Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053782.t1 | XP_003614714.1 | 96 | 252 | 10 | 0 | 1 | 252 | 1 | 252 | 8.10E-112 | 413.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053782.t1 | B6K8A0 | 35.9 | 170 | 108 | 1 | 77 | 246 | 115 | 283 | 1.1e-21 | 105.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053782.t1 | G7JXB6 | 96.0 | 252 | 10 | 0 | 1 | 252 | 1 | 252 | 5.8e-112 | 413.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene64804 | MS.gene053782 | PPI |
| MS.gene67483 | MS.gene053782 | PPI |
| MS.gene59503 | MS.gene053782 | PPI |
| MS.gene035486 | MS.gene053782 | PPI |
| MS.gene040757 | MS.gene053782 | PPI |
| MS.gene93333 | MS.gene053782 | PPI |
| MS.gene073734 | MS.gene053782 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053782.t1 | MTR_5g058150 | 96.825 | 252 | 8 | 0 | 1 | 252 | 1 | 252 | 1.33e-180 | 496 |
| MS.gene053782.t1 | MTR_6g075250 | 74.502 | 251 | 61 | 3 | 1 | 250 | 1 | 249 | 4.31e-121 | 345 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053782.t1 | AT1G12650 | 58.706 | 201 | 80 | 2 | 52 | 249 | 48 | 248 | 1.04e-70 | 217 |
| MS.gene053782.t1 | AT1G12650 | 58.706 | 201 | 80 | 2 | 52 | 249 | 48 | 248 | 1.04e-70 | 217 |
| MS.gene053782.t1 | AT1G12650 | 58.706 | 201 | 80 | 2 | 52 | 249 | 48 | 248 | 1.04e-70 | 217 |
| MS.gene053782.t1 | AT1G12650 | 58.706 | 201 | 80 | 2 | 52 | 249 | 48 | 248 | 1.04e-70 | 217 |
Find 41 sgRNAs with CRISPR-Local
Find 369 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTACATTTCTTGAGATAAA+AGG | 0.164847 | 5.1:-45252526 | None:intergenic |
| GAATATTGAGACACAGATTT+TGG | 0.225799 | 5.1:+45252455 | MS.gene053782:CDS |
| ACAATTAATCTGACCTTCTT+AGG | 0.235824 | 5.1:-45250019 | None:intergenic |
| CAGAAGATAAGAAGTTAAAA+AGG | 0.271638 | 5.1:+45249006 | MS.gene053782:CDS |
| TGGGTTTCATCGGTTGAATT+TGG | 0.277771 | 5.1:-45248736 | None:intergenic |
| TGGCATAACAGGCTCTTAAA+AGG | 0.329338 | 5.1:+45252253 | MS.gene053782:intron |
| GGGTTTCATCGGTTGAATTT+GGG | 0.335327 | 5.1:-45248735 | None:intergenic |
| TTTCAACAAGCCTTTGCTTC+CGG | 0.346969 | 5.1:-45253970 | None:intergenic |
| TACGATATGGCATGAATCTA+TGG | 0.372533 | 5.1:-45254174 | None:intergenic |
| AGAGAGAGAAGCAGCAAAGC+AGG | 0.383818 | 5.1:+45252494 | MS.gene053782:CDS |
| TTTAACTTCTTATCTTCTGC+AGG | 0.387171 | 5.1:-45249002 | None:intergenic |
| TCTATTTCATTTCTACGCTC+TGG | 0.399432 | 5.1:-45252297 | None:intergenic |
| CCACGATTTGAGTCTCTTTG+CGG | 0.402540 | 5.1:+45250479 | MS.gene053782:CDS |
| CTCTTCGTAGTGGGTTTCAT+CGG | 0.434142 | 5.1:-45248746 | None:intergenic |
| TTCTTGCTACTAGCTTCCAT+TGG | 0.435250 | 5.1:-45249962 | None:intergenic |
| TTACATTTCTTGAGATAAAA+GGG | 0.436036 | 5.1:-45252525 | None:intergenic |
| TGCAGAAAGCTCGATCGAAT+GGG | 0.447640 | 5.1:+45248958 | MS.gene053782:CDS |
| TTCATGCCATATCGTAGATC+TGG | 0.465483 | 5.1:+45254181 | MS.gene053782:CDS |
| ACATCTCTAAAAGCAGGAAC+TGG | 0.493887 | 5.1:-45249986 | None:intergenic |
| GCGGTACATTTGACAATGAT+CGG | 0.498086 | 5.1:+45250498 | MS.gene053782:CDS |
| AAGCCTTTGCTTCCGGATCT+CGG | 0.499116 | 5.1:-45253963 | None:intergenic |
| AGTTTCATTCTCTTCGTAGT+GGG | 0.502268 | 5.1:-45248755 | None:intergenic |
| TGATCTTCCTGCTGAAAGAC+AGG | 0.502469 | 5.1:+45252152 | MS.gene053782:CDS |
| TCTGGTGAAAACGTGGAGTA+AGG | 0.502921 | 5.1:+45254199 | MS.gene053782:CDS |
| TTGCAGAAAGCTCGATCGAA+TGG | 0.509933 | 5.1:+45248957 | MS.gene053782:CDS |
| CAGCCGAGATCCGGAAGCAA+AGG | 0.510746 | 5.1:+45253960 | MS.gene053782:intron |
| GCTAGCTGATGTAACATTCG+AGG | 0.511133 | 5.1:+45248932 | MS.gene053782:CDS |
| CAGTTTCATTCTCTTCGTAG+TGG | 0.524074 | 5.1:-45248756 | None:intergenic |
| GAGAGAGAAGCAGCAAAGCA+GGG | 0.548569 | 5.1:+45252495 | MS.gene053782:CDS |
| TGAATGACATCTCTAAAAGC+AGG | 0.560062 | 5.1:-45249992 | None:intergenic |
| CTACCTACCTGTCTTTCAGC+AGG | 0.562589 | 5.1:-45252159 | None:intergenic |
| TGTCATTCAAGCTCCTAAGA+AGG | 0.563312 | 5.1:+45250006 | MS.gene053782:CDS |
| AAATAGAAGAGCGCATAGCA+TGG | 0.572976 | 5.1:+45252313 | MS.gene053782:CDS |
| GAGGAAGAGAAATGCTGCAA+AGG | 0.582512 | 5.1:+45254150 | MS.gene053782:CDS |
| AATAGAAGAGCGCATAGCAT+GGG | 0.609808 | 5.1:+45252314 | MS.gene053782:CDS |
| TCGTAGATCTGGTGAAAACG+TGG | 0.638393 | 5.1:+45254192 | MS.gene053782:CDS |
| CCGCAAAGAGACTCAAATCG+TGG | 0.650639 | 5.1:-45250479 | None:intergenic |
| GCAGAAAGCTCGATCGAATG+GGG | 0.651683 | 5.1:+45248959 | MS.gene053782:CDS |
| GCTTACATCTTCTGACGAGG+AGG | 0.674116 | 5.1:-45248797 | None:intergenic |
| GTTGCTTACATCTTCTGACG+AGG | 0.675748 | 5.1:-45248800 | None:intergenic |
| GTTCTCAAAATGAACAAACA+CGG | 0.695471 | 5.1:+45248703 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTATTCAATTAAAAGAA+TGG | + | chr5.1:45253735-45253754 | MS.gene053782:intron | 10.0% |
| !! | ATAGTAAATAGATAAAATTA+AGG | - | chr5.1:45254089-45254108 | None:intergenic | 10.0% |
| !! | CAAATAATTATATATTACTA+AGG | - | chr5.1:45249875-45249894 | None:intergenic | 10.0% |
