63 230
MS.gene052573.t1 AT1G11950 27.723 303 173 7 110 383 176 461 1.42e-23 108
MS.gene052573.t1 AT1G11950 36.815 383 226 6 562 938 391 763 7.59e-63 230
MS.gene052573.t1 AT1G11950 27.723 303 173 7 110 383 176 461 1.69e-23 107
MS.gene052573.t1 AT1G11950 36.815 383 226 6 562 938 391 763 7.59e-63 230
MS.gene052573.t1 AT1G11950 27.723 303 173 7 110 383 176 461 1.69e-23 107
MS.gene052573.t1 AT3G07610 38.790 281 164 5 587 861 429 707 2.99e-51 196
MS.gene052573.t1 AT3G07610 31.977 172 109 4 110 280 155 319 3.65e-20 97.4
MS.gene052573.t1 AT3G07610 39.080 261 151 5 587 841 429 687 2.90e-46 179
MS.gene052573.t1 AT3G07610 31.977 172 109 4 110 280 155 319 5.50e-20 96.3
MS.gene052573.t1 AT3G07610 38.996 259 150 5 587 839 429 685 1.26e-45 179
MS.gene052573.t1 AT3G07610 31.977 172 109 4 110 280 155 319 3.46e-20 97.4
MS.gene052573.t1 AT1G09060 27.252 444 247 11 577 1013 418 792 5.39e-34 141
MS.gene052573.t1 AT1G09060 28.279 244 147 5 110 352 220 436 1.03e-25 115
MS.gene052573.t1 AT1G09060 27.252 444 247 11 577 1013 418 792 5.39e-34 141
MS.gene052573.t1 AT1G09060 28.279 244 147 5 110 352 220 436 1.03e-25 115
MS.gene052573.t1 AT1G09060 27.252 444 247 11 577 1013 404 778 5.52e-34 141
MS.gene052573.t1 AT1G09060 28.279 244 147 5 110 352 206 422 9.79e-26 115
MS.gene052573.t1 AT1G09060 27.252 444 247 11 577 1013 404 778 5.52e-34 141
MS.gene052573.t1 AT1G09060 28.279 244 147 5 110 352 206 422 9.79e-26 115

Find 228 sgRNAs with CRISPR-Local

Find 337 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATTTAGGTTGTGCCTTA+TGG 0.157329 4.3:+22601252 MS.gene052573:intron
CAAATCAAGCAGGTTGAATT+TGG 0.184918 4.3:+22602388 MS.gene052573:CDS
CGACAGTGAGCACCGTATTT+TGG 0.239480 4.3:+22602662 MS.gene052573:CDS
TGCAAATCAAATAATGAAAA+TGG 0.264039 4.3:-22602185 None:intergenic
GAGCTTTCAGCGGGACTTCT+AGG 0.264344 4.3:-22605661 None:intergenic
AATTGTAATGACAGCGAAAA+AGG 0.283370 4.3:+22602951 MS.gene052573:CDS
TTATGTCAAGGAAGAACTTC+TGG 0.298386 4.3:+22602588 MS.gene052573:CDS
AGCAACCCTATCAATATTCT+TGG 0.316108 4.3:-22601142 None:intergenic
GTGCAAGTCCGTTGACAAAC+TGG 0.326947 4.3:-22601973 None:intergenic
GATTCTGAACCCTCTCTTCA+TGG 0.331186 4.3:+22605613 MS.gene052573:CDS
GTTTCTTCAGCATGTGATAA+TGG 0.334835 4.3:-22605433 None:intergenic
CTGTTGCTAGCTCAGTTTCT+CGG 0.354130 4.3:-22602242 None:intergenic
GGTTGCTCTTGGAAAGTTGC+AGG 0.358083 4.3:+22601158 MS.gene052573:CDS
TTCTTCAAGCTTGGTCCATA+AGG 0.365467 4.3:-22601267 None:intergenic
ATCCCTTTCACTTCCCGTTC+AGG 0.368327 4.3:-22605409 None:intergenic
GCTGAAGAAACGGTACAAAA+AGG 0.370442 4.3:+22605445 MS.gene052573:CDS
AGAGTTACTTGAATCCTGTT+TGG 0.378807 4.3:+22603925 MS.gene052573:CDS
TCAACGGACTTGCACTTGTA+AGG 0.380103 4.3:+22601981 MS.gene052573:CDS
GATTATATCGATCAGTATTA+AGG 0.380811 4.3:-22603673 None:intergenic
TATCATTACCATTTGTCCTC+TGG 0.385531 4.3:-22602734 None:intergenic
TTAATGTATTCTACGAGCTT+TGG 0.390486 4.3:-22605754 None:intergenic
CGATATTCCGTTCTCCATCC+TGG 0.394854 4.3:-22605585 None:intergenic
TCCGGTCCAAGAATATTGAT+AGG 0.398987 4.3:+22601136 MS.gene052573:CDS
AACTGAGGTTTGATGTACTT+TGG 0.399437 4.3:-22603838 None:intergenic
GTTACAGTGAAAATATTTGC+TGG 0.406275 4.3:+22602410 MS.gene052573:CDS
ATCATTACAATTTGTCCTCT+CGG 0.408639 4.3:-22603252 None:intergenic
ATCATTACAATTTGTCCTCT+CGG 0.408639 4.3:-22603462 None:intergenic
ATCATTACCATTTGTCCTCT+GGG 0.408717 4.3:-22602733 None:intergenic
ATCATTACAATTTGTCATCT+CGG 0.408956 4.3:-22603042 None:intergenic
TACCGAGCTGTTACCTGAAC+GGG 0.409163 4.3:+22605396 MS.gene052573:CDS
GAAACTGCTCTTTGAATACT+TGG 0.409438 4.3:-22604300 None:intergenic
TTCAATGTTAGACGATTCCT+TGG 0.415591 4.3:+22605828 MS.gene052573:CDS
ATCATTACAATTTGTCCTCT+CGG 0.416975 4.3:-22603357 None:intergenic
ACATCTTGCATCTCCTCAAC+TGG 0.424879 4.3:+22605520 MS.gene052573:CDS
TGTGAGATTCATTATCTTCA+AGG 0.428955 4.3:+22600568 MS.gene052573:CDS
GGGACTTCTAGGTGACAAAT+TGG 0.429038 4.3:-22605650 None:intergenic
CCTTGTGGCAGCTCGAACAC+TGG 0.432844 4.3:-22601347 None:intergenic
CTGTAACGCCGCATTACTTC+CGG 0.434399 4.3:+22601118 MS.gene052573:CDS
GGATTCATGTATTCTTGAAC+TGG 0.442812 4.3:-22604355 None:intergenic
TCCTACGGAGCTTGGTGGAC+GGG 0.442880 4.3:+22603295 MS.gene052573:CDS
TTTCAGAAACACTGGGGAAA+AGG 0.444483 4.3:+22603788 MS.gene052573:CDS
TCATTACAATTTGTCCTCTC+AGG 0.447184 4.3:-22602939 None:intergenic
ATGTTCCCCTTCTTCAAGCT+TGG 0.448016 4.3:-22601276 None:intergenic
AAGTAGCAGTTAAATCAAAT+AGG 0.448870 4.3:-22602806 None:intergenic
ATGTACTTTGGAGCACATCT+TGG 0.448998 4.3:-22603826 None:intergenic
ATCACTAAAATTGGTCATCT+CGG 0.449833 4.3:-22603147 None:intergenic
AATATTGATAGGGTTGCTCT+TGG 0.454724 4.3:+22601147 MS.gene052573:CDS
CAAAGCATCATGCCGTCCTA+TGG 0.454944 4.3:+22602761 MS.gene052573:CDS
TCATTACAATTTGTCATCTC+GGG 0.455911 4.3:-22603041 None:intergenic
AGCACATCTTGGACCACTAT+AGG 0.456305 4.3:-22603815 None:intergenic
ATCATTACAACTTGTACGCT+CGG 0.457114 4.3:-22602838 None:intergenic
TGCCCTCCTACGGAGCTTGA+TGG 0.458504 4.3:+22603080 MS.gene052573:CDS
GATTCAAAGAATCACTTCTC+TGG 0.459014 4.3:-22601320 None:intergenic
GCACAAAGCTCTGTGTCAAA+TGG 0.462122 4.3:+22605363 MS.gene052573:CDS
CCTATGGAGCTTGGTGGATG+TGG 0.464121 4.3:+22602882 MS.gene052573:CDS
AAGTAATGGCAGTGAAAGTA+AGG 0.468390 4.3:+22602020 MS.gene052573:CDS
AAAAGTATCATGCCCTCCTA+TGG 0.468733 4.3:+22602866 MS.gene052573:CDS
GAGCTTGATGGACGAGATAC+AGG 0.469107 4.3:+22603092 MS.gene052573:CDS
CTATGACTTTCCTGAAACTT+CGG 0.470452 4.3:+22603613 MS.gene052573:CDS
GAGCTTGGTGGATGTGGTAC+AGG 0.470607 4.3:+22602888 MS.gene052573:CDS
AACCTCACACCAATCCAAAC+AGG 0.473499 4.3:-22603939 None:intergenic
AAAGTACATCAAACCTCAGT+TGG 0.475272 4.3:+22603840 MS.gene052573:CDS
TCATGTTTCGGACTCCCGTC+TGG 0.475731 4.3:-22604412 None:intergenic
TCATTACAATTTGTCCTCTC+GGG 0.476548 4.3:-22603251 None:intergenic
TCATTACAATTTGTCCTCTC+GGG 0.476548 4.3:-22603356 None:intergenic
TCATTACAATTTGTCCTCTC+GGG 0.476548 4.3:-22603461 None:intergenic
TCACTGCAAAACACCTGTCT+TGG 0.476800 4.3:+22602506 MS.gene052573:CDS
TACTTGAATCCTGTTTGGAT+TGG 0.477458 4.3:+22603930 MS.gene052573:CDS
GAGCTTGGTGGACGAGATAC+AGG 0.478036 4.3:+22602990 MS.gene052573:CDS
TATGGCCCAATGTCATGTTT+CGG 0.478824 4.3:-22604424 None:intergenic
GAGCTTGGTGGATGTGGTAC+AGG 0.482145 4.3:+22603512 MS.gene052573:CDS
CTTCCACACCGGAGTTCGTC+CGG 0.482168 4.3:-22600490 None:intergenic
CTCCTACGGAGCTTGGTGGA+CGG 0.487081 4.3:+22603294 MS.gene052573:CDS
ACATTGCCCCAGAGGACAAA+TGG 0.487539 4.3:+22602726 MS.gene052573:CDS
