Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053320.t1 | XP_024626489.1 | 72.4 | 1320 | 283 | 6 | 1 | 1302 | 1 | 1257 | 0.00E+00 | 1177.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053320.t1 | A0A072VGV5 | 72.4 | 1320 | 283 | 6 | 1 | 1302 | 1 | 1257 | 0.0e+00 | 1177.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053320 | MS.gene99878 | 0.807941 | 3.95E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053320.t1 | MTR_1g041300 | 77.569 | 1333 | 192 | 9 | 1 | 1302 | 1 | 1257 | 0.0 | 1914 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 162 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATCTTTGGACAAAGATTT+TGG | 0.164476 | 1.2:+25476358 | None:intergenic |
| ACATCTTCCTCTTCATCTTT+TGG | 0.183054 | 1.2:+25475845 | None:intergenic |
| ACATCTTCCTCTTCAGCTTT+TGG | 0.190174 | 1.2:+25475605 | None:intergenic |
| TTCTGATGAACAATCGATTC+TGG | 0.212452 | 1.2:-25474177 | MS.gene053320:CDS |
| AACAATTCAATATTTGTAAA+TGG | 0.218628 | 1.2:-25471341 | MS.gene053320:CDS |
| AGCTTTCTCTTGAACATCTT+TGG | 0.243891 | 1.2:+25475697 | None:intergenic |
| AGTTTCTCCTTGAACATATA+TGG | 0.253875 | 1.2:+25475256 | None:intergenic |
| CCCTCTGATCATTCTCTTCA+AGG | 0.258964 | 1.2:-25472994 | MS.gene053320:CDS |
| ACATCTATATCATTGTTAAA+AGG | 0.272063 | 1.2:+25474227 | None:intergenic |
| CAAGTGATGTTTGGATTATC+AGG | 0.272548 | 1.2:+25471269 | None:intergenic |
| CATCTGGCAAAGTATCTTTC+AGG | 0.279149 | 1.2:+25472959 | None:intergenic |
| TCTATAGGGGAAGAAATTAA+TGG | 0.283069 | 1.2:-25473851 | MS.gene053320:intron |
| TGTCCTAACCTTGTTTGATT+TGG | 0.287929 | 1.2:+25473711 | None:intergenic |
| CATGTTCACTGGTATCTTCT+AGG | 0.288006 | 1.2:+25475011 | None:intergenic |
| TGAAGAGAAAATTGTTACTA+TGG | 0.288677 | 1.2:-25471081 | MS.gene053320:CDS |
| GAAAACAAACTGAGCGAAAC+TGG | 0.293120 | 1.2:-25472400 | MS.gene053320:CDS |
| ATCTTTGTCCAAAGATGTTA+TGG | 0.311605 | 1.2:-25476353 | MS.gene053320:CDS |
| GCTTTCATCTGAATCCTTGA+TGG | 0.321397 | 1.2:+25472201 | None:intergenic |
| GAAAGCTACAATTGATTCAT+TGG | 0.324524 | 1.2:-25475681 | MS.gene053320:CDS |
| ACATATATGGCATTAGTAAA+AGG | 0.342779 | 1.2:+25475269 | None:intergenic |
| TCAAGGAGAAACTGCAATCT+TGG | 0.351627 | 1.2:-25475246 | MS.gene053320:CDS |
| TTTGAGTATGGGCAAAGAAA+TGG | 0.353064 | 1.2:-25476613 | None:intergenic |
| CCTTCAACTGATTCAGCATA+TGG | 0.354099 | 1.2:+25473806 | None:intergenic |
| AGCTTTCTCATAAGCATCAT+TGG | 0.358384 | 1.2:+25474805 | None:intergenic |
| GAATATTGAAGATGAAACTA+TGG | 0.360098 | 1.2:-25475801 | MS.gene053320:CDS |
| ACATCTTCAGATTCATCAAT+TGG | 0.365509 | 1.2:+25475470 | None:intergenic |
| TCATGGAAGTGGTATAAATA+TGG | 0.370301 | 1.2:-25476122 | MS.gene053320:CDS |
| TCATGCAAGTGACAGAAGTA+TGG | 0.373078 | 1.2:-25474720 | MS.gene053320:CDS |
| CGAGCTTGAAAGTGATTCAT+TGG | 0.373757 | 1.2:-25475921 | MS.gene053320:CDS |
| GGTTGTGGCCGTGAAACTTT+TGG | 0.375907 | 1.2:+25471877 | None:intergenic |
| ATATCTAAAGCTTCATTCAT+TGG | 0.375973 | 1.2:-25471041 | MS.gene053320:CDS |
| TCGATTCTGGGAAATTCATT+TGG | 0.378262 | 1.2:-25474164 | MS.gene053320:CDS |
| AGCTTTCTCATAACCATCAT+TGG | 0.390108 | 1.2:+25476210 | None:intergenic |
| TGCATCTGACAAGTGATGTT+TGG | 0.400511 | 1.2:+25471260 | None:intergenic |
| TCTGATGAACAATCGATTCT+GGG | 0.401969 | 1.2:-25474176 | MS.gene053320:CDS |
| GAATATTGAAGATGCAACTA+TGG | 0.406564 | 1.2:-25475561 | MS.gene053320:CDS |
| AACAATGATATAGATGTTCA+AGG | 0.412073 | 1.2:-25474221 | MS.gene053320:CDS |
| GGCTTCTGATCATGATCCAT+TGG | 0.413024 | 1.2:-25475225 | MS.gene053320:CDS |
| ACTAATGCCATATATGTTCA+AGG | 0.418629 | 1.2:-25475263 | MS.gene053320:CDS |
| TTGAGTATGGGCAAAGAAAT+GGG | 0.424867 | 1.2:-25476612 | None:intergenic |
| GAAAGCTATAGGACTGGTTT+CGG | 0.427909 | 1.2:-25474384 | MS.gene053320:CDS |
| TGTTGATTGCATACATCAAA+AGG | 0.434361 | 1.2:-25472104 | MS.gene053320:CDS |
| GATATGCCAAGAGGGTCTAA+TGG | 0.436227 | 1.2:-25472289 | MS.gene053320:CDS |
| TAATGAAAGTGGCATAGATA+TGG | 0.438197 | 1.2:-25474450 | MS.gene053320:CDS |
| GATGTTGAGGAGAAAGATAC+AGG | 0.438202 | 1.2:-25475452 | MS.gene053320:CDS |
| AAGTGTACATCATGATGAAA+TGG | 0.439305 | 1.2:-25473025 | MS.gene053320:CDS |
| CTTCTCGTCTTGATTCCATT+CGG | 0.441223 | 1.2:+25471210 | None:intergenic |
| GATGTTCAAGAGGAAGGTTC+AGG | 0.442410 | 1.2:-25475827 | MS.gene053320:CDS |
| GCTTGAAAGTGATTATTCAT+TGG | 0.446746 | 1.2:-25476155 | MS.gene053320:CDS |
| CCATATGCTGAATCAGTTGA+AGG | 0.448127 | 1.2:-25473806 | MS.gene053320:CDS |
| ACATCTTTGGCCTCATCTGT+TGG | 0.448665 | 1.2:+25475986 | None:intergenic |
| GAAGATGCAACAACTGAACT+TGG | 0.449085 | 1.2:-25474632 | MS.gene053320:CDS |
| AGAAGCAATTGAGAAAGAAA+AGG | 0.449686 | 1.2:-25471438 | MS.gene053320:CDS |
| TAAGCAAGATCAATGCATAA+AGG | 0.450479 | 1.2:-25472350 | MS.gene053320:CDS |
| AATTCATCCAAAAGCTGAAA+AGG | 0.451952 | 1.2:-25474690 | MS.gene053320:CDS |
| GGAATCAAGACGAGAAGAAT+CGG | 0.456227 | 1.2:-25471204 | MS.gene053320:CDS |
| TTATCTGATACCGCAAGTAT+TGG | 0.456506 | 1.2:-25472799 | MS.gene053320:CDS |
| ACATCTTTGACCTCATCTGT+TGG | 0.458996 | 1.2:+25474548 | None:intergenic |
| TCTGCTCTACATTTCCCTCC+TGG | 0.460286 | 1.2:+25471900 | None:intergenic |
| TCAGATGATTCCAACGGATA+AGG | 0.468011 | 1.2:-25475720 | MS.gene053320:CDS |
