Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052727.t1 | XP_003627170.1 | 76.5 | 293 | 54 | 3 | 2 | 294 | 9 | 286 | 3.10E-99 | 371.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052727.t1 | F4I7L1 | 39.3 | 305 | 146 | 7 | 2 | 289 | 9 | 291 | 1.1e-44 | 181.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052727.t1 | G7LI96 | 76.5 | 293 | 54 | 3 | 2 | 294 | 9 | 286 | 2.3e-99 | 371.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene052727.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052727 | MS.gene07827 | 0.984968 | 3.95E-162 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052727.t1 | MTR_8g018410 | 83.618 | 293 | 33 | 3 | 2 | 294 | 9 | 286 | 2.19e-169 | 471 |
| MS.gene052727.t1 | MTR_2g099610 | 46.580 | 307 | 136 | 8 | 2 | 293 | 9 | 302 | 1.92e-76 | 235 |
| MS.gene052727.t1 | MTR_8g494240 | 37.561 | 205 | 112 | 4 | 2 | 205 | 9 | 198 | 1.28e-32 | 122 |
| MS.gene052727.t1 | MTR_8g494240 | 37.561 | 205 | 112 | 4 | 2 | 205 | 9 | 198 | 1.45e-32 | 122 |
| MS.gene052727.t1 | MTR_8g494240 | 37.561 | 205 | 112 | 4 | 2 | 205 | 9 | 198 | 6.98e-32 | 122 |
| MS.gene052727.t1 | MTR_4g097130 | 37.879 | 198 | 107 | 5 | 2 | 186 | 9 | 203 | 1.86e-31 | 119 |
| MS.gene052727.t1 | MTR_4g097130 | 37.949 | 195 | 106 | 5 | 2 | 186 | 9 | 198 | 2.07e-31 | 119 |
| MS.gene052727.t1 | MTR_4g097130 | 37.949 | 195 | 106 | 5 | 2 | 186 | 9 | 198 | 2.18e-31 | 119 |
| MS.gene052727.t1 | MTR_5g015340 | 36.898 | 187 | 104 | 4 | 2 | 186 | 9 | 183 | 3.17e-30 | 115 |
| MS.gene052727.t1 | MTR_5g015340 | 36.898 | 187 | 104 | 4 | 2 | 186 | 9 | 183 | 3.17e-30 | 115 |
| MS.gene052727.t1 | MTR_2g031870 | 36.715 | 207 | 117 | 5 | 2 | 208 | 9 | 201 | 6.69e-30 | 115 |
| MS.gene052727.t1 | MTR_5g015340 | 36.898 | 187 | 104 | 4 | 2 | 186 | 9 | 183 | 4.84e-29 | 114 |
| MS.gene052727.t1 | MTR_8g092810 | 35.938 | 192 | 103 | 4 | 2 | 186 | 9 | 187 | 1.30e-24 | 103 |
| MS.gene052727.t1 | MTR_0095s0040 | 38.217 | 157 | 81 | 4 | 2 | 152 | 9 | 155 | 6.80e-22 | 92.4 |
| MS.gene052727.t1 | MTR_1g041765 | 54.545 | 55 | 25 | 0 | 2 | 56 | 9 | 63 | 3.38e-15 | 73.2 |
| MS.gene052727.t1 | MTR_2g031870 | 30.811 | 185 | 96 | 5 | 2 | 186 | 9 | 161 | 4.34e-13 | 68.2 |
| MS.gene052727.t1 | MTR_7g096280 | 43.939 | 66 | 36 | 1 | 122 | 186 | 63 | 128 | 3.06e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052727.t1 | AT1G72740 | 41.924 | 291 | 147 | 5 | 2 | 291 | 9 | 278 | 6.61e-63 | 200 |
| MS.gene052727.t1 | AT1G72740 | 41.077 | 297 | 147 | 6 | 2 | 291 | 9 | 284 | 1.88e-60 | 194 |
| MS.gene052727.t1 | AT1G17520 | 39.873 | 316 | 127 | 8 | 2 | 291 | 9 | 287 | 7.65e-58 | 187 |
| MS.gene052727.t1 | AT1G17520 | 40.063 | 317 | 126 | 9 | 2 | 291 | 9 | 288 | 2.12e-56 | 184 |
| MS.gene052727.t1 | AT1G17520 | 39.130 | 322 | 127 | 9 | 2 | 291 | 9 | 293 | 2.31e-55 | 181 |
| MS.gene052727.t1 | AT1G17520 | 39.319 | 323 | 126 | 10 | 2 | 291 | 9 | 294 | 7.66e-54 | 177 |
| MS.gene052727.t1 | AT1G49950 | 36.364 | 187 | 105 | 4 | 2 | 186 | 9 | 183 | 9.77e-28 | 109 |
| MS.gene052727.t1 | AT1G49950 | 36.364 | 187 | 105 | 4 | 2 | 186 | 9 | 183 | 9.77e-28 | 109 |
| MS.gene052727.t1 | AT1G49950 | 36.364 | 187 | 105 | 4 | 2 | 186 | 9 | 183 | 9.77e-28 | 109 |
| MS.gene052727.t1 | AT3G49850 | 32.990 | 194 | 108 | 4 | 2 | 188 | 9 | 187 | 5.61e-24 | 99.0 |
| MS.gene052727.t1 | AT3G49850 | 32.990 | 194 | 108 | 4 | 2 | 188 | 9 | 187 | 5.61e-24 | 99.0 |
| MS.gene052727.t1 | AT1G54260 | 33.161 | 193 | 109 | 3 | 119 | 291 | 2 | 194 | 6.10e-23 | 94.0 |
| MS.gene052727.t1 | AT5G67580 | 32.086 | 187 | 117 | 3 | 2 | 186 | 9 | 187 | 1.26e-21 | 92.8 |
| MS.gene052727.t1 | AT5G67580 | 32.086 | 187 | 117 | 3 | 2 | 186 | 9 | 187 | 1.26e-21 | 92.8 |
| MS.gene052727.t1 | AT1G54240 | 28.736 | 174 | 113 | 5 | 125 | 291 | 57 | 226 | 1.77e-11 | 63.2 |
Find 55 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGCTCTGACTACATTAA+AGG | 0.241020 | 8.3:+72182078 | MS.gene052727:CDS |
| AAAGACATGGCCCTGGTAAA+TGG | 0.273347 | 8.3:+72180152 | MS.gene052727:CDS |
| GAGACTGATGATTGCCGTTT+CGG | 0.334617 | 8.3:-72183537 | None:intergenic |
| AACTGAAAACAAATCATATC+TGG | 0.352692 | 8.3:+72183629 | MS.gene052727:CDS |
| AGCAGAAGCAGGTTTGCATT+TGG | 0.358700 | 8.3:-72180381 | None:intergenic |