CTCTGAAGCTTCAAAGACTC+TGG 0.487745 4.3:-22600619 None:intergenic
GAATACATGAATCCTGTGTC+TGG 0.490993 4.3:+22604364 MS.gene052573:CDS
TCACTTATTCGCTTTAGTAA+TGG 0.492198 4.3:-22602216 None:intergenic
AAGTAAGGACAGTGAAAGTA+AGG 0.492428 4.3:+22602035 MS.gene052573:CDS
TAGCTGCAAATTTGCCAGAC+GGG 0.492947 4.3:+22604398 MS.gene052573:CDS
TGAAGAAGGGGAACATTAAG+AGG 0.493883 4.3:+22601283 MS.gene052573:CDS
ATTCCTTCTTTCCCCATACT+CGG 0.499857 4.3:-22605472 None:intergenic
CCCTATCAATATTCTTGGAC+CGG 0.500213 4.3:-22601137 None:intergenic
ATTCTGAACCCTCTCTTCAT+GGG 0.500401 4.3:+22605614 MS.gene052573:CDS
CCTACGGAGCTTGGTGGATG+TGG 0.500603 4.3:+22603506 MS.gene052573:CDS
TTATGGACCAAGCTTGAAGA+AGG 0.505193 4.3:+22601269 MS.gene052573:CDS
TTGAGCACTTTCAGAAACAC+TGG 0.506615 4.3:+22603780 MS.gene052573:CDS
TGTCCTTCTGATCCAAAATA+CGG 0.506979 4.3:-22602674 None:intergenic
TCACTAAAATTGGTCATCTC+GGG 0.512183 4.3:-22603146 None:intergenic
TTCTGATATTCAAATCAAGC+AGG 0.514306 4.3:+22602378 MS.gene052573:CDS
TCATGCCCTCCTATGGAGCT+TGG 0.515388 4.3:+22602873 MS.gene052573:CDS
CCACATCCACCAAGCTCCAT+AGG 0.515620 4.3:-22602882 None:intergenic
GGAGTCCGAAACATGACATT+GGG 0.516011 4.3:+22604419 MS.gene052573:CDS
TCATGCCCTCCTACGGAGCT+TGG 0.516173 4.3:+22602975 MS.gene052573:CDS
TCATGCCCTCCTACGGAGCT+TGG 0.516173 4.3:+22603287 MS.gene052573:CDS
TCATGCCCTCCTACGGAGCT+TGG 0.516173 4.3:+22603392 MS.gene052573:CDS
TCATGCCCTCCTACGGAGCT+TGG 0.516173 4.3:+22603497 MS.gene052573:CDS
GGCAGGTGGAAATAAACATT+AGG 0.516503 4.3:+22604194 MS.gene052573:intron
TTGCACTTGTAAGGTCTGCT+TGG 0.519166 4.3:+22601990 MS.gene052573:CDS
GCATCGTCAATATAGAGAAA+AGG 0.520257 4.3:+22600594 MS.gene052573:CDS
TGCCCTCCTATGGAGCTTGG+TGG 0.523556 4.3:+22602876 MS.gene052573:CDS
CCATATGTCTATATTTCGTA+TGG 0.524574 4.3:+22604442 MS.gene052573:CDS
AGCTTCTACCGGACGAACTC+CGG 0.528374 4.3:+22600482 MS.gene052573:CDS
CACTAGAAAAGAAGTTAAGA+AGG 0.530890 4.3:+22601945 MS.gene052573:CDS
TCATGCCCTCCTACGGAGCT+TGG 0.533099 4.3:+22603182 MS.gene052573:CDS
GCATGAGATGCTGAAACTGA+AGG 0.533826 4.3:+22604264 MS.gene052573:CDS
TGCCCTCCTACGGAGCTTGG+TGG 0.534853 4.3:+22603500 MS.gene052573:CDS
GCTTTGATTGTATAAGAGAT+CGG 0.536835 4.3:+22601379 MS.gene052573:CDS
AGGAACAGTCCCATGAAGAG+AGG 0.537205 4.3:-22605623 None:intergenic
ATTATCACATGCTGAAGAAA+CGG 0.538073 4.3:+22605435 MS.gene052573:CDS
CCATACGAAATATAGACATA+TGG 0.539244 4.3:-22604442 None:intergenic
GGAAGCAATGGCGGTGCAAG+AGG 0.539340 4.3:+22600521 MS.gene052573:CDS
TGCCCTCCTACGGAGCTTGG+TGG 0.541670 4.3:+22602978 MS.gene052573:CDS
TGCCCTCCTACGGAGCTTGG+TGG 0.541670 4.3:+22603290 MS.gene052573:CDS
TGCCCTCCTACGGAGCTTGG+TGG 0.541670 4.3:+22603395 MS.gene052573:CDS
CGTCCACCAAGCTCCGTAGG+AGG 0.545713 4.3:-22603293 None:intergenic
CATCCACCAAGCTCCGTAGG+AGG 0.545730 4.3:-22603503 None:intergenic
CTCGACTTTACTCAGAGAGA+TGG 0.548603 4.3:+22603562 MS.gene052573:CDS
TTACCTGAACGGGAAGTGAA+AGG 0.550425 4.3:+22605406 MS.gene052573:CDS
GTGAGATTCATTATCTTCAA+GGG 0.550820 4.3:+22600569 MS.gene052573:CDS
CCGGTCCAAGAATATTGATA+GGG 0.551000 4.3:+22601137 MS.gene052573:CDS
GATATTCCGTTCTCCATCCT+GGG 0.552781 4.3:-22605584 None:intergenic
CAAGTTGTTCTGTAGAGAGA+GGG 0.552992 4.3:-22605315 None:intergenic
GGGAAAAGGCCAGCCTATAG+TGG 0.553086 4.3:+22603802 MS.gene052573:CDS
CATATACAACAATATTTCCC+AGG 0.553401 4.3:+22605567 MS.gene052573:CDS
TGCAAGTCCGTTGACAAACT+GGG 0.554194 4.3:-22601972 None:intergenic
TTGTAGTAGTTAAATCAAGC+AGG 0.556864 4.3:-22602911 None:intergenic
TACCTGAACGGGAAGTGAAA+GGG 0.557390 4.3:+22605407 MS.gene052573:CDS
TGAGCACTTTCAGAAACACT+GGG 0.558873 4.3:+22603781 MS.gene052573:CDS
TCTCACAACATCTTAAGCAT+AGG 0.559014 4.3:-22602563 None:intergenic
TCACATCCACCAACCTCCAT+AGG 0.559920 4.3:-22602777 None:intergenic
GATCAGAAGGACATTTGTTG+TGG 0.560803 4.3:+22602684 MS.gene052573:CDS
GAGCTTGGTGAATCTAGTAC+AGG 0.562985 4.3:+22603197 MS.gene052573:CDS
AAGTAGCAGTTAAATCAAGC+AGG 0.563193 4.3:-22603325 None:intergenic
GGCGACCGAGGAGCTTCTAC+CGG 0.563905 4.3:+22600471 MS.gene052573:CDS
TTACCGAGTATGGGGAAAGA+AGG 0.564549 4.3:+22605469 MS.gene052573:CDS
GTCTTCGAAAGACATCCCAC+TGG 0.565818 4.3:-22605723 None:intergenic
AAAAGTATCATGCCCTCCTA+CGG 0.566246 4.3:+22603070 MS.gene052573:CDS
TTCGTCCGGTAGAAGCTCCT+CGG 0.566731 4.3:-22600476 None:intergenic
GTCCACCAAGCTCCGTAGGA+GGG 0.566976 4.3:-22603292 None:intergenic
GATTCACCAAGCTCCGTAGG+AGG 0.568187 4.3:-22603188 None:intergenic
TACAACAATATTTCCCAGGA+TGG 0.572240 4.3:+22605571 MS.gene052573:CDS
GAAGAACCGACGGGAAGCAA+TGG 0.572927 4.3:+22600509 MS.gene052573:CDS
AAAAGTATCATGCCCTCCTA+CGG 0.573066 4.3:+22603175 MS.gene052573:CDS
AAAAGTATCATGCCCTCCTA+CGG 0.573066 4.3:+22603385 MS.gene052573:CDS
TACTCATGACTCTCACAAGA+AGG 0.573176 4.3:+22605801 MS.gene052573:CDS
CATCCACCAAGCTCCATAGG+AGG 0.573573 4.3:-22602879 None:intergenic
CGTCCACCAAGCTCCGTAGG+AGG 0.574916 4.3:-22602981 None:intergenic
CGTCCATCAAGCTCCGTAGG+AGG 0.574916 4.3:-22603083 None:intergenic
CGTCCACCAAGCTCCGTAGG+AGG 0.574916 4.3:-22603398 None:intergenic
CTCCGGTGTGGAAGAACCGA+CGG 0.574960 4.3:+22600499 MS.gene052573:CDS
GTCCATCAAGCTCCGTAGGA+GGG 0.576712 4.3:-22603082 None:intergenic
AAAAGGATCATGCCCTCCTA+CGG 0.576719 4.3:+22602968 MS.gene052573:CDS
TGCCGTCCTATGGAGGTTGG+TGG 0.576769 4.3:+22602771 MS.gene052573:CDS
CTAGATTCACCAAGCTCCGT+AGG 0.578422 4.3:-22603191 None:intergenic
CTACTACAACATTGCCTGAG+AGG 0.579229 4.3:+22602925 MS.gene052573:CDS
GCAAGTTGTTCTGTAGAGAG+AGG 0.581333 4.3:-22605316 None:intergenic
TGAGCATTCAGGTGCCCAGT+GGG 0.583742 4.3:+22605708 MS.gene052573:CDS
AAAATCTTCATCGGCGACCG+AGG 0.584811 4.3:+22600459 MS.gene052573:CDS
TCATGCCGTCCTATGGAGGT+TGG 0.585483 4.3:+22602768 MS.gene052573:CDS
TAATATTATGACACATTCTG+CGG 0.586792 4.3:+22605288 MS.gene052573:CDS
CTTCTATGAAGATCCAAGAC+AGG 0.588015 4.3:-22602519 None:intergenic
TAACAGTTAGAGCTTTCAGC+GGG 0.588178 4.3:-22605670 None:intergenic
CATCTTGGACCACTATAGGC+TGG 0.588424 4.3:-22603811 None:intergenic
ATGGACCAAGCTTGAAGAAG+GGG 0.588816 4.3:+22601271 MS.gene052573:CDS
AAAAGTATCATGCCCTCCTA+CGG 0.589079 4.3:+22603280 MS.gene052573:CDS
AAAAGTATCATGCCCTCCTA+CGG 0.589079 4.3:+22603490 MS.gene052573:CDS
TTGCAGAAAGCAGCTGAGAG+AGG 0.589642 4.3:+22603698 MS.gene052573:CDS
GTCCACCAAGCTCCGTAGGA+GGG 0.589803 4.3:-22602980 None:intergenic
GTCCACCAAGCTCCGTAGGA+GGG 0.589803 4.3:-22603397 None:intergenic
TTATTCGCTTTAGTAATGGA+AGG 0.590215 4.3:-22602212 None:intergenic
TCATTACAACTTGTACGCTC+GGG 0.593914 4.3:-22602837 None:intergenic