| TCAATGCCTCATGATGAGTA+TGG | 0.475535 | 1.2:-25471110 | MS.gene053320:CDS |
| ACCTGATTTAAGCATGGTTG+TGG | 0.475983 | 1.2:+25471862 | None:intergenic |
| TGTGGCTCATGAAGTTGAAC+CGG | 0.476970 | 1.2:-25472152 | MS.gene053320:CDS |
| GCCACAACCATGCTTAAATC+AGG | 0.480037 | 1.2:-25471863 | MS.gene053320:intron |
| TATCTCATTTGCATGTTCAC+TGG | 0.480368 | 1.2:+25475000 | None:intergenic |
| GATGATCATGAAAGAGCTGC+AGG | 0.481251 | 1.2:-25474317 | MS.gene053320:CDS |
| GATGTTGAAGATAAAGCTAT+AGG | 0.483047 | 1.2:-25474530 | MS.gene053320:CDS |
| TGTGGTGTTAAGCAAATTTG+AGG | 0.484617 | 1.2:-25472026 | MS.gene053320:CDS |
| GGAAATTCATTTGGTGGTGA+AGG | 0.487139 | 1.2:-25474155 | MS.gene053320:intron |
| CTTCCTACCTGATTTAAGCA+TGG | 0.494999 | 1.2:+25471856 | None:intergenic |
| TCAATAGCTGAAGCCAATGA+TGG | 0.495105 | 1.2:-25476223 | MS.gene053320:CDS |
| TGAAAATGAGAATCAGCATC+TGG | 0.495186 | 1.2:+25472943 | None:intergenic |
| GCTACAATTGATTCATTGGA+AGG | 0.498858 | 1.2:-25475677 | MS.gene053320:CDS |
| CAAGGTTGAAAATGATCCAT+TGG | 0.502742 | 1.2:-25474483 | MS.gene053320:CDS |
| GTGTCATCTATTTCACCTAA+AGG | 0.502811 | 1.2:-25470930 | MS.gene053320:CDS |
| ACATCTTTGGCCTTATCCGT+TGG | 0.502931 | 1.2:+25475710 | None:intergenic |
| GCAACATCCTCTTCAGCTGT+TGG | 0.506191 | 1.2:+25476085 | None:intergenic |
| GAAGAAGATGCTCATGGAAG+TGG | 0.506641 | 1.2:-25476133 | MS.gene053320:CDS |
| CTTGAAAGTGATTCATTGGA+AGG | 0.509641 | 1.2:-25475917 | MS.gene053320:CDS |
| GTCTGTGCCATGACTAGAAC+AGG | 0.509770 | 1.2:+25470993 | None:intergenic |
| AGAAGCAGCTTCACTGATAG+TGG | 0.511751 | 1.2:-25471396 | MS.gene053320:CDS |
| TGAAGAGGAAGATGTTCAAG+AGG | 0.511920 | 1.2:-25475837 | MS.gene053320:CDS |
| TCATTAGTATCTCCTTCCAA+TGG | 0.513580 | 1.2:+25474467 | None:intergenic |
| ATATCACTAGAAATGTTTGA+AGG | 0.513580 | 1.2:+25474920 | None:intergenic |
| TTAAATTCTATCAGATGAAG+AGG | 0.513724 | 1.2:-25473112 | MS.gene053320:intron |
| TGAGGAGAAAGCTAAAGGAT+TGG | 0.514538 | 1.2:-25474660 | MS.gene053320:CDS |
| TGCAAAAGAGAGAAGTCAAA+TGG | 0.520464 | 1.2:-25475495 | MS.gene053320:CDS |
| TCTTGGCATATCATAAGTAT+TGG | 0.520683 | 1.2:+25472300 | None:intergenic |
| ATTCTGGGAAATTCATTTGG+TGG | 0.521090 | 1.2:-25474161 | MS.gene053320:CDS |
| CTCGTCTTGATTCCATTCGG+AGG | 0.522495 | 1.2:+25471213 | None:intergenic |
| TGACATGCTAACTATAAATC+CGG | 0.523888 | 1.2:-25471975 | MS.gene053320:CDS |
| CAGTCTCCATTAGACCCTCT+TGG | 0.524359 | 1.2:+25472283 | None:intergenic |
| GAGGAAGATGTTCAAGAGGA+AGG | 0.525270 | 1.2:-25475833 | MS.gene053320:CDS |
| GATGTTGAGGAGAAAGCTAA+AGG | 0.525424 | 1.2:-25474665 | MS.gene053320:CDS |
| AATTCAATATTTGTAAATGG+TGG | 0.526172 | 1.2:-25471338 | MS.gene053320:CDS |
| CGGAGGTTGAGATTGAAGCT+TGG | 0.526966 | 1.2:+25471230 | None:intergenic |
| AGCTGAAAAGGAAGATGTTG+AGG | 0.528213 | 1.2:-25474678 | MS.gene053320:CDS |
| AATGCATCCAACAGCTGAAG+AGG | 0.532756 | 1.2:-25476092 | MS.gene053320:CDS |
| GATGTTGAGGAGAAAGCTAT+AGG | 0.534107 | 1.2:-25474395 | MS.gene053320:CDS |
| TGCACACTATATTGAAAGCA+AGG | 0.537290 | 1.2:-25474501 | MS.gene053320:CDS |
| TGAGTTTGTGAAAGATCTGA+TGG | 0.539560 | 1.2:-25472836 | MS.gene053320:CDS |
| AGTGATATAACAATAGAACT+TGG | 0.543347 | 1.2:-25474905 | MS.gene053320:CDS |
| ACTTGGAAAAGATATACAAC+AGG | 0.544735 | 1.2:-25476293 | MS.gene053320:CDS |
| TTGTCAAGTTCTTCAACTGA+AGG | 0.545727 | 1.2:-25473767 | MS.gene053320:CDS |
| AACAAGTTAGATGGAAGTGA+TGG | 0.547219 | 1.2:-25472862 | MS.gene053320:CDS |
| GAAGGAGATACTAATGAAAG+TGG | 0.547344 | 1.2:-25474461 | MS.gene053320:CDS |
| AGAGCAGACCAAAAGTTTCA+CGG | 0.547609 | 1.2:-25471885 | MS.gene053320:CDS |
| AATGCATCCAAAAGCTGAAG+AGG | 0.550532 | 1.2:-25475612 | MS.gene053320:CDS |
| GTTGATTGCATACATCAAAA+GGG | 0.558551 | 1.2:-25472103 | MS.gene053320:CDS |
| TAAATGGTGGTTATGAAACA+AGG | 0.558662 | 1.2:-25471325 | MS.gene053320:CDS |
| ATTGTTTGAACTTAATTCAG+TGG | 0.559516 | 1.2:+25471358 | None:intergenic |
| GTTGAAAATGATCCATTGGA+AGG | 0.562188 | 1.2:-25474479 | MS.gene053320:CDS |
| TTCATCAGAAGAAGCCAAGA+TGG | 0.564231 | 1.2:+25474190 | None:intergenic |
| GCTTGAAAGTAATTATTCAT+CGG | 0.567246 | 1.2:-25474750 | MS.gene053320:CDS |
| ATTTCATCATGATGTACACT+TGG | 0.570715 | 1.2:+25473027 | None:intergenic |
| ACATAAATATAGAGAATCAA+AGG | 0.572282 | 1.2:-25475871 | MS.gene053320:CDS |
| AATAACACTTCTGCTATCAA+AGG | 0.574264 | 1.2:-25476585 | MS.gene053320:intron |
| TGATCTTGCTTACAATCCTG+TGG | 0.574741 | 1.2:+25472361 | None:intergenic |
| AAGGCATCCAAAAGATGAAG+AGG | 0.578335 | 1.2:-25475852 | MS.gene053320:CDS |
| CAGACACAAGATAACAATGA+TGG | 0.579292 | 1.2:-25470975 | MS.gene053320:CDS |
| TCTGAAGACTTATCAAGCAA+TGG | 0.583115 | 1.2:+25471173 | None:intergenic |
| GCCTTGAAGAGAATGATCAG+AGG | 0.584442 | 1.2:+25472993 | None:intergenic |
| AGAAGCTCCTGTTCTAGTCA+TGG | 0.584849 | 1.2:-25471000 | MS.gene053320:CDS |
| AGATGATAGCTTGTCAAACA+AGG | 0.589755 | 1.2:-25471153 | MS.gene053320:CDS |
| GCTGCAGGGTTGAGTTCTGA+TGG | 0.593083 | 1.2:-25474302 | MS.gene053320:CDS |
| CCTTGAAGAGAATGATCAGA+GGG | 0.593771 | 1.2:+25472994 | None:intergenic |
| CTTCAATCTCAACCTCCGAA+TGG | 0.594382 | 1.2:-25471225 | MS.gene053320:CDS |
