Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052607.t1 | XP_024635817.1 | 61 | 636 | 77 | 8 | 1 | 631 | 102 | 571 | 2.90E-187 | 665.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052607.t1 | Q6K5K2 | 29.0 | 193 | 123 | 4 | 2 | 185 | 392 | 579 | 4.5e-11 | 71.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052607.t1 | A0A1S2YA87 | 39.7 | 650 | 179 | 11 | 2 | 631 | 45 | 501 | 5.9e-97 | 364.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene052607.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052607 | MS.gene98271 | 0.909787 | 3.87E-82 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052607.t1 | MTR_3g075140 | 76.119 | 201 | 35 | 4 | 1 | 198 | 61 | 251 | 6.49e-75 | 240 |
| MS.gene052607.t1 | MTR_3g075130 | 83.019 | 53 | 9 | 0 | 502 | 554 | 46 | 98 | 1.00e-22 | 93.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 116 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATTGCAAATGAACAAAT+TGG | 0.173912 | 3.3:-64777132 | None:intergenic |
| GCCAAAGCCAAATGTTATTA+AGG | 0.179207 | 3.3:+64776678 | MS.gene052607:CDS |
| GAAACAACTTCTACGCTATT+TGG | 0.184746 | 3.3:-64774535 | None:intergenic |
| TTCAGCAAACAGATCCTTAT+TGG | 0.209131 | 3.3:-64775267 | None:intergenic |
| TTCAGCAAACAGGTCCTTAT+TGG | 0.223966 | 3.3:-64775053 | None:intergenic |
| CAATGTGAATTTGAGGATTT+AGG | 0.237332 | 3.3:-64775430 | None:intergenic |
| GCATGTGAACTTGAAACTTC+TGG | 0.292503 | 3.3:+64775001 | MS.gene052607:CDS |
| GCATGTGAACTTGAAACTTC+TGG | 0.292503 | 3.3:+64775215 | MS.gene052607:CDS |
| AACTCTCCCTTAATAACATT+TGG | 0.298918 | 3.3:-64776685 | None:intergenic |
| CAGATCCTTATTGGACATAA+TGG | 0.316742 | 3.3:-64775258 | None:intergenic |
| AAGATGGTAATGTAGATAGA+AGG | 0.318676 | 3.3:+64774560 | MS.gene052607:CDS |
| TCGGCTCACAAGCTTGAAAA+AGG | 0.326977 | 3.3:+64774337 | MS.gene052607:CDS |
| TATTTCCAATGGAGAAGTTC+AGG | 0.343096 | 3.3:+64775758 | MS.gene052607:CDS |
| ACTTGACGTGCCAATGCATA+TGG | 0.351764 | 3.3:+64774492 | MS.gene052607:CDS |
| CCCTTAATAACATTTGGCTT+TGG | 0.353606 | 3.3:-64776679 | None:intergenic |
| AGAATCCATTATGTCCAATA+AGG | 0.365908 | 3.3:+64775253 | MS.gene052607:CDS |
| AATTTCCTCTTTGAACATGA+TGG | 0.372502 | 3.3:-64776137 | None:intergenic |
| AGAATCCATTATGTCCAATA+AGG | 0.374966 | 3.3:+64775039 | MS.gene052607:CDS |
| AGCCAAGTCACCGAGAGTTT+TGG | 0.375722 | 3.3:+64774757 | MS.gene052607:CDS |
| TGTTACAGCCCATCTCTTAC+CGG | 0.383658 | 3.3:-64774260 | None:intergenic |
| CAATGAGATGACAAATGATA+TGG | 0.387382 | 3.3:+64776353 | MS.gene052607:CDS |
| AATGAAAATTTGAATGCAAC+AGG | 0.392051 | 3.3:+64777149 | MS.gene052607:CDS |
| CCAAAGCCAAATGTTATTAA+GGG | 0.399077 | 3.3:+64776679 | MS.gene052607:CDS |
| CGTAATCCAGCGCGAGATAG+TGG | 0.405348 | 3.3:-64777655 | None:intergenic |
| CAGGTCCTTATTGGACATAA+TGG | 0.407699 | 3.3:-64775044 | None:intergenic |
| TACCGAAGCCTTCAGAAAAC+TGG | 0.412567 | 3.3:-64776168 | None:intergenic |
| TCATTGCAAATGAACAAATT+GGG | 0.414322 | 3.3:-64777131 | None:intergenic |
| TTTGAAGAAGTGTTGGGCTC+AGG | 0.414789 | 3.3:+64774673 | MS.gene052607:CDS |
| AGAGCGGCCAAAGGTTGTTA+AGG | 0.418441 | 3.3:+64775698 | MS.gene052607:intron |
| AGCCCATCTCTTACCGGTTG+AGG | 0.418637 | 3.3:-64774254 | None:intergenic |
| CTCATACGCTTCTAAATCGT+TGG | 0.425403 | 3.3:+64774702 | MS.gene052607:CDS |
| ATCTGAGTCATGATTTACTT+TGG | 0.428076 | 3.3:-64776005 | None:intergenic |
| ATAGCAAATAATATTAAATC+AGG | 0.430447 | 3.3:+64777781 | MS.gene052607:CDS |
| CTCGAGGATTCAACCTCAAC+CGG | 0.431548 | 3.3:+64774241 | MS.gene052607:CDS |
| CAACGATTTAGAAGCGTATG+AGG | 0.431571 | 3.3:-64774701 | None:intergenic |
| AAATCCTACCATGTCATTGT+TGG | 0.435100 | 3.3:+64774201 | MS.gene052607:CDS |
| ACTTTGATCATCTGAGAGAT+TGG | 0.438569 | 3.3:-64776980 | None:intergenic |
| GTAGAAGTTGTTTCAGAAGA+TGG | 0.439449 | 3.3:+64774544 | MS.gene052607:CDS |
| AATTTCATTGAACCTCTGTT+TGG | 0.446936 | 3.3:-64776956 | None:intergenic |
| TTGTCAACGAAGTTTGTTCA+AGG | 0.455984 | 3.3:-64777738 | None:intergenic |
| TACCTAAGCCTTCAGCAAAC+AGG | 0.461021 | 3.3:-64775063 | None:intergenic |
| ATTTCAGAAGTCATGTTCAT+AGG | 0.463203 | 3.3:-64776517 | None:intergenic |
| GACGCACCAATGTGAATTTG+AGG | 0.465177 | 3.3:-64775437 | None:intergenic |
| GAGGATGGTGGTGATACTTA+AGG | 0.478584 | 3.3:+64777684 | MS.gene052607:CDS |