| GCAGAAGCAGGTTTGCATTT+GGG | 0.359151 | 8.3:-72180380 | None:intergenic |
| CAAGATAAAAGAAGCCTTGT+TGG | 0.360419 | 8.3:+72183443 | MS.gene052727:CDS |
| TACATTGTTCATAAAGTTGT+TGG | 0.388733 | 8.3:-72183725 | None:intergenic |
| ACTACATTAAAGGATACTAA+TGG | 0.429817 | 8.3:+72182088 | MS.gene052727:CDS |
| ACATTGTTCATAAAGTTGTT+GGG | 0.441124 | 8.3:-72183724 | None:intergenic |
| TGCGCGGTGAAACTATCAAA+TGG | 0.448048 | 8.3:+72183844 | MS.gene052727:CDS |
| GAAGCAGCAGCAGCAGAAGC+AGG | 0.453799 | 8.3:-72180392 | None:intergenic |
| GCAGCACTGGAAGAAGAAAC+TGG | 0.460806 | 8.3:-72180422 | None:intergenic |
| ATAATATTACTCAAGTTCCT+AGG | 0.465364 | 8.3:+72180354 | MS.gene052727:CDS |
| CAGCAAAACAAAAGGTGGTC+AGG | 0.470148 | 8.3:+72183514 | MS.gene052727:CDS |
| ATTCTCCTTGACCCTCAGTT+CGG | 0.477510 | 8.3:+72180181 | MS.gene052727:CDS |
| AGAATGGCTTTCCATTTACC+AGG | 0.481104 | 8.3:-72180163 | None:intergenic |
| ATCACCTTCACCAAAACAAA+AGG | 0.490999 | 8.3:+72183473 | MS.gene052727:CDS |
| AAAAGGTGGTCAGGCCGAAA+CGG | 0.494784 | 8.3:+72183523 | MS.gene052727:CDS |
| GAACTGAGGGTCAAGGAGAA+TGG | 0.501381 | 8.3:-72180179 | None:intergenic |
| CTGGAAGAAGAAACTGGAAC+AGG | 0.504774 | 8.3:-72180416 | None:intergenic |
| GGAGGAACAATTTGAAGAGG+AGG | 0.508616 | 8.3:-72180500 | None:intergenic |
| GAAGAAGACGCTCTTATCGC+TGG | 0.509747 | 8.3:+72180124 | MS.gene052727:CDS |
| GCGCGGTGAAACTATCAAAT+GGG | 0.518902 | 8.3:+72183845 | MS.gene052727:CDS |
| AGTCACTGACTGCAAGGTTG+AGG | 0.520186 | 8.3:+72182465 | MS.gene052727:CDS |
| ATTGCTGCAGCAAAAGCATC+AGG | 0.521800 | 8.3:+72182424 | MS.gene052727:intron |
| TGCCATTGCTAGTTTCATTG+AGG | 0.522914 | 8.3:+72182123 | MS.gene052727:CDS |
| ATCACCTTCAGCAAAACAAA+AGG | 0.539850 | 8.3:+72183506 | MS.gene052727:CDS |
| TTGAGGATGCTTGTGAGTCA+AGG | 0.546963 | 8.3:+72182482 | MS.gene052727:CDS |
| TCGTTCCAACATCGACCTCA+AGG | 0.556659 | 8.3:+72180219 | MS.gene052727:CDS |
| TCAGAAAGTCACTGACTGCA+AGG | 0.561065 | 8.3:+72182459 | MS.gene052727:CDS |
| ACCAACCTTGAGGTCGATGT+TGG | 0.562701 | 8.3:-72180224 | None:intergenic |
| TTAACAACAACATCAGAAGA+AGG | 0.563592 | 8.3:-72180467 | None:intergenic |
| GAGTCAAGGGAAGCTTGAAA+AGG | 0.565631 | 8.3:+72182496 | MS.gene052727:CDS |
| GGTTTGCATTTGGGAAACCT+AGG | 0.568248 | 8.3:-72180371 | None:intergenic |
| CAACAACATCAGAAGAAGGA+AGG | 0.571467 | 8.3:-72180463 | None:intergenic |
| GGAGGAGGAACAATTTGAAG+AGG | 0.571972 | 8.3:-72180503 | None:intergenic |
| TGAGGATGCTTGTGAGTCAA+GGG | 0.572315 | 8.3:+72182483 | MS.gene052727:CDS |
| CAAATCATATCTGGCAACTG+AGG | 0.579566 | 8.3:+72183638 | MS.gene052727:CDS |
| TCAATTTATGCAGGTTTGCG+CGG | 0.581480 | 8.3:+72183828 | MS.gene052727:intron |
| AACAACATCAGAAGAAGGAA+GGG | 0.586040 | 8.3:-72180462 | None:intergenic |
| AACTGAGGCAGTCAAGGCGA+CGG | 0.589786 | 8.3:+72183653 | MS.gene052727:CDS |
| TCTGGCAACTGAGGCAGTCA+AGG | 0.592576 | 8.3:+72183647 | MS.gene052727:CDS |
| TTGGAACGAGAAGTGAGTAA+AGG | 0.596141 | 8.3:-72180205 | None:intergenic |
| GGAATCGAAAGACATGGCCC+TGG | 0.601309 | 8.3:+72180145 | MS.gene052727:CDS |
| AGTCTCTGATGATATGCTGA+AGG | 0.602271 | 8.3:+72183572 | MS.gene052727:CDS |
| ACCTTCAGCAAAACAAAAGG+TGG | 0.623190 | 8.3:+72183509 | MS.gene052727:CDS |
| AACCTCAATGAAACTAGCAA+TGG | 0.624133 | 8.3:-72182125 | None:intergenic |
| AAGGACCGAACTGAGGGTCA+AGG | 0.625130 | 8.3:-72180186 | None:intergenic |
| ACCTTCACCAAAACAAAAGG+AGG | 0.631938 | 8.3:+72183476 | MS.gene052727:CDS |
| TGAGTAAAGGACCGAACTGA+GGG | 0.636132 | 8.3:-72180192 | None:intergenic |
| GAATGGCTTTCCATTTACCA+GGG | 0.646220 | 8.3:-72180162 | None:intergenic |
| GTGAGTAAAGGACCGAACTG+AGG | 0.646832 | 8.3:-72180193 | None:intergenic |
| ACTAGCAATGGCATTTACGT+CGG | 0.664174 | 8.3:-72182113 | None:intergenic |
| ATCGCTGGAATCGAAAGACA+TGG | 0.677427 | 8.3:+72180139 | MS.gene052727:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTAAAAGTTTAATTAAATT+TGG | - | chr8.3:72181773-72181792 | None:intergenic | 10.0% |
| !! | TTAATATATCAGATTATATT+AGG | + | chr8.3:72182009-72182028 | MS.gene052727:intron | 10.0% |
| !!! | AATATATATTTCTTTGTTTT+AGG | + | chr8.3:72180307-72180326 | MS.gene052727:intron | 10.0% |
| !!! | ATTATAAATGTTTTGTTAAA+AGG | + | chr8.3:72181578-72181597 | MS.gene052727:intron | 10.0% |