| ATGCTTATGAGAAAGCTACA+TGG | 0.595416 | 1.2:-25474799 | MS.gene053320:CDS |
| TGAGGAGAAAGCTATAGGAC+TGG | 0.606020 | 1.2:-25474390 | MS.gene053320:CDS |
| GCATCATGAGCATCTTCTTG+TGG | 0.606472 | 1.2:+25474872 | None:intergenic |
| AAATTTGCTTAACACCACAT+AGG | 0.608181 | 1.2:+25472030 | None:intergenic |
| TCATGTCAGTAACTCCATCA+AGG | 0.608798 | 1.2:-25472215 | MS.gene053320:CDS |
| ATCAACAAATGAGAGTCCAC+AGG | 0.612516 | 1.2:-25472377 | MS.gene053320:CDS |
| TGATGAATCTGAAGATGTTG+AGG | 0.618336 | 1.2:-25475465 | MS.gene053320:CDS |
| TCATTGGAAGAAGATGCTCA+TGG | 0.618970 | 1.2:-25476139 | MS.gene053320:CDS |
| TGATGAAGCTGAAGATGTTG+AGG | 0.624189 | 1.2:-25474408 | MS.gene053320:CDS |
| GTTGCATATCTATAAATACC+AGG | 0.627274 | 1.2:-25471918 | MS.gene053320:CDS |
| ATCAGATGAAGAGGAAACAT+CGG | 0.628754 | 1.2:-25473103 | MS.gene053320:intron |
| TCAAATGATTCCAACAGATG+AGG | 0.632582 | 1.2:-25474558 | MS.gene053320:CDS |
| CAACAATGAAGAAAAGTGCA+AGG | 0.636587 | 1.2:-25472770 | MS.gene053320:intron |
| TCAGATGATTCCAACAGATG+AGG | 0.640886 | 1.2:-25475996 | MS.gene053320:CDS |
| TCAAGAAGAAAACAATCATG+TGG | 0.642703 | 1.2:-25472170 | MS.gene053320:CDS |
| AAAGACAGAATCTTCCTATG+TGG | 0.642904 | 1.2:-25472044 | MS.gene053320:CDS |
| AAACAAGGGACAGTGTAACA+AGG | 0.644641 | 1.2:-25471310 | MS.gene053320:CDS |
| CATATCTATAAATACCAGGA+GGG | 0.645811 | 1.2:-25471914 | MS.gene053320:CDS |
| AGTTACTGACATGAGCATCA+AGG | 0.645907 | 1.2:+25472224 | None:intergenic |
| GACTCATGCCAAATCAAACA+AGG | 0.646650 | 1.2:-25473719 | MS.gene053320:intron |
| ATGAGACCATACTCATCATG+AGG | 0.647120 | 1.2:+25471104 | None:intergenic |
| TGAGGAGAAAGATACAGGAA+TGG | 0.648608 | 1.2:-25475447 | MS.gene053320:CDS |
| GAGAAGTCAGATGATTCCAA+CGG | 0.650472 | 1.2:-25475726 | MS.gene053320:CDS |
| ATACTTATGATATGCCAAGA+GGG | 0.657168 | 1.2:-25472297 | MS.gene053320:CDS |
| ATGATCATGAAAGAGCTGCA+GGG | 0.664654 | 1.2:-25474316 | MS.gene053320:CDS |
| TAGTAACAAAGTTGAAGACA+CGG | 0.669379 | 1.2:-25472071 | MS.gene053320:CDS |
| TTCTTCAACTGAAGGCAGTG+AGG | 0.676536 | 1.2:-25473759 | MS.gene053320:CDS |
| AAATGGTGGTTATGAAACAA+GGG | 0.678393 | 1.2:-25471324 | MS.gene053320:CDS |
| GAAAAGAAAAGCGCAAATTG+CGG | 0.678461 | 1.2:-25470908 | MS.gene053320:CDS |
| GTTGTTGATGCCAATACTTG+CGG | 0.680615 | 1.2:+25472789 | None:intergenic |
| AATACTTATGATATGCCAAG+AGG | 0.685636 | 1.2:-25472298 | MS.gene053320:CDS |
| TCAAGAGTACAAGTCTGACA+TGG | 0.703481 | 1.2:-25472323 | MS.gene053320:CDS |
| GCATATCTATAAATACCAGG+AGG | 0.706115 | 1.2:-25471915 | MS.gene053320:CDS |
| TCGCTGCAAGAAGAAAATCA+CGG | 0.724115 | 1.2:-25476040 | MS.gene053320:CDS |
| ATGGTTATGAGAAAGCTACG+CGG | 0.811064 | 1.2:-25476204 | MS.gene053320:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATCATATTATTTTCATATA+AGG | + | chr1.2:25474186-25474205 | None:intergenic | 10.0% |
| !! | AACAATTCAATATTTGTAAA+TGG | - | chr1.2:25476125-25476144 | MS.gene053320:CDS | 15.0% |
| !! | AATGAGATAATAAATAGTTA+AGG | - | chr1.2:25473454-25473473 | MS.gene053320:intron | 15.0% |
| !! | ACTTATTTGAACTTATTTAT+TGG | - | chr1.2:25473854-25473873 | MS.gene053320:intron | 15.0% |
| !!! | AATTTTTATATCACTAGAAA+TGG | + | chr1.2:25471151-25471170 | None:intergenic | 15.0% |
| !!! | TTAATTTTTCATTTTTGTAG+AGG | - | chr1.2:25472398-25472417 | MS.gene053320:CDS | 15.0% |
| !! | AATTCAATATTTGTAAATGG+TGG | - | chr1.2:25476128-25476147 | MS.gene053320:CDS | 20.0% |
| !! | ACATAAATATAGAGAATCAA+AGG | - | chr1.2:25471595-25471614 | MS.gene053320:intron | 20.0% |
| !! | ACATCTATATCATTGTTAAA+AGG | + | chr1.2:25473242-25473261 | None:intergenic | 20.0% |
| !! | AGTGATATAAAAATTGAACT+TGG | - | chr1.2:25471156-25471175 | MS.gene053320:CDS | 20.0% |
| !! | ATATTGTTAGAAAGTAAACA+TGG | + | chr1.2:25475683-25475702 | None:intergenic | 20.0% |
| !! | ATTAAATTGTTTATCGAAAC+AGG | - | chr1.2:25475032-25475051 | MS.gene053320:CDS | 20.0% |
| !! | TCATAAGTAACAAAATTTCT+TGG | - | chr1.2:25473498-25473517 | MS.gene053320:intron | 20.0% |
| !!! | AAAATATAAGCGATTTTCAT+TGG | + | chr1.2:25474800-25474819 | None:intergenic | 20.0% |
| !!! | AAAGAATTTTTCAAATCCAA+TGG | + | chr1.2:25472260-25472279 | None:intergenic | 20.0% |
| !!! | AGAAATTTTGTTACTTATGA+TGG | + | chr1.2:25473498-25473517 | None:intergenic | 20.0% |
| !!! | TATCAATATTTTCAATAGTG+TGG | - | chr1.2:25473785-25473804 | MS.gene053320:CDS | 20.0% |
| !!! | TTTTATTCAAACAAGTTAGA+TGG | - | chr1.2:25474595-25474614 | MS.gene053320:CDS | 20.0% |
| ! | AACAATGATATAGATGTTCA+AGG | - | chr1.2:25473245-25473264 | MS.gene053320:intron | 25.0% |
| ! | ACATATATGGCATTAGTAAA+AGG | + | chr1.2:25472200-25472219 | None:intergenic | 25.0% |
| ! | AGTGATATAACAATAGAACT+TGG | - | chr1.2:25472561-25472580 | MS.gene053320:intron | 25.0% |
| ! | ATATCACTAGAAATGTTTGA+AGG | + | chr1.2:25472549-25472568 | None:intergenic | 25.0% |
| ! | ATTGTTTGAACTTAATTCAG+TGG | + | chr1.2:25476111-25476130 | None:intergenic | 25.0% |
| ! | GAAGATGAAGATAAAAATGA+TGG | - | chr1.2:25473203-25473222 | MS.gene053320:intron | 25.0% |
| ! | GAATATTGAAGATGAAACTA+TGG | - | chr1.2:25471665-25471684 | MS.gene053320:intron | 25.0% |
| ! | GCTTGAAAGTAATTATTCAT+CGG | - | chr1.2:25472716-25472735 | MS.gene053320:intron | 25.0% |