| !! | TAGTAAATAGATAAAATTAA+GGG | - | chr5.1:45254088-45254107 | None:intergenic | 10.0% |
| !!! | ATTTTAATTTTGATTATTGT+AGG | + | chr5.1:45248884-45248903 | MS.gene053782:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr5.1:45251523-45251542 | MS.gene053782:intron | 100.0% |
| !! | ATAAAATAAAATTCCAACTA+TGG | + | chr5.1:45253911-45253930 | MS.gene053782:intron | 15.0% |
| !! | ATACTAAATTATTATAACCT+AGG | - | chr5.1:45248850-45248869 | None:intergenic | 15.0% |
| !! | AAAAAATCATTATCCATAGT+TGG | - | chr5.1:45253927-45253946 | None:intergenic | 20.0% |
| !! | AAATTAACACAACAAGAAAA+AGG | - | chr5.1:45250556-45250575 | None:intergenic | 20.0% |
| !! | AATCATATATTGAGAAAAAG+AGG | + | chr5.1:45254131-45254150 | MS.gene053782:CDS | 20.0% |
| !! | ACTAATAAAAATTACACCTT+TGG | - | chr5.1:45252376-45252395 | None:intergenic | 20.0% |
| !! | AGAAGATAAGAAGTTAAAAA+GGG | + | chr5.1:45249007-45249026 | MS.gene053782:CDS | 20.0% |
| !! | AGATTGTAATTCTAACATAT+CGG | - | chr5.1:45252597-45252616 | None:intergenic | 20.0% |
| !! | ATTTGCCATACAAAAAAAAT+AGG | + | chr5.1:45251905-45251924 | MS.gene053782:intron | 20.0% |
| !! | CTAATAATAATACATGTACT+TGG | + | chr5.1:45252088-45252107 | MS.gene053782:intron | 20.0% |
| !! | TAAAAATAAGTCAATCCAAA+CGG | - | chr5.1:45249331-45249350 | None:intergenic | 20.0% |
| !! | TACAAAAAAAATAGGTTCAT+TGG | + | chr5.1:45251913-45251932 | MS.gene053782:intron | 20.0% |
| !! | TCATTGAACTTATGAAATTA+GGG | + | chr5.1:45249218-45249237 | MS.gene053782:intron | 20.0% |
| !! | TGAAAAATTTAATCATCTCA+AGG | + | chr5.1:45253988-45254007 | MS.gene053782:CDS | 20.0% |
| !! | TTACATTTCTTGAGATAAAA+GGG | - | chr5.1:45252528-45252547 | None:intergenic | 20.0% |
| !!! | AAAAGATGTACAAGTTTTAA+GGG | + | chr5.1:45250333-45250352 | MS.gene053782:intron | 20.0% |
| !!! | ACTAATTTTACATATGATAG+CGG | - | chr5.1:45250301-45250320 | None:intergenic | 20.0% |
| !!! | ATGAACCTATTTTTTTTGTA+TGG | - | chr5.1:45251913-45251932 | None:intergenic | 20.0% |
| !!! | CAATTTCTGTTTTATATATC+TGG | + | chr5.1:45250403-45250422 | MS.gene053782:intron | 20.0% |
| !!! | CTATGGATAATGATTTTTTT+TGG | + | chr5.1:45253928-45253947 | MS.gene053782:intron | 20.0% |
| !!! | TAAAAGATGTACAAGTTTTA+AGG | + | chr5.1:45250332-45250351 | MS.gene053782:intron | 20.0% |
| !!! | TACTTTTCGTTTTTAAATTG+TGG | + | chr5.1:45253216-45253235 | MS.gene053782:intron | 20.0% |
| !!! | TATACTTTTCTAGATTGTAA+TGG | + | chr5.1:45251957-45251976 | MS.gene053782:intron | 20.0% |
| !!! | TATTGAATGTCTCATATTTT+AGG | - | chr5.1:45252683-45252702 | None:intergenic | 20.0% |
| !!! | TGTTGTTTTATCATTTTGTA+AGG | - | chr5.1:45250871-45250890 | None:intergenic | 20.0% |
| !!! | TTAATTTTGATTATTGTAGG+AGG | + | chr5.1:45248887-45248906 | MS.gene053782:intron | 20.0% |
| !!! | TTGACTTATTTTTAAGCTTA+TGG | + | chr5.1:45249337-45249356 | MS.gene053782:intron | 20.0% |
| !!! | TTTATAATTTTTTCCGTCAT+TGG | + | chr5.1:45250894-45250913 | MS.gene053782:intron | 20.0% |
| ! | AAAAAAACTACACAAGCTAA+TGG | - | chr5.1:45250151-45250170 | None:intergenic | 25.0% |
| ! | AAAATTAAGCCAATCAAAAG+AGG | + | chr5.1:45249511-45249530 | MS.gene053782:intron | 25.0% |
| ! | AAACCTAAAAATGAGCTTAA+GGG | + | chr5.1:45253576-45253595 | MS.gene053782:intron | 25.0% |
| ! | AAAGAATAGTACATTGAGTT+GGG | - | chr5.1:45250949-45250968 | None:intergenic | 25.0% |
| ! | AAATACAGCAAAAATCAACA+TGG | - | chr5.1:45250649-45250668 | None:intergenic | 25.0% |
| ! | AACTTATGAAAACAGCTTAT+GGG | + | chr5.1:45249304-45249323 | MS.gene053782:intron | 25.0% |
| ! | AATATGAGACATTCAATATG+CGG | + | chr5.1:45252685-45252704 | MS.gene053782:intron | 25.0% |
| ! | AATTCATCAAATGTTAACCT+AGG | + | chr5.1:45248830-45248849 | MS.gene053782:intron | 25.0% |
| ! | ACAGTATTTCTTAAATACAG+TGG | - | chr5.1:45251050-45251069 | None:intergenic | 25.0% |
| ! | AGAAAAAGAATAACCAATGA+CGG | - | chr5.1:45250910-45250929 | None:intergenic | 25.0% |
| ! | AGATAGTTCCATATAATTCT+TGG | + | chr5.1:45251334-45251353 | MS.gene053782:intron | 25.0% |
| ! | ATAAAAATTACACCTTTGGA+CGG | - | chr5.1:45252372-45252391 | None:intergenic | 25.0% |
| ! | ATAGTTACCTCTTAATGAAT+AGG | + | chr5.1:45253031-45253050 | MS.gene053782:intron | 25.0% |
| ! | ATTTCTTAAATACAGTGGAT+TGG | - | chr5.1:45251045-45251064 | None:intergenic | 25.0% |
| ! | CAGAAGATAAGAAGTTAAAA+AGG | + | chr5.1:45249006-45249025 | MS.gene053782:CDS | 25.0% |
| ! | CTCATTGAACTTATGAAATT+AGG | + | chr5.1:45249217-45249236 | MS.gene053782:intron | 25.0% |
| ! | CTGAAATTCTTTCTTACTAT+GGG | + | chr5.1:45250808-45250827 | MS.gene053782:intron | 25.0% |
| ! | CTTACATTTCTTGAGATAAA+AGG | - | chr5.1:45252529-45252548 | None:intergenic | 25.0% |
| ! | GTAAGGATTAATTTCAATCT+TGG | - | chr5.1:45250854-45250873 | None:intergenic | 25.0% |
| ! | GTATTATTATTAGTGCTACA+CGG | - | chr5.1:45252081-45252100 | None:intergenic | 25.0% |
| ! | TAAACCTAAAAATGAGCTTA+AGG | + | chr5.1:45253575-45253594 | MS.gene053782:intron | 25.0% |