CCACATCCACCAAGCTCCGT+AGG 0.593986 4.3:-22603506 None:intergenic
GGGAGTCCGAAACATGACAT+TGG 0.594425 4.3:+22604418 MS.gene052573:CDS
AATGGCGAGAAAATCTTCAT+CGG 0.597998 4.3:+22600450 None:intergenic
TCCCGTCGGTTCTTCCACAC+CGG 0.600501 4.3:-22600501 None:intergenic
CTAGGTGACAAATTGGTGGT+AGG 0.600866 4.3:-22605643 None:intergenic
TCTCGTCCACCAAGCTCCGT+AGG 0.600890 4.3:-22602984 None:intergenic
TCTCGTCCACCAAGCTCCGT+AGG 0.600890 4.3:-22603401 None:intergenic
TTCTTGGACCGGAAGTAATG+CGG 0.602220 4.3:-22601126 None:intergenic
ATCCTGTTTGGATTGGTGTG+AGG 0.602391 4.3:+22603937 MS.gene052573:CDS
ATTCACCAAGCTCCGTAGGA+GGG 0.603465 4.3:-22603187 None:intergenic
CTACCGAGCTGTTACCTGAA+CGG 0.605124 4.3:+22605395 MS.gene052573:CDS
TTAGCTGCAAATTTGCCAGA+CGG 0.605746 4.3:+22604397 MS.gene052573:CDS
CCACTGATGTCCAAAACTGT+AGG 0.606253 4.3:-22603749 None:intergenic
AGATGCTGAAACTGAAGGGA+TGG 0.606461 4.3:+22604269 MS.gene052573:CDS
TCTCGTCCATCAAGCTCCGT+AGG 0.606493 4.3:-22603086 None:intergenic
GCACCGCCATTGCTTCCCGT+CGG 0.609777 4.3:-22600515 None:intergenic
AGGCATGCCCAGTTTGTCAA+CGG 0.610240 4.3:+22601965 MS.gene052573:CDS
AGCATCATGCCGTCCTATGG+AGG 0.610243 4.3:+22602764 MS.gene052573:CDS
AAACTGCTCTTTGAATACTT+GGG 0.610781 4.3:-22604299 None:intergenic
ATCCACCAAGCTCCGTAGGA+GGG 0.611716 4.3:-22603502 None:intergenic
TATGGACCAAGCTTGAAGAA+GGG 0.612850 4.3:+22601270 MS.gene052573:CDS
CATCTCTCTGAGTAAAGTCG+AGG 0.614260 4.3:-22603561 None:intergenic
GAGGTTGGTGGATGTGACAC+AGG 0.614766 4.3:+22602783 MS.gene052573:CDS
ATCTCTCTGAGTAAAGTCGA+GGG 0.615126 4.3:-22603560 None:intergenic
ATCCACCAAGCTCCATAGGA+GGG 0.617732 4.3:-22602878 None:intergenic
GAACCGACGGGAAGCAATGG+CGG 0.620984 4.3:+22600512 MS.gene052573:CDS
AAATGCATAATAAATCAAGA+AGG 0.623493 4.3:-22603535 None:intergenic
CCAGTGTTCGAGCTGCCACA+AGG 0.629820 4.3:+22601347 MS.gene052573:CDS
ACTTCTAGGTGACAAATTGG+TGG 0.632206 4.3:-22605647 None:intergenic
ATCCACCAACCTCCATAGGA+CGG 0.633695 4.3:-22602773 None:intergenic
TCCCGTCCACCAAGCTCCGT+AGG 0.634155 4.3:-22603296 None:intergenic
GGAACAGTCCCATGAAGAGA+GGG 0.635259 4.3:-22605622 None:intergenic
TTCCCGTTCAGGTAACAGCT+CGG 0.635956 4.3:-22605398 None:intergenic
TGAACAGTGGATTCCAACTG+AGG 0.636045 4.3:-22603853 None:intergenic
TGTTGTGAGAAATTATGTCA+AGG 0.636724 4.3:+22602576 MS.gene052573:CDS
CATGAGATGCTGAAACTGAA+GGG 0.639571 4.3:+22604265 MS.gene052573:CDS
CAACTTCAACATTGCCCCAG+AGG 0.647616 4.3:+22602718 MS.gene052573:CDS
CTACTTCAACATTGCCCGAG+AGG 0.649882 4.3:+22603237 MS.gene052573:CDS
CTACTTCAACATTGCCCGAG+AGG 0.649882 4.3:+22603342 MS.gene052573:CDS
GTCGTCCTCAGAGAAACACT+TGG 0.650712 4.3:+22604242 MS.gene052573:CDS
ATATTTCCCAGGATGGAGAA+CGG 0.651305 4.3:+22605578 MS.gene052573:CDS
CTACTTCAACGTCGCCCGAG+AGG 0.654189 4.3:+22603447 MS.gene052573:CDS
AGGACGACATTTGAGAGACC+CGG 0.654680 4.3:-22604227 None:intergenic
TCCGGTGTGGAAGAACCGAC+GGG 0.656307 4.3:+22600500 MS.gene052573:CDS
TCTTCGAAAGACATCCCACT+GGG 0.657045 4.3:-22605722 None:intergenic
CTGAGCATTCAGGTGCCCAG+TGG 0.657262 4.3:+22605707 MS.gene052573:CDS
TCATTACCATTTGTCCTCTG+GGG 0.668041 4.3:-22602732 None:intergenic
ATATCGATCAGTATTAAGGT+CGG 0.668458 4.3:-22603669 None:intergenic
GCGGTGCAAGAGGAGAGTGA+TGG 0.671559 4.3:+22600531 MS.gene052573:CDS
ATAACAGTTAGAGCTTTCAG+CGG 0.672646 4.3:-22605671 None:intergenic
CTACCGGACGAACTCCGGTG+TGG 0.689380 4.3:+22600487 MS.gene052573:CDS
TCATGCCAAGTGTTTCTCTG+AGG 0.692066 4.3:-22604247 None:intergenic
CTGTTGTGACTCATATGATG+TGG 0.696455 4.3:+22604501 MS.gene052573:CDS
AAATTCAGAAGACCAGACAC+AGG 0.697394 4.3:-22604376 None:intergenic
TGCTTGGCAAGTGAAAGTAA+TGG 0.699374 4.3:+22602006 MS.gene052573:CDS
TAAGTACAGAACATGAACAG+TGG 0.701247 4.3:-22603866 None:intergenic
GAGCACTTTCAGAAACACTG+GGG 0.743918 4.3:+22603782 MS.gene052573:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTAATATATAAAAATGAATT+TGG + chr4.3:22604951-22604970 MS.gene052573:intron 10.0%
!!! CAAATTCATTTTTATATATT+AGG - chr4.3:22604953-22604972 None:intergenic 10.0%
!!! TTATAATAAGGATTTAAAAT+TGG + chr4.3:22605128-22605147 MS.gene052573:intron 10.0%
!!! TCATTTTTATATATTAGGAT+TGG - chr4.3:22604948-22604967 None:intergenic 15.0%
!! AAAATAAAGTCTTAAATGCA+GGG - chr4.3:22604585-22604604 None:intergenic 20.0%
!! AAAGTGATTTCAACTATAAT+GGG + chr4.3:22604628-22604647 MS.gene052573:intron 20.0%
!! AAATCACTTTAACATGATAT+AGG - chr4.3:22604618-22604637 None:intergenic 20.0%
!! AAATGCATAATAAATCAAGA+AGG - chr4.3:22603538-22603557 None:intergenic 20.0%
!! CTATTAAAAAAATGTCAATC+TGG + chr4.3:22602453-22602472 MS.gene052573:intron 20.0%
!! TAAAGTGATTTCAACTATAA+TGG + chr4.3:22604627-22604646 MS.gene052573:intron 20.0%
!! TGCAAATCAAATAATGAAAA+TGG - chr4.3:22602188-22602207 None:intergenic 20.0%
!! TTTCTTATTCTTCTTCTTAT+TGG - chr4.3:22600920-22600939 None:intergenic 20.0%
!!! CTGAAATAACTCTTTTATTT+AGG + chr4.3:22601239-22601258 MS.gene052573:intron 20.0%
!!! TTAAAAAGCACAATTTCATA+TGG + chr4.3:22601615-22601634 MS.gene052573:intron 20.0%
!!! TTGTTAAGTGTGTTTTTTAT+TGG + chr4.3:22604173-22604192 MS.gene052573:intron 20.0%
!!! TTTGTTCTAGCTTTATAATA+AGG + chr4.3:22605116-22605135 MS.gene052573:intron 20.0%
! AAGTAGCAGTTAAATCAAAT+AGG - chr4.3:22602809-22602828 None:intergenic 25.0%
! AATGTGTCATAATATTAACC+TGG - chr4.3:22605285-22605304 None:intergenic 25.0%
! ACAATTCCAAAAAATTTCCA+AGG - chr4.3:22605848-22605867 None:intergenic 25.0%
! ACAATTGGATCTTATAAGAA+TGG + chr4.3:22600855-22600874 MS.gene052573:intron 25.0%
! AGATGAACAGTAATATAACA+AGG - chr4.3:22604534-22604553 None:intergenic 25.0%
! ATCATTACAATTTGTCATCT+CGG - chr4.3:22603045-22603064 None:intergenic 25.0%
! CTCTCTTAAGAAAATCAAAA+GGG - chr4.3:22601665-22601684 None:intergenic 25.0%
! GAAAATAAAGTCTTAAATGC+AGG - chr4.3:22604586-22604605 None:intergenic 25.0%
! GATGAAGAAAAAAGTGATTA+AGG + chr4.3:22600945-22600964 MS.gene052573:intron 25.0%
! GATTATATCGATCAGTATTA+AGG - chr4.3:22603676-22603695 None:intergenic 25.0%
! TAAAAACATAGTTAGAGGTT+AGG + chr4.3:22601638-22601657 MS.gene052573:intron 25.0%
! TAATATTATGACACATTCTG+CGG + chr4.3:22605288-22605307 MS.gene052573:CDS 25.0%
! TATGGTAAAAACATAGTTAG+AGG + chr4.3:22601633-22601652 MS.gene052573:intron 25.0%
! TCTCTCTTAAGAAAATCAAA+AGG - chr4.3:22601666-22601685 None:intergenic 25.0%
! TCTCTTAAGAAAATCAAAAG+GGG - chr4.3:22601664-22601683 None:intergenic 25.0%
!! ATGTGCTATGTTATTCTTTT+GGG + chr4.3:22601572-22601591 MS.gene052573:intron 25.0%