| ! | TAACAATGATGGTTCAAAAA+TGG | - | chr1.2:25476502-25476521 | MS.gene053320:intron | 25.0% |
| ! | TAAGATATTTCAATCCAAAC+AGG | + | chr1.2:25474731-25474750 | None:intergenic | 25.0% |
| ! | TACTATAAACTACCAAGAAT+AGG | - | chr1.2:25474142-25474161 | MS.gene053320:intron | 25.0% |
| ! | TGAAGAGAAAATTGTTACTA+TGG | - | chr1.2:25476385-25476404 | MS.gene053320:CDS | 25.0% |
| ! | TGATGTTTCAGAAAAATATG+TGG | - | chr1.2:25474558-25474577 | MS.gene053320:CDS | 25.0% |
| ! | TTAAATTCTATCAGATGAAG+AGG | - | chr1.2:25474354-25474373 | MS.gene053320:CDS | 25.0% |
| ! | TTATCTTCCTCTACAAAAAA+TGG | + | chr1.2:25471003-25471022 | None:intergenic | 25.0% |
| !! | ACTTATGATGGAATTTCTTT+CGG | + | chr1.2:25473486-25473505 | None:intergenic | 25.0% |
| !! | ATATCTAAAGCTTCATTCAT+TGG | - | chr1.2:25476425-25476444 | MS.gene053320:CDS | 25.0% |
| !! | CTTGAAAATGAGTTTTTGAA+AGG | - | chr1.2:25472065-25472084 | MS.gene053320:CDS | 25.0% |
| !! | GATTTGAAAAATTCTTTTGC+TGG | - | chr1.2:25472263-25472282 | MS.gene053320:CDS | 25.0% |
| !! | GTTTGTGATTTTGTTCTATA+GGG | - | chr1.2:25473601-25473620 | MS.gene053320:intron | 25.0% |
| !! | TCAATTTTTACCTTGTATGT+GGG | - | chr1.2:25475705-25475724 | MS.gene053320:CDS | 25.0% |
| !! | TGGAATCTTTCAAGTATATA+TGG | + | chr1.2:25473812-25473831 | None:intergenic | 25.0% |
| !! | TGTTTGTGATTTTGTTCTAT+AGG | - | chr1.2:25473600-25473619 | MS.gene053320:intron | 25.0% |
| !! | TTCAATTTTTACCTTGTATG+TGG | - | chr1.2:25475704-25475723 | MS.gene053320:CDS | 25.0% |
| !! | TTTGTGATTTTGTTCTATAG+GGG | - | chr1.2:25473602-25473621 | MS.gene053320:intron | 25.0% |
| !!! | AGTTTGATTTTGTAACCTAA+AGG | + | chr1.2:25474893-25474912 | None:intergenic | 25.0% |
| !!! | TTATTTGCCATTTTTTGTAG+AGG | - | chr1.2:25470993-25471012 | MS.gene053320:CDS | 25.0% |
| AAACATTTGTGAGACTGTTT+GGG | - | chr1.2:25473880-25473899 | MS.gene053320:intron | 30.0% | |
| AAACTACCAAGAATAGGTTA+TGG | - | chr1.2:25474148-25474167 | MS.gene053320:intron | 30.0% | |
| AAATGGTGGTTATGAAACAA+GGG | - | chr1.2:25476142-25476161 | MS.gene053320:CDS | 30.0% | |
| AAGTGTACATCATGATGAAA+TGG | - | chr1.2:25474441-25474460 | MS.gene053320:CDS | 30.0% | |
| AATAACACTTCTGCTATCAA+AGG | - | chr1.2:25470881-25470900 | MS.gene053320:CDS | 30.0% | |
| AATACTTATGATATGCCAAG+AGG | - | chr1.2:25475168-25475187 | MS.gene053320:intron | 30.0% | |
| AATTCATCCAAAAGCTGAAA+AGG | - | chr1.2:25472776-25472795 | MS.gene053320:CDS | 30.0% | |
| ACAAAATTTCTTGGTTGTGT+TGG | - | chr1.2:25473507-25473526 | MS.gene053320:intron | 30.0% | |
| ACAAGTAAAAAGGAATGAAG+GGG | - | chr1.2:25473542-25473561 | MS.gene053320:intron | 30.0% | |
| ACATCTTCAGATTCATCAAT+TGG | + | chr1.2:25471999-25472018 | None:intergenic | 30.0% | |
| ACTAATGCCATATATGTTCA+AGG | - | chr1.2:25472203-25472222 | MS.gene053320:CDS | 30.0% | |
| ACTTGGAAAAGATATACAAC+AGG | - | chr1.2:25471173-25471192 | MS.gene053320:CDS | 30.0% | |
| AGAAGCAATTGAGAAAGAAA+AGG | - | chr1.2:25476028-25476047 | MS.gene053320:CDS | 30.0% | |
| AGTTTCTCCTTGAACATATA+TGG | + | chr1.2:25472213-25472232 | None:intergenic | 30.0% | |
| ATACTTATGATATGCCAAGA+GGG | - | chr1.2:25475169-25475188 | MS.gene053320:intron | 30.0% | |
| ATACTTGAAAGATTCCAGAT+TGG | - | chr1.2:25473815-25473834 | MS.gene053320:CDS | 30.0% | |
| ATCTTTGTCCAAAGATGTTA+TGG | - | chr1.2:25471113-25471132 | MS.gene053320:CDS | 30.0% | |
| ATTTCATCATGATGTACACT+TGG | + | chr1.2:25474442-25474461 | None:intergenic | 30.0% | |
| CATATCTATAAATACCAGGA+GGG | - | chr1.2:25475552-25475571 | MS.gene053320:CDS | 30.0% | |
| CATTCTATTCATTTCTCTCT+CGG | + | chr1.2:25473438-25473457 | None:intergenic | 30.0% | |
| CATTTCTACCCAAAATCTTA+AGG | - | chr1.2:25475809-25475828 | MS.gene053320:CDS | 30.0% | |
| GAATATTGAAGATGCAACTA+TGG | - | chr1.2:25471905-25471924 | MS.gene053320:CDS | 30.0% | |
| GACAAGTAAAAAGGAATGAA+GGG | - | chr1.2:25473541-25473560 | MS.gene053320:intron | 30.0% | |
| GATGTTGAAGATAAAGCTAT+AGG | - | chr1.2:25472936-25472955 | MS.gene053320:CDS | 30.0% | |
| GCTTGAAAGTGATTATTCAT+TGG | - | chr1.2:25471311-25471330 | MS.gene053320:CDS | 30.0% | |
| GTTCAACAAAACATTAACCA+CGG | - | chr1.2:25473387-25473406 | MS.gene053320:intron | 30.0% | |
| GTTGATTGCATACATCAAAA+GGG | - | chr1.2:25475363-25475382 | MS.gene053320:CDS | 30.0% | |
| GTTGCATATCTATAAATACC+AGG | - | chr1.2:25475548-25475567 | MS.gene053320:CDS | 30.0% | |
| TAAACATTTGTGAGACTGTT+TGG | - | chr1.2:25473879-25473898 | MS.gene053320:intron | 30.0% | |
| TAAATGGTGGTTATGAAACA+AGG | - | chr1.2:25476141-25476160 | MS.gene053320:CDS | 30.0% | |
| TAAGCAAGATCAATGCATAA+AGG | - | chr1.2:25475116-25475135 | MS.gene053320:intron | 30.0% | |
| TAATGAAAGTGGCATAGATA+TGG | - | chr1.2:25473016-25473035 | MS.gene053320:CDS | 30.0% | |
| TAGTAACAAAGTTGAAGACA+CGG | - | chr1.2:25475395-25475414 | MS.gene053320:CDS | 30.0% | |
| TCAAATAAGTCGATCCAAAT+AGG | + | chr1.2:25473844-25473863 | None:intergenic | 30.0% | |
| TCAAGAAGAAAACAATCATG+TGG | - | chr1.2:25475296-25475315 | MS.gene053320:CDS | 30.0% | |
| TCATGGAAGTGGTATAAATA+TGG | - | chr1.2:25471344-25471363 | MS.gene053320:CDS | 30.0% | |
| TCTATAGGGGAAGAAATTAA+TGG | - | chr1.2:25473615-25473634 | MS.gene053320:intron | 30.0% | |