| ! | TAAAGAATAGTACATTGAGT+TGG | - | chr5.1:45250950-45250969 | None:intergenic | 25.0% |
| ! | TAATTTCAATCTTGGACTAT+GGG | - | chr5.1:45250846-45250865 | None:intergenic | 25.0% |
| ! | TACAACCTGAAAAATAATGA+AGG | - | chr5.1:45250453-45250472 | None:intergenic | 25.0% |
| ! | TCTCATTCACATGTTTATAT+GGG | + | chr5.1:45253793-45253812 | MS.gene053782:intron | 25.0% |
| ! | TGAAATTCTTTCTTACTATG+GGG | + | chr5.1:45250809-45250828 | MS.gene053782:intron | 25.0% |
| ! | TGTAGAAACCAAGAATTATA+TGG | - | chr5.1:45251345-45251364 | None:intergenic | 25.0% |
| ! | TTAATTTCAATCTTGGACTA+TGG | - | chr5.1:45250847-45250866 | None:intergenic | 25.0% |
| ! | TTATATGGGGAAATAGTTAT+CGG | + | chr5.1:45253807-45253826 | MS.gene053782:intron | 25.0% |
| !! | AAGTTTAAGCATTTTCTTAC+CGG | + | chr5.1:45250616-45250635 | MS.gene053782:intron | 25.0% |
| !! | ATGATTTCCCAATTTTTACT+AGG | + | chr5.1:45249939-45249958 | MS.gene053782:intron | 25.0% |
| !! | ATTTACTATTTTCAGTCATC+TGG | + | chr5.1:45254100-45254119 | MS.gene053782:intron | 25.0% |
| !! | TCATATGTTTTCAGATTGTT+TGG | - | chr5.1:45249761-45249780 | None:intergenic | 25.0% |
| !! | TCTGAAATTCTTTCTTACTA+TGG | + | chr5.1:45250807-45250826 | MS.gene053782:intron | 25.0% |
| !! | TTATGAAATTAGGGTTTGTT+TGG | + | chr5.1:45249227-45249246 | MS.gene053782:intron | 25.0% |
| !! | TTTGTGTTCTTTTTCTACAT+TGG | + | chr5.1:45253423-45253442 | MS.gene053782:intron | 25.0% |
| !!! | AAAAGAATGGACTATATTGT+TGG | + | chr5.1:45253748-45253767 | MS.gene053782:intron | 25.0% |
| !!! | ATTAGCTTGTGTAGTTTTTT+TGG | + | chr5.1:45250150-45250169 | MS.gene053782:intron | 25.0% |
| !!! | ATTGGCTTAATTTTAGCATA+TGG | - | chr5.1:45249505-45249524 | None:intergenic | 25.0% |
| !!! | CAACTGTTTTTAACTTAATC+TGG | + | chr5.1:45252027-45252046 | MS.gene053782:intron | 25.0% |
| !!! | TCATTTTTAGGTTTATTCCT+AGG | - | chr5.1:45253570-45253589 | None:intergenic | 25.0% |
| !!! | TTAGCTTGTGTAGTTTTTTT+GGG | + | chr5.1:45250151-45250170 | MS.gene053782:intron | 25.0% |
| !!! | TTTTAACTTTAACTAAGAGC+CGG | + | chr5.1:45250709-45250728 | MS.gene053782:intron | 25.0% |
| AACTGTACAAGATACATCAA+AGG | - | chr5.1:45251818-45251837 | None:intergenic | 30.0% | |
| AAGCTGTTAGATAATACTGA+AGG | + | chr5.1:45250981-45251000 | MS.gene053782:intron | 30.0% | |
| AATAAGCTGTTTATCCAAAC+AGG | - | chr5.1:45249071-45249090 | None:intergenic | 30.0% | |
| ACAATTAATCTGACCTTCTT+AGG | - | chr5.1:45250022-45250041 | None:intergenic | 30.0% | |
| AGTTAGTAACAATGCTCAAA+AGG | - | chr5.1:45253469-45253488 | None:intergenic | 30.0% | |
| ATAAGCTGTTTATCCAAACA+GGG | - | chr5.1:45249764-45249745 | None:intergenic | 30.0% | |
| ATACAATGCGGATAAAATGA+AGG | - | chr5.1:45254043-45254062 | None:intergenic | 30.0% | |
| ATACAGTTCTGTGAATATGA+AGG | + | chr5.1:45253834-45253853 | MS.gene053782:intron | 30.0% | |
| ATATCGGAAGTGATAGAAAA+GGG | - | chr5.1:45252581-45252600 | None:intergenic | 30.0% | |
| ATCAAATGATACAATAGCCA+AGG | - | chr5.1:45251184-45251203 | None:intergenic | 30.0% | |
| ATTTCTTTATTGTGCGAGAA+TGG | - | chr5.1:45253404-45253423 | None:intergenic | 30.0% | |
| CATTAAGAGGTAACTATAGA+AGG | - | chr5.1:45253028-45253047 | None:intergenic | 30.0% | |
| CATTGTTACTAACTGTCTAA+GGG | + | chr5.1:45253475-45253494 | MS.gene053782:intron | 30.0% | |
| CTCATTCACATGTTTATATG+GGG | + | chr5.1:45253794-45253813 | MS.gene053782:intron | 30.0% | |
| CTCTCATTCACATGTTTATA+TGG | + | chr5.1:45253792-45253811 | MS.gene053782:intron | 30.0% | |
| CTGTGAATATGAAGGTTAAA+TGG | + | chr5.1:45253842-45253861 | MS.gene053782:intron | 30.0% | |
| CTTGTAGGTTTAATTCAGTT+GGG | + | chr5.1:45253091-45253110 | MS.gene053782:intron | 30.0% | |
| GAACTTATGAAAACAGCTTA+TGG | + | chr5.1:45249303-45249322 | MS.gene053782:intron | 30.0% | |
| GGGAGATAAAATTATGTTGA+AGG | - | chr5.1:45252561-45252580 | None:intergenic | 30.0% | |
| TAAAAAGGGCTAATAAGAAC+AGG | + | chr5.1:45249021-45249040 | MS.gene053782:CDS | 30.0% | |
| TAAAAATTACACCTTTGGAC+GGG | - | chr5.1:45252371-45252390 | None:intergenic | 30.0% | |
| TAATTATTTGAATGACAGCG+TGG | + | chr5.1:45249885-45249904 | MS.gene053782:intron | 30.0% | |
| TACAATGCGGATAAAATGAA+GGG | - | chr5.1:45254042-45254061 | None:intergenic | 30.0% | |
| TATATGGGGAAATAGTTATC+GGG | + | chr5.1:45253808-45253827 | MS.gene053782:intron | 30.0% | |
| TCGTTTATGTGGATATCATT+TGG | + | chr5.1:45251373-45251392 | MS.gene053782:intron | 30.0% | |
| TCTCCTTTGATTACTCTTAA+GGG | + | chr5.1:45253149-45253168 | MS.gene053782:intron | 30.0% | |
| TTACCTCTTAATGAATAGGA+GGG | + | chr5.1:45253035-45253054 | MS.gene053782:intron | 30.0% | |
| TTATGTGGATATCATTTGGT+TGG | + | chr5.1:45251377-45251396 | MS.gene053782:intron | 30.0% | |
| TTCTCCTTTGATTACTCTTA+AGG | + | chr5.1:45253148-45253167 | MS.gene053782:intron | 30.0% | |
| TTTCCCTGTTAAACAAATTG+CGG | + | chr5.1:45250191-45250210 | MS.gene053782:intron | 30.0% | |