!! ATTTCCTTTGATATTTGCTA+CGG + chr4.3:22604658-22604677 MS.gene052573:intron 25.0%
!! CAAAACTTTTTGACACAAAT+AGG + chr4.3:22601914-22601933 MS.gene052573:intron 25.0%
!! TATGTGCTATGTTATTCTTT+TGG + chr4.3:22601571-22601590 MS.gene052573:intron 25.0%
!! TTTTTCGCTATCACTAAAAT+TGG - chr4.3:22603159-22603178 None:intergenic 25.0%
!!! AGATTGTTTTGTGCAATATA+AGG + chr4.3:22604781-22604800 MS.gene052573:intron 25.0%
!!! ATGATAGTGTTAACCTTTTT+TGG - chr4.3:22604033-22604052 None:intergenic 25.0%
!!! GAATTGCATGATTTTAAAGA+AGG + chr4.3:22600976-22600995 MS.gene052573:intron 25.0%
!!! TGATAGTGTTAACCTTTTTT+GGG - chr4.3:22604032-22604051 None:intergenic 25.0%
!!! TTAGTTGTTCCTTTTGATTA+TGG + chr4.3:22604117-22604136 MS.gene052573:intron 25.0%
!!! TTGCTGATTTTGATTCTATA+GGG + chr4.3:22601545-22601564 MS.gene052573:intron 25.0%
AAAAGTGATTAAGGAAGAAG+TGG + chr4.3:22600954-22600973 MS.gene052573:intron 30.0%
AAACTGCTCTTTGAATACTT+GGG - chr4.3:22604302-22604321 None:intergenic 30.0%
AAAGAAGTTTGACGTATGAT+TGG - chr4.3:22603975-22603994 None:intergenic 30.0%
AATTCTCAATTCAAGAGCAA+CGG - chr4.3:22601876-22601895 None:intergenic 30.0%
AATTGTAATGACAGCGAAAA+AGG + chr4.3:22602951-22602970 MS.gene052573:CDS 30.0%
ACTTCTATTTGACCCAAAAA+AGG + chr4.3:22604017-22604036 MS.gene052573:intron 30.0%
AGAATTACCAAATGGAGTAA+TGG + chr4.3:22601011-22601030 MS.gene052573:intron 30.0%
ATATCGATCAGTATTAAGGT+CGG - chr4.3:22603672-22603691 None:intergenic 30.0%
ATCACTAAAATTGGTCATCT+CGG - chr4.3:22603150-22603169 None:intergenic 30.0%
ATCATTACAATTTGTCCTCT+CGG - chr4.3:22603255-22603274 None:intergenic 30.0%
ATTACTTCAGAAAAATGAGC+TGG - chr4.3:22604325-22604344 None:intergenic 30.0%
ATTATCACATGCTGAAGAAA+CGG + chr4.3:22605435-22605454 MS.gene052573:CDS 30.0%
CACTAGAAAAGAAGTTAAGA+AGG + chr4.3:22601945-22601964 MS.gene052573:CDS 30.0%
CAGAACAACTTGCAAAAATA+AGG + chr4.3:22605326-22605345 MS.gene052573:CDS 30.0%
CATATACAACAATATTTCCC+AGG + chr4.3:22605567-22605586 MS.gene052573:CDS 30.0%
CCATACGAAATATAGACATA+TGG - chr4.3:22604445-22604464 None:intergenic 30.0%
CCATATGTCTATATTTCGTA+TGG + chr4.3:22604442-22604461 MS.gene052573:CDS 30.0%
GAATCAGAAATAGAACCAAT+AGG - chr4.3:22604996-22605015 None:intergenic 30.0%
GCAACAGAAGCAAAAATTAA+AGG + chr4.3:22602258-22602277 MS.gene052573:CDS 30.0%
GCTTTGATTGTATAAGAGAT+CGG + chr4.3:22601379-22601398 MS.gene052573:CDS 30.0%
GGTAGAAAAAGAGTTCAAAA+TGG + chr4.3:22600717-22600736 MS.gene052573:intron 30.0%
GTGAGATTCATTATCTTCAA+GGG + chr4.3:22600569-22600588 MS.gene052573:CDS 30.0%
GTTACAGTGAAAATATTTGC+TGG + chr4.3:22602410-22602429 MS.gene052573:CDS 30.0%
TCACTTATTCGCTTTAGTAA+TGG - chr4.3:22602219-22602238 None:intergenic 30.0%
TCATTACAATTTGTCATCTC+GGG - chr4.3:22603044-22603063 None:intergenic 30.0%
TGTGAGATTCATTATCTTCA+AGG + chr4.3:22600568-22600587 MS.gene052573:CDS 30.0%
TGTTGTGAGAAATTATGTCA+AGG + chr4.3:22602576-22602595 MS.gene052573:CDS 30.0%
TTAATGTATTCTACGAGCTT+TGG - chr4.3:22605757-22605776 None:intergenic 30.0%
TTCTGATATTCAAATCAAGC+AGG + chr4.3:22602378-22602397 MS.gene052573:CDS 30.0%
TTGTAGTAGTTAAATCAAGC+AGG - chr4.3:22602914-22602933 None:intergenic 30.0%
! AACATTAGGCAGTATTTTAC+CGG + chr4.3:22604208-22604227 MS.gene052573:CDS 30.0%
! ATTTTCTTAAGAGAGATGCA+TGG + chr4.3:22601670-22601689 MS.gene052573:intron 30.0%
! CACACTTAACAATAGCATTT+TGG - chr4.3:22604165-22604184 None:intergenic 30.0%
! TGTGCTATGTTATTCTTTTG+GGG + chr4.3:22601573-22601592 MS.gene052573:intron 30.0%
! TTATTCGCTTTAGTAATGGA+AGG - chr4.3:22602215-22602234 None:intergenic 30.0%
!! ATTTTAAAGAAGGTGAGTTG+AGG + chr4.3:22600986-22601005 MS.gene052573:intron 30.0%
!! TCTACTTTTGCTAGACAAAT+AGG - chr4.3:22602151-22602170 None:intergenic 30.0%
!! TGCTGAATTTGTTACTTTGT+TGG + chr4.3:22601478-22601497 MS.gene052573:intron 30.0%
!! TTTATTTAGGTTGTGCCTTA+TGG + chr4.3:22601252-22601271 MS.gene052573:intron 30.0%
!! TTTTGATTATGGCCATACTA+GGG + chr4.3:22604128-22604147 MS.gene052573:intron 30.0%
!!! AAGGAAATGACTAGGTTTTT+TGG - chr4.3:22605074-22605093 None:intergenic 30.0%
!!! ACGATTCCTTGGAAATTTTT+TGG + chr4.3:22605839-22605858 MS.gene052573:CDS 30.0%
!!! CTTGCTGATTTTGATTCTAT+AGG + chr4.3:22601544-22601563 MS.gene052573:intron 30.0%
!!! TAAGTGTGTTTTTTATTGGC+AGG + chr4.3:22604177-22604196 MS.gene052573:intron 30.0%
AAAAAGGTTTACCGAGTATG+GGG + chr4.3:22605461-22605480 MS.gene052573:CDS 35.0%
AAAAAGTTCACTGAGCATTC+AGG + chr4.3:22605697-22605716 MS.gene052573:CDS 35.0%
AAAGTACATCAAACCTCAGT+TGG + chr4.3:22603840-22603859 MS.gene052573:CDS 35.0%
AACTGAGGTTTGATGTACTT+TGG - chr4.3:22603841-22603860 None:intergenic 35.0%
AAGATAATGATTCGCTAGCA+AGG - chr4.3:22601761-22601780 None:intergenic 35.0%
AAGTAAGGACAGTGAAAGTA+AGG + chr4.3:22602035-22602054 MS.gene052573:CDS 35.0%
AAGTAATGGCAGTGAAAGTA+AGG + chr4.3:22602020-22602039 MS.gene052573:CDS 35.0%
AAGTAGCAGTTAAATCAAGC+AGG - chr4.3:22603118-22603137 None:intergenic 35.0%
AATATTGATAGGGTTGCTCT+TGG + chr4.3:22601147-22601166 MS.gene052573:CDS 35.0%
AATGATCACGAATTGCACAA+AGG - chr4.3:22605093-22605112 None:intergenic 35.0%
ACAAAAAGGTTTACCGAGTA+TGG + chr4.3:22605459-22605478 MS.gene052573:CDS 35.0%
ACAATCGTAAGTGTATGAGA+CGG - chr4.3:22604886-22604905 None:intergenic 35.0%
ACAATGTGGAAGAAACAGTT+AGG + chr4.3:22600695-22600714 MS.gene052573:intron 35.0%
ACTCATTGTGATGTGAAAGT+TGG + chr4.3:22601078-22601097 MS.gene052573:intron 35.0%
AGAGTTACTTGAATCCTGTT+TGG + chr4.3:22603925-22603944 MS.gene052573:CDS 35.0%
AGATGTCATGTTGTGTAACA+GGG + chr4.3:22602347-22602366 MS.gene052573:intron 35.0%
AGCAACCCTATCAATATTCT+TGG - chr4.3:22601145-22601164 None:intergenic 35.0%
ATAACAGTTAGAGCTTTCAG+CGG - chr4.3:22605674-22605693 None:intergenic 35.0%
ATCATTACAACTTGTACGCT+CGG - chr4.3:22602841-22602860 None:intergenic 35.0%
ATCATTACCATTTGTCCTCT+GGG - chr4.3:22602736-22602755 None:intergenic 35.0%
ATTGCACAAAGGAAATGACT+AGG - chr4.3:22605082-22605101 None:intergenic 35.0%
CAAAAAGGTTTACCGAGTAT+GGG + chr4.3:22605460-22605479 MS.gene052573:CDS 35.0%
CAAATCATCATTGATCCATC+TGG - chr4.3:22601817-22601836 None:intergenic 35.0%
CAAGAACAAGAAACTGTTGT+TGG + chr4.3:22600667-22600686 MS.gene052573:intron 35.0%
CAATGTGGAAGAAACAGTTA+GGG + chr4.3:22600696-22600715 MS.gene052573:intron 35.0%
CCACATTAAGTTATCACGAT+AGG - chr4.3:22604709-22604728 None:intergenic 35.0%
CCGGGTGATTATAAAAATGT+GGG + chr4.3:22601054-22601073 MS.gene052573:intron 35.0%
CCTATCGTGATAACTTAATG+TGG + chr4.3:22604706-22604725 MS.gene052573:intron 35.0%