| TCTTGGCATATCATAAGTAT+TGG | + | chr1.2:25475169-25475188 | None:intergenic | 30.0% | |
| TGACATGCTAACTATAAATC+CGG | - | chr1.2:25475491-25475510 | MS.gene053320:CDS | 30.0% | |
| TGCAAAGAAAAAGATTCTTC+CGG | + | chr1.2:25475513-25475532 | None:intergenic | 30.0% | |
| TGTGTAAACGACAAGTAAAA+AGG | - | chr1.2:25473532-25473551 | MS.gene053320:intron | 30.0% | |
| ! | AAAAATTCTTTTGCTGGTGA+AGG | - | chr1.2:25472269-25472288 | MS.gene053320:CDS | 30.0% |
| ! | AAATTTGCTTAACACCACAT+AGG | + | chr1.2:25475439-25475458 | None:intergenic | 30.0% |
| ! | ACATCTTTGGACAAAGATTT+TGG | + | chr1.2:25471111-25471130 | None:intergenic | 30.0% |
| ! | GAAAGCTACAATTGATTCAT+TGG | - | chr1.2:25471785-25471804 | MS.gene053320:intron | 30.0% |
| ! | TCTGAAAGCCTTAAGATTTT+GGG | + | chr1.2:25475820-25475839 | None:intergenic | 30.0% |
| ! | TGATTTTGTAACCTAAAGGA+TGG | + | chr1.2:25474889-25474908 | None:intergenic | 30.0% |
| ! | TGTTGATTGCATACATCAAA+AGG | - | chr1.2:25475362-25475381 | MS.gene053320:CDS | 30.0% |
| !! | AGCTTTTTCCATAACATCTT+TGG | + | chr1.2:25471124-25471143 | None:intergenic | 30.0% |
| !! | GTCATTTTCTTCAACATCTT+TGG | + | chr1.2:25471496-25471515 | None:intergenic | 30.0% |
| !! | TAAGATTTTGGGTAGAAATG+AGG | + | chr1.2:25475809-25475828 | None:intergenic | 30.0% |
| !! | TCAGTTTGTTTTCTTCGTTA+AGG | + | chr1.2:25475059-25475078 | None:intergenic | 30.0% |
| !!! | TAGTTTTATTGATAAAGCCG+TGG | + | chr1.2:25473407-25473426 | None:intergenic | 30.0% |
| AAAGACAGAATCTTCCTATG+TGG | - | chr1.2:25475422-25475441 | MS.gene053320:CDS | 35.0% | |
| AACAAGTTAGATGGAAGTGA+TGG | - | chr1.2:25474604-25474623 | MS.gene053320:CDS | 35.0% | |
| AACCCTTAAAGCCTATTACT+TGG | - | chr1.2:25474048-25474067 | MS.gene053320:intron | 35.0% | |
| AAGACGAAAAACAAAAGCGA+CGG | + | chr1.2:25472356-25472375 | None:intergenic | 35.0% | |
| ACAATTGAGATGCTACATCA+AGG | - | chr1.2:25474916-25474935 | MS.gene053320:CDS | 35.0% | |
| AGCTTTCTCATAACCATCAT+TGG | + | chr1.2:25471259-25471278 | None:intergenic | 35.0% | |
| AGCTTTCTCATAAGCATCAT+TGG | + | chr1.2:25472664-25472683 | None:intergenic | 35.0% | |
| AGCTTTCTCTTGAACATCTT+TGG | + | chr1.2:25471772-25471791 | None:intergenic | 35.0% | |
| AGGTTTCAACAATGAAATCC+AGG | + | chr1.2:25474281-25474300 | None:intergenic | 35.0% | |
| ATCAGATGAAGAGGAAACAT+CGG | - | chr1.2:25474363-25474382 | MS.gene053320:CDS | 35.0% | |
| ATCCAAATAGGTTTCCAATC+TGG | + | chr1.2:25473832-25473851 | None:intergenic | 35.0% | |
| ATGCCAAATCAAACAAGGTT+AGG | - | chr1.2:25473752-25473771 | MS.gene053320:CDS | 35.0% | |
| ATGCTTATGAGAAAGCTACA+TGG | - | chr1.2:25472667-25472686 | MS.gene053320:intron | 35.0% | |
| CAAAATCTTAAGGCTTTCAG+AGG | - | chr1.2:25475819-25475838 | MS.gene053320:CDS | 35.0% | |
| CAAGGTTGAAAATGATCCAT+TGG | - | chr1.2:25472983-25473002 | MS.gene053320:CDS | 35.0% | |
| CAAGTAAAAAGGAATGAAGG+GGG | - | chr1.2:25473543-25473562 | MS.gene053320:intron | 35.0% | |
| CAAGTGATGTTTGGATTATC+AGG | + | chr1.2:25476200-25476219 | None:intergenic | 35.0% | |
| CAGACACAAGATAACAATGA+TGG | - | chr1.2:25476491-25476510 | MS.gene053320:intron | 35.0% | |
| CGACAAGTAAAAAGGAATGA+AGG | - | chr1.2:25473540-25473559 | MS.gene053320:intron | 35.0% | |
| CTGTTTCCATAACCTATTCT+TGG | + | chr1.2:25474157-25474176 | None:intergenic | 35.0% | |
| CTTGAAAGTGATTCATTGGA+AGG | - | chr1.2:25471549-25471568 | MS.gene053320:intron | 35.0% | |
| GAAGGAGATACTAATGAAAG+TGG | - | chr1.2:25473005-25473024 | MS.gene053320:CDS | 35.0% | |
| GATCCTGCAATAAGAAAAAC+CGG | + | chr1.2:25475336-25475355 | None:intergenic | 35.0% | |
| GCATATCTATAAATACCAGG+AGG | - | chr1.2:25475551-25475570 | MS.gene053320:CDS | 35.0% | |
| GTGTCATCTATTTCACCTAA+AGG | - | chr1.2:25476536-25476555 | MS.gene053320:intron | 35.0% | |
| GTTGAAAATGATCCATTGGA+AGG | - | chr1.2:25472987-25473006 | MS.gene053320:CDS | 35.0% | |
| TAACTTGAGCTCCAAGTAAT+AGG | + | chr1.2:25474062-25474081 | None:intergenic | 35.0% | |
| TAATACCATTCCAGCTGTTA+GGG | + | chr1.2:25475913-25475932 | None:intergenic | 35.0% | |
| TATCTCATTTGCATGTTCAC+TGG | + | chr1.2:25472469-25472488 | None:intergenic | 35.0% | |
| TCAAATGATTCCAACAGATG+AGG | - | chr1.2:25472908-25472927 | MS.gene053320:CDS | 35.0% | |
| TCAAGGAAAAACTACCATCT+TGG | - | chr1.2:25473262-25473281 | MS.gene053320:intron | 35.0% | |
| TCATTAGTATCTCCTTCCAA+TGG | + | chr1.2:25473002-25473021 | None:intergenic | 35.0% | |
| TCTGAAGACTTATCAAGCAA+TGG | + | chr1.2:25476296-25476315 | None:intergenic | 35.0% | |
| TGAAAATGAGAATCAGCATC+TGG | + | chr1.2:25474526-25474545 | None:intergenic | 35.0% | |
| TGAGTTTGTGAAAGATCTGA+TGG | - | chr1.2:25474630-25474649 | MS.gene053320:CDS | 35.0% | |
| TGATGAATCTGAAGATGTTG+AGG | - | chr1.2:25472001-25472020 | MS.gene053320:CDS | 35.0% | |
| TGCAAAAGAGAGAAGTCAAA+TGG | - | chr1.2:25471971-25471990 | MS.gene053320:CDS | 35.0% | |
| TGCACACTATATTGAAAGCA+AGG | - | chr1.2:25472965-25472984 | MS.gene053320:CDS | 35.0% | |
| TGGTTCAAAAATGGAAGTGA+AGG | - | chr1.2:25476511-25476530 | MS.gene053320:intron | 35.0% | |
| TGTTTACGTCTCTGACAATT+AGG | + | chr1.2:25474301-25474320 | None:intergenic | 35.0% | |