| TTTCTTTATTGTGCGAGAAT+GGG | - | chr5.1:45253403-45253422 | None:intergenic | 30.0% | |
| TTTGCACACACAAGAATAAA+AGG | - | chr5.1:45249915-45249934 | None:intergenic | 30.0% | |
| ! | GAATATTGAGACACAGATTT+TGG | + | chr5.1:45252455-45252474 | MS.gene053782:CDS | 30.0% |
| ! | TTTAACTTCTTATCTTCTGC+AGG | - | chr5.1:45249005-45249024 | None:intergenic | 30.0% |
| !! | AAATCAACATGGTTTTACAC+CGG | - | chr5.1:45250638-45250657 | None:intergenic | 30.0% |
| !! | ACGCTTTTGAAAACTTTCAT+AGG | - | chr5.1:45249538-45249557 | None:intergenic | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | + | chr5.1:45249278-45249297 | MS.gene053782:intron | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | - | chr5.1:45249297-45249278 | None:intergenic | 30.0% |
| !! | ATTGGCGTTTTAGTAGATTT+TGG | + | chr5.1:45251931-45251950 | MS.gene053782:intron | 30.0% |
| !! | CGCTTTTGAAAACTTTCATA+GGG | - | chr5.1:45249537-45249556 | None:intergenic | 30.0% |
| !! | CTTGTTGGTTTAATTCAGTT+GGG | + | chr5.1:45252955-45252974 | MS.gene053782:intron | 30.0% |
| !! | TAAGTTTTGTGAGACTGTTT+GGG | + | chr5.1:45249279-45249298 | MS.gene053782:intron | 30.0% |
| !! | TAAGTTTTGTGAGACTGTTT+GGG | - | chr5.1:45249298-45249279 | None:intergenic | 30.0% |
| !! | TAGAATTTTAGCGCTATTAG+TGG | - | chr5.1:45253660-45253679 | None:intergenic | 30.0% |
| !! | TTGTTAGTTTGTTACTTGTC+TGG | + | chr5.1:45250038-45250057 | MS.gene053782:intron | 30.0% |
| !!! | TAGCTTGTGTAGTTTTTTTG+GGG | + | chr5.1:45250152-45250171 | MS.gene053782:intron | 30.0% |
| !!! | TCTGTTTTTCTGGCTTTTTT+TGG | + | chr5.1:45251674-45251693 | MS.gene053782:intron | 30.0% |
| AAAAATTACACCTTTGGACG+GGG | - | chr5.1:45252370-45252389 | None:intergenic | 35.0% | |
| AAACACACACCAACAACTAA+AGG | - | chr5.1:45251715-45251734 | None:intergenic | 35.0% | |
| AAGCTCTATTGCTATAGCAA+AGG | - | chr5.1:45249644-45249663 | None:intergenic | 35.0% | |
| ACAATGCGGATAAAATGAAG+GGG | - | chr5.1:45254041-45254060 | None:intergenic | 35.0% | |
| ACACCCTTAAGAGTAATCAA+AGG | - | chr5.1:45253155-45253174 | None:intergenic | 35.0% | |
| ACTTGATGCATTAGACATGA+AGG | + | chr5.1:45252905-45252924 | MS.gene053782:intron | 35.0% | |
| AGACTGTTTGGGAAAAACAA+TGG | - | chr5.1:45249794-45249813 | None:intergenic | 35.0% | |
| AGAGTAATCAAAGGAGAAAC+TGG | - | chr5.1:45253146-45253165 | None:intergenic | 35.0% | |
| AGTAGGGACAGAAAATCTAA+GGG | - | chr5.1:45253379-45253398 | None:intergenic | 35.0% | |
| AGTTTCATTCTCTTCGTAGT+GGG | - | chr5.1:45248758-45248777 | None:intergenic | 35.0% | |
| AGTTTCTTAAGTGACCTTGT+AGG | + | chr5.1:45253076-45253095 | MS.gene053782:intron | 35.0% | |
| ATGATACAATAGCCAAGGAA+AGG | - | chr5.1:45251179-45251198 | None:intergenic | 35.0% | |
| CAGTACGACATAATACAATG+CGG | - | chr5.1:45254055-45254074 | None:intergenic | 35.0% | |
| CATATCGGAAGTGATAGAAA+AGG | - | chr5.1:45252582-45252601 | None:intergenic | 35.0% | |
| CATGCATATTACTTAGTCAG+CGG | + | chr5.1:45251280-45251299 | MS.gene053782:intron | 35.0% | |
| CCAACTGAATTAAACCAACA+AGG | - | chr5.1:45252957-45252976 | None:intergenic | 35.0% | |
| CCAACTGAATTAAACCTACA+AGG | - | chr5.1:45253093-45253112 | None:intergenic | 35.0% | |
| CCTTGTAGGTTTAATTCAGT+TGG | + | chr5.1:45253090-45253109 | MS.gene053782:intron | 35.0% | |
| GAAAGACAATCAAAATCAGC+AGG | - | chr5.1:45251130-45251149 | None:intergenic | 35.0% | |
| GCATTAGATATCCTCTGTTT+GGG | + | chr5.1:45251302-45251321 | MS.gene053782:intron | 35.0% | |
| GCATTGTTACTAACTGTCTA+AGG | + | chr5.1:45253474-45253493 | MS.gene053782:intron | 35.0% | |
| GTTACCTCTTAATGAATAGG+AGG | + | chr5.1:45253034-45253053 | MS.gene053782:intron | 35.0% | |
| TAATGTGTTAGACTATTGCC+AGG | - | chr5.1:45253523-45253542 | None:intergenic | 35.0% | |
| TACGATATGGCATGAATCTA+TGG | - | chr5.1:45254177-45254196 | None:intergenic | 35.0% | |
| TAGGTTTATTCCTAGGAGTA+TGG | - | chr5.1:45253563-45253582 | None:intergenic | 35.0% | |
| TCATATGTAGTTAAGACTCC+AGG | + | chr5.1:45250274-45250293 | MS.gene053782:intron | 35.0% | |
| TCTATTTCATTTCTACGCTC+TGG | - | chr5.1:45252300-45252319 | None:intergenic | 35.0% | |
| TGATATCCACATAAACGACA+TGG | - | chr5.1:45251371-45251390 | None:intergenic | 35.0% | |
| TTAGTTGTTGGTGTGTGTTT+CGG | + | chr5.1:45251715-45251734 | MS.gene053782:intron | 35.0% | |
| TTATGACTTTCCTCTCATGA+CGG | + | chr5.1:45252223-45252242 | MS.gene053782:intron | 35.0% | |
| TTCCCTGTTAAACAAATTGC+GGG | + | chr5.1:45250192-45250211 | MS.gene053782:intron | 35.0% | |
| TTCTTGCACTTATCATGAGT+GGG | + | chr5.1:45251459-45251478 | MS.gene053782:intron | 35.0% | |
| TTCTTTATTGTGCGAGAATG+GGG | - | chr5.1:45253402-45253421 | None:intergenic | 35.0% | |
| TTTATGTGAGCGTCTTATGA+CGG | + | chr5.1:45251790-45251809 | MS.gene053782:intron | 35.0% | |
| TTTGTAACTTATGCCCTGTT+TGG | + | chr5.1:45249054-45249073 | MS.gene053782:intron | 35.0% | |
| ! | AGAAAATCTAAGGGTGTGTT+TGG | - | chr5.1:45253370-45253389 | None:intergenic | 35.0% |