CGGGTGATTATAAAAATGTG+GGG + chr4.3:22601055-22601074 MS.gene052573:intron 35.0%
CTAGTATGGCCATAATCAAA+AGG - chr4.3:22604129-22604148 None:intergenic 35.0%
CTATGACTTTCCTGAAACTT+CGG + chr4.3:22603613-22603632 MS.gene052573:CDS 35.0%
GAAACTGCTCTTTGAATACT+TGG - chr4.3:22604303-22604322 None:intergenic 35.0%
GAAGCAATGTGATACACAAT+TGG + chr4.3:22600840-22600859 MS.gene052573:intron 35.0%
GAATTCTCATCATGCATTGT+AGG + chr4.3:22601500-22601519 MS.gene052573:intron 35.0%
GATATCTCCATTACTCCATT+TGG - chr4.3:22601021-22601040 None:intergenic 35.0%
GATTCAAAGAATCACTTCTC+TGG - chr4.3:22601323-22601342 None:intergenic 35.0%
GCAGAAATAGTAATACCAGA+TGG + chr4.3:22601799-22601818 MS.gene052573:intron 35.0%
GCATCGTCAATATAGAGAAA+AGG + chr4.3:22600594-22600613 MS.gene052573:CDS 35.0%
GGATCTTATAAGAATGGTCT+TGG + chr4.3:22600861-22600880 MS.gene052573:intron 35.0%
GGATTCATGTATTCTTGAAC+TGG - chr4.3:22604358-22604377 None:intergenic 35.0%
GGTTGTTAACTAATGTTCTC+TGG + chr4.3:22602474-22602493 MS.gene052573:intron 35.0%
GTTTCTTCAGCATGTGATAA+TGG - chr4.3:22605436-22605455 None:intergenic 35.0%
TAAGTACAGAACATGAACAG+TGG - chr4.3:22603869-22603888 None:intergenic 35.0%
TACAACAATATTTCCCAGGA+TGG + chr4.3:22605571-22605590 MS.gene052573:CDS 35.0%
TACTTGAATCCTGTTTGGAT+TGG + chr4.3:22603930-22603949 MS.gene052573:CDS 35.0%
TAGATGTCATGTTGTGTAAC+AGG + chr4.3:22602346-22602365 MS.gene052573:intron 35.0%
TATCATTACCATTTGTCCTC+TGG - chr4.3:22602737-22602756 None:intergenic 35.0%
TCACTAAAATTGGTCATCTC+GGG - chr4.3:22603149-22603168 None:intergenic 35.0%
TCATTACAATTTGTCCTCTC+AGG - chr4.3:22602942-22602961 None:intergenic 35.0%
TCATTACAATTTGTCCTCTC+GGG - chr4.3:22602942-22602961 None:intergenic 35.0%
TCTCACAACATCTTAAGCAT+AGG - chr4.3:22602566-22602585 None:intergenic 35.0%
TGTCCTTCTGATCCAAAATA+CGG - chr4.3:22602677-22602696 None:intergenic 35.0%
TTATGTCAAGGAAGAACTTC+TGG + chr4.3:22602588-22602607 MS.gene052573:CDS 35.0%
TTCAATGTTAGACGATTCCT+TGG + chr4.3:22605828-22605847 MS.gene052573:CDS 35.0%
TTGAGGAGAGAATTACCAAA+TGG + chr4.3:22601003-22601022 MS.gene052573:intron 35.0%
! AAGAAGGAATCGAGTTTTTC+AGG + chr4.3:22605485-22605504 MS.gene052573:CDS 35.0%
! ACATTAGGCAGTATTTTACC+GGG + chr4.3:22604209-22604228 MS.gene052573:CDS 35.0%
! CAAATCAAGCAGGTTGAATT+TGG + chr4.3:22602388-22602407 MS.gene052573:CDS 35.0%
! CCCACATTTTTATAATCACC+CGG - chr4.3:22601057-22601076 None:intergenic 35.0%
! GAACTTTTATCCGAAGTTTC+AGG - chr4.3:22603626-22603645 None:intergenic 35.0%
! GCACTGATATATGAGAGTTA+GGG - chr4.3:22605199-22605218 None:intergenic 35.0%
! TATTTTGTGTCTGTGATTCC+AGG + chr4.3:22605264-22605283 MS.gene052573:intron 35.0%
!! AGCACTGATATATGAGAGTT+AGG - chr4.3:22605200-22605219 None:intergenic 35.0%
!! CTTTTGATTATGGCCATACT+AGG + chr4.3:22604127-22604146 MS.gene052573:intron 35.0%
!!! CTTGTTTTGTCCTACAGTTT+TGG + chr4.3:22603739-22603758 MS.gene052573:CDS 35.0%
AAACAACAGGGCAAAAACTG+AGG - chr4.3:22602124-22602143 None:intergenic 40.0%
AAATTCAGAAGACCAGACAC+AGG - chr4.3:22604379-22604398 None:intergenic 40.0%
AATCGTAAGTGTATGAGACG+GGG - chr4.3:22604884-22604903 None:intergenic 40.0%
ACAAATAGGCCTGAAACAAC+AGG - chr4.3:22602137-22602156 None:intergenic 40.0%
ACTTCTAGGTGACAAATTGG+TGG - chr4.3:22605650-22605669 None:intergenic 40.0%
AGACAAGCAAATACTCCATG+AGG - chr4.3:22604758-22604777 None:intergenic 40.0%
ATATTTCCCAGGATGGAGAA+CGG + chr4.3:22605578-22605597 MS.gene052573:CDS 40.0%
ATCTCTCTGAGTAAAGTCGA+GGG - chr4.3:22603563-22603582 None:intergenic 40.0%
ATTCCTTCTTTCCCCATACT+CGG - chr4.3:22605475-22605494 None:intergenic 40.0%
ATTCTGAACCCTCTCTTCAT+GGG + chr4.3:22605614-22605633 MS.gene052573:CDS 40.0%
CAAAGCAGAAAAACTCCTTG+TGG - chr4.3:22601365-22601384 None:intergenic 40.0%
CAAATAGGCCTGAAACAACA+GGG - chr4.3:22602136-22602155 None:intergenic 40.0%
CAAGTTGTTCTGTAGAGAGA+GGG - chr4.3:22605318-22605337 None:intergenic 40.0%
CAATCGTAAGTGTATGAGAC+GGG - chr4.3:22604885-22604904 None:intergenic 40.0%
CATGAGATGCTGAAACTGAA+GGG + chr4.3:22604265-22604284 MS.gene052573:CDS 40.0%
CCCTATCAATATTCTTGGAC+CGG - chr4.3:22601140-22601159 None:intergenic 40.0%
CCGGTCCAAGAATATTGATA+GGG + chr4.3:22601137-22601156 MS.gene052573:CDS 40.0%
CTCACCGTAGCAAATATCAA+AGG - chr4.3:22604665-22604684 None:intergenic 40.0%
CTGTTGTGACTCATATGATG+TGG + chr4.3:22604501-22604520 MS.gene052573:CDS 40.0%
CTTCTATGAAGATCCAAGAC+AGG - chr4.3:22602522-22602541 None:intergenic 40.0%
GAATACATGAATCCTGTGTC+TGG + chr4.3:22604364-22604383 MS.gene052573:CDS 40.0%
GCCGGGTGATTATAAAAATG+TGG + chr4.3:22601053-22601072 MS.gene052573:intron 40.0%
GCTGAAGAAACGGTACAAAA+AGG + chr4.3:22605445-22605464 MS.gene052573:CDS 40.0%
GGCAGGTGGAAATAAACATT+AGG + chr4.3:22604194-22604213 MS.gene052573:intron 40.0%
GTAACGAACAAAAGCTGCTT+CGG - chr4.3:22602316-22602335 None:intergenic 40.0%
TAACAGTTAGAGCTTTCAGC+GGG - chr4.3:22605673-22605692 None:intergenic 40.0%
TACTCATGACTCTCACAAGA+AGG + chr4.3:22605801-22605820 MS.gene052573:CDS 40.0%
TATGGACCAAGCTTGAAGAA+GGG + chr4.3:22601270-22601289 MS.gene052573:CDS 40.0%
TATGGCCCAATGTCATGTTT+CGG - chr4.3:22604427-22604446 None:intergenic 40.0%
TCATTACAACTTGTACGCTC+GGG - chr4.3:22602840-22602859 None:intergenic 40.0%
TCATTACCATTTGTCCTCTG+GGG - chr4.3:22602735-22602754 None:intergenic 40.0%
TCCGGTCCAAGAATATTGAT+AGG + chr4.3:22601136-22601155 MS.gene052573:CDS 40.0%
TCGTTAACAGATTCACCTTC+TGG + chr4.3:22600790-22600809 MS.gene052573:intron 40.0%
TGAAGAAGGGGAACATTAAG+AGG + chr4.3:22601283-22601302 MS.gene052573:CDS 40.0%
TGAGCACTTTCAGAAACACT+GGG + chr4.3:22603781-22603800 MS.gene052573:CDS 40.0%
TGCTTGGCAAGTGAAAGTAA+TGG + chr4.3:22602006-22602025 MS.gene052573:CDS 40.0%
TTAGCTGCAAATTTGCCAGA+CGG + chr4.3:22604397-22604416 MS.gene052573:CDS 40.0%
TTATGGACCAAGCTTGAAGA+AGG + chr4.3:22601269-22601288 MS.gene052573:CDS 40.0%
TTCTTCAAGCTTGGTCCATA+AGG - chr4.3:22601270-22601289 None:intergenic 40.0%
TTGAGCACTTTCAGAAACAC+TGG + chr4.3:22603780-22603799 MS.gene052573:CDS 40.0%
TTTCAGAAACACTGGGGAAA+AGG + chr4.3:22603788-22603807 MS.gene052573:CDS 40.0%
! GATCAGAAGGACATTTGTTG+TGG + chr4.3:22602684-22602703 MS.gene052573:CDS 40.0%
! TCAGAGAAAGCGTAAGAACA+AGG + chr4.3:22600636-22600655 MS.gene052573:intron 40.0%
!! AAAAGTATCATGCCCTCCTA+CGG + chr4.3:22602866-22602885 MS.gene052573:CDS 40.0%
!! AAAAGTATCATGCCCTCCTA+TGG + chr4.3:22602866-22602885 MS.gene052573:CDS 40.0%
!! ACAATAGCATTTTGGTCCGA+TGG - chr4.3:22604157-22604176 None:intergenic 40.0%