| GAGCGGCCAAAGGTTGTTAA+GGG | 0.481719 | 3.3:+64775699 | MS.gene052607:intron |
| CTTGACGTGCCAATGCATAT+GGG | 0.487224 | 3.3:+64774493 | MS.gene052607:CDS |
| TCTTTCTTAATAATAATCTC+TGG | 0.487369 | 3.3:-64777258 | None:intergenic |
| GATCTGTTTGCTGAAGGCTT+AGG | 0.490003 | 3.3:+64775275 | MS.gene052607:CDS |
| GCACTCCTGAACTTCTCCAT+TGG | 0.495019 | 3.3:-64775763 | None:intergenic |
| GAAACTTGAAGAAAATAAAG+AGG | 0.495114 | 3.3:+64776108 | MS.gene052607:CDS |
| TACCAAAACTCTCGGTGACT+TGG | 0.498675 | 3.3:-64774759 | None:intergenic |
| TGGAGAAGTTCAGGAGTGCC+AGG | 0.499155 | 3.3:+64775767 | MS.gene052607:CDS |
| GAACACCTCACAGGAGATAG+TGG | 0.505357 | 3.3:-64776743 | None:intergenic |
| ATGATAAGTCTATGTGTGAA+AGG | 0.505569 | 3.3:+64774413 | MS.gene052607:CDS |
| AGATGGTAATGTAGATAGAA+GGG | 0.509570 | 3.3:+64774561 | MS.gene052607:CDS |
| AACAGATCGATTATTTCCAA+TGG | 0.515207 | 3.3:+64775747 | MS.gene052607:CDS |
| TTGCACCTCTCTTCAGCCGC+CGG | 0.523707 | 3.3:-64775392 | None:intergenic |
| CAACCTCAACCGGTAAGAGA+TGG | 0.526023 | 3.3:+64774251 | MS.gene052607:CDS |
| TTGAAGAAGTGTTGGGCTCA+GGG | 0.526257 | 3.3:+64774674 | MS.gene052607:CDS |
| TGCCAGGTTGCGATGAGCTT+AGG | 0.529422 | 3.3:+64775783 | MS.gene052607:CDS |
| AAATTGGGAGTAATTTCCAT+TGG | 0.531889 | 3.3:-64777116 | None:intergenic |
| TCCTATGTTTGAAGAAGTGT+TGG | 0.533675 | 3.3:+64774666 | MS.gene052607:CDS |
| GACCTGTTTGCTGAAGGCTT+AGG | 0.536114 | 3.3:+64775061 | MS.gene052607:CDS |
| ACGAAGTTTGTTCAAGGCAA+AGG | 0.538459 | 3.3:-64777732 | None:intergenic |
| GATCAAGCAGCGAAATTCAA+AGG | 0.540326 | 3.3:+64774962 | MS.gene052607:CDS |
| ATGGTAGGATTTAACTTAGG+AGG | 0.553387 | 3.3:-64774190 | None:intergenic |
| TTGACGTGCCAATGCATATG+GGG | 0.554500 | 3.3:+64774494 | MS.gene052607:CDS |
| GATCAAGCAGCGATATTCAA+AGG | 0.555526 | 3.3:+64775176 | MS.gene052607:CDS |
| AATAAGGACCTGTTTGCTGA+AGG | 0.555855 | 3.3:+64775055 | MS.gene052607:CDS |
| AACCTCAACCGGTAAGAGAT+GGG | 0.557870 | 3.3:+64774252 | MS.gene052607:CDS |
| GAACAAACTTCGTTGACAAG+TGG | 0.558965 | 3.3:+64777742 | MS.gene052607:CDS |
| AATAAGGATCTGTTTGCTGA+AGG | 0.559694 | 3.3:+64775269 | MS.gene052607:CDS |
| ATGCATCATTTAGATCTACA+TGG | 0.559779 | 3.3:-64774627 | None:intergenic |
| TTCAATTGCAGAGCGGCCAA+AGG | 0.561117 | 3.3:+64775689 | MS.gene052607:intron |
| CCTACCATGTCATTGTTGGT+TGG | 0.564330 | 3.3:+64774205 | MS.gene052607:CDS |
| GGTGATACTTAAGGATGCAC+TGG | 0.567579 | 3.3:+64777693 | MS.gene052607:CDS |
| AAGAGAAGTAGATGCAGCAG+TGG | 0.569759 | 3.3:+64774466 | MS.gene052607:CDS |
| TGCACTGGAGAGATTGTGGC+CGG | 0.570410 | 3.3:+64777708 | MS.gene052607:CDS |
| GTTTGTTCAAGGCAAAGGAC+CGG | 0.572102 | 3.3:-64777727 | None:intergenic |
| TACCTAAGCTCATCGCAACC+TGG | 0.573695 | 3.3:-64775785 | None:intergenic |
| AATTATGGTACCAAAACTCT+CGG | 0.575030 | 3.3:-64774767 | None:intergenic |
| AGGATGCACTGGAGAGATTG+TGG | 0.575956 | 3.3:+64777704 | MS.gene052607:CDS |
| ACTTCTGGAAGAAGCAAAGA+GGG | 0.576572 | 3.3:+64775016 | MS.gene052607:CDS |
| TGAAAAGAAGAAAATGCCAA+TGG | 0.577507 | 3.3:+64777100 | MS.gene052607:CDS |
| AAACTTGAAGAAAATAAAGA+GGG | 0.577987 | 3.3:+64776109 | MS.gene052607:CDS |
| TGGATTACGTTCAAAGAGGA+TGG | 0.586400 | 3.3:+64777669 | MS.gene052607:CDS |
| GTGATCCGGCGGCTGAAGAG+AGG | 0.590760 | 3.3:+64775387 | MS.gene052607:CDS |
| GACATGGTAGGATTTAACTT+AGG | 0.591746 | 3.3:-64774193 | None:intergenic |
| CCCAACACTTCTTCAAACAT+AGG | 0.592689 | 3.3:-64774667 | None:intergenic |
| CCAACCAACAATGACATGGT+AGG | 0.598154 | 3.3:-64774205 | None:intergenic |
| TGCTTGCCACTATCTCGCGC+TGG | 0.598241 | 3.3:+64777649 | MS.gene052607:CDS |
| CCTATGTTTGAAGAAGTGTT+GGG | 0.601870 | 3.3:+64774667 | MS.gene052607:CDS |
| TGATAAGTCTATGTGTGAAA+GGG | 0.602703 | 3.3:+64774414 | MS.gene052607:CDS |
| TTCTTAATAATAATCTCTGG+CGG | 0.603010 | 3.3:-64777255 | None:intergenic |
| GTAACAGTATCAAAAGCTGA+TGG | 0.606610 | 3.3:+64774277 | MS.gene052607:CDS |
| CTTACCAACCAACAATGACA+TGG | 0.609549 | 3.3:-64774209 | None:intergenic |
| CTAAATCCTCAAATTCACAT+TGG | 0.614716 | 3.3:+64775431 | MS.gene052607:CDS |
| ATTATGAATGAACACCTCAC+AGG | 0.618032 | 3.3:-64776752 | None:intergenic |
| AATGATAAATTGAATGAACC+AGG | 0.618698 | 3.3:+64776550 | MS.gene052607:CDS |
| GACTCTACTAACATCACTTG+TGG | 0.623454 | 3.3:-64777864 | None:intergenic |