| TTATCTGATACCGCAAGTAT+TGG | - | chr1.2:25474667-25474686 | MS.gene053320:CDS | 35.0% | |
| TTCCAGATTGGAAACCTATT+TGG | - | chr1.2:25473827-25473846 | MS.gene053320:CDS | 35.0% | |
| TTGACATGCATTATTCTGAG+AGG | + | chr1.2:25472310-25472329 | None:intergenic | 35.0% | |
| TTGTCAAGTTCTTCAACTGA+AGG | - | chr1.2:25473699-25473718 | MS.gene053320:intron | 35.0% | |
| TTGTTTATCCAAACAAAGCC+TGG | - | chr1.2:25474260-25474279 | MS.gene053320:CDS | 35.0% | |
| ! | AAGAAAAGTGCAAGGTACTT+AGG | - | chr1.2:25474704-25474723 | MS.gene053320:CDS | 35.0% |
| ! | ACATCTTCCTCTTCATCTTT+TGG | + | chr1.2:25471624-25471643 | None:intergenic | 35.0% |
| ! | ACATCTTCCTTTTCAGCTTT+TGG | + | chr1.2:25472786-25472805 | None:intergenic | 35.0% |
| ! | AGAAAAGTGCAAGGTACTTA+GGG | - | chr1.2:25474705-25474724 | MS.gene053320:CDS | 35.0% |
| ! | AGATGATAGCTTGTCAAACA+AGG | - | chr1.2:25476313-25476332 | MS.gene053320:CDS | 35.0% |
| ! | ATTCTGGGAAATTCATTTGG+TGG | - | chr1.2:25473305-25473324 | MS.gene053320:intron | 35.0% |
| ! | ATTTTTACCTTGTATGTGGG+TGG | - | chr1.2:25475708-25475727 | MS.gene053320:CDS | 35.0% |
| ! | CAACAATGAAGAAAAGTGCA+AGG | - | chr1.2:25474696-25474715 | MS.gene053320:CDS | 35.0% |
| ! | CTCCAAGTAATAGGCTTTAA+GGG | + | chr1.2:25474053-25474072 | None:intergenic | 35.0% |
| ! | GAAAAGAAAAGCGCAAATTG+CGG | - | chr1.2:25476558-25476577 | MS.gene053320:intron | 35.0% |
| ! | GCTACAATTGATTCATTGGA+AGG | - | chr1.2:25471789-25471808 | MS.gene053320:intron | 35.0% |
| ! | TCGATTCTGGGAAATTCATT+TGG | - | chr1.2:25473302-25473321 | MS.gene053320:intron | 35.0% |
| ! | TCTGATGAACAATCGATTCT+GGG | - | chr1.2:25473290-25473309 | MS.gene053320:intron | 35.0% |
| ! | TGTCCTAACCTTGTTTGATT+TGG | + | chr1.2:25473758-25473777 | None:intergenic | 35.0% |
| ! | TGTGGTGTTAAGCAAATTTG+AGG | - | chr1.2:25475440-25475459 | MS.gene053320:CDS | 35.0% |
| ! | TTCTGATGAACAATCGATTC+TGG | - | chr1.2:25473289-25473308 | MS.gene053320:intron | 35.0% |
| ! | TTGCGCTTTTCTTTTCCTTT+AGG | + | chr1.2:25476554-25476573 | None:intergenic | 35.0% |
| !! | AAGAGCACCATAACATACTA+TGG | - | chr1.2:25473998-25474017 | MS.gene053320:intron | 35.0% |
| !! | AATGAAATCCAGGCTTTGTT+TGG | + | chr1.2:25474271-25474290 | None:intergenic | 35.0% |
| !! | CTCTGAAAGCCTTAAGATTT+TGG | + | chr1.2:25475821-25475840 | None:intergenic | 35.0% |
| !! | TTTATTTTCACAAGCTCTCC+AGG | - | chr1.2:25474770-25474789 | MS.gene053320:CDS | 35.0% |
| !!! | TTTTTTAGCCGAAGACGTTA+CGG | - | chr1.2:25472518-25472537 | MS.gene053320:intron | 35.0% |
| AAACAAGGGACAGTGTAACA+AGG | - | chr1.2:25476156-25476175 | MS.gene053320:CDS | 40.0% | |
| AACAAAAGCGACGGGTAAAA+AGG | + | chr1.2:25472347-25472366 | None:intergenic | 40.0% | |
| AAGAACGAGCTAAATGATCC+TGG | - | chr1.2:25475764-25475783 | MS.gene053320:CDS | 40.0% | |
| AATGCATCCAAAAGCTGAAG+AGG | - | chr1.2:25471854-25471873 | MS.gene053320:intron | 40.0% | |
| ACATCTTTGACCTCATCTGT+TGG | + | chr1.2:25472921-25472940 | None:intergenic | 40.0% | |
| ACCTGATTTAAGCATGGTTG+TGG | + | chr1.2:25475607-25475626 | None:intergenic | 40.0% | |
| ACGTCTTCGGCTAAAAAAGT+TGG | + | chr1.2:25472516-25472535 | None:intergenic | 40.0% | |
| AGACGAAAAACAAAAGCGAC+GGG | + | chr1.2:25472355-25472374 | None:intergenic | 40.0% | |
| AGAGCAGACCAAAAGTTTCA+CGG | - | chr1.2:25475581-25475600 | MS.gene053320:CDS | 40.0% | |
| AGCTGAAAAGGAAGATGTTG+AGG | - | chr1.2:25472788-25472807 | MS.gene053320:CDS | 40.0% | |
| AGTTACTGACATGAGCATCA+AGG | + | chr1.2:25475245-25475264 | None:intergenic | 40.0% | |
| ATCAACAAATGAGAGTCCAC+AGG | - | chr1.2:25475089-25475108 | MS.gene053320:intron | 40.0% | |
| ATGAGACCATACTCATCATG+AGG | + | chr1.2:25476365-25476384 | None:intergenic | 40.0% | |
| ATGATCATGAAAGAGCTGCA+GGG | - | chr1.2:25473150-25473169 | MS.gene053320:intron | 40.0% | |
| ATGGTTATGAGAAAGCTACG+CGG | - | chr1.2:25471262-25471281 | MS.gene053320:CDS | 40.0% | |
| ATTCAGAACCACTGAGAGAT+CGG | + | chr1.2:25475856-25475875 | None:intergenic | 40.0% | |
| CAACCATGCTTAAATCAGGT+AGG | - | chr1.2:25475607-25475626 | MS.gene053320:CDS | 40.0% | |
| CACCATAACATACTATGGAC+TGG | - | chr1.2:25474003-25474022 | MS.gene053320:intron | 40.0% | |
| CATGTTCACTGGTATCTTCT+AGG | + | chr1.2:25472458-25472477 | None:intergenic | 40.0% | |
| CCATATGCTGAATCAGTTGA+AGG | - | chr1.2:25473660-25473679 | MS.gene053320:intron | 40.0% | |
| CCTTGAAGAGAATGATCAGA+GGG | + | chr1.2:25474475-25474494 | None:intergenic | 40.0% | |
| CGAGCTTGAAAGTGATTCAT+TGG | - | chr1.2:25471545-25471564 | MS.gene053320:intron | 40.0% | |
| CTAACAGCTGGAATGGTATT+AGG | - | chr1.2:25475912-25475931 | MS.gene053320:CDS | 40.0% | |
| CTAATACCATTCCAGCTGTT+AGG | + | chr1.2:25475914-25475933 | None:intergenic | 40.0% | |
| CTTCCTACCTGATTTAAGCA+TGG | + | chr1.2:25475613-25475632 | None:intergenic | 40.0% | |
| CTTCTCGTCTTGATTCCATT+CGG | + | chr1.2:25476259-25476278 | None:intergenic | 40.0% | |
| GAAAACAAACTGAGCGAAAC+TGG | - | chr1.2:25475066-25475085 | MS.gene053320:intron | 40.0% | |
| GAAGATGCAACAACTGAACT+TGG | - | chr1.2:25472834-25472853 | MS.gene053320:CDS | 40.0% | |
| GACTCATGCCAAATCAAACA+AGG | - | chr1.2:25473747-25473766 | MS.gene053320:CDS | 40.0% | |