!! ATGTACTTTGGAGCACATCT+TGG - chr4.3:22603829-22603848 None:intergenic 40.0%
!! TGTTGTTGGTGTTGACAATG+TGG + chr4.3:22600681-22600700 MS.gene052573:intron 40.0%
!!! AGCTATTTTAGCTCCAGTTG+AGG - chr4.3:22605536-22605555 None:intergenic 40.0%
!!! AGTTTTTGCCCTGTTGTTTC+AGG + chr4.3:22602125-22602144 MS.gene052573:intron 40.0%
!!! GTGTGTTTTTTATTGGCAGG+TGG + chr4.3:22604180-22604199 MS.gene052573:intron 40.0%
AAAAGGATCATGCCCTCCTA+CGG + chr4.3:22602968-22602987 MS.gene052573:CDS 45.0%
AACCTCACACCAATCCAAAC+AGG - chr4.3:22603942-22603961 None:intergenic 45.0%
ACATCTTGCATCTCCTCAAC+TGG + chr4.3:22605520-22605539 MS.gene052573:CDS 45.0%
AGATGCTGAAACTGAAGGGA+TGG + chr4.3:22604269-22604288 MS.gene052573:CDS 45.0%
AGCACATCTTGGACCACTAT+AGG - chr4.3:22603818-22603837 None:intergenic 45.0%
AGGACAGTGAAAGTAAGGTC+TGG + chr4.3:22602040-22602059 MS.gene052573:intron 45.0%
ATGGACCAAGCTTGAAGAAG+GGG + chr4.3:22601271-22601290 MS.gene052573:CDS 45.0%
ATGTTCCCCTTCTTCAAGCT+TGG - chr4.3:22601279-22601298 None:intergenic 45.0%
CATCTCTCTGAGTAAAGTCG+AGG - chr4.3:22603564-22603583 None:intergenic 45.0%
CCACCTGTAATTCGATGTGA+GGG - chr4.3:22605167-22605186 None:intergenic 45.0%
CCACTGATGTCCAAAACTGT+AGG - chr4.3:22603752-22603771 None:intergenic 45.0%
CTACTACAACATTGCCTGAG+AGG + chr4.3:22602925-22602944 MS.gene052573:CDS 45.0%
CTCGACTTTACTCAGAGAGA+TGG + chr4.3:22603562-22603581 MS.gene052573:CDS 45.0%
CTGTTGCTAGCTCAGTTTCT+CGG - chr4.3:22602245-22602264 None:intergenic 45.0%
GAGCACTTTCAGAAACACTG+GGG + chr4.3:22603782-22603801 MS.gene052573:CDS 45.0%
GATATTCCGTTCTCCATCCT+GGG - chr4.3:22605587-22605606 None:intergenic 45.0%
GATTCTGAACCCTCTCTTCA+TGG + chr4.3:22605613-22605632 MS.gene052573:CDS 45.0%
GCAAGTTGTTCTGTAGAGAG+AGG - chr4.3:22605319-22605338 None:intergenic 45.0%
GCACAAAGCTCTGTGTCAAA+TGG + chr4.3:22605363-22605382 MS.gene052573:CDS 45.0%
GCATGAGATGCTGAAACTGA+AGG + chr4.3:22604264-22604283 MS.gene052573:CDS 45.0%
GGAGTCCGAAACATGACATT+GGG + chr4.3:22604419-22604438 MS.gene052573:CDS 45.0%
GGGACTTCTAGGTGACAAAT+TGG - chr4.3:22605653-22605672 None:intergenic 45.0%
TACCTGAACGGGAAGTGAAA+GGG + chr4.3:22605407-22605426 MS.gene052573:CDS 45.0%
TAGAACCAATAGGCGATGCT+TGG - chr4.3:22604986-22605005 None:intergenic 45.0%
TAGCTGCAAATTTGCCAGAC+GGG + chr4.3:22604398-22604417 MS.gene052573:CDS 45.0%
TCACTGCAAAACACCTGTCT+TGG + chr4.3:22602506-22602525 MS.gene052573:CDS 45.0%
TCATGCCAAGTGTTTCTCTG+AGG - chr4.3:22604250-22604269 None:intergenic 45.0%
TCTTCGAAAGACATCCCACT+GGG - chr4.3:22605725-22605744 None:intergenic 45.0%
TGACCCTCACATCGAATTAC+AGG + chr4.3:22605161-22605180 MS.gene052573:intron 45.0%
TGCAAGTCCGTTGACAAACT+GGG - chr4.3:22601975-22601994 None:intergenic 45.0%
TGGAGAGAGAAGTTGAGAAG+AGG + chr4.3:22600881-22600900 MS.gene052573:intron 45.0%
TTACCGAGTATGGGGAAAGA+AGG + chr4.3:22605469-22605488 MS.gene052573:CDS 45.0%
TTACCTGAACGGGAAGTGAA+AGG + chr4.3:22605406-22605425 MS.gene052573:CDS 45.0%
TTCAATGTCTTCTTCCTCGC+AGG - chr4.3:22600823-22600842 None:intergenic 45.0%
TTCTTGGACCGGAAGTAATG+CGG - chr4.3:22601129-22601148 None:intergenic 45.0%
TTGCACTTGTAAGGTCTGCT+TGG + chr4.3:22601990-22602009 MS.gene052573:CDS 45.0%
! CTAGGTGACAAATTGGTGGT+AGG - chr4.3:22605646-22605665 None:intergenic 45.0%
! GAGCTTGGTGAATCTAGTAC+AGG + chr4.3:22603197-22603216 MS.gene052573:CDS 45.0%
! TCAACGGACTTGCACTTGTA+AGG + chr4.3:22601981-22602000 MS.gene052573:CDS 45.0%
! TGAACAGTGGATTCCAACTG+AGG - chr4.3:22603856-22603875 None:intergenic 45.0%
! TGTAACCAAGCATCGCCTAT+TGG + chr4.3:22604978-22604997 MS.gene052573:intron 45.0%
!! ATCCTGTTTGGATTGGTGTG+AGG + chr4.3:22603937-22603956 MS.gene052573:CDS 45.0%
!! CTCTGAAGCTTCAAAGACTC+TGG - chr4.3:22600622-22600641 None:intergenic 45.0%
!! GCACCGTATTTTGGATCAGA+AGG + chr4.3:22602671-22602690 MS.gene052573:CDS 45.0%
!!! CCTACAGTTTTGGACATCAG+TGG + chr4.3:22603749-22603768 MS.gene052573:CDS 45.0%
AAAATCTTCATCGGCGACCG+AGG + chr4.3:22600459-22600478 MS.gene052573:CDS 50.0%
ACATTGCCCCAGAGGACAAA+TGG + chr4.3:22602726-22602745 MS.gene052573:CDS 50.0%
AGGAACAGTCCCATGAAGAG+AGG - chr4.3:22605626-22605645 None:intergenic 50.0%
AGGACGACATTTGAGAGACC+CGG - chr4.3:22604230-22604249 None:intergenic 50.0%
AGGCATGCCCAGTTTGTCAA+CGG + chr4.3:22601965-22601984 MS.gene052573:CDS 50.0%
ATCCACCAACCTCCATAGGA+CGG - chr4.3:22602776-22602795 None:intergenic 50.0%
ATCCACCAAGCTCCATAGGA+GGG - chr4.3:22602881-22602900 None:intergenic 50.0%
ATCCCTTTCACTTCCCGTTC+AGG - chr4.3:22605412-22605431 None:intergenic 50.0%
ATTCACCAAGCTCCGTAGGA+GGG - chr4.3:22603190-22603209 None:intergenic 50.0%
CAACTTCAACATTGCCCCAG+AGG + chr4.3:22602718-22602737 MS.gene052573:CDS 50.0%
CATCTTGGACCACTATAGGC+TGG - chr4.3:22603814-22603833 None:intergenic 50.0%
CCCTCACATCGAATTACAGG+TGG + chr4.3:22605164-22605183 MS.gene052573:intron 50.0%
CGATATTCCGTTCTCCATCC+TGG - chr4.3:22605588-22605607 None:intergenic 50.0%
CTACCGAGCTGTTACCTGAA+CGG + chr4.3:22605395-22605414 MS.gene052573:CDS 50.0%
CTACTTCAACATTGCCCGAG+AGG + chr4.3:22602823-22602842 MS.gene052573:CDS 50.0%
CTAGATTCACCAAGCTCCGT+AGG - chr4.3:22603194-22603213 None:intergenic 50.0%
CTGTAACGCCGCATTACTTC+CGG + chr4.3:22601118-22601137 MS.gene052573:CDS 50.0%
GCCACCTGTAATTCGATGTG+AGG - chr4.3:22605168-22605187 None:intergenic 50.0%
GGAACAGTCCCATGAAGAGA+GGG - chr4.3:22605625-22605644 None:intergenic 50.0%
GGGAGTCCGAAACATGACAT+TGG + chr4.3:22604418-22604437 MS.gene052573:CDS 50.0%
GGTTGCTCTTGGAAAGTTGC+AGG + chr4.3:22601158-22601177 MS.gene052573:CDS 50.0%
GTCGTCCTCAGAGAAACACT+TGG + chr4.3:22604242-22604261 MS.gene052573:CDS 50.0%
GTCTTCGAAAGACATCCCAC+TGG - chr4.3:22605726-22605745 None:intergenic 50.0%
GTGCAAGTCCGTTGACAAAC+TGG - chr4.3:22601976-22601995 None:intergenic 50.0%
TACCGAGCTGTTACCTGAAC+GGG + chr4.3:22605396-22605415 MS.gene052573:CDS 50.0%
TCACATCCACCAACCTCCAT+AGG - chr4.3:22602780-22602799 None:intergenic 50.0%
TGCTCTTGGAAAGTTGCAGG+TGG + chr4.3:22601161-22601180 MS.gene052573:intron 50.0%
TTCCCGTTCAGGTAACAGCT+CGG - chr4.3:22605401-22605420 None:intergenic 50.0%
TTGCAGAAAGCAGCTGAGAG+AGG + chr4.3:22603698-22603717 MS.gene052573:CDS 50.0%
! CAAAGCATCATGCCGTCCTA+TGG + chr4.3:22602761-22602780 MS.gene052573:CDS 50.0%
! GAGCTTGATGGACGAGATAC+AGG + chr4.3:22603092-22603111 MS.gene052573:CDS 50.0%
!! CGACAGTGAGCACCGTATTT+TGG + chr4.3:22602662-22602681 MS.gene052573:CDS 50.0%
AGCATCATGCCGTCCTATGG+AGG + chr4.3:22602764-22602783 MS.gene052573:CDS 55.0%