| AGCGGCCAAAGGTTGTTAAG+GGG | 0.624198 | 3.3:+64775700 | MS.gene052607:CDS |
| TCAGATGATCAAAGTCACAT+TGG | 0.632225 | 3.3:+64776988 | MS.gene052607:CDS |
| AACTTCTGGAAGAAGCAAAG+AGG | 0.635663 | 3.3:+64775015 | MS.gene052607:CDS |
| TGAAGAAGTGTTGGGCTCAG+GGG | 0.642137 | 3.3:+64774675 | MS.gene052607:CDS |
| CAGATCCATCATGTTCAAAG+AGG | 0.644431 | 3.3:+64776132 | MS.gene052607:CDS |
| AAACTTCGTTGACAAGTGGA+TGG | 0.647156 | 3.3:+64777746 | MS.gene052607:CDS |
| TGGTAAGAAAATCTATCTCG+AGG | 0.647585 | 3.3:+64774225 | MS.gene052607:CDS |
| GCGGCCAAAGGTTGTTAAGG+GGG | 0.658866 | 3.3:+64775701 | MS.gene052607:CDS |
| AACTTCTGGAAGAAGCAAAG+AGG | 0.665509 | 3.3:+64775229 | MS.gene052607:CDS |
| GCGCTGGATTACGTTCAAAG+AGG | 0.684747 | 3.3:+64777665 | MS.gene052607:CDS |
| ATGGATGCACGAATGCACAT+TGG | 0.687374 | 3.3:+64776372 | MS.gene052607:CDS |
| ATTACGTTCAAAGAGGATGG+TGG | 0.691182 | 3.3:+64777672 | MS.gene052607:CDS |
| TGCAGCCACTATCTCCTGTG+AGG | 0.708925 | 3.3:+64776738 | MS.gene052607:CDS |
| AGATGAAACTGTGAGCTCTG+TGG | 0.734871 | 3.3:+64777290 | MS.gene052607:CDS |
| TGACGTGCCAATGCATATGG+GGG | 0.743356 | 3.3:+64774495 | MS.gene052607:CDS |
| AACATGACTTCTGAAATGCA+CGG | 0.757981 | 3.3:+64776523 | MS.gene052607:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAATAAAATACCAATTTT+AGG | - | chr3.3:64775940-64775959 | None:intergenic | 10.0% |
| !!! | TTTTATTATTTTCATTACAT+TGG | + | chr3.3:64775950-64775969 | MS.gene052607:intron | 10.0% |
| !! | AAGATAAATATTTCTTAACT+TGG | + | chr3.3:64774826-64774845 | MS.gene052607:intron | 15.0% |
| !! | ACCAAAAAAAAAAAAATATG+TGG | - | chr3.3:64777028-64777047 | None:intergenic | 15.0% |
| !! | ATAGCAAATAATATTAAATC+AGG | + | chr3.3:64777781-64777800 | MS.gene052607:CDS | 15.0% |
| !! | TGTTAATTATTTCATTACAT+TGG | + | chr3.3:64775137-64775156 | MS.gene052607:intron | 15.0% |
| !! | TTTATCATTATTATTACATG+TGG | + | chr3.3:64777186-64777205 | MS.gene052607:intron | 15.0% |
| !!! | ACTTTATTTATGCTATTAAA+TGG | + | chr3.3:64777392-64777411 | MS.gene052607:intron | 15.0% |
| !!! | TCCACATATTTTTTTTTTTT+TGG | + | chr3.3:64777024-64777043 | MS.gene052607:intron | 15.0% |
| !!! | TTTCGAAAAAATAATTTTCT+TGG | + | chr3.3:64776046-64776065 | MS.gene052607:CDS | 15.0% |
| !!! | TTTGTTTTTTGTTTTGTAAT+GGG | + | chr3.3:64774801-64774820 | MS.gene052607:intron | 15.0% |
| !! | AAACTTGAAGAAAATAAAGA+GGG | + | chr3.3:64776109-64776128 | MS.gene052607:CDS | 20.0% |
| !! | AAATTTATCACTACTCATTT+AGG | + | chr3.3:64777535-64777554 | MS.gene052607:intron | 20.0% |
| !! | AATAATAAAAAACCAACTGT+AGG | - | chr3.3:64774914-64774933 | None:intergenic | 20.0% |
| !! | CAAAGTTATTGTGTAAATTA+TGG | - | chr3.3:64774785-64774804 | None:intergenic | 20.0% |
| !! | TAAATTATCATGATTTCAGA+TGG | + | chr3.3:64776481-64776500 | MS.gene052607:intron | 20.0% |
| !! | TATATATATTTCAGTTTCAG+TGG | + | chr3.3:64776435-64776454 | MS.gene052607:intron | 20.0% |
| !! | TCTTTCTTAATAATAATCTC+TGG | - | chr3.3:64777261-64777280 | None:intergenic | 20.0% |
| !!! | ACTTTGATTTTGTTTTGTAA+AGG | + | chr3.3:64775830-64775849 | MS.gene052607:intron | 20.0% |
| !!! | ATTTTTCTGAAAAAAGAAAG+AGG | + | chr3.3:64774440-64774459 | MS.gene052607:CDS | 20.0% |
| !!! | CTTTGATTTTGTTTTGTAAA+GGG | + | chr3.3:64775831-64775850 | MS.gene052607:intron | 20.0% |
| !!! | CTTTGTTTTTTGTTTTGTAA+TGG | + | chr3.3:64774800-64774819 | MS.gene052607:intron | 20.0% |
| !!! | GATAATTTATTGATTACTTC+AGG | - | chr3.3:64776470-64776489 | None:intergenic | 20.0% |
| ! | AATGAAAATTTGAATGCAAC+AGG | + | chr3.3:64777149-64777168 | MS.gene052607:CDS | 25.0% |
| ! | AATGATAAATTGAATGAACC+AGG | + | chr3.3:64776550-64776569 | MS.gene052607:CDS | 25.0% |
| ! | AGAAACATATAAGAAATACC+TGG | - | chr3.3:64776571-64776590 | None:intergenic | 25.0% |
| ! | ATCATCTCAGTTATAATTTC+AGG | + | chr3.3:64777077-64777096 | MS.gene052607:intron | 25.0% |
| ! | ATTTATCCACATTAGATTAC+TGG | + | chr3.3:64776617-64776636 | MS.gene052607:intron | 25.0% |
| ! | CGTTGGAAAGAAAAAAAAAT+TGG | + | chr3.3:64774719-64774738 | MS.gene052607:CDS | 25.0% |
| ! | GAAACTTGAAGAAAATAAAG+AGG | + | chr3.3:64776108-64776127 | MS.gene052607:CDS | 25.0% |
| ! | TATAACTGAGATGATTACTT+CGG | - | chr3.3:64777072-64777091 | None:intergenic | 25.0% |
| ! | TATGATTTCATGCAAAATGA+AGG | + | chr3.3:64775513-64775532 | MS.gene052607:intron | 25.0% |