| ! | AGGTTTATTCCTAGGAGTAT+GGG | - | chr5.1:45253562-45253581 | None:intergenic | 35.0% |
| ! | ATCCCGCAATTTGTTTAACA+GGG | - | chr5.1:45250197-45250216 | None:intergenic | 35.0% |
| ! | ATTACTCTTAAGGGTGTGTT+TGG | + | chr5.1:45253158-45253177 | MS.gene053782:intron | 35.0% |
| ! | CCATTGGCCTAGTAAAAATT+GGG | - | chr5.1:45249949-45249968 | None:intergenic | 35.0% |
| ! | TAGCACATTGGTGATATTAG+TGG | + | chr5.1:45252789-45252808 | MS.gene053782:intron | 35.0% |
| ! | TCACGTTTACATGTCTTTTC+AGG | + | chr5.1:45252404-45252423 | MS.gene053782:intron | 35.0% |
| ! | TCCATTGGCCTAGTAAAAAT+TGG | - | chr5.1:45249950-45249969 | None:intergenic | 35.0% |
| ! | TGAATGACATCTCTAAAAGC+AGG | - | chr5.1:45249995-45250014 | None:intergenic | 35.0% |
| ! | TTCTTTTCGCCTTTAGTTGT+TGG | + | chr5.1:45251703-45251722 | MS.gene053782:intron | 35.0% |
| ! | TTCTTTTGTCTCTCCTTTTC+TGG | + | chr5.1:45251618-45251637 | MS.gene053782:intron | 35.0% |
| ! | TTTTCACCAGATCTACGATA+TGG | - | chr5.1:45254190-45254209 | None:intergenic | 35.0% |
| !! | CCTTGTTGGTTTAATTCAGT+TGG | + | chr5.1:45252954-45252973 | MS.gene053782:intron | 35.0% |
| !! | GCATGCCTTCATTATTTTTC+AGG | + | chr5.1:45250445-45250464 | MS.gene053782:intron | 35.0% |
| AAACAACACGAGATATCAGC+AGG | - | chr5.1:45250081-45250100 | None:intergenic | 40.0% | |
| AACAACACGAGATATCAGCA+GGG | - | chr5.1:45250080-45250099 | None:intergenic | 40.0% | |
| ACACCCTCCTATTCATTAAG+AGG | - | chr5.1:45253041-45253060 | None:intergenic | 40.0% | |
| AGAGACAAAAGAACAACCAG+GGG | - | chr5.1:45251611-45251630 | None:intergenic | 40.0% | |
| ATACATGTACTTGGACTTGC+AGG | + | chr5.1:45252097-45252116 | MS.gene053782:intron | 40.0% | |
| CAATGCGGATAAAATGAAGG+GGG | - | chr5.1:45254040-45254059 | None:intergenic | 40.0% | |
| CAGTTTCATTCTCTTCGTAG+TGG | - | chr5.1:45248759-45248778 | None:intergenic | 40.0% | |
| CCTAAAAATGAGCTTAAGGG+TGG | + | chr5.1:45253579-45253598 | MS.gene053782:intron | 40.0% | |
| GAAGAATGTGTCGAAGTTGT+GGG | + | chr5.1:45250761-45250780 | MS.gene053782:intron | 40.0% | |
| GAGAGACAAAAGAACAACCA+GGG | - | chr5.1:45251612-45251631 | None:intergenic | 40.0% | |
| GAGTAGGGACAGAAAATCTA+AGG | - | chr5.1:45253380-45253399 | None:intergenic | 40.0% | |
| GATAAGTGCAAGAACTAGCA+GGG | - | chr5.1:45251453-45251472 | None:intergenic | 40.0% | |
| GCGGTACATTTGACAATGAT+CGG | + | chr5.1:45250498-45250517 | MS.gene053782:CDS | 40.0% | |
| GGCATTAGATATCCTCTGTT+TGG | + | chr5.1:45251301-45251320 | MS.gene053782:intron | 40.0% | |
| GTTCTTGCACTTATCATGAG+TGG | + | chr5.1:45251458-45251477 | MS.gene053782:intron | 40.0% | |
| TATTGCCAGGTTTCACTGTA+GGG | - | chr5.1:45253510-45253529 | None:intergenic | 40.0% | |
| TGAAAGAACGTCACTTAGCT+AGG | - | chr5.1:45250686-45250705 | None:intergenic | 40.0% | |
| TGATAAGTGCAAGAACTAGC+AGG | - | chr5.1:45251454-45251473 | None:intergenic | 40.0% | |
| TGGCATAACAGGCTCTTAAA+AGG | + | chr5.1:45252253-45252272 | MS.gene053782:intron | 40.0% | |
| TGTCATTCAAGCTCCTAAGA+AGG | + | chr5.1:45250006-45250025 | MS.gene053782:CDS | 40.0% | |
| TGTCCTCAAGAAGTCAACAT+AGG | + | chr5.1:45250739-45250758 | MS.gene053782:intron | 40.0% | |
| TGTGTTTGGATTGAGGGTTT+AGG | - | chr5.1:45253356-45253375 | None:intergenic | 40.0% | |
| TTCATGCCATATCGTAGATC+TGG | + | chr5.1:45254181-45254200 | MS.gene053782:CDS | 40.0% | |
| TTCTTGAGGACAGTGATAAC+CGG | - | chr5.1:45250731-45250750 | None:intergenic | 40.0% | |
| TTTCAACAAGCCTTTGCTTC+CGG | - | chr5.1:45253973-45253992 | None:intergenic | 40.0% | |
| TTTGGATTGAGGGTTTAGGA+GGG | - | chr5.1:45253352-45253371 | None:intergenic | 40.0% | |
| ! | AAATAGAAGAGCGCATAGCA+TGG | + | chr5.1:45252313-45252332 | MS.gene053782:CDS | 40.0% |
| ! | AATAGAAGAGCGCATAGCAT+GGG | + | chr5.1:45252314-45252333 | MS.gene053782:CDS | 40.0% |
| ! | ACAATGCCATGTCGTTTATG+TGG | + | chr5.1:45251362-45251381 | MS.gene053782:intron | 40.0% |
| ! | ACATCTCTAAAAGCAGGAAC+TGG | - | chr5.1:45249989-45250008 | None:intergenic | 40.0% |
| ! | ATGAATAGGAGGGTGTGTAT+CGG | + | chr5.1:45253045-45253064 | MS.gene053782:intron | 40.0% |
| ! | CCCAATTTTTACTAGGCCAA+TGG | + | chr5.1:45249946-45249965 | MS.gene053782:intron | 40.0% |
| ! | GATCCCGCAATTTGTTTAAC+AGG | - | chr5.1:45250198-45250217 | None:intergenic | 40.0% |
| ! | GGGTTTCATCGGTTGAATTT+GGG | - | chr5.1:45248738-45248757 | None:intergenic | 40.0% |
| ! | TAAGGGTGTGTTTGGATTGA+GGG | - | chr5.1:45253362-45253381 | None:intergenic | 40.0% |
| ! | TAGGAGTATGAAGACCTTGT+TGG | + | chr5.1:45252940-45252959 | MS.gene053782:intron | 40.0% |
| ! | TGGGTTTCATCGGTTGAATT+TGG | - | chr5.1:45248739-45248758 | None:intergenic | 40.0% |
| ! | TTCATAGGGCCTCTTTTGAT+TGG | - | chr5.1:45249523-45249542 | None:intergenic | 40.0% |
| ! | TTCTTGCTACTAGCTTCCAT+TGG | - | chr5.1:45249965-45249984 | None:intergenic | 40.0% |
| !! | AGGAAGGACATGCTCTAAAA+TGG | - | chr5.1:45251152-45251171 | None:intergenic | 40.0% |