AGCTTCTACCGGACGAACTC+CGG + chr4.3:22600482-22600501 MS.gene052573:CDS 55.0%
ATCCACCAAGCTCCGTAGGA+GGG - chr4.3:22603505-22603524 None:intergenic 55.0%
CATCCACCAAGCTCCATAGG+AGG - chr4.3:22602882-22602901 None:intergenic 55.0%
CCACATCCACCAAGCTCCAT+AGG - chr4.3:22602885-22602904 None:intergenic 55.0%
CTCGCAGGAACAGAACCAGA+AGG - chr4.3:22600808-22600827 None:intergenic 55.0%
GAAGAACCGACGGGAAGCAA+TGG + chr4.3:22600509-22600528 MS.gene052573:CDS 55.0%
GAGCTTTCAGCGGGACTTCT+AGG - chr4.3:22605664-22605683 None:intergenic 55.0%
GATGTGAGGGTCACTGACAC+AGG - chr4.3:22605154-22605173 None:intergenic 55.0%
GATTCACCAAGCTCCGTAGG+AGG - chr4.3:22603191-22603210 None:intergenic 55.0%
GGCCATACTAGGGTTGCCAT+CGG + chr4.3:22604138-22604157 MS.gene052573:intron 55.0%
GGGAAAAGGCCAGCCTATAG+TGG + chr4.3:22603802-22603821 MS.gene052573:CDS 55.0%
GTCCATCAAGCTCCGTAGGA+GGG - chr4.3:22603085-22603104 None:intergenic 55.0%
GTCCGATGGCAACCCTAGTA+TGG - chr4.3:22604143-22604162 None:intergenic 55.0%
TCATGCCCTCCTATGGAGCT+TGG + chr4.3:22602873-22602892 MS.gene052573:CDS 55.0%
TCATGCCGTCCTATGGAGGT+TGG + chr4.3:22602768-22602787 MS.gene052573:CDS 55.0%
TCATGTTTCGGACTCCCGTC+TGG - chr4.3:22604415-22604434 None:intergenic 55.0%
TCTCGTCCATCAAGCTCCGT+AGG - chr4.3:22603089-22603108 None:intergenic 55.0%
TGAGCATTCAGGTGCCCAGT+GGG + chr4.3:22605708-22605727 MS.gene052573:CDS 55.0%
TTCGTCCGGTAGAAGCTCCT+CGG - chr4.3:22600479-22600498 None:intergenic 55.0%
! ATAATCACCCGGCGTCGAAG+CGG - chr4.3:22601046-22601065 None:intergenic 55.0%
! CCTATGGAGCTTGGTGGATG+TGG + chr4.3:22602882-22602901 MS.gene052573:CDS 55.0%
! GAGCTTGGTGGACGAGATAC+AGG + chr4.3:22602990-22603009 MS.gene052573:CDS 55.0%
! GAGCTTGGTGGATGTGGTAC+AGG + chr4.3:22602888-22602907 MS.gene052573:CDS 55.0%
!! CTTCTGGTTCTGTTCCTGCG+AGG + chr4.3:22600806-22600825 MS.gene052573:intron 55.0%
!! GAGGTTGGTGGATGTGACAC+AGG + chr4.3:22602783-22602802 MS.gene052573:CDS 55.0%
ATATCACCCGCTTCGACGCC+GGG + chr4.3:22601036-22601055 MS.gene052573:intron 60.0%
CATCCACCAAGCTCCGTAGG+AGG - chr4.3:22603506-22603525 None:intergenic 60.0%
CCACATCCACCAAGCTCCGT+AGG - chr4.3:22603509-22603528 None:intergenic 60.0%
CCAGTGTTCGAGCTGCCACA+AGG + chr4.3:22601347-22601366 MS.gene052573:CDS 60.0%
CCTTGTGGCAGCTCGAACAC+TGG - chr4.3:22601350-22601369 None:intergenic 60.0%
CGTCCATCAAGCTCCGTAGG+AGG - chr4.3:22603086-22603105 None:intergenic 60.0%
CTACTTCAACGTCGCCCGAG+AGG + chr4.3:22603447-22603466 MS.gene052573:CDS 60.0%
CTCCGGTGTGGAAGAACCGA+CGG + chr4.3:22600499-22600518 MS.gene052573:CDS 60.0%
CTGAGCATTCAGGTGCCCAG+TGG + chr4.3:22605707-22605726 MS.gene052573:CDS 60.0%
CTTCCACACCGGAGTTCGTC+CGG - chr4.3:22600493-22600512 None:intergenic 60.0%
GAACCGACGGGAAGCAATGG+CGG + chr4.3:22600512-22600531 MS.gene052573:CDS 60.0%
GATATCACCCGCTTCGACGC+CGG + chr4.3:22601035-22601054 MS.gene052573:intron 60.0%
GCGGTGCAAGAGGAGAGTGA+TGG + chr4.3:22600531-22600550 MS.gene052573:CDS 60.0%
GGAAGCAATGGCGGTGCAAG+AGG + chr4.3:22600521-22600540 MS.gene052573:CDS 60.0%
GTCCACCAAGCTCCGTAGGA+GGG - chr4.3:22602983-22603002 None:intergenic 60.0%
TCATGCCCTCCTACGGAGCT+TGG + chr4.3:22602975-22602994 MS.gene052573:CDS 60.0%
TCCGGTGTGGAAGAACCGAC+GGG + chr4.3:22600500-22600519 MS.gene052573:CDS 60.0%
TCTCGTCCACCAAGCTCCGT+AGG - chr4.3:22602987-22603006 None:intergenic 60.0%
TGCCCTCCTACGGAGCTTGA+TGG + chr4.3:22603080-22603099 MS.gene052573:CDS 60.0%
TGCCCTCCTATGGAGCTTGG+TGG + chr4.3:22602876-22602895 MS.gene052573:CDS 60.0%
TGCCGTCCTATGGAGGTTGG+TGG + chr4.3:22602771-22602790 MS.gene052573:CDS 60.0%
! CCTACGGAGCTTGGTGGATG+TGG + chr4.3:22603506-22603525 MS.gene052573:CDS 60.0%
! CTCCTACGGAGCTTGGTGGA+CGG + chr4.3:22602982-22603001 MS.gene052573:CDS 60.0%
! TAATCACCCGGCGTCGAAGC+GGG - chr4.3:22601045-22601064 None:intergenic 60.0%
! TCCTACGGAGCTTGGTGGAC+GGG + chr4.3:22602983-22603002 MS.gene052573:CDS 60.0%
!! TCCCGTCGGTTCTTCCACAC+CGG - chr4.3:22600504-22600523 None:intergenic 60.0%
CGTCCACCAAGCTCCGTAGG+AGG - chr4.3:22602984-22603003 None:intergenic 65.0%
CTACCGGACGAACTCCGGTG+TGG + chr4.3:22600487-22600506 MS.gene052573:CDS 65.0%
GCACCGCCATTGCTTCCCGT+CGG - chr4.3:22600518-22600537 None:intergenic 65.0%
GGCGACCGAGGAGCTTCTAC+CGG + chr4.3:22600471-22600490 MS.gene052573:CDS 65.0%
TCCCGTCCACCAAGCTCCGT+AGG - chr4.3:22603299-22603318 None:intergenic 65.0%
TGCCCTCCTACGGAGCTTGG+TGG + chr4.3:22602978-22602997 MS.gene052573:CDS 65.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 22600451 22605870 22600451 ID=MS.gene052573
chr4.3 mRNA 22600451 22605870 22600451 ID=MS.gene052573.t1;Parent=MS.gene052573
chr4.3 exon 22600451 22600646 22600451 ID=MS.gene052573.t1.exon1;Parent=MS.gene052573.t1
chr4.3 CDS 22600451 22600646 22600451 ID=cds.MS.gene052573.t1;Parent=MS.gene052573.t1
chr4.3 exon 22601097 22601179 22601097 ID=MS.gene052573.t1.exon2;Parent=MS.gene052573.t1
chr4.3 CDS 22601097 22601179 22601097 ID=cds.MS.gene052573.t1;Parent=MS.gene052573.t1
chr4.3 exon 22601261 22601400 22601261 ID=MS.gene052573.t1.exon3;Parent=MS.gene052573.t1
chr4.3 CDS 22601261 22601400 22601261 ID=cds.MS.gene052573.t1;Parent=MS.gene052573.t1
chr4.3 exon 22601936 22602056 22601936 ID=MS.gene052573.t1.exon4;Parent=MS.gene052573.t1
chr4.3 CDS 22601936 22602056 22601936 ID=cds.MS.gene052573.t1;Parent=MS.gene052573.t1
chr4.3 exon 22602147 22602279 22602147 ID=MS.gene052573.t1.exon5;Parent=MS.gene052573.t1
chr4.3 CDS 22602147 22602279 22602147 ID=cds.MS.gene052573.t1;Parent=MS.gene052573.t1
chr4.3 exon 22602368 22602431 22602368 ID=MS.gene052573.t1.exon6;Parent=MS.gene052573.t1
chr4.3 CDS 22602368 22602431 22602368 ID=cds.MS.gene052573.t1;Parent=MS.gene052573.t1
chr4.3 exon 22602503 22603958 22602503 ID=MS.gene052573.t1.exon7;Parent=MS.gene052573.t1
chr4.3 CDS 22602503 22603958 22602503 ID=cds.MS.gene052573.t1;Parent=MS.gene052573.t1
chr4.3 exon 22604199 22604522 22604199 ID=MS.gene052573.t1.exon8;Parent=MS.gene052573.t1
chr4.3 CDS 22604199 22604522 22604199 ID=cds.MS.gene052573.t1;Parent=MS.gene052573.t1
chr4.3 exon 22605286 22605870 22605286 ID=MS.gene052573.t1.exon9;Parent=MS.gene052573.t1
chr4.3 CDS 22605286 22605870 22605286 ID=cds.MS.gene052573.t1;Parent=MS.gene052573.t1
Gene Sequence

>MS.gene052573