| ! | TCATTGCAAATGAACAAATT+GGG | - | chr3.3:64777134-64777153 | None:intergenic | 25.0% |
| ! | TTCATTGCAAATGAACAAAT+TGG | - | chr3.3:64777135-64777154 | None:intergenic | 25.0% |
| ! | TTCTTAATAATAATCTCTGG+CGG | - | chr3.3:64777258-64777277 | None:intergenic | 25.0% |
| !! | ATTCTTGTTCATTTTGTTGA+CGG | + | chr3.3:64775318-64775337 | MS.gene052607:intron | 25.0% |
| !! | CATTTTGCATGAAATCATAA+TGG | - | chr3.3:64775512-64775531 | None:intergenic | 25.0% |
| !! | GAAAAACAAAATAAAGTGCT+GGG | - | chr3.3:64777469-64777488 | None:intergenic | 25.0% |
| !! | GTTTTGCATATTGATATTTG+TGG | + | chr3.3:64776922-64776941 | MS.gene052607:intron | 25.0% |
| !! | TGTTCTTTTTGTTAATGACT+CGG | + | chr3.3:64776214-64776233 | MS.gene052607:intron | 25.0% |
| !! | TTGTAATTTTAAATGACCTG+TGG | + | chr3.3:64777558-64777577 | MS.gene052607:intron | 25.0% |
| !!! | AATGGTTTTACCTTATAAAC+TGG | + | chr3.3:64777410-64777429 | MS.gene052607:intron | 25.0% |
| !!! | AATTTGTTATGATTTCCTAC+AGG | + | chr3.3:64776309-64776328 | MS.gene052607:intron | 25.0% |
| !!! | ACATTTCATTGCTCATTTTT+AGG | + | chr3.3:64774935-64774954 | MS.gene052607:intron | 25.0% |
| !!! | ATGGTTTTACCTTATAAACT+GGG | + | chr3.3:64777411-64777430 | MS.gene052607:intron | 25.0% |
| !!! | ATTTGTTATGATTTCCTACA+GGG | + | chr3.3:64776310-64776329 | MS.gene052607:intron | 25.0% |
| !!! | ATTTTAGCATTCAATCAAGA+TGG | - | chr3.3:64777519-64777538 | None:intergenic | 25.0% |
| !!! | ATTTTGGGAATCATTTTCAT+AGG | - | chr3.3:64775544-64775563 | None:intergenic | 25.0% |
| AAATTGGGAGTAATTTCCAT+TGG | - | chr3.3:64777119-64777138 | None:intergenic | 30.0% | |
| AACAGATCGATTATTTCCAA+TGG | + | chr3.3:64775747-64775766 | MS.gene052607:CDS | 30.0% | |
| AACTCTCCCTTAATAACATT+TGG | - | chr3.3:64776688-64776707 | None:intergenic | 30.0% | |
| AATTATGGTACCAAAACTCT+CGG | - | chr3.3:64774770-64774789 | None:intergenic | 30.0% | |
| AATTTCATTGAACCTCTGTT+TGG | - | chr3.3:64776959-64776978 | None:intergenic | 30.0% | |
| AATTTCCTCTTTGAACATGA+TGG | - | chr3.3:64776140-64776159 | None:intergenic | 30.0% | |
| ACATTAACATGTTTGATTGC+AGG | + | chr3.3:64777231-64777250 | MS.gene052607:intron | 30.0% | |
| ACTTGGTTGTTTATACTTGT+AGG | + | chr3.3:64774843-64774862 | MS.gene052607:intron | 30.0% | |
| AGAATCCATTATGTCCAATA+AGG | + | chr3.3:64775039-64775058 | MS.gene052607:CDS | 30.0% | |
| AGAATCCGATAATATAACTG+CGG | - | chr3.3:64775651-64775670 | None:intergenic | 30.0% | |
| ATAACTGAGATGATTACTTC+GGG | - | chr3.3:64777071-64777090 | None:intergenic | 30.0% | |
| ATCTGAGTCATGATTTACTT+TGG | - | chr3.3:64776008-64776027 | None:intergenic | 30.0% | |
| ATGATAAGTCTATGTGTGAA+AGG | + | chr3.3:64774413-64774432 | MS.gene052607:CDS | 30.0% | |
| ATGCATCATTTAGATCTACA+TGG | - | chr3.3:64774630-64774649 | None:intergenic | 30.0% | |
| ATTACTTCAAGAGAATCAAG+TGG | - | chr3.3:64775482-64775501 | None:intergenic | 30.0% | |
| ATTTCAGAAGTCATGTTCAT+AGG | - | chr3.3:64776520-64776539 | None:intergenic | 30.0% | |
| CAACTTATCATTTGATCAGA+TGG | - | chr3.3:64776895-64776914 | None:intergenic | 30.0% | |
| CAATGAGATGACAAATGATA+TGG | + | chr3.3:64776353-64776372 | MS.gene052607:CDS | 30.0% | |
| CAATGTGAATTTGAGGATTT+AGG | - | chr3.3:64775433-64775452 | None:intergenic | 30.0% | |
| CATTAACATGTTTGATTGCA+GGG | + | chr3.3:64777232-64777251 | MS.gene052607:intron | 30.0% | |
| CCAAAGCCAAATGTTATTAA+GGG | + | chr3.3:64776679-64776698 | MS.gene052607:CDS | 30.0% | |
| CTAAATCCTCAAATTCACAT+TGG | + | chr3.3:64775431-64775450 | MS.gene052607:CDS | 30.0% | |
| CTTGGTTGTTTATACTTGTA+GGG | + | chr3.3:64774844-64774863 | MS.gene052607:intron | 30.0% | |
| GACAAGCTTTCAAAATAGAA+AGG | - | chr3.3:64777491-64777510 | None:intergenic | 30.0% | |
| GGAAAAACAAAATAAAGTGC+TGG | - | chr3.3:64777470-64777489 | None:intergenic | 30.0% | |
| GTGTGAAGATTTCCTAAAAT+TGG | + | chr3.3:64775925-64775944 | MS.gene052607:intron | 30.0% | |
| TATATAACACAAGCGCATAT+AGG | - | chr3.3:64777355-64777374 | None:intergenic | 30.0% | |
| TGAAAAGAAGAAAATGCCAA+TGG | + | chr3.3:64777100-64777119 | MS.gene052607:CDS | 30.0% | |
| TGATAAGTCTATGTGTGAAA+GGG | + | chr3.3:64774414-64774433 | MS.gene052607:CDS | 30.0% | |
| TTGTGAGGCAAAATCAAATA+GGG | - | chr3.3:64776796-64776815 | None:intergenic | 30.0% | |