| !! | CCACCCTTAAGCTCATTTTT+AGG | - | chr5.1:45253582-45253601 | None:intergenic | 40.0% |
| !! | CTTCCTATGTTGACTTCTTG+AGG | - | chr5.1:45250745-45250764 | None:intergenic | 40.0% |
| !! | TTTACATATGATAGCGGACC+TGG | - | chr5.1:45250295-45250314 | None:intergenic | 40.0% |
| !! | TTTGTTTTTCAGCCGAGATC+CGG | + | chr5.1:45253951-45253970 | MS.gene053782:intron | 40.0% |
| !!! | ATTTTAGAGCATGTCCTTCC+TGG | + | chr5.1:45251151-45251170 | MS.gene053782:intron | 40.0% |
| !!! | GGTGGTTTGTTCTGTTTTTC+TGG | + | chr5.1:45251664-45251683 | MS.gene053782:intron | 40.0% |
| AAACAGCTTATGGGTCCGTT+TGG | + | chr5.1:45249313-45249332 | MS.gene053782:intron | 45.0% | |
| ACCAATGTGCTACAAGCGAA+AGG | - | chr5.1:45252781-45252800 | None:intergenic | 45.0% | |
| AGAACAACGAAAACGTCCAG+AGG | - | chr5.1:45250532-45250551 | None:intergenic | 45.0% | |
| AGACAAAAGAACAACCAGGG+GGG | - | chr5.1:45251609-45251628 | None:intergenic | 45.0% | |
| ATGAGCTTAAGGGTGGTTAC+AGG | + | chr5.1:45253586-45253605 | MS.gene053782:intron | 45.0% | |
| ATGATCGGTATGTTCACCTC+TGG | + | chr5.1:45250513-45250532 | MS.gene053782:intron | 45.0% | |
| CAAATTGCGGGATCATAGAG+AGG | + | chr5.1:45250204-45250223 | MS.gene053782:intron | 45.0% | |
| CAAGGTCTTCATACTCCTAG+AGG | - | chr5.1:45252939-45252958 | None:intergenic | 45.0% | |
| CAATGTGCTACAAGCGAAAG+GGG | - | chr5.1:45252779-45252798 | None:intergenic | 45.0% | |
| CCAATGTGCTACAAGCGAAA+GGG | - | chr5.1:45252780-45252799 | None:intergenic | 45.0% | |
| CCACGATTTGAGTCTCTTTG+CGG | + | chr5.1:45250479-45250498 | MS.gene053782:CDS | 45.0% | |
| CGGGGAAGACAAACTTCAAA+AGG | - | chr5.1:45252352-45252371 | None:intergenic | 45.0% | |
| CTATTGCCAGGTTTCACTGT+AGG | - | chr5.1:45253511-45253530 | None:intergenic | 45.0% | |
| GAGACAAAAGAACAACCAGG+GGG | - | chr5.1:45251610-45251629 | None:intergenic | 45.0% | |
| GAGGAAGAGAAATGCTGCAA+AGG | + | chr5.1:45254150-45254169 | MS.gene053782:CDS | 45.0% | |
| GCTAGCTGATGTAACATTCG+AGG | + | chr5.1:45248932-45248951 | MS.gene053782:CDS | 45.0% | |
| GGAAGAATGTGTCGAAGTTG+TGG | + | chr5.1:45250760-45250779 | MS.gene053782:intron | 45.0% | |
| GGAGAGACAAAAGAACAACC+AGG | - | chr5.1:45251613-45251632 | None:intergenic | 45.0% | |
| GTCTTCATACTCCTAGAGGA+TGG | - | chr5.1:45252935-45252954 | None:intergenic | 45.0% | |
| GTTGCTTACATCTTCTGACG+AGG | - | chr5.1:45248803-45248822 | None:intergenic | 45.0% | |
| GTTTGGATTGAGGGTTTAGG+AGG | - | chr5.1:45253353-45253372 | None:intergenic | 45.0% | |
| TAATTTCCCCCATGTGCAAG+AGG | - | chr5.1:45253700-45253719 | None:intergenic | 45.0% | |
| TAGCAGGGAACTTATGAGCT+GGG | - | chr5.1:45251438-45251457 | None:intergenic | 45.0% | |
| TCGTAGATCTGGTGAAAACG+TGG | + | chr5.1:45254192-45254211 | MS.gene053782:CDS | 45.0% | |
| TCTGTGTGTGGAGTTGTGTA+GGG | + | chr5.1:45251557-45251576 | MS.gene053782:intron | 45.0% | |
| TGATCTTCCTGCTGAAAGAC+AGG | + | chr5.1:45252152-45252171 | MS.gene053782:CDS | 45.0% | |
| TGCAGAAAGCTCGATCGAAT+GGG | + | chr5.1:45248958-45248977 | MS.gene053782:CDS | 45.0% | |
| TGTGTTTGGATGGAGGGTTT+AGG | + | chr5.1:45253172-45253191 | MS.gene053782:intron | 45.0% | |
| TTCTGTGTGTGGAGTTGTGT+AGG | + | chr5.1:45251556-45251575 | MS.gene053782:intron | 45.0% | |
| TTGCACTTATCATGAGTGGG+AGG | + | chr5.1:45251462-45251481 | MS.gene053782:intron | 45.0% | |
| TTGCAGAAAGCTCGATCGAA+TGG | + | chr5.1:45248957-45248976 | MS.gene053782:CDS | 45.0% | |
| TTGGATTGAGGGTTTAGGAG+GGG | - | chr5.1:45253351-45253370 | None:intergenic | 45.0% | |
| TTTGGATGGAGGGTTTAGGA+GGG | + | chr5.1:45253176-45253195 | MS.gene053782:intron | 45.0% | |
| ! | CTAAGGGTGTGTTTGGATTG+AGG | - | chr5.1:45253363-45253382 | None:intergenic | 45.0% |
| ! | CTCTTAAGGGTGTGTTTGGA+TGG | + | chr5.1:45253162-45253181 | MS.gene053782:intron | 45.0% |
| ! | TAAGGGTGTGTTTGGATGGA+GGG | + | chr5.1:45253166-45253185 | MS.gene053782:intron | 45.0% |
| ! | TTAAGGGTGTGTTTGGATGG+AGG | + | chr5.1:45253165-45253184 | MS.gene053782:intron | 45.0% |
| !! | CTCTTCGTAGTGGGTTTCAT+CGG | - | chr5.1:45248749-45248768 | None:intergenic | 45.0% |
| !! | AAATAATTATATATTACTAA+GGG | - | chr5.1:45249874-45249893 | None:intergenic | 5.0% |
| !!! | ATTTGAAATTTTAAATTTTA+TGG | + | chr5.1:45253612-45253631 | MS.gene053782:intron | 5.0% |
| AAGCCTTTGCTTCCGGATCT+CGG | - | chr5.1:45253966-45253985 | None:intergenic | 50.0% | |
| ACGGCATCTTCTGGCATAAC+AGG | + | chr5.1:45252242-45252261 | MS.gene053782:intron | 50.0% | |
| AGAGAGAGAAGCAGCAAAGC+AGG | + | chr5.1:45252494-45252513 | MS.gene053782:CDS | 50.0% | |
| AGCACCTGCTGAACCAGAAA+AGG | - | chr5.1:45251634-45251653 | None:intergenic | 50.0% | |
| AGTTTGTCTTCCCCGTCCAA+AGG | + | chr5.1:45252357-45252376 | MS.gene053782:intron | 50.0% | |
| ATCAGCAGGGCAGAGATCAT+TGG | - | chr5.1:45250067-45250086 | None:intergenic | 50.0% | |
| ATCCCCTTTCCTCTTGCACA+TGG | + | chr5.1:45253688-45253707 | MS.gene053782:intron | 50.0% | |
| ATGAAGGTGAGCCATCCTCT+AGG | + | chr5.1:45252921-45252940 | MS.gene053782:intron | 50.0% | |