| !!! | TGACTAAATTTTTATTTTTT+TGG | - | chr8.3:72180766-72180785 | None:intergenic | 10.0% |
| !!! | TTATAAATGTTTTGTTAAAA+GGG | + | chr8.3:72181579-72181598 | MS.gene052727:intron | 10.0% |
| !! | AAAACATTTATAATACTTAC+AGG | - | chr8.3:72181572-72181591 | None:intergenic | 15.0% |
| !!! | TTTAATTAAATTTGGTGAAA+CGG | - | chr8.3:72181765-72181784 | None:intergenic | 15.0% |
| !! | AAATAAAATATTGTTGAGTG+AGG | + | chr8.3:72180924-72180943 | MS.gene052727:intron | 20.0% |
| !! | AATAAAATATTGTTGAGTGA+GGG | + | chr8.3:72180925-72180944 | MS.gene052727:intron | 20.0% |
| !! | AGAGTTTATTCAAGATTTAT+TGG | + | chr8.3:72181095-72181114 | MS.gene052727:intron | 20.0% |
| !! | ATCAGATTATATTAGGTTAT+TGG | + | chr8.3:72182016-72182035 | MS.gene052727:intron | 20.0% |
| !! | ATGTAAGAATTAAAATACCT+AGG | - | chr8.3:72180566-72180585 | None:intergenic | 20.0% |
| !! | TAATGATTCTTTACATTCAT+TGG | + | chr8.3:72181499-72181518 | MS.gene052727:intron | 20.0% |
| !! | TATTGTTAAATCATGTTGTT+TGG | + | chr8.3:72182603-72182622 | MS.gene052727:intron | 20.0% |
| !!! | ACTTGGAAAATTAGTTTATA+TGG | + | chr8.3:72182315-72182334 | MS.gene052727:intron | 20.0% |
| !!! | TTAATTAAATTTGGTGAAAC+GGG | - | chr8.3:72181764-72181783 | None:intergenic | 20.0% |
| !!! | TTCTTTTGCTATTAATTTGA+TGG | + | chr8.3:72181951-72181970 | MS.gene052727:intron | 20.0% |
| !!! | TTTCTTTGTTTTAGGATAAA+TGG | + | chr8.3:72180315-72180334 | MS.gene052727:intron | 20.0% |
| !!! | TTTTGTACTAAATAGTGAAT+CGG | + | chr8.3:72181218-72181237 | MS.gene052727:intron | 20.0% |
| ! | AACTGAAAACAAATCATATC+TGG | + | chr8.3:72183629-72183648 | MS.gene052727:CDS | 25.0% |
| ! | AATTATAACCATTGATCTTG+TGG | + | chr8.3:72183804-72183823 | MS.gene052727:intron | 25.0% |
| ! | ACAATATCTGTGTTTCATAA+GGG | - | chr8.3:72181717-72181736 | None:intergenic | 25.0% |
| ! | ACAGACACTAAAAAATACAA+GGG | - | chr8.3:72182722-72182741 | None:intergenic | 25.0% |
| ! | ACATTGTTCATAAAGTTGTT+GGG | - | chr8.3:72183727-72183746 | None:intergenic | 25.0% |
| ! | ACTACATTAAAGGATACTAA+TGG | + | chr8.3:72182088-72182107 | MS.gene052727:CDS | 25.0% |
| ! | AGATCTTGAATACATAAATG+TGG | - | chr8.3:72182813-72182832 | None:intergenic | 25.0% |
| ! | ATAATATTACTCAAGTTCCT+AGG | + | chr8.3:72180354-72180373 | MS.gene052727:CDS | 25.0% |
| ! | ATAGTGTATTGTTACAATTC+TGG | + | chr8.3:72181148-72181167 | MS.gene052727:intron | 25.0% |
| ! | ATATCAACGACTAGAATAAA+TGG | + | chr8.3:72182266-72182285 | MS.gene052727:intron | 25.0% |
| ! | ATGACATCATACCTAATAAA+AGG | - | chr8.3:72182052-72182071 | None:intergenic | 25.0% |
| ! | ATTATAACCATTGATCTTGT+GGG | + | chr8.3:72183805-72183824 | MS.gene052727:intron | 25.0% |
| ! | ATTATGACTCTGTAGTTAAA+AGG | + | chr8.3:72181419-72181438 | MS.gene052727:intron | 25.0% |
| ! | ATTCAAGATTTATTGGAGTA+AGG | + | chr8.3:72181102-72181121 | MS.gene052727:intron | 25.0% |
| ! | ATTGCATAATCTCAAAAAAC+AGG | - | chr8.3:72182235-72182254 | None:intergenic | 25.0% |
| ! | TACAATATCTGTGTTTCATA+AGG | - | chr8.3:72181718-72181737 | None:intergenic | 25.0% |
| ! | TACATTGTTCATAAAGTTGT+TGG | - | chr8.3:72183728-72183747 | None:intergenic | 25.0% |
| ! | TCTGTTATTGTAAGAATCTT+GGG | + | chr8.3:72183119-72183138 | MS.gene052727:intron | 25.0% |
| ! | TTGCATAATCTCAAAAAACA+GGG | - | chr8.3:72182234-72182253 | None:intergenic | 25.0% |
| ! | TTTATGTATTCAAGATCTCT+TGG | + | chr8.3:72182815-72182834 | MS.gene052727:intron | 25.0% |
| !! | AACTTGAATTCTTTGAAAGA+GGG | + | chr8.3:72183073-72183092 | MS.gene052727:intron | 25.0% |
| !! | ATTTGAACGTGTATTTTACT+TGG | + | chr8.3:72182577-72182596 | MS.gene052727:intron | 25.0% |
| !! | GGTTTTTAAATTGATCCTAT+AGG | + | chr8.3:72181828-72181847 | MS.gene052727:intron | 25.0% |
| !! | GTACTTTTGTTCCTTTTATT+AGG | + | chr8.3:72182038-72182057 | MS.gene052727:intron | 25.0% |
| !! | TAATTTTCCAAGTTACATCA+AGG | - | chr8.3:72182308-72182327 | None:intergenic | 25.0% |
| !! | TAATTTTCCTTGATGTAACT+TGG | + | chr8.3:72182298-72182317 | MS.gene052727:intron | 25.0% |
| !! | TGGTTAATTTGGAAACTTAT+AGG | + | chr8.3:72182835-72182854 | MS.gene052727:intron | 25.0% |
| !!! | TGTTGTTTTTAACAACATCT+TGG | - | chr8.3:72180541-72180560 | None:intergenic | 25.0% |