| TTGTTTCAGCCACTAATATA+GGG | + | chr3.3:64776258-64776277 | MS.gene052607:intron | 30.0% | |
| TTTGTGAGGCAAAATCAAAT+AGG | - | chr3.3:64776797-64776816 | None:intergenic | 30.0% | |
| TTTGTTTCAGCCACTAATAT+AGG | + | chr3.3:64776257-64776276 | MS.gene052607:intron | 30.0% | |
| ! | AAGATGGTAATGTAGATAGA+AGG | + | chr3.3:64774560-64774579 | MS.gene052607:CDS | 30.0% |
| ! | AGATGGTAATGTAGATAGAA+GGG | + | chr3.3:64774561-64774580 | MS.gene052607:CDS | 30.0% |
| ! | ATCATTGAAGCTGTCAATTT+TGG | - | chr3.3:64775560-64775579 | None:intergenic | 30.0% |
| ! | CTTCTTGTTCATTTTGTTGA+CGG | + | chr3.3:64775104-64775123 | MS.gene052607:intron | 30.0% |
| ! | GCTTGAAAAAGGATATTTTC+TGG | + | chr3.3:64774348-64774367 | MS.gene052607:CDS | 30.0% |
| ! | TCATTGAAGCTGTCAATTTT+GGG | - | chr3.3:64775559-64775578 | None:intergenic | 30.0% |
| ! | TTTGTTATGATTTCCTACAG+GGG | + | chr3.3:64776311-64776330 | MS.gene052607:intron | 30.0% |
| !! | TGATGGTTCTTTTGCTTTTA+AGG | + | chr3.3:64774294-64774313 | MS.gene052607:CDS | 30.0% |
| !! | TTTTGCTTTTAAGGAAGGAT+GGG | + | chr3.3:64774303-64774322 | MS.gene052607:CDS | 30.0% |
| !!! | CATTACATTGGCTCATTTTT+AGG | + | chr3.3:64775149-64775168 | MS.gene052607:intron | 30.0% |
| !!! | TCATTACATTGGCTCATTTT+AGG | + | chr3.3:64775148-64775167 | MS.gene052607:intron | 30.0% |
| AAATCCTACCATGTCATTGT+TGG | + | chr3.3:64774201-64774220 | MS.gene052607:CDS | 35.0% | |
| ACCTTATAAACTGGGATTGT+AGG | + | chr3.3:64777419-64777438 | MS.gene052607:intron | 35.0% | |
| ACTTTGATCATCTGAGAGAT+TGG | - | chr3.3:64776983-64777002 | None:intergenic | 35.0% | |
| ATAATATAACTGCGGACCAA+TGG | - | chr3.3:64775643-64775662 | None:intergenic | 35.0% | |
| ATTATGAATGAACACCTCAC+AGG | - | chr3.3:64776755-64776774 | None:intergenic | 35.0% | |
| CAGAATCCAGTAATCTAATG+TGG | - | chr3.3:64776626-64776645 | None:intergenic | 35.0% | |
| CAGATCCTTATTGGACATAA+TGG | - | chr3.3:64775261-64775280 | None:intergenic | 35.0% | |
| CCTGATCACTTCCTAAAAAT+GGG | - | chr3.3:64775976-64775995 | None:intergenic | 35.0% | |
| GAAACAACTTCTACGCTATT+TGG | - | chr3.3:64774538-64774557 | None:intergenic | 35.0% | |
| GCAAGTTCAAATGGTCAAAA+CGG | - | chr3.3:64777606-64777625 | None:intergenic | 35.0% | |
| GCCAAAGCCAAATGTTATTA+AGG | + | chr3.3:64776678-64776697 | MS.gene052607:CDS | 35.0% | |
| GTAACAGTATCAAAAGCTGA+TGG | + | chr3.3:64774277-64774296 | MS.gene052607:CDS | 35.0% | |
| GTTTATACTTGTAGGGTTTC+AGG | + | chr3.3:64774851-64774870 | MS.gene052607:intron | 35.0% | |
| TATTTCCAATGGAGAAGTTC+AGG | + | chr3.3:64775758-64775777 | MS.gene052607:CDS | 35.0% | |
| TCAGATGATCAAAGTCACAT+TGG | + | chr3.3:64776988-64777007 | MS.gene052607:CDS | 35.0% | |
| TCCTACAATCCCAGTTTATA+AGG | - | chr3.3:64777423-64777442 | None:intergenic | 35.0% | |
| TGGTAAGAAAATCTATCTCG+AGG | + | chr3.3:64774225-64774244 | MS.gene052607:CDS | 35.0% | |
| TTCAAACACTTGTAGAGCTT+CGG | + | chr3.3:64775884-64775903 | MS.gene052607:intron | 35.0% | |
| TTCAGCAAACAGATCCTTAT+TGG | - | chr3.3:64775270-64775289 | None:intergenic | 35.0% | |
| TTGGTCCGCAGTTATATTAT+CGG | + | chr3.3:64775643-64775662 | MS.gene052607:intron | 35.0% | |
| TTTCTCACTGTCATTGTTTG+TGG | + | chr3.3:64776586-64776605 | MS.gene052607:intron | 35.0% | |
| ! | AATAAGGATCTGTTTGCTGA+AGG | + | chr3.3:64775269-64775288 | MS.gene052607:CDS | 35.0% |
| ! | ATGGTAGGATTTAACTTAGG+AGG | - | chr3.3:64774193-64774212 | None:intergenic | 35.0% |
| ! | CCCTTAATAACATTTGGCTT+TGG | - | chr3.3:64776682-64776701 | None:intergenic | 35.0% |
| ! | CGGATTAATTTTGTGCAACT+TGG | + | chr3.3:64776234-64776253 | MS.gene052607:intron | 35.0% |
| ! | GAATTTGTTCAATTGCAGAG+CGG | + | chr3.3:64775682-64775701 | MS.gene052607:intron | 35.0% |
| ! | GACATGGTAGGATTTAACTT+AGG | - | chr3.3:64774196-64774215 | None:intergenic | 35.0% |
| ! | GTAGAAGTTGTTTCAGAAGA+TGG | + | chr3.3:64774544-64774563 | MS.gene052607:CDS | 35.0% |
| ! | TACCAAAAACCTAGTTTGTG+AGG | - | chr3.3:64776811-64776830 | None:intergenic | 35.0% |
| ! | TCCTATGTTTGAAGAAGTGT+TGG | + | chr3.3:64774666-64774685 | MS.gene052607:CDS | 35.0% |
| ! | TTGATTTTGCCTCACAAACT+AGG | + | chr3.3:64776799-64776818 | MS.gene052607:intron | 35.0% |
| ! | TTGTCAACGAAGTTTGTTCA+AGG | - | chr3.3:64777741-64777760 | None:intergenic | 35.0% |