| ATTGAGGGTTTAGGAGGGGA+AGG | - | chr5.1:45253347-45253366 | None:intergenic | 50.0% | |
| ATTGCGGGATCATAGAGAGG+AGG | + | chr5.1:45250207-45250226 | MS.gene053782:intron | 50.0% | |
| ATTGTGCGAGAATGGGGAGT+AGG | - | chr5.1:45253396-45253415 | None:intergenic | 50.0% | |
| CAACACCCTACAGTGAAACC+TGG | + | chr5.1:45253502-45253521 | MS.gene053782:intron | 50.0% | |
| CAGGTTTCACTGTAGGGTGT+TGG | - | chr5.1:45253504-45253523 | None:intergenic | 50.0% | |
| CCCTTTCGCTTGTAGCACAT+TGG | + | chr5.1:45252777-45252796 | MS.gene053782:intron | 50.0% | |
| CCGCAAAGAGACTCAAATCG+TGG | - | chr5.1:45250482-45250501 | None:intergenic | 50.0% | |
| CTACCTACCTGTCTTTCAGC+AGG | - | chr5.1:45252162-45252181 | None:intergenic | 50.0% | |
| CTAGCAGGGAACTTATGAGC+TGG | - | chr5.1:45251439-45251458 | None:intergenic | 50.0% | |
| CTGCAGCAATACCCAAACAG+AGG | - | chr5.1:45251316-45251335 | None:intergenic | 50.0% | |
| CTTCCTGCTGAAAGACAGGT+AGG | + | chr5.1:45252156-45252175 | MS.gene053782:intron | 50.0% | |
| GAGAGAGAAGCAGCAAAGCA+GGG | + | chr5.1:45252495-45252514 | MS.gene053782:CDS | 50.0% | |
| GCAGAAAGCTCGATCGAATG+GGG | + | chr5.1:45248959-45248978 | MS.gene053782:CDS | 50.0% | |
| GCATGTGCACGCATACACAA+TGG | - | chr5.1:45251265-45251284 | None:intergenic | 50.0% | |
| GCTTACATCTTCTGACGAGG+AGG | - | chr5.1:45248800-45248819 | None:intergenic | 50.0% | |
| GTGCTTTCCCTCTGTGTGTA+GGG | + | chr5.1:45251751-45251770 | MS.gene053782:intron | 50.0% | |
| GTTTGGATGGAGGGTTTAGG+AGG | + | chr5.1:45253175-45253194 | MS.gene053782:intron | 50.0% | |
| TCCCCTTTCCTCTTGCACAT+GGG | + | chr5.1:45253689-45253708 | MS.gene053782:intron | 50.0% | |
| TGCTTTCCCTCTGTGTGTAG+GGG | + | chr5.1:45251752-45251771 | MS.gene053782:intron | 50.0% | |
| TTGAGGGTTTAGGAGGGGAA+GGG | - | chr5.1:45253346-45253365 | None:intergenic | 50.0% | |
| TTGGATGGAGGGTTTAGGAG+GGG | + | chr5.1:45253177-45253196 | MS.gene053782:intron | 50.0% | |
| TTGTGCGAGAATGGGGAGTA+GGG | - | chr5.1:45253395-45253414 | None:intergenic | 50.0% | |
| !! | AATAGCCAAGGAAAGGCACC+AGG | - | chr5.1:45251172-45251191 | None:intergenic | 50.0% |
| !! | GGGTTCTTTGGTTCTGTGTG+TGG | + | chr5.1:45251545-45251564 | MS.gene053782:intron | 50.0% |
| !! | TTTCTGGTTCAGCAGGTGCT+TGG | + | chr5.1:45251634-45251653 | MS.gene053782:intron | 50.0% |
| !!! | CTCTCCTTTTCTGGTTCAGC+AGG | + | chr5.1:45251627-45251646 | MS.gene053782:intron | 50.0% |
| AACGACCCCCTACACACAGA+GGG | - | chr5.1:45251761-45251780 | None:intergenic | 55.0% | |
| ATGGAGGGTTTAGGAGGGGA+AGG | + | chr5.1:45253181-45253200 | MS.gene053782:intron | 55.0% | |
| CAAAAGAACAACCAGGGGGG+CGG | - | chr5.1:45251606-45251625 | None:intergenic | 55.0% | |
| CCAGAAGATGCCGTCATGAG+AGG | - | chr5.1:45252236-45252255 | None:intergenic | 55.0% | |
| CCCCATGTGCAAGAGGAAAG+GGG | - | chr5.1:45253693-45253712 | None:intergenic | 55.0% | |
| CCCCCATGTGCAAGAGGAAA+GGG | - | chr5.1:45253694-45253713 | None:intergenic | 55.0% | |
| CCCCTTTCCTCTTGCACATG+GGG | + | chr5.1:45253690-45253709 | MS.gene053782:intron | 55.0% | |
| CCCTTTCCTCTTGCACATGG+GGG | + | chr5.1:45253691-45253710 | MS.gene053782:intron | 55.0% | |
| CCTCTCATGACGGCATCTTC+TGG | + | chr5.1:45252233-45252252 | MS.gene053782:intron | 55.0% | |
| CGTGCTTTCCCTCTGTGTGT+AGG | + | chr5.1:45251750-45251769 | MS.gene053782:intron | 55.0% | |
| CTACCGCTGCCAACAAAGGA+CGG | - | chr5.1:45251494-45251513 | None:intergenic | 55.0% | |
| GCTTTCCCTCTGTGTGTAGG+GGG | + | chr5.1:45251753-45251772 | MS.gene053782:intron | 55.0% | |
| GTCCTTTGTTGGCAGCGGTA+GGG | + | chr5.1:45251493-45251512 | MS.gene053782:intron | 55.0% | |
| TACCGCTGCCAACAAAGGAC+GGG | - | chr5.1:45251493-45251512 | None:intergenic | 55.0% | |
| TCCCCCATGTGCAAGAGGAA+AGG | - | chr5.1:45253695-45253714 | None:intergenic | 55.0% | |
| TCCTTCCTGGTGCCTTTCCT+TGG | + | chr5.1:45251164-45251183 | MS.gene053782:intron | 55.0% | |
| TGGAGGGTTTAGGAGGGGAA+GGG | + | chr5.1:45253182-45253201 | MS.gene053782:intron | 55.0% | |
| TGGTTCAGCAGGTGCTTGGT+TGG | + | chr5.1:45251638-45251657 | MS.gene053782:intron | 55.0% | |
| TGTGTGTAGGGGGTCGTTCT+GGG | + | chr5.1:45251763-45251782 | MS.gene053782:intron | 55.0% | |
| TGTGTGTTTCGGCCTTCCCA+GGG | + | chr5.1:45251726-45251745 | MS.gene053782:intron | 55.0% | |
| TTGCTAGCGCCCATACTCCT+AGG | + | chr5.1:45253550-45253569 | MS.gene053782:intron | 55.0% | |
| TTTCTCTGCCTCCTCTCCTC+TGG | + | chr5.1:45251580-45251599 | MS.gene053782:intron | 55.0% | |
| ! | CAGCAGGTGCTTGGTTGGTT+TGG | + | chr5.1:45251643-45251662 | MS.gene053782:intron | 55.0% |
| !! | CAGGTGCTTGGTTGGTTTGG+TGG | + | chr5.1:45251646-45251665 | MS.gene053782:intron | 55.0% |
| AGCCCGTCCTTTGTTGGCAG+CGG | + | chr5.1:45251488-45251507 | MS.gene053782:intron | 60.0% | |
| AGGGTTTAGGAGGGGAAGGG+AGG | + | chr5.1:45253185-45253204 | MS.gene053782:intron | 60.0% | |
| AGGGTTTAGGAGGGGAAGGG+AGG | - | chr5.1:45253204-45253185 | None:intergenic | 60.0% | |