| AAAATACAAGGGAAAAACTG+TGG | - | chr8.3:72182711-72182730 | None:intergenic | 30.0% | |
| AAATAAACACACGCACTAAA+GGG | - | chr8.3:72180867-72180886 | None:intergenic | 30.0% | |
| AACTTATAGGTATAACTGTG+TGG | + | chr8.3:72182848-72182867 | MS.gene052727:intron | 30.0% | |
| ACCAAACTTCAAGATATTTC+AGG | - | chr8.3:72183341-72183360 | None:intergenic | 30.0% | |
| ACTTATAGGTATAACTGTGT+GGG | + | chr8.3:72182849-72182868 | MS.gene052727:intron | 30.0% | |
| ATTGTTACAGAATAGTGGTT+TGG | + | chr8.3:72180787-72180806 | MS.gene052727:intron | 30.0% | |
| CAATATCTGTGTTTCATAAG+GGG | - | chr8.3:72181716-72181735 | None:intergenic | 30.0% | |
| CACAGACACTAAAAAATACA+AGG | - | chr8.3:72182723-72182742 | None:intergenic | 30.0% | |
| CTCTGTTATTGTAAGAATCT+TGG | + | chr8.3:72183118-72183137 | MS.gene052727:intron | 30.0% | |
| GTCAAATTGTTACAGAATAG+TGG | + | chr8.3:72180782-72180801 | MS.gene052727:intron | 30.0% | |
| TCAAGATCTCTTGGTTAATT+TGG | + | chr8.3:72182824-72182843 | MS.gene052727:intron | 30.0% | |
| TCCTGAAATATCTTGAAGTT+TGG | + | chr8.3:72183337-72183356 | MS.gene052727:intron | 30.0% | |
| TCTTCTAAACAATTCGTCAT+TGG | - | chr8.3:72180634-72180653 | None:intergenic | 30.0% | |
| TTAACAACAACATCAGAAGA+AGG | - | chr8.3:72180470-72180489 | None:intergenic | 30.0% | |
| TTATTGTAAGAATCTTGGGT+GGG | + | chr8.3:72183123-72183142 | MS.gene052727:intron | 30.0% | |
| TTGTTAAAAACAACACACCT+AGG | + | chr8.3:72180546-72180565 | MS.gene052727:CDS | 30.0% | |
| TTGTTAAATAGCAGCTATAG+AGG | - | chr8.3:72181293-72181312 | None:intergenic | 30.0% | |
| TTTCAAACCAACTCACAAAA+TGG | - | chr8.3:72182209-72182228 | None:intergenic | 30.0% | |
| ! | ACTTAAGTTGCACATATTTC+TGG | - | chr8.3:72183026-72183045 | None:intergenic | 30.0% |
| ! | AGTTAAAAGGCTTTTGTACT+CGG | + | chr8.3:72181432-72181451 | MS.gene052727:intron | 30.0% |
| ! | CTATAGCTGCTATTTAACAA+CGG | + | chr8.3:72181293-72181312 | MS.gene052727:intron | 30.0% |
| ! | CTTAAGTTGCACATATTTCT+GGG | - | chr8.3:72183025-72183044 | None:intergenic | 30.0% |
| ! | GAACTTGAATTCTTTGAAAG+AGG | + | chr8.3:72183072-72183091 | MS.gene052727:intron | 30.0% |
| ! | GCATTGTTTTCCACTAAAAT+AGG | + | chr8.3:72182988-72183007 | MS.gene052727:intron | 30.0% |
| ! | GTTGTGAGGAAATTTTATGT+GGG | + | chr8.3:72180809-72180828 | MS.gene052727:intron | 30.0% |
| ! | TACTATACCATTTTGTGAGT+TGG | + | chr8.3:72182199-72182218 | MS.gene052727:intron | 30.0% |
| ! | TCAAGTTCTAACGAATATGA+TGG | - | chr8.3:72183060-72183079 | None:intergenic | 30.0% |
| ! | TTGTTTTCCACTAAAATAGG+TGG | + | chr8.3:72182991-72183010 | MS.gene052727:intron | 30.0% |
| !! | ATTAGAGCATCATTTTGTAC+TGG | + | chr8.3:72181614-72181633 | MS.gene052727:intron | 30.0% |
| !! | TGTTTTGTTAAAAGGGTAGA+AGG | + | chr8.3:72181586-72181605 | MS.gene052727:intron | 30.0% |
| !!! | AGTGACTTTCTGAAATTTTG+AGG | - | chr8.3:72182452-72182471 | None:intergenic | 30.0% |
| !!! | CTTTGTTTTAGGATAAATGG+AGG | + | chr8.3:72180318-72180337 | MS.gene052727:intron | 30.0% |
| !!! | TGTATTTTTTAGTGTCTGTG+CGG | + | chr8.3:72182723-72182742 | MS.gene052727:intron | 30.0% |
| AAAAACGAAAACCCTAAGCT+AGG | - | chr8.3:72180252-72180271 | None:intergenic | 35.0% | |
| AAATTGACCCACAAGATCAA+TGG | - | chr8.3:72183815-72183834 | None:intergenic | 35.0% | |
| AACAACATCAGAAGAAGGAA+GGG | - | chr8.3:72180465-72180484 | None:intergenic | 35.0% | |
| AACCTCAATGAAACTAGCAA+TGG | - | chr8.3:72182128-72182147 | None:intergenic | 35.0% | |
| AAGCACAGGAACATCTATTT+GGG | - | chr8.3:72183266-72183285 | None:intergenic | 35.0% | |
| AATAAACACACGCACTAAAG+GGG | - | chr8.3:72180866-72180885 | None:intergenic | 35.0% | |
| ATAGGTGTACATGTAATGAC+AGG | + | chr8.3:72181846-72181865 | MS.gene052727:intron | 35.0% | |
| ATCACCTTCACCAAAACAAA+AGG | + | chr8.3:72183473-72183492 | MS.gene052727:CDS | 35.0% | |
| ATCACCTTCAGCAAAACAAA+AGG | + | chr8.3:72183506-72183525 | MS.gene052727:CDS | 35.0% | |
| CAAATAAACACACGCACTAA+AGG | - | chr8.3:72180868-72180887 | None:intergenic | 35.0% | |
| CATATTATCTCATCCAATGC+AGG | - | chr8.3:72180953-72180972 | None:intergenic | 35.0% | |
| CTTTACATTCATTGGATGTC+TGG | + | chr8.3:72181507-72181526 | MS.gene052727:intron | 35.0% | |