| !! | AACATGACTTCTGAAATGCA+CGG | + | chr3.3:64776523-64776542 | MS.gene052607:CDS | 35.0% |
| !! | ATTTTTAGGAAGTGATCAGG+CGG | + | chr3.3:64775976-64775995 | MS.gene052607:intron | 35.0% |
| !! | CATTACATTGGCCCATTTTT+AGG | + | chr3.3:64775962-64775981 | MS.gene052607:intron | 35.0% |
| !! | CCTATGTTTGAAGAAGTGTT+GGG | + | chr3.3:64774667-64774686 | MS.gene052607:CDS | 35.0% |
| !! | CTTTTGCTTTTAAGGAAGGA+TGG | + | chr3.3:64774302-64774321 | MS.gene052607:CDS | 35.0% |
| !! | GGTTCTTTTGCTTTTAAGGA+AGG | + | chr3.3:64774298-64774317 | MS.gene052607:CDS | 35.0% |
| !!! | GGTTTTTGGTAGCAAGATTA+TGG | + | chr3.3:64776820-64776839 | MS.gene052607:intron | 35.0% |
| AAACTTCGTTGACAAGTGGA+TGG | + | chr3.3:64777746-64777765 | MS.gene052607:CDS | 40.0% | |
| ATAGAAGAATGAGCAACCAC+AGG | - | chr3.3:64777577-64777596 | None:intergenic | 40.0% | |
| ATTACGTTCAAAGAGGATGG+TGG | + | chr3.3:64777672-64777691 | MS.gene052607:CDS | 40.0% | |
| ATTATCGGATTCTGTCTCAC+AGG | + | chr3.3:64775658-64775677 | MS.gene052607:intron | 40.0% | |
| CAGATCCATCATGTTCAAAG+AGG | + | chr3.3:64776132-64776151 | MS.gene052607:CDS | 40.0% | |
| CAGGTCCTTATTGGACATAA+TGG | - | chr3.3:64775047-64775066 | None:intergenic | 40.0% | |
| CCCAACACTTCTTCAAACAT+AGG | - | chr3.3:64774670-64774689 | None:intergenic | 40.0% | |
| CTCATACGCTTCTAAATCGT+TGG | + | chr3.3:64774702-64774721 | MS.gene052607:CDS | 40.0% | |
| CTTACCAACCAACAATGACA+TGG | - | chr3.3:64774212-64774231 | None:intergenic | 40.0% | |
| GAACAAACTTCGTTGACAAG+TGG | + | chr3.3:64777742-64777761 | MS.gene052607:CDS | 40.0% | |
| GAGGCAAAATCAAATAGGGA+CGG | - | chr3.3:64776792-64776811 | None:intergenic | 40.0% | |
| GATCAAGCAGCGAAATTCAA+AGG | + | chr3.3:64774962-64774981 | MS.gene052607:CDS | 40.0% | |
| GATCAAGCAGCGATATTCAA+AGG | + | chr3.3:64775176-64775195 | MS.gene052607:CDS | 40.0% | |
| GATTACTGGATTCTGTCTCA+CGG | + | chr3.3:64776631-64776650 | MS.gene052607:intron | 40.0% | |
| GCATGTGAACTTGAAACTTC+TGG | + | chr3.3:64775001-64775020 | MS.gene052607:CDS | 40.0% | |
| GCCTGATCACTTCCTAAAAA+TGG | - | chr3.3:64775977-64775996 | None:intergenic | 40.0% | |
| GTGTGATGATTTCCTACAGT+TGG | + | chr3.3:64774899-64774918 | MS.gene052607:intron | 40.0% | |
| TCAAACACTTGTAGAGCTTC+GGG | + | chr3.3:64775885-64775904 | MS.gene052607:intron | 40.0% | |
| TGGATTACGTTCAAAGAGGA+TGG | + | chr3.3:64777669-64777688 | MS.gene052607:CDS | 40.0% | |
| TTCAGCAAACAGGTCCTTAT+TGG | - | chr3.3:64775056-64775075 | None:intergenic | 40.0% | |
| TTGTAGGGTTTCAGGCATTA+TGG | + | chr3.3:64774859-64774878 | MS.gene052607:intron | 40.0% | |
| TTTCTCGCTACCATTGTTTG+TGG | + | chr3.3:64775611-64775630 | MS.gene052607:intron | 40.0% | |
| ! | AACTTCTGGAAGAAGCAAAG+AGG | + | chr3.3:64775015-64775034 | MS.gene052607:CDS | 40.0% |
| ! | AATAAGGACCTGTTTGCTGA+AGG | + | chr3.3:64775055-64775074 | MS.gene052607:CDS | 40.0% |
| ! | ACGAAGTTTGTTCAAGGCAA+AGG | - | chr3.3:64777735-64777754 | None:intergenic | 40.0% |
| ! | ACTTCTGGAAGAAGCAAAGA+GGG | + | chr3.3:64775016-64775035 | MS.gene052607:CDS | 40.0% |
| ! | AGGATGGGATGTTTTCTCAT+CGG | + | chr3.3:64774318-64774337 | MS.gene052607:CDS | 40.0% |
| ! | CAACGATTTAGAAGCGTATG+AGG | - | chr3.3:64774704-64774723 | None:intergenic | 40.0% |
| ! | GTTTTCAGAACACCAAACAG+AGG | + | chr3.3:64776944-64776963 | MS.gene052607:intron | 40.0% |
| ! | TGCCTCACAAACTAGGTTTT+TGG | + | chr3.3:64776806-64776825 | MS.gene052607:intron | 40.0% |
| !! | CCCATTTTTAGGAAGTGATC+AGG | + | chr3.3:64775973-64775992 | MS.gene052607:intron | 40.0% |
| !! | GCTCATTTTAGGAAGTGATC+CGG | + | chr3.3:64775373-64775392 | MS.gene052607:intron | 40.0% |
| AAACTGGGATTGTAGGAGCA+GGG | + | chr3.3:64777426-64777445 | MS.gene052607:intron | 45.0% | |
| AACCTCAACCGGTAAGAGAT+GGG | + | chr3.3:64774252-64774271 | MS.gene052607:CDS | 45.0% | |
| AACTCCCCCTTAACAACCTT+TGG | - | chr3.3:64775708-64775727 | None:intergenic | 45.0% | |
| AAGAGAAGTAGATGCAGCAG+TGG | + | chr3.3:64774466-64774485 | MS.gene052607:CDS | 45.0% | |
| ACATCAACCCCCATATGCAT+TGG | - | chr3.3:64774505-64774524 | None:intergenic | 45.0% | |
| ACTTGACGTGCCAATGCATA+TGG | + | chr3.3:64774492-64774511 | MS.gene052607:CDS | 45.0% | |
| AGATGAAACTGTGAGCTCTG+TGG | + | chr3.3:64777290-64777309 | MS.gene052607:CDS | 45.0% | |
| AGCCACTAATATAGGGCTCT+AGG | + | chr3.3:64776265-64776284 | MS.gene052607:intron | 45.0% | |