| GAGAAGTCAGATGATTCCAA+CGG | - | chr1.2:25471740-25471759 | MS.gene053320:intron | 40.0% | |
| GATGTTGAGGAGAAAGATAC+AGG | - | chr1.2:25472014-25472033 | MS.gene053320:CDS | 40.0% | |
| GATGTTGAGGAGAAAGCTAA+AGG | - | chr1.2:25472801-25472820 | MS.gene053320:CDS | 40.0% | |
| GATGTTGAGGAGAAAGCTAT+AGG | - | chr1.2:25473071-25473090 | MS.gene053320:CDS | 40.0% | |
| GCTCCAAGTAATAGGCTTTA+AGG | + | chr1.2:25474054-25474073 | None:intergenic | 40.0% | |
| GCTTTCATCTGAATCCTTGA+TGG | + | chr1.2:25475268-25475287 | None:intergenic | 40.0% | |
| GGAATCAAGACGAGAAGAAT+CGG | - | chr1.2:25476262-25476281 | MS.gene053320:CDS | 40.0% | |
| GGATTTGAACTCCATCCTTT+AGG | - | chr1.2:25474875-25474894 | MS.gene053320:CDS | 40.0% | |
| GTTGTTGATGCCAATACTTG+CGG | + | chr1.2:25474680-25474699 | None:intergenic | 40.0% | |
| TCAAGGAGAAACTGCAATCT+TGG | - | chr1.2:25472220-25472239 | MS.gene053320:CDS | 40.0% | |
| TCAATAGCTGAAGCCAATGA+TGG | - | chr1.2:25471243-25471262 | MS.gene053320:CDS | 40.0% | |
| TCAATGCCTCATGATGAGTA+TGG | - | chr1.2:25476356-25476375 | MS.gene053320:CDS | 40.0% | |
| TCAGATGATTCCAACAGATG+AGG | - | chr1.2:25471470-25471489 | MS.gene053320:intron | 40.0% | |
| TCAGATGATTCCAACGGATA+AGG | - | chr1.2:25471746-25471765 | MS.gene053320:intron | 40.0% | |
| TCATGCAAGTGACAGAAGTA+TGG | - | chr1.2:25472746-25472765 | MS.gene053320:intron | 40.0% | |
| TCATGTCAGTAACTCCATCA+AGG | - | chr1.2:25475251-25475270 | MS.gene053320:CDS | 40.0% | |
| TCATTGGAAGAAGATGCTCA+TGG | - | chr1.2:25471327-25471346 | MS.gene053320:CDS | 40.0% | |
| TCGCTGCAAGAAGAAAATCA+CGG | - | chr1.2:25471426-25471445 | MS.gene053320:CDS | 40.0% | |
| TGAAGAGGAAGATGTTCAAG+AGG | - | chr1.2:25471629-25471648 | MS.gene053320:intron | 40.0% | |
| TGAGGAGAAAGATACAGGAA+TGG | - | chr1.2:25472019-25472038 | MS.gene053320:CDS | 40.0% | |
| TGAGGAGAAAGCTAAAGGAT+TGG | - | chr1.2:25472806-25472825 | MS.gene053320:CDS | 40.0% | |
| TGATCTTGCTTACAATCCTG+TGG | + | chr1.2:25475108-25475127 | None:intergenic | 40.0% | |
| TGATGAAGCTGAAGATGTTG+AGG | - | chr1.2:25473058-25473077 | MS.gene053320:CDS | 40.0% | |
| TGCATCTGACAAGTGATGTT+TGG | + | chr1.2:25476209-25476228 | None:intergenic | 40.0% | |
| TGCCAGTCCATAGTATGTTA+TGG | + | chr1.2:25474008-25474027 | None:intergenic | 40.0% | |
| TTCATCAGAAGAAGCCAAGA+TGG | + | chr1.2:25473279-25473298 | None:intergenic | 40.0% | |
| TTTGGGAGAGCTTATGGAAA+TGG | - | chr1.2:25473897-25473916 | MS.gene053320:intron | 40.0% | |
| ! | AAGGCATCCAAAAGATGAAG+AGG | - | chr1.2:25471614-25471633 | MS.gene053320:intron | 40.0% |
| ! | ACATCTTCCTCTTCAGCTTT+TGG | + | chr1.2:25471864-25471883 | None:intergenic | 40.0% |
| ! | AGGTTTTTCCGTAACGTCTT+CGG | + | chr1.2:25472529-25472548 | None:intergenic | 40.0% |
| ! | CATCTGGCAAAGTATCTTTC+AGG | + | chr1.2:25474510-25474529 | None:intergenic | 40.0% |
| ! | CCTTCAACTGATTCAGCATA+TGG | + | chr1.2:25473663-25473682 | None:intergenic | 40.0% |
| ! | TCAGCATATGGAGACTTTTC+AGG | + | chr1.2:25473651-25473670 | None:intergenic | 40.0% |
| !! | GAAAGCTATAGGACTGGTTT+CGG | - | chr1.2:25473082-25473101 | MS.gene053320:CDS | 40.0% |
| !! | GAACCGGTTTTTCTTATTGC+AGG | - | chr1.2:25475330-25475349 | MS.gene053320:CDS | 40.0% |
| !! | GGAAATTCATTTGGTGGTGA+AGG | - | chr1.2:25473311-25473330 | MS.gene053320:intron | 40.0% |
| AATGCATCCAACAGCTGAAG+AGG | - | chr1.2:25471374-25471393 | MS.gene053320:CDS | 45.0% | |
| ACATCTTTGGCCTCATCTGT+TGG | + | chr1.2:25471483-25471502 | None:intergenic | 45.0% | |
| AGAAGCAGCTTCACTGATAG+TGG | - | chr1.2:25476070-25476089 | MS.gene053320:CDS | 45.0% | |
| AGAAGCTCCTGTTCTAGTCA+TGG | - | chr1.2:25476466-25476485 | MS.gene053320:intron | 45.0% | |
| AGACTGTTTGGGAGAGCTTA+TGG | - | chr1.2:25473891-25473910 | MS.gene053320:intron | 45.0% | |
| CCCTCTGATCATTCTCTTCA+AGG | - | chr1.2:25474472-25474491 | MS.gene053320:CDS | 45.0% | |
| CTTCAATCTCAACCTCCGAA+TGG | - | chr1.2:25476241-25476260 | MS.gene053320:CDS | 45.0% | |
| GAAGAAGATGCTCATGGAAG+TGG | - | chr1.2:25471333-25471352 | MS.gene053320:CDS | 45.0% | |
| GAGGAAGATGTTCAAGAGGA+AGG | - | chr1.2:25471633-25471652 | MS.gene053320:intron | 45.0% | |
| GATATGCCAAGAGGGTCTAA+TGG | - | chr1.2:25475177-25475196 | MS.gene053320:intron | 45.0% | |
| GATGATCATGAAAGAGCTGC+AGG | - | chr1.2:25473149-25473168 | MS.gene053320:intron | 45.0% | |
| GATGTTCAAGAGGAAGGTTC+AGG | - | chr1.2:25471639-25471658 | MS.gene053320:intron | 45.0% | |
| GCATCATGAGCATCTTCTTG+TGG | + | chr1.2:25472597-25472616 | None:intergenic | 45.0% | |
| GCCACAACCATGCTTAAATC+AGG | - | chr1.2:25475603-25475622 | MS.gene053320:CDS | 45.0% | |
| GCCTTGAAGAGAATGATCAG+AGG | + | chr1.2:25474476-25474495 | None:intergenic | 45.0% | |
| GGCTTCTGATCATGATCCAT+TGG | - | chr1.2:25472241-25472260 | MS.gene053320:CDS | 45.0% | |
| TGAGGAGAAAGCTATAGGAC+TGG | - | chr1.2:25473076-25473095 | MS.gene053320:CDS | 45.0% | |
| TGTGGCTCATGAAGTTGAAC+CGG | - | chr1.2:25475314-25475333 | MS.gene053320:CDS | 45.0% | |
| TTCTTCAACTGAAGGCAGTG+AGG | - | chr1.2:25473707-25473726 | MS.gene053320:intron | 45.0% | |
| ! | ATTTAGCTCGTTCTTGCTCC+CGG | + | chr1.2:25475759-25475778 | None:intergenic | 45.0% |