| GCGTGTGTTTATTTGAGTAT+GGG | + | chr8.3:72180873-72180892 | MS.gene052727:intron | 35.0% | |
| GCTATCGTAGAATATTGCTT+TGG | + | chr8.3:72182902-72182921 | MS.gene052727:intron | 35.0% | |
| GTCATTACATGTACACCTAT+AGG | - | chr8.3:72181846-72181865 | None:intergenic | 35.0% | |
| GTGTTTATTTGAGTATGGGT+TGG | + | chr8.3:72180877-72180896 | MS.gene052727:intron | 35.0% | |
| GTTATTGTAAGAATCTTGGG+TGG | + | chr8.3:72183122-72183141 | MS.gene052727:intron | 35.0% | |
| TAGGTGTACATGTAATGACA+GGG | + | chr8.3:72181847-72181866 | MS.gene052727:intron | 35.0% | |
| TATATCGTAGTGACTAGAGA+TGG | + | chr8.3:72181667-72181686 | MS.gene052727:intron | 35.0% | |
| TATGTGACAATCAGTCTGAT+CGG | + | chr8.3:72181800-72181819 | MS.gene052727:intron | 35.0% | |
| TATTGTAAGAATCTTGGGTG+GGG | + | chr8.3:72183124-72183143 | MS.gene052727:intron | 35.0% | |
| TCCTGCAGATGGTAAAAAAT+TGG | - | chr8.3:72183411-72183430 | None:intergenic | 35.0% | |
| TCTAAACAATTCGTCATTGG+CGG | - | chr8.3:72180631-72180650 | None:intergenic | 35.0% | |
| TGCGTGTGTTTATTTGAGTA+TGG | + | chr8.3:72180872-72180891 | MS.gene052727:intron | 35.0% | |
| TTCATGTCACTCTAGATGTT+TGG | + | chr8.3:72181348-72181367 | MS.gene052727:intron | 35.0% | |
| ! | AACAATTTTGTTCCTGCAGA+TGG | - | chr8.3:72183422-72183441 | None:intergenic | 35.0% |
| ! | AGAACCTGAGTTTGATTTCT+TGG | + | chr8.3:72180651-72180670 | MS.gene052727:intron | 35.0% |
| ! | AGCATCATTTTGTACTGGAT+TGG | + | chr8.3:72181619-72181638 | MS.gene052727:intron | 35.0% |
| ! | ATTGGAAAGAGTGATGATGA+TGG | - | chr8.3:72183187-72183206 | None:intergenic | 35.0% |
| ! | CAAGATAAAAGAAGCCTTGT+TGG | + | chr8.3:72183443-72183462 | MS.gene052727:CDS | 35.0% |
| ! | GAAATTTTATGTGGGTGTCT+GGG | + | chr8.3:72180817-72180836 | MS.gene052727:intron | 35.0% |
| ! | GGTTGTGAGGAAATTTTATG+TGG | + | chr8.3:72180808-72180827 | MS.gene052727:intron | 35.0% |
| ! | TGAAGCTCTGACTACATTAA+AGG | + | chr8.3:72182078-72182097 | MS.gene052727:CDS | 35.0% |
| ! | TTTTGCTGCAGCAATATATG+TGG | - | chr8.3:72182419-72182438 | None:intergenic | 35.0% |
| !! | ACATCTTGGTCATTTTGAAG+AGG | - | chr8.3:72180527-72180546 | None:intergenic | 35.0% |
| !!! | AGGTGATTTTTTCACCAACA+AGG | - | chr8.3:72183460-72183479 | None:intergenic | 35.0% |
| !!! | ATTTTGATTAACAGCAGCAC+TGG | - | chr8.3:72180438-72180457 | None:intergenic | 35.0% |
| !!! | TCCAATTTTTTACCATCTGC+AGG | + | chr8.3:72183407-72183426 | MS.gene052727:intron | 35.0% |
| !!! | TTTTGTTTTGCTGAAGGTGA+TGG | - | chr8.3:72183507-72183526 | None:intergenic | 35.0% |
| AAAACCGTCTTAGAAGGAGA+GGG | - | chr8.3:72181061-72181080 | None:intergenic | 40.0% | |
| AACAACATGCACAGTCGATA+AGG | + | chr8.3:72182960-72182979 | MS.gene052727:intron | 40.0% | |
| ACCTTCACCAAAACAAAAGG+AGG | + | chr8.3:72183476-72183495 | MS.gene052727:CDS | 40.0% | |
| ACCTTCAGCAAAACAAAAGG+TGG | + | chr8.3:72183509-72183528 | MS.gene052727:CDS | 40.0% | |
| ACTAGCAATGGCATTTACGT+CGG | - | chr8.3:72182116-72182135 | None:intergenic | 40.0% | |
| AGAATGGCTTTCCATTTACC+AGG | - | chr8.3:72180166-72180185 | None:intergenic | 40.0% | |
| AGACCACTAAGCTTGAACAA+AGG | - | chr8.3:72182774-72182793 | None:intergenic | 40.0% | |
| AGTCTCTGATGATATGCTGA+AGG | + | chr8.3:72183572-72183591 | MS.gene052727:CDS | 40.0% | |
| AGTGACATGAATGAGCCTAT+AGG | - | chr8.3:72181339-72181358 | None:intergenic | 40.0% | |
| AGTGTTGCGTGTAGAAACAT+TGG | - | chr8.3:72183205-72183224 | None:intergenic | 40.0% | |
| ATAAACACACGCACTAAAGG+GGG | - | chr8.3:72180865-72180884 | None:intergenic | 40.0% | |
| ATGTTTGGTTGTTGTAGTCG+TGG | + | chr8.3:72181363-72181382 | MS.gene052727:intron | 40.0% | |
| ATTGTAAGAATCTTGGGTGG+GGG | + | chr8.3:72183125-72183144 | MS.gene052727:intron | 40.0% | |
| CAAATCATATCTGGCAACTG+AGG | + | chr8.3:72183638-72183657 | MS.gene052727:CDS | 40.0% | |
| CAACAACATCAGAAGAAGGA+AGG | - | chr8.3:72180466-72180485 | None:intergenic | 40.0% | |
| CAATCAGTCTGATCGGTAAA+AGG | + | chr8.3:72181807-72181826 | MS.gene052727:intron | 40.0% | |
| CTCTACAAAACCGTCTTAGA+AGG | - | chr8.3:72181067-72181086 | None:intergenic | 40.0% | |
| GAAGCACAGGAACATCTATT+TGG | - | chr8.3:72183267-72183286 | None:intergenic | 40.0% | |
| GAATGGCTTTCCATTTACCA+GGG | - | chr8.3:72180165-72180184 | None:intergenic | 40.0% | |