| AGCCTAGAGCCCTATATTAG+TGG | - | chr3.3:64776270-64776289 | None:intergenic | 45.0% | |
| ATGGATGCACGAATGCACAT+TGG | + | chr3.3:64776372-64776391 | MS.gene052607:CDS | 45.0% | |
| ATGGATGCAGCCACAAACAA+TGG | - | chr3.3:64775624-64775643 | None:intergenic | 45.0% | |
| CCAACCAACAATGACATGGT+AGG | - | chr3.3:64774208-64774227 | None:intergenic | 45.0% | |
| CCTACCATGTCATTGTTGGT+TGG | + | chr3.3:64774205-64774224 | MS.gene052607:CDS | 45.0% | |
| CTTGACGTGCCAATGCATAT+GGG | + | chr3.3:64774493-64774512 | MS.gene052607:CDS | 45.0% | |
| GACGCACCAATGTGAATTTG+AGG | - | chr3.3:64775440-64775459 | None:intergenic | 45.0% | |
| GATTGTAGGAGCAGGGTTTA+TGG | + | chr3.3:64777433-64777452 | MS.gene052607:intron | 45.0% | |
| GCAGTACGTGCAAGTTCAAA+TGG | - | chr3.3:64777615-64777634 | None:intergenic | 45.0% | |
| GGTGATACTTAAGGATGCAC+TGG | + | chr3.3:64777693-64777712 | MS.gene052607:CDS | 45.0% | |
| GTTTGTTCAAGGCAAAGGAC+CGG | - | chr3.3:64777730-64777749 | None:intergenic | 45.0% | |
| TAAACTGGGATTGTAGGAGC+AGG | + | chr3.3:64777425-64777444 | MS.gene052607:intron | 45.0% | |
| TACCAAAACTCTCGGTGACT+TGG | - | chr3.3:64774762-64774781 | None:intergenic | 45.0% | |
| TACCGAAGCCTTCAGAAAAC+TGG | - | chr3.3:64776171-64776190 | None:intergenic | 45.0% | |
| TACCTAAGCCTTCAGCAAAC+AGG | - | chr3.3:64775066-64775085 | None:intergenic | 45.0% | |
| TCGGCTCACAAGCTTGAAAA+AGG | + | chr3.3:64774337-64774356 | MS.gene052607:CDS | 45.0% | |
| TGTTACAGCCCATCTCTTAC+CGG | - | chr3.3:64774263-64774282 | None:intergenic | 45.0% | |
| TTGACGTGCCAATGCATATG+GGG | + | chr3.3:64774494-64774513 | MS.gene052607:CDS | 45.0% | |
| TTGTTTGTGGCTGCATCCAT+TGG | + | chr3.3:64775624-64775643 | MS.gene052607:intron | 45.0% | |
| ! | AAGAGAATCAAGTGGCTCTG+TGG | - | chr3.3:64775474-64775493 | None:intergenic | 45.0% |
| ! | AGGTGATGCGTGTGATTTTC+GGG | + | chr3.3:64777801-64777820 | MS.gene052607:CDS | 45.0% |
| ! | CAGGTGATGCGTGTGATTTT+CGG | + | chr3.3:64777800-64777819 | MS.gene052607:CDS | 45.0% |
| ! | GAGGATGGTGGTGATACTTA+AGG | + | chr3.3:64777684-64777703 | MS.gene052607:CDS | 45.0% |
| ! | GATCTGTTTGCTGAAGGCTT+AGG | + | chr3.3:64775275-64775294 | MS.gene052607:CDS | 45.0% |
| ! | GTCACATTGGTGCGTCTTTT+TGG | + | chr3.3:64777001-64777020 | MS.gene052607:intron | 45.0% |
| !! | ATATAGGGCTCTAGGCTTCT+TGG | + | chr3.3:64776273-64776292 | MS.gene052607:intron | 45.0% |
| !! | ATGCATATGGGGGTTGATGT+AGG | + | chr3.3:64774505-64774524 | MS.gene052607:CDS | 45.0% |
| !! | CATTTTAGGAAGTGATCCGG+CGG | + | chr3.3:64775376-64775395 | MS.gene052607:intron | 45.0% |
| !! | TGCCAGTTTTCTGAAGGCTT+CGG | + | chr3.3:64776166-64776185 | MS.gene052607:CDS | 45.0% |
| !! | TTGAAGAAGTGTTGGGCTCA+GGG | + | chr3.3:64774674-64774693 | MS.gene052607:CDS | 45.0% |
| !! | TTTGAAGAAGTGTTGGGCTC+AGG | + | chr3.3:64774673-64774692 | MS.gene052607:CDS | 45.0% |
| !!! | CAAGAGTGCCAGTTTTCTGA+AGG | + | chr3.3:64776160-64776179 | MS.gene052607:CDS | 45.0% |
| AGAGCGGCCAAAGGTTGTTA+AGG | + | chr3.3:64775698-64775717 | MS.gene052607:intron | 50.0% | |
| AGCGGCCAAAGGTTGTTAAG+GGG | + | chr3.3:64775700-64775719 | MS.gene052607:CDS | 50.0% | |
| AGGATGCACTGGAGAGATTG+TGG | + | chr3.3:64777704-64777723 | MS.gene052607:CDS | 50.0% | |
| CAACCTCAACCGGTAAGAGA+TGG | + | chr3.3:64774251-64774270 | MS.gene052607:CDS | 50.0% | |
| CTCGAGGATTCAACCTCAAC+CGG | + | chr3.3:64774241-64774260 | MS.gene052607:CDS | 50.0% | |
| GAACACCTCACAGGAGATAG+TGG | - | chr3.3:64776746-64776765 | None:intergenic | 50.0% | |
| GAGCGGCCAAAGGTTGTTAA+GGG | + | chr3.3:64775699-64775718 | MS.gene052607:intron | 50.0% | |
| GCACTCCTGAACTTCTCCAT+TGG | - | chr3.3:64775766-64775785 | None:intergenic | 50.0% | |
| GCGCTGGATTACGTTCAAAG+AGG | + | chr3.3:64777665-64777684 | MS.gene052607:CDS | 50.0% | |
| TACCTAAGCTCATCGCAACC+TGG | - | chr3.3:64775788-64775807 | None:intergenic | 50.0% | |
| TCTTCAGATATCGCCCCTGT+AGG | - | chr3.3:64776327-64776346 | None:intergenic | 50.0% | |
| TGACGTGCCAATGCATATGG+GGG | + | chr3.3:64774495-64774514 | MS.gene052607:CDS | 50.0% | |
| TGCACGAATGCACATTGGTG+AGG | + | chr3.3:64776377-64776396 | MS.gene052607:intron | 50.0% | |
| TTCAATTGCAGAGCGGCCAA+AGG | + | chr3.3:64775689-64775708 | MS.gene052607:intron | 50.0% | |