| ! | ATTTTACAACTGTCCCCGAG+GGG | - | chr1.2:25474854-25474873 | MS.gene053320:CDS | 45.0% |
| ! | CATTTTACAACTGTCCCCGA+GGG | - | chr1.2:25474853-25474872 | MS.gene053320:CDS | 45.0% |
| ! | TCATTTTACAACTGTCCCCG+AGG | - | chr1.2:25474852-25474871 | MS.gene053320:CDS | 45.0% |
| ! | TTGGGTAGAAATGAGGTGTC+CGG | + | chr1.2:25475802-25475821 | None:intergenic | 45.0% |
| !! | ACATCTTTGGCCTTATCCGT+TGG | + | chr1.2:25471759-25471778 | None:intergenic | 45.0% |
| !! | GCGATTTTCATTGGCTATCC+TGG | + | chr1.2:25474791-25474810 | None:intergenic | 45.0% |
| AGACTCCCTAACAGCTGGAA+TGG | - | chr1.2:25475905-25475924 | MS.gene053320:CDS | 50.0% | |
| ATCCTGGATCACCAAGAGAC+CGG | - | chr1.2:25475780-25475799 | MS.gene053320:CDS | 50.0% | |
| ATGGAGTTCAAATCCCCTCG+GGG | + | chr1.2:25474870-25474889 | None:intergenic | 50.0% | |
| ATGGCCAAGCTTGTCAACTG+TGG | + | chr1.2:25475664-25475683 | None:intergenic | 50.0% | |
| ATTCCAGCTGTTAGGGAGTC+TGG | + | chr1.2:25475906-25475925 | None:intergenic | 50.0% | |
| CAGTCTCCATTAGACCCTCT+TGG | + | chr1.2:25475186-25475205 | None:intergenic | 50.0% | |
| CGGAGGTTGAGATTGAAGCT+TGG | + | chr1.2:25476239-25476258 | None:intergenic | 50.0% | |
| CTCGTCTTGATTCCATTCGG+AGG | + | chr1.2:25476256-25476275 | None:intergenic | 50.0% | |
| GATGGAGTTCAAATCCCCTC+GGG | + | chr1.2:25474871-25474890 | None:intergenic | 50.0% | |
| GCAACATCCTCTTCAGCTGT+TGG | + | chr1.2:25471384-25471403 | None:intergenic | 50.0% | |
| GGAGTTTCGAGAGCAACAAC+GGG | + | chr1.2:25475882-25475901 | None:intergenic | 50.0% | |
| GGATGGAGTTCAAATCCCCT+CGG | + | chr1.2:25474872-25474891 | None:intergenic | 50.0% | |
| GGGAGTTTCGAGAGCAACAA+CGG | + | chr1.2:25475883-25475902 | None:intergenic | 50.0% | |
| GTCTGTGCCATGACTAGAAC+AGG | + | chr1.2:25476476-25476495 | None:intergenic | 50.0% | |
| TAAGGCTTTCAGAGGAGACG+TGG | - | chr1.2:25475827-25475846 | MS.gene053320:CDS | 50.0% | |
| TATGTGGGTGGCTGCTGTTA+GGG | - | chr1.2:25475720-25475739 | MS.gene053320:CDS | 50.0% | |
| TCTGCTCTACATTTCCCTCC+TGG | + | chr1.2:25475569-25475588 | None:intergenic | 50.0% | |
| TGTGCCACAGTTGACAAGCT+TGG | - | chr1.2:25475657-25475676 | MS.gene053320:CDS | 50.0% | |
| TTCCAGCTGTTAGGGAGTCT+GGG | + | chr1.2:25475905-25475924 | None:intergenic | 50.0% | |
| ! | AAATGAGGTGTCCGGTCTCT+TGG | + | chr1.2:25475794-25475813 | None:intergenic | 50.0% |
| ! | CAAGGTACTTAGGGCCTGTT+TGG | - | chr1.2:25474714-25474733 | MS.gene053320:CDS | 50.0% |
| ! | GGTTGTGGCCGTGAAACTTT+TGG | + | chr1.2:25475592-25475611 | None:intergenic | 50.0% |
| ACAGCAGCCACCCACATACA+AGG | + | chr1.2:25475718-25475737 | None:intergenic | 55.0% | |
| GTATGTGGGTGGCTGCTGTT+AGG | - | chr1.2:25475719-25475738 | MS.gene053320:CDS | 55.0% | |
| TCCAGCTGTTAGGGAGTCTG+GGG | + | chr1.2:25475904-25475923 | None:intergenic | 55.0% | |
| ! | GCTGCAGGGTTGAGTTCTGA+TGG | - | chr1.2:25473164-25473183 | MS.gene053320:intron | 55.0% |
| ! | TTAGGGAGTCAGAGGAGTGC+CGG | - | chr1.2:25475737-25475756 | MS.gene053320:CDS | 55.0% |
| CCAGCTGTTAGGGAGTCTGG+GGG | + | chr1.2:25475903-25475922 | None:intergenic | 60.0% | |
| CGTGGTGTCCGATCTCTCAG+TGG | - | chr1.2:25475845-25475864 | MS.gene053320:CDS | 60.0% | |
| GGCTGCTGTTAGGGAGTCAG+AGG | - | chr1.2:25475729-25475748 | MS.gene053320:CDS | 60.0% | |
| ! | GTCCGGTCTCTTGGTGATCC+AGG | + | chr1.2:25475785-25475804 | None:intergenic | 60.0% |
| !! | TAGGGAGTCAGAGGAGTGCC+GGG | - | chr1.2:25475738-25475757 | MS.gene053320:CDS | 60.0% |
| CCCCCAGACTCCCTAACAGC+TGG | - | chr1.2:25475900-25475919 | MS.gene053320:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 25470860 | 25476628 | 25470860 | ID=MS.gene053320 |
| chr1.2 | mRNA | 25470860 | 25476628 | 25470860 | ID=MS.gene053320.t1;Parent=MS.gene053320 |
| chr1.2 | exon | 25476586 | 25476628 | 25476586 | ID=MS.gene053320.t1.exon1;Parent=MS.gene053320.t1 |
| chr1.2 | CDS | 25476586 | 25476628 | 25476586 | ID=cds.MS.gene053320.t1;Parent=MS.gene053320.t1 |
| chr1.2 | exon | 25475198 | 25476475 | 25475198 | ID=MS.gene053320.t1.exon2;Parent=MS.gene053320.t1 |
| chr1.2 | CDS | 25475198 | 25476475 | 25475198 | ID=cds.MS.gene053320.t1;Parent=MS.gene053320.t1 |
| chr1.2 | exon | 25474156 | 25475070 | 25474156 | ID=MS.gene053320.t1.exon3;Parent=MS.gene053320.t1 |
| chr1.2 | CDS | 25474156 | 25475070 | 25474156 | ID=cds.MS.gene053320.t1;Parent=MS.gene053320.t1 |
| chr1.2 | exon | 25473720 | 25473866 | 25473720 | ID=MS.gene053320.t1.exon4;Parent=MS.gene053320.t1 |
| chr1.2 | CDS | 25473720 | 25473866 | 25473720 | ID=cds.MS.gene053320.t1;Parent=MS.gene053320.t1 |
| chr1.2 | exon | 25472771 | 25473120 | 25472771 | ID=MS.gene053320.t1.exon5;Parent=MS.gene053320.t1 |
| chr1.2 | CDS | 25472771 | 25473120 | 25472771 | ID=cds.MS.gene053320.t1;Parent=MS.gene053320.t1 |
| chr1.2 | exon | 25471864 | 25472434 | 25471864 | ID=MS.gene053320.t1.exon6;Parent=MS.gene053320.t1 |
| chr1.2 | CDS | 25471864 | 25472434 | 25471864 | ID=cds.MS.gene053320.t1;Parent=MS.gene053320.t1 |
| chr1.2 | exon | 25470860 | 25471464 | 25470860 | ID=MS.gene053320.t1.exon7;Parent=MS.gene053320.t1 |
| chr1.2 | CDS | 25470860 | 25471464 | 25470860 | ID=cds.MS.gene053320.t1;Parent=MS.gene053320.t1 |
| Gene Sequence |
| Protein sequence |