| GCATGTTGTTGAGAAGTTTC+TGG | - | chr8.3:72182950-72182969 | None:intergenic | 40.0% | |
| TAATTCAGAGTTCGGTCAGA+AGG | - | chr8.3:72180706-72180725 | None:intergenic | 40.0% | |
| TATCACGTAAGCATCAACAG+AGG | - | chr8.3:72182531-72182550 | None:intergenic | 40.0% | |
| TCAATTTATGCAGGTTTGCG+CGG | + | chr8.3:72183828-72183847 | MS.gene052727:intron | 40.0% | |
| TCACCTTTGTTCAAGCTTAG+TGG | + | chr8.3:72182768-72182787 | MS.gene052727:intron | 40.0% | |
| TCCACCAAGAAATCAAACTC+AGG | - | chr8.3:72180658-72180677 | None:intergenic | 40.0% | |
| TCTTGTGGGTCAATTTATGC+AGG | + | chr8.3:72183819-72183838 | MS.gene052727:intron | 40.0% | |
| TGTTTGGTTGTTGTAGTCGT+GGG | + | chr8.3:72181364-72181383 | MS.gene052727:intron | 40.0% | |
| TTGGAACGAGAAGTGAGTAA+AGG | - | chr8.3:72180208-72180227 | None:intergenic | 40.0% | |
| ! | AAAAGGCTTTTGTACTCGGA+TGG | + | chr8.3:72181436-72181455 | MS.gene052727:intron | 40.0% |
| ! | AAGGTTGGTTACCTAGCTTA+GGG | + | chr8.3:72180238-72180257 | MS.gene052727:intron | 40.0% |
| ! | ACCTGAGTTTGATTTCTTGG+TGG | + | chr8.3:72180654-72180673 | MS.gene052727:intron | 40.0% |
| ! | ATCATGTTGTTTGGTCGAGT+TGG | + | chr8.3:72182612-72182631 | MS.gene052727:intron | 40.0% |
| ! | CTGCTATTTAACAACGGTGT+TGG | + | chr8.3:72181299-72181318 | MS.gene052727:intron | 40.0% |
| ! | GGAAATTTTATGTGGGTGTC+TGG | + | chr8.3:72180816-72180835 | MS.gene052727:intron | 40.0% |
| ! | TGCCATTGCTAGTTTCATTG+AGG | + | chr8.3:72182123-72182142 | MS.gene052727:CDS | 40.0% |
| ! | TGTTGTTGAGAAGTTTCTGG+TGG | - | chr8.3:72182947-72182966 | None:intergenic | 40.0% |
| !! | AGAATAGTGGTTTGGTTGTG+AGG | + | chr8.3:72180795-72180814 | MS.gene052727:intron | 40.0% |
| !! | ATTTGGGAGAGTTTTAGTCC+TGG | - | chr8.3:72183250-72183269 | None:intergenic | 40.0% |
| !! | GTTGTTGAGAAGTTTCTGGT+GGG | - | chr8.3:72182946-72182965 | None:intergenic | 40.0% |
| !! | TCTTGGTCATTTTGAAGAGG+AGG | - | chr8.3:72180524-72180543 | None:intergenic | 40.0% |
| !! | TGACATGCCACCTATTTTAG+TGG | - | chr8.3:72183001-72183020 | None:intergenic | 40.0% |
| !! | TTGAGTATGGGTTGGTTACT+TGG | + | chr8.3:72180885-72180904 | MS.gene052727:intron | 40.0% |
| !!! | ACCACCTTTTGTTTTGCTGA+AGG | - | chr8.3:72183513-72183532 | None:intergenic | 40.0% |
| !!! | CTTCTAAGACGGTTTTGTAG+AGG | + | chr8.3:72181065-72181084 | MS.gene052727:intron | 40.0% |
| !!! | TTTTTTTGGCGTTAACCCTC+CGG | - | chr8.3:72180752-72180771 | None:intergenic | 40.0% |
| AAAGACATGGCCCTGGTAAA+TGG | + | chr8.3:72180152-72180171 | MS.gene052727:CDS | 45.0% | |
| AAGCTAGGTAACCAACCTTG+AGG | - | chr8.3:72180237-72180256 | None:intergenic | 45.0% | |
| AGATGTTCCTGTGCTTCCAT+TGG | + | chr8.3:72183270-72183289 | MS.gene052727:intron | 45.0% | |
| AGCAGAAGCAGGTTTGCATT+TGG | - | chr8.3:72180384-72180403 | None:intergenic | 45.0% | |
| AGCCCTGGTAATTCAGAGTT+CGG | - | chr8.3:72180714-72180733 | None:intergenic | 45.0% | |
| AGGGAAAAACTGTGGAGCAT+AGG | - | chr8.3:72182703-72182722 | None:intergenic | 45.0% | |
| ATCGCTGGAATCGAAAGACA+TGG | + | chr8.3:72180139-72180158 | MS.gene052727:CDS | 45.0% | |
| ATGAGCCTATAGGCTATAGC+AGG | - | chr8.3:72181329-72181348 | None:intergenic | 45.0% | |
| ATTCTCCTTGACCCTCAGTT+CGG | + | chr8.3:72180181-72180200 | MS.gene052727:CDS | 45.0% | |
| CAAAACCGTCTTAGAAGGAG+AGG | - | chr8.3:72181062-72181081 | None:intergenic | 45.0% | |
| CAGCAAAACAAAAGGTGGTC+AGG | + | chr8.3:72183514-72183533 | MS.gene052727:CDS | 45.0% | |
| CTGGAAGAAGAAACTGGAAC+AGG | - | chr8.3:72180419-72180438 | None:intergenic | 45.0% | |
| GAAAAACTGTGGAGCATAGG+AGG | - | chr8.3:72182700-72182719 | None:intergenic | 45.0% | |
| GACCGAACTCTGAATTACCA+GGG | + | chr8.3:72180709-72180728 | MS.gene052727:intron | 45.0% | |
| GACGGAAAAATACTCACGCA+TGG | + | chr8.3:72183671-72183690 | MS.gene052727:CDS | 45.0% | |
| GAGTCAAGGGAAGCTTGAAA+AGG | + | chr8.3:72182496-72182515 | MS.gene052727:CDS | 45.0% | |
| GATGTTCCTGTGCTTCCATT+GGG | + | chr8.3:72183271-72183290 | MS.gene052727:intron | 45.0% | |
| GCAGAAGCAGGTTTGCATTT+GGG | - | chr8.3:72180383-72180402 | None:intergenic | 45.0% | |
| GCGCGGTGAAACTATCAAAT+GGG | + | chr8.3:72183845-72183864 | MS.gene052727:CDS | 45.0% | |
| GCTATACTGCTAGAGCGTAA+TGG | - | chr8.3:72181269-72181288 | None:intergenic | 45.0% | |