| ! | AGCCAAGTCACCGAGAGTTT+TGG | + | chr3.3:64774757-64774776 | MS.gene052607:CDS | 50.0% |
| ! | GACCTGTTTGCTGAAGGCTT+AGG | + | chr3.3:64775061-64775080 | MS.gene052607:CDS | 50.0% |
| !! | CATATGGGGGTTGATGTAGG+TGG | + | chr3.3:64774508-64774527 | MS.gene052607:CDS | 50.0% |
| !! | TGAAGAAGTGTTGGGCTCAG+GGG | + | chr3.3:64774675-64774694 | MS.gene052607:CDS | 50.0% |
| !!! | TGCGTGTGATTTTCGGGTTG+AGG | + | chr3.3:64777807-64777826 | MS.gene052607:CDS | 50.0% |
| CGTAATCCAGCGCGAGATAG+TGG | - | chr3.3:64777658-64777677 | None:intergenic | 55.0% | |
| GCGGCCAAAGGTTGTTAAGG+GGG | + | chr3.3:64775701-64775720 | MS.gene052607:CDS | 55.0% | |
| TGCACTGGAGAGATTGTGGC+CGG | + | chr3.3:64777708-64777727 | MS.gene052607:CDS | 55.0% | |
| TGCAGCCACTATCTCCTGTG+AGG | + | chr3.3:64776738-64776757 | MS.gene052607:CDS | 55.0% | |
| TGCCAGGTTGCGATGAGCTT+AGG | + | chr3.3:64775783-64775802 | MS.gene052607:CDS | 55.0% | |
| ! | AGCCCATCTCTTACCGGTTG+AGG | - | chr3.3:64774257-64774276 | None:intergenic | 55.0% |
| !! | TGGAGAAGTTCAGGAGTGCC+AGG | + | chr3.3:64775767-64775786 | MS.gene052607:CDS | 55.0% |
| TGCTTGCCACTATCTCGCGC+TGG | + | chr3.3:64777649-64777668 | MS.gene052607:CDS | 60.0% | |
| TTGCACCTCTCTTCAGCCGC+CGG | - | chr3.3:64775395-64775414 | None:intergenic | 60.0% | |
| GTGATCCGGCGGCTGAAGAG+AGG | + | chr3.3:64775387-64775406 | MS.gene052607:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 64774184 | 64777873 | 64774184 | ID=MS.gene052607 |
| chr3.3 | mRNA | 64774184 | 64777873 | 64774184 | ID=MS.gene052607.t1;Parent=MS.gene052607 |
| chr3.3 | exon | 64774184 | 64774778 | 64774184 | ID=MS.gene052607.t1.exon1;Parent=MS.gene052607.t1 |
| chr3.3 | CDS | 64774184 | 64774778 | 64774184 | ID=cds.MS.gene052607.t1;Parent=MS.gene052607.t1 |
| chr3.3 | exon | 64774957 | 64775082 | 64774957 | ID=MS.gene052607.t1.exon2;Parent=MS.gene052607.t1 |
| chr3.3 | CDS | 64774957 | 64775082 | 64774957 | ID=cds.MS.gene052607.t1;Parent=MS.gene052607.t1 |
| chr3.3 | exon | 64775171 | 64775296 | 64775171 | ID=MS.gene052607.t1.exon3;Parent=MS.gene052607.t1 |
| chr3.3 | CDS | 64775171 | 64775296 | 64775171 | ID=cds.MS.gene052607.t1;Parent=MS.gene052607.t1 |
| chr3.3 | exon | 64775384 | 64775452 | 64775384 | ID=MS.gene052607.t1.exon4;Parent=MS.gene052607.t1 |
| chr3.3 | CDS | 64775384 | 64775452 | 64775384 | ID=cds.MS.gene052607.t1;Parent=MS.gene052607.t1 |
| chr3.3 | exon | 64775700 | 64775804 | 64775700 | ID=MS.gene052607.t1.exon5;Parent=MS.gene052607.t1 |
| chr3.3 | CDS | 64775700 | 64775804 | 64775700 | ID=cds.MS.gene052607.t1;Parent=MS.gene052607.t1 |
| chr3.3 | exon | 64775984 | 64776187 | 64775984 | ID=MS.gene052607.t1.exon6;Parent=MS.gene052607.t1 |
| chr3.3 | CDS | 64775984 | 64776187 | 64775984 | ID=cds.MS.gene052607.t1;Parent=MS.gene052607.t1 |
| chr3.3 | exon | 64776331 | 64776393 | 64776331 | ID=MS.gene052607.t1.exon7;Parent=MS.gene052607.t1 |
| chr3.3 | CDS | 64776331 | 64776393 | 64776331 | ID=cds.MS.gene052607.t1;Parent=MS.gene052607.t1 |
| chr3.3 | exon | 64776500 | 64776571 | 64776500 | ID=MS.gene052607.t1.exon8;Parent=MS.gene052607.t1 |
| chr3.3 | CDS | 64776500 | 64776571 | 64776500 | ID=cds.MS.gene052607.t1;Parent=MS.gene052607.t1 |
| chr3.3 | exon | 64776674 | 64776759 | 64776674 | ID=MS.gene052607.t1.exon9;Parent=MS.gene052607.t1 |
| chr3.3 | CDS | 64776674 | 64776759 | 64776674 | ID=cds.MS.gene052607.t1;Parent=MS.gene052607.t1 |
| chr3.3 | exon | 64776952 | 64777009 | 64776952 | ID=MS.gene052607.t1.exon10;Parent=MS.gene052607.t1 |
| chr3.3 | CDS | 64776952 | 64777009 | 64776952 | ID=cds.MS.gene052607.t1;Parent=MS.gene052607.t1 |
| chr3.3 | exon | 64777099 | 64777170 | 64777099 | ID=MS.gene052607.t1.exon11;Parent=MS.gene052607.t1 |
| chr3.3 | CDS | 64777099 | 64777170 | 64777099 | ID=cds.MS.gene052607.t1;Parent=MS.gene052607.t1 |
| chr3.3 | exon | 64777253 | 64777335 | 64777253 | ID=MS.gene052607.t1.exon12;Parent=MS.gene052607.t1 |
| chr3.3 | CDS | 64777253 | 64777335 | 64777253 | ID=cds.MS.gene052607.t1;Parent=MS.gene052607.t1 |
| chr3.3 | exon | 64777637 | 64777873 | 64777637 | ID=MS.gene052607.t1.exon13;Parent=MS.gene052607.t1 |
| chr3.3 | CDS | 64777637 | 64777873 | 64777637 | ID=cds.MS.gene052607.t1;Parent=MS.gene052607.t1 |
| Gene Sequence |
| Protein sequence |