ATGGCGAGAAAATCTTCATCGGCGACCGAGGAGCTTCTACCGGACGAACTCCGGTGTGGAAGAACCGACGGGAAGCAATGGCGGTGCAAGAGGAGAGTGATGGATAATCTGAAACTGTGTGAGATTCATTATCTTCAAGGGAAGCATCGTCAATATAGAGAAAAGGTACCAGAGTCTTTGAAGCTTCAGAGAAAGCGTAAGAACAAGGAAGAAGAACAAGAACAAGAAACTGTTGTTGGTGTTGACAATGTGGAAGAAACAGTTAGGGTAGAAAAAGAGTTCAAAATGGAGCTGAGAAAAACTAAGAAGAAGAAAGTGAAGCTTGCAGAGAGTTCTGAATCGTTAACAGATTCACCTTCTGGTTCTGTTCCTGCGAGGAAGAAGACATTGAAGCAATGTGATACACAATTGGATCTTATAAGAATGGTCTTGGAGAGAGAAGTTGAGAAGAGGAAAAGAAACAATACCAATAAGAAGAAGAATAAGAAAAAGAAGATGAAGAAAAAAGTGATTAAGGAAGAAGTGGAATTGCATGATTTTAAAGAAGGTGAGTTGAGGAGAGAATTACCAAATGGAGTAATGGAGATATCACCCGCTTCGACGCCGGGTGATTATAAAAATGTGGGGACTCATTGTGATGTGAAAGTTGGTGATCATAAGATTGTAGCTGTAACGCCGCATTACTTCCGGTCCAAGAATATTGATAGGGTTGCTCTTGGAAAGTTGCAGGTGGATTGCTTCTGTTGTTTATAATTATATCTATCAATTTTCTGTGTTTTTTGTCTCTTCTGAAATAACTCTTTTATTTAGGTTGTGCCTTATGGACCAAGCTTGAAGAAGGGGAACATTAAGAGGAAGTGTCACTCATGCCAGAGAAGTGATTCTTTGAATCTTGTCCAGTGTTCGAGCTGCCACAAGGAGTTTTTCTGCTTTGATTGTATAAGAGATCGGTTTGTTATTCTTACATTCATTTACTGTGTATTTGTCACTATGTAGATGTTTACACTTGTTTTGAAGTTTTATGTTGTGCTGAATTTGTTACTTTGTTGGAATTCTCATCATGCATTGTAGGCTATTTAGCTCTATTTGAAAGCTTGCTGATTTTGATTCTATAGGGATGTATGTGCTATGTTATTCTTTTGGGGCAATGCAGAAACTTGAATTTTAAAAAGCACAATTTCATATGGTAAAAACATAGTTAGAGGTTAGGCCCCTTTTGATTTTCTTAAGAGAGATGCATGGCGTGATTATCTTTGTCGACAGAAGTTAAGAAGAAAATCATGAAATTTAAAAATGAAAACAGAAAACCTTGCTAGCGAATCATTATCTTTTATTCTCTGCGTAATTTGCAGAAATAGTAATACCAGATGGATCAATGATGATTTGTGCTAAGATAAAATTTATAAATGTGATTTATGTAGTCCGTTGCTCTTGAATTGAGAATTAAAACATGAAATGTTATTCAAAACTTTTTGACACAAATAGGTATCTTGACACTAGAAAAGAAGTTAAGAAGGCATGCCCAGTTTGTCAACGGACTTGCACTTGTAAGGTCTGCTTGGCAAGTGAAAGTAATGGCAGTGAAAGTAAGGACAGTGAAAGTAAGGTCTGGCATCAAACACACGTGCTTTTCTACTTGAACAATGTTTCATTGATAGCATATTCTGATACCTCAGTTTTTGCCCTGTTGTTTCAGGCCTATTTGTCTAGCAAAAGTAGAGTTGATAGAATACTCCATTTTCATTATTTGATTTGCATGCTCCTTCCATTACTAAAGCGAATAAGTGAAAACCGAGAAACTGAGCTAGCAACAGAAGCAAAAATTAAAGGTAGTAATTTTCATTCTTTTAAAATGATGTTTTCCGAAGCAGCTTTTGTTCGTTACAAATGTATCTTAGATGTCATGTTGTGTAACAGGGAAAAGTATTTCTGATATTCAAATCAAGCAGGTTGAATTTGGTTACAGTGAAAATATTTGCTGGTAAGCTCTCGTCTATAGATGCTATTAAAAAAATGTCAATCTGGTTGTTAACTAATGTTCTCTGGTCTCAGCAATCACTGCAAAACACCTGTCTTGGATCTTCATAGAAGCTGTGATAGTTGTTCATATAGCCTATGCTTAAGATGTTGTGAGAAATTATGTCAAGGAAGAACTTCTGGAGAAATTAACTCATCTTTCTTGAAGCGACGTGATCAAATGAAAGCTTGTGTCGACAGTGAGCACCGTATTTTGGATCAGAAGGACATTTGTTGTGGCAATTTAACTGCAACTTCAACATTGCCCCAGAGGACAAATGGTAATGATATTGACAAAGCATCATGCCGTCCTATGGAGGTTGGTGGATGTGACACAGGCCTATTTGATTTAACTGCTACTTCAACATTGCCCGAGCGTACAAGTTGTAATGATATTCAAAAAGTATCATGCCCTCCTATGGAGCTTGGTGGATGTGGTACAGGCCTGCTTGATTTAACTACTACAACATTGCCTGAGAGGACAAATTGTAATGACAGCGAAAAAGGATCATGCCCTCCTACGGAGCTTGGTGGACGAGATACAGGTCTGCTTGATTTAACTACTACTTCGTTGCCCGAGATGACAAATTGTAATGATAGCAAAAAAGTATCATGCCCTCCTACGGAGCTTGATGGACGAGATACAGGTCTGCTTGATTTAACTGCTACTTCAACATTGCCCGAGATGACCAATTTTAGTGATAGCGAAAAAGTATCATGCCCTCCTACGGAGCTTGGTGAATCTAGTACAGGTCTGCTTGATTTAACTGCTACTTCAACATTGCCCGAGAGGACAAATTGTAATGATATTGAAAAAGTATCATGCCCTCCTACGGAGCTTGGTGGACGGGATACAGACCTGCTTGATTTAACTGCTACTTCAACATTGCCCGAGAGGACAAATTGTAATGATATCGAAAAAGTATCATGCCCTCCTACGGAGCTTGGTGGACGAGATACAGACATGCTTGATTTAACTGCTACTTCAACGTCGCCCGAGAGGACAAATTGTAATGATATTGAAAAAGTATCATGCCCTCCTACGGAGCTTGGTGGATGTGGTACAGGCCTTCTTGATTTATTATGCATTTTTCCCTCGACTTTACTCAGAGAGATGGAAGTAAAAGCAGAAGAAATTGTTTGTAGCTATGACTTTCCTGAAACTTCGGATAAAAGTTCAAGCTGCTCACTGTGTTTTGACACCGACCTTAATACTGATCGATATAATCAGTTGCAGAAAGCAGCTGAGAGAGGAGATTCATCAGATAATTGCTTGTTTTGTCCTACAGTTTTGGACATCAGTGGTGATAACTTTGAGCACTTTCAGAAACACTGGGGAAAAGGCCAGCCTATAGTGGTCCAAGATGTGCTCCAAAGTACATCAAACCTCAGTTGGAATCCACTGTTCATGTTCTGTACTTATCTTGAGCAGAGCATTACAATGTATGAGAATAATAAAGAGTTACTTGAATCCTGTTTGGATTGGTGTGAGGTTAGTATATCAACCAATCATACGTCAAACTTCTTTTAAAGTGATTTCTTAATCTGATACTTCTATTTGACCCAAAAAAGGTTAACACTATCATATAATAATATATATTATATTCAAAATATTTGTTTATTATAAATATAGACTAAGATTTAGTGCATTTAGTTGTTCCTTTTGATTATGGCCATACTAGGGTTGCCATCGGACCAAAATGCTATTGTTAAGTGTGTTTTTTATTGGCAGGTGGAAATAAACATTAGGCAGTATTTTACCGGGTCTCTCAAATGTCGTCCTCAGAGAAACACTTGGCATGAGATGCTGAAACTGAAGGGATGGCTGTCTTCCCAAGTATTCAAAGAGCAGTTTCCAGCTCATTTTTCTGAAGTAATTGATGCTCTACCAGTTCAAGAATACATGAATCCTGTGTCTGGTCTTCTGAATTTAGCTGCAAATTTGCCAGACGGGAGTCCGAAACATGACATTGGGCCATATGTCTATATTTCGTATGGCTGTGCTGACACAGAAGCTGATTCTGTGACAAAACTCTGTTGTGACTCATATGATGTGGTGCGTGACCTTGTTATATTACTGTTCATCTCTTCTTAAACACATCTAGATTAATACTTCCCTGCATTTAAGACTTTATTTTCTTAATTTAACCTATATCATGTTAAAGTGATTTCAACTATAATGGGTTAAAATATTTCCTTTGATATTTGCTACGGTGAGAAATTGTATGTGTGCATATATCCTATCGTGATAACTTAATGTGGATCTCGTCTTCTGAAAGAATAAGCATCCTCATGGAGTATTTGCTTGTCTTGAAGATTGTTTTGTGCAATATAAGGTTATATTGTTTGCAATACTGTACTTGTTTGAGATCTGAAAGTGAAAATATGAAATGTGTTGTCAATAAAAGTTATAACCCCGTCTCATACACTTACGATTGTCTTTATAATAATAAAAAAAAAAAATACTCTTATAGTTGTCCAATCCTAATATATAAAAATGAATTTGGAAATTGTAACCAAGCATCGCCTATTGGTTCTATTTCTGATTCATAACTAGAAAATATATTTGCAGCGAATAGTGTGAAAAACGTTGAAAAGTTGATACCAAAAAACCTAGTCATTTCCTTTGTGCAATTCGTGATCATTTTATTTGTTCTAGCTTTATAATAAGGATTTAAAATTGGCCTGTGTCAGTGACCCTCACATCGAATTACAGGTGGCTACTGATTCCCTAACTCTCATATATCAGTGCTCTCTTTGTTAGTTTTAAAATAAGTTTTCTGTAGATAATCAATGCTATTTTGTGTCTGTGATTCCAGGTTAATATTATGACACATTCTGCGGATGTCCCTCTCTCTACAGAACAACTTGCAAAAATAAGGAAATTGTTGAAGAAGCACAAAGCTCTGTGTCAAATGGAGTCTGTTGCTACCGAGCTGTTACCTGAACGGGAAGTGAAAGGGATGCCATTATCACATGCTGAAGAAACGGTACAAAAAGGTTTACCGAGTATGGGGAAAGAAGGAATCGAGTTTTTCAGGAGAGTCGATAGAACATCTTGCATCTCCTCAACTGGAGCTAAAATAGCTTCTACTCAGAGCATATACAACAATATTTCCCAGGATGGAGAACGGAATATCGTTTCTGATTCTGAACCCTCTCTTCATGGGACTGTTCCTACCACCAATTTGTCACCTAGAAGTCCCGCTGAAAGCTCTAACTGTTATAAGAAAAAGTTCACTGAGCATTCAGGTGCCCAGTGGGATGTCTTTCGAAGACAAGATGTGCCAAAGCTCGTAGAATACATTAAAAGACACTACGATGAACTTACTAATACTCATGACTCTCACAAGAAGGCAAGTTCAATGTTAGACGATTCCTTGGAAATTTTTTGGAATTGTTGA
Protein sequence

>MS.gene052573.t1

MARKSSSATEELLPDELRCGRTDGKQWRCKRRVMDNLKLCEIHYLQGKHRQYREKVPESLKLQRKLGDHKIVAVTPHYFRSKNIDRVALGKLQVVPYGPSLKKGNIKRKCHSCQRSDSLNLVQCSSCHKEFFCFDCIRDRYLDTRKEVKKACPVCQRTCTCKVCLASESNGSESKDSESKAYLSSKSRVDRILHFHYLICMLLPLLKRISENRETELATEAKIKGKSISDIQIKQVEFGYSENICCNHCKTPVLDLHRSCDSCSYSLCLRCCEKLCQGRTSGEINSSFLKRRDQMKACVDSEHRILDQKDICCGNLTATSTLPQRTNGNDIDKASCRPMEVGGCDTGLFDLTATSTLPERTSCNDIQKVSCPPMELGGCGTGLLDLTTTTLPERTNCNDSEKGSCPPTELGGRDTGLLDLTTTSLPEMTNCNDSKKVSCPPTELDGRDTGLLDLTATSTLPEMTNFSDSEKVSCPPTELGESSTGLLDLTATSTLPERTNCNDIEKVSCPPTELGGRDTDLLDLTATSTLPERTNCNDIEKVSCPPTELGGRDTDMLDLTATSTSPERTNCNDIEKVSCPPTELGGCGTGLLDLLCIFPSTLLREMEVKAEEIVCSYDFPETSDKSSSCSLCFDTDLNTDRYNQLQKAAERGDSSDNCLFCPTVLDISGDNFEHFQKHWGKGQPIVVQDVLQSTSNLSWNPLFMFCTYLEQSITMYENNKELLESCLDWCEVEINIRQYFTGSLKCRPQRNTWHEMLKLKGWLSSQVFKEQFPAHFSEVIDALPVQEYMNPVSGLLNLAANLPDGSPKHDIGPYVYISYGCADTEADSVTKLCCDSYDVVNIMTHSADVPLSTEQLAKIRKLLKKHKALCQMESVATELLPEREVKGMPLSHAEETVQKGLPSMGKEGIEFFRRVDRTSCISSTGAKIASTQSIYNNISQDGERNIVSDSEPSLHGTVPTTNLSPRSPAESSNCYKKKFTEHSGAQWDVFRRQDVPKLVEYIKRHYDELTNTHDSHKKASSMLDDSLEIFWNC