| GGAGGAACAATTTGAAGAGG+AGG | - | chr8.3:72180503-72180522 | None:intergenic | 45.0% | |
| GGAGGAGGAACAATTTGAAG+AGG | - | chr8.3:72180506-72180525 | None:intergenic | 45.0% | |
| GGTTTGCATTTGGGAAACCT+AGG | - | chr8.3:72180374-72180393 | None:intergenic | 45.0% | |
| GTATAACTGTGTGGGCGATT+TGG | + | chr8.3:72182857-72182876 | MS.gene052727:intron | 45.0% | |
| GTTTGGTTGTTGTAGTCGTG+GGG | + | chr8.3:72181365-72181384 | MS.gene052727:intron | 45.0% | |
| TGACCGAACTCTGAATTACC+AGG | + | chr8.3:72180708-72180727 | MS.gene052727:intron | 45.0% | |
| TGAGGATGCTTGTGAGTCAA+GGG | + | chr8.3:72182483-72182502 | MS.gene052727:CDS | 45.0% | |
| TGAGTAAAGGACCGAACTGA+GGG | - | chr8.3:72180195-72180214 | None:intergenic | 45.0% | |
| TGCGCGGTGAAACTATCAAA+TGG | + | chr8.3:72183844-72183863 | MS.gene052727:CDS | 45.0% | |
| TGCTTTGGCAATTGACCAGA+GGG | + | chr8.3:72182917-72182936 | MS.gene052727:intron | 45.0% | |
| TGGAGTAAGGTTGTCAATCG+CGG | + | chr8.3:72181115-72181134 | MS.gene052727:intron | 45.0% | |
| TTGAGGATGCTTGTGAGTCA+AGG | + | chr8.3:72182482-72182501 | MS.gene052727:CDS | 45.0% | |
| TTGCTTTGGCAATTGACCAG+AGG | + | chr8.3:72182916-72182935 | MS.gene052727:intron | 45.0% | |
| TTTGGTTGTTGTAGTCGTGG+GGG | + | chr8.3:72181366-72181385 | MS.gene052727:intron | 45.0% | |
| ! | ACATCCCTCTCCTTCTAAGA+CGG | + | chr8.3:72181054-72181073 | MS.gene052727:intron | 45.0% |
| ! | CAAGGTTGGTTACCTAGCTT+AGG | + | chr8.3:72180237-72180256 | MS.gene052727:intron | 45.0% |
| ! | GAGACTGATGATTGCCGTTT+CGG | - | chr8.3:72183540-72183559 | None:intergenic | 45.0% |
| ! | TCAGAAAGTCACTGACTGCA+AGG | + | chr8.3:72182459-72182478 | MS.gene052727:CDS | 45.0% |
| ! | TTTTGTACTCGGATGGTCGA+CGG | + | chr8.3:72181443-72181462 | MS.gene052727:intron | 45.0% |
| !! | ATTGCTGCAGCAAAAGCATC+AGG | + | chr8.3:72182424-72182443 | MS.gene052727:intron | 45.0% |
| !! | CTAAGACGGTTTTGTAGAGG+TGG | + | chr8.3:72181068-72181087 | MS.gene052727:intron | 45.0% |
| !! | GAGAGTTTTAGTCCTGGCAA+TGG | - | chr8.3:72183244-72183263 | None:intergenic | 45.0% |
| !! | GGGTTGGTTACTTGGTCAAT+TGG | + | chr8.3:72180893-72180912 | MS.gene052727:intron | 45.0% |
| !! | TGGTCATTTTGAAGAGGAGG+AGG | - | chr8.3:72180521-72180540 | None:intergenic | 45.0% |
| !! | TTTTGCTGAAGGTGATGGCT+TGG | - | chr8.3:72183502-72183521 | None:intergenic | 45.0% |
| !!! | GCCTCCTTTTGTTTTGGTGA+AGG | - | chr8.3:72183480-72183499 | None:intergenic | 45.0% |
| !!! | GGGGATTTTTTCGCAAGTAG+AGG | + | chr8.3:72183144-72183163 | MS.gene052727:intron | 45.0% |
| !! | TTAAAATTTAAATGAAAAAA+AGG | - | chr8.3:72180281-72180300 | None:intergenic | 5.0% |
| AAAAGGTGGTCAGGCCGAAA+CGG | + | chr8.3:72183523-72183542 | MS.gene052727:CDS | 50.0% | |
| AACAAACACCTCTCATGCCC+AGG | - | chr8.3:72181543-72181562 | None:intergenic | 50.0% | |
| ACCAACCTTGAGGTCGATGT+TGG | - | chr8.3:72180227-72180246 | None:intergenic | 50.0% | |
| ACGCACTAAAGGGGGAATTG+TGG | - | chr8.3:72180857-72180876 | None:intergenic | 50.0% | |
| AGCCTATAGGCTATAGCAGG+TGG | - | chr8.3:72181326-72181345 | None:intergenic | 50.0% | |
| AGGTTGTCAATCGCGGATAG+CGG | + | chr8.3:72181122-72181141 | MS.gene052727:intron | 50.0% | |
| ATGTCTGGTAGTCGTAGTCC+TGG | + | chr8.3:72181522-72181541 | MS.gene052727:intron | 50.0% | |
| CATTTCCCCTGAAAACCGGA+GGG | + | chr8.3:72180734-72180753 | MS.gene052727:intron | 50.0% | |
| GAACTGAGGGTCAAGGAGAA+TGG | - | chr8.3:72180182-72180201 | None:intergenic | 50.0% | |
| GAAGAAGACGCTCTTATCGC+TGG | + | chr8.3:72180124-72180143 | MS.gene052727:CDS | 50.0% | |
| GACCACCTGCTATAGCCTAT+AGG | + | chr8.3:72181321-72181340 | MS.gene052727:intron | 50.0% | |
| GGCTCATTTCCCCTGAAAAC+CGG | + | chr8.3:72180730-72180749 | MS.gene052727:intron | 50.0% | |
| GTGAGTAAAGGACCGAACTG+AGG | - | chr8.3:72180196-72180215 | None:intergenic | 50.0% | |
| TCATTTCCCCTGAAAACCGG+AGG | + | chr8.3:72180733-72180752 | MS.gene052727:intron | 50.0% | |
| TCCAACATCGACCTCAAGGT+TGG | + | chr8.3:72180223-72180242 | MS.gene052727:intron | 50.0% | |
| TCGTTCCAACATCGACCTCA+AGG | + | chr8.3:72180219-72180238 | MS.gene052727:CDS | 50.0% | |
| TGTCTGGTAGTCGTAGTCCT+GGG | + | chr8.3:72181523-72181542 | MS.gene052727:intron | 50.0% | |
| TTGAGTGAGGGTTCCTGCAT+TGG | + | chr8.3:72180937-72180956 | MS.gene052727:intron | 50.0% | |
| ! | AGTCACTGACTGCAAGGTTG+AGG | + | chr8.3:72182465-72182484 | MS.gene052727:CDS | 50.0% |
| ! | CATTGCTAGCTTCCATTGCC+AGG | + | chr8.3:72183229-72183248 | MS.gene052727:intron | 50.0% |
| ! | CGTTAACCCTCCGGTTTTCA+GGG | - | chr8.3:72180743-72180762 | None:intergenic | 50.0% |
| ! | GCAGCACTGGAAGAAGAAAC+TGG | - | chr8.3:72180425-72180444 | None:intergenic | 50.0% |
| ! | GTTAACCCTCCGGTTTTCAG+GGG | - | chr8.3:72180742-72180761 | None:intergenic | 50.0% |
| !! | GGCTTGGCCTCCTTTTGTTT+TGG | - | chr8.3:72183486-72183505 | None:intergenic | 50.0% |
| !! | TTTTCAGGGGAAATGAGCCC+TGG | - | chr8.3:72180729-72180748 | None:intergenic | 50.0% |
| AACTGAGGCAGTCAAGGCGA+CGG | + | chr8.3:72183653-72183672 | MS.gene052727:CDS | 55.0% | |
| AACTGTGGAGCATAGGAGGC+AGG | - | chr8.3:72182696-72182715 | None:intergenic | 55.0% | |
| AAGGACCGAACTGAGGGTCA+AGG | - | chr8.3:72180189-72180208 | None:intergenic | 55.0% | |
| AAGGGGGAATTGTGGAGACC+AGG | - | chr8.3:72180849-72180868 | None:intergenic | 55.0% | |
| ACAGAGCCACTACACAGCAG+AGG | - | chr8.3:72183104-72183123 | None:intergenic | 55.0% | |
| GGAATCGAAAGACATGGCCC+TGG | + | chr8.3:72180145-72180164 | MS.gene052727:CDS | 55.0% | |
| GTAGTGCCTCTGCTGTGTAG+TGG | + | chr8.3:72183095-72183114 | MS.gene052727:intron | 55.0% | |
| TCTGGCAACTGAGGCAGTCA+AGG | + | chr8.3:72183647-72183666 | MS.gene052727:CDS | 55.0% | |
| ! | GCGTTAACCCTCCGGTTTTC+AGG | - | chr8.3:72180744-72180763 | None:intergenic | 55.0% |
| !! | GTTTCTGGTGGGAAACCCTC+TGG | - | chr8.3:72182935-72182954 | None:intergenic | 55.0% |
| ATTGGGCCAACCTTGCCACG+GGG | + | chr8.3:72183288-72183307 | MS.gene052727:intron | 60.0% | |
| CATTGGGCCAACCTTGCCAC+GGG | + | chr8.3:72183287-72183306 | MS.gene052727:intron | 60.0% | |
| CCATTGGGCCAACCTTGCCA+CGG | + | chr8.3:72183286-72183305 | MS.gene052727:intron | 60.0% | |
| GAAGCAGCAGCAGCAGAAGC+AGG | - | chr8.3:72180395-72180414 | None:intergenic | 60.0% | |
| GTCGTAGTCCTGGGCATGAG+AGG | + | chr8.3:72181532-72181551 | MS.gene052727:intron | 60.0% | |
| TGGGTGTCTGGGTTCGATCC+TGG | + | chr8.3:72180828-72180847 | MS.gene052727:intron | 60.0% | |
| TGTAGTCGTGGGGGTGAGAG+CGG | + | chr8.3:72181375-72181394 | MS.gene052727:intron | 60.0% | |
| ! | GGTTGGCCCAATGGAAGCAC+AGG | - | chr8.3:72183280-72183299 | None:intergenic | 60.0% |
| ! | TTAAGAGCGCAGAGTCCCCG+TGG | - | chr8.3:72183306-72183325 | None:intergenic | 60.0% |
| CAGAGTCCCCGTGGCAAGGT+TGG | - | chr8.3:72183297-72183316 | None:intergenic | 65.0% | |
| ! | CCGTGGCAAGGTTGGCCCAA+TGG | - | chr8.3:72183289-72183308 | None:intergenic | 65.0% |
| AGCGCAGAGTCCCCGTGGCA+AGG | - | chr8.3:72183301-72183320 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 72180112 | 72183872 | 72180112 | ID=MS.gene052727 |
| chr8.3 | mRNA | 72180112 | 72183872 | 72180112 | ID=MS.gene052727.t1;Parent=MS.gene052727 |
| chr8.3 | exon | 72180112 | 72180240 | 72180112 | ID=MS.gene052727.t1.exon1;Parent=MS.gene052727.t1 |
| chr8.3 | CDS | 72180112 | 72180240 | 72180112 | ID=cds.MS.gene052727.t1;Parent=MS.gene052727.t1 |
| chr8.3 | exon | 72180329 | 72180567 | 72180329 | ID=MS.gene052727.t1.exon2;Parent=MS.gene052727.t1 |
| chr8.3 | CDS | 72180329 | 72180567 | 72180329 | ID=cds.MS.gene052727.t1;Parent=MS.gene052727.t1 |
| chr8.3 | exon | 72182060 | 72182144 | 72182060 | ID=MS.gene052727.t1.exon3;Parent=MS.gene052727.t1 |
| chr8.3 | CDS | 72182060 | 72182144 | 72182060 | ID=cds.MS.gene052727.t1;Parent=MS.gene052727.t1 |
| chr8.3 | exon | 72182434 | 72182517 | 72182434 | ID=MS.gene052727.t1.exon4;Parent=MS.gene052727.t1 |
| chr8.3 | CDS | 72182434 | 72182517 | 72182434 | ID=cds.MS.gene052727.t1;Parent=MS.gene052727.t1 |
| chr8.3 | exon | 72183429 | 72183744 | 72183429 | ID=MS.gene052727.t1.exon5;Parent=MS.gene052727.t1 |
| chr8.3 | CDS | 72183429 | 72183744 | 72183429 | ID=cds.MS.gene052727.t1;Parent=MS.gene052727.t1 |
| chr8.3 | exon | 72183841 | 72183872 | 72183841 | ID=MS.gene052727.t1.exon6;Parent=MS.gene052727.t1 |
| chr8.3 | CDS | 72183841 | 72183872 | 72183841 | ID=cds.MS.gene052727.t1;Parent=MS.gene052727.t1 |
| Gene Sequence |
| Protein sequence |