| AGGTGCAGCCCGTCCTTTGT+TGG | + | chr5.1:45251482-45251501 | MS.gene053782:intron | 60.0% | |
| CAGCCGAGATCCGGAAGCAA+AGG | + | chr5.1:45253960-45253979 | MS.gene053782:intron | 60.0% | |
| CGTCCTTTGTTGGCAGCGGT+AGG | + | chr5.1:45251492-45251511 | MS.gene053782:intron | 60.0% | |
| CTGTGTGTAGGGGGTCGTTC+TGG | + | chr5.1:45251762-45251781 | MS.gene053782:intron | 60.0% | |
| GAACGACCCCCTACACACAG+AGG | - | chr5.1:45251762-45251781 | None:intergenic | 60.0% | |
| GGGTTTAGGAGGGGAAGGGA+GGG | + | chr5.1:45253186-45253205 | MS.gene053782:intron | 60.0% | |
| GGGTTTAGGAGGGGAAGGGA+GGG | - | chr5.1:45253205-45253186 | None:intergenic | 60.0% | |
| GGTTTAGGAGGGGAAGGGAG+GGG | + | chr5.1:45253187-45253206 | MS.gene053782:intron | 60.0% | |
| GGTTTAGGAGGGGAAGGGAG+GGG | - | chr5.1:45253206-45253187 | None:intergenic | 60.0% | |
| GTGTGTAGGGGGTCGTTCTG+GGG | + | chr5.1:45251764-45251783 | MS.gene053782:intron | 60.0% | |
| GTGTGTGTTTCGGCCTTCCC+AGG | + | chr5.1:45251725-45251744 | MS.gene053782:intron | 60.0% | |
| GTGTGTTTCGGCCTTCCCAG+GGG | + | chr5.1:45251727-45251746 | MS.gene053782:intron | 60.0% | |
| TGCCCTACCGCTGCCAACAA+AGG | - | chr5.1:45251498-45251517 | None:intergenic | 60.0% | |
| TGTGTAGGGGGTCGTTCTGG+GGG | + | chr5.1:45251765-45251784 | MS.gene053782:intron | 60.0% | |
| ! | AGCGGTAGGGCATTCTTGGG+GGG | + | chr5.1:45251506-45251525 | MS.gene053782:intron | 60.0% |
| ! | CAGCGGTAGGGCATTCTTGG+GGG | + | chr5.1:45251505-45251524 | MS.gene053782:intron | 60.0% |
| ! | GCAGCGGTAGGGCATTCTTG+GGG | + | chr5.1:45251504-45251523 | MS.gene053782:intron | 60.0% |
| ! | GGCAGCGGTAGGGCATTCTT+GGG | + | chr5.1:45251503-45251522 | MS.gene053782:intron | 60.0% |
| ! | TGGCAGCGGTAGGGCATTCT+TGG | + | chr5.1:45251502-45251521 | MS.gene053782:intron | 60.0% |
| !! | GCCAAGGAAAGGCACCAGGA+AGG | - | chr5.1:45251168-45251187 | None:intergenic | 60.0% |
| TAGGAGGGGAAGGGAGGGGA+GGG | + | chr5.1:45253191-45253210 | MS.gene053782:intron | 65.0% | |
| TAGGAGGGGAAGGGAGGGGA+GGG | - | chr5.1:45253210-45253191 | None:intergenic | 65.0% | |
| TTAGGAGGGGAAGGGAGGGG+AGG | + | chr5.1:45253190-45253209 | MS.gene053782:intron | 65.0% | |
| TTAGGAGGGGAAGGGAGGGG+AGG | - | chr5.1:45253209-45253190 | None:intergenic | 65.0% | |
| ! | ACAGAGGGAAAGCACGCCCC+TGG | - | chr5.1:45251746-45251765 | None:intergenic | 65.0% |
| ! | CAGAGGGAAAGCACGCCCCT+GGG | - | chr5.1:45251745-45251764 | None:intergenic | 65.0% |
| ! | CGGTAGGGCATTCTTGGGGG+GGG | + | chr5.1:45251508-45251527 | MS.gene053782:intron | 65.0% |
| ! | GCGGTAGGGCATTCTTGGGG+GGG | + | chr5.1:45251507-45251526 | MS.gene053782:intron | 65.0% |
| ! | GGTAGGGCATTCTTGGGGGG+GGG | + | chr5.1:45251509-45251528 | MS.gene053782:intron | 65.0% |
| ! | GTAGGGCATTCTTGGGGGGG+GGG | + | chr5.1:45251510-45251529 | MS.gene053782:intron | 65.0% |
| ! | GTGTAGGGGGTCGTTCTGGG+GGG | + | chr5.1:45251766-45251785 | MS.gene053782:intron | 65.0% |
| ! | TAGGGCATTCTTGGGGGGGG+GGG | + | chr5.1:45251511-45251530 | MS.gene053782:intron | 65.0% |
| ! | AGGGCATTCTTGGGGGGGGG+GGG | + | chr5.1:45251512-45251531 | MS.gene053782:intron | 70.0% |
| ! | GGGAAAGCACGCCCCTGGGA+AGG | - | chr5.1:45251741-45251760 | None:intergenic | 70.0% |
| ACAACCAGGGGGGCGGCCAG+AGG | - | chr5.1:45251599-45251618 | None:intergenic | 75.0% | |
| ATTCTTGGGGGGGGGGGGGG+GGG | + | chr5.1:45251517-45251536 | MS.gene053782:intron | 75.0% | |
| CATTCTTGGGGGGGGGGGGG+GGG | + | chr5.1:45251516-45251535 | MS.gene053782:intron | 75.0% | |
| GCATTCTTGGGGGGGGGGGG+GGG | + | chr5.1:45251515-45251534 | MS.gene053782:intron | 75.0% | |
| GGCATTCTTGGGGGGGGGGG+GGG | + | chr5.1:45251514-45251533 | MS.gene053782:intron | 75.0% | |
| GGGCATTCTTGGGGGGGGGG+GGG | + | chr5.1:45251513-45251532 | MS.gene053782:intron | 75.0% | |
| ! | CAGGGGGGCGGCCAGAGGAG+AGG | - | chr5.1:45251594-45251613 | None:intergenic | 80.0% |
| ! | CTCTCCTCTGGCCGCCCCCC+TGG | + | chr5.1:45251592-45251611 | MS.gene053782:intron | 80.0% |
| ! | GGGGGCGGCCAGAGGAGAGG+AGG | - | chr5.1:45251591-45251610 | None:intergenic | 80.0% |
| ! | GGGGGGGGGGGGGGGTTCTT+TGG | + | chr5.1:45251533-45251552 | MS.gene053782:intron | 80.0% |
| ! | TTCTTGGGGGGGGGGGGGGG+GGG | + | chr5.1:45251518-45251537 | MS.gene053782:intron | 80.0% |
| ! | TCTTGGGGGGGGGGGGGGGG+GGG | + | chr5.1:45251519-45251538 | MS.gene053782:intron | 85.0% |
| ! | CTTGGGGGGGGGGGGGGGGG+GGG | + | chr5.1:45251520-45251539 | MS.gene053782:intron | 90.0% |
| ! | TTGGGGGGGGGGGGGGGGGG+GGG | + | chr5.1:45251521-45251540 | MS.gene053782:intron | 90.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | + | chr5.1:45251522-45251541 | MS.gene053782:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 45248712 | 45254219 | 45248712 | ID=MS.gene053782 |
| chr5.1 | mRNA | 45248712 | 45254219 | 45248712 | ID=MS.gene053782.t1;Parent=MS.gene053782 |
| chr5.1 | exon | 45248712 | 45248813 | 45248712 | ID=MS.gene053782.t1.exon1;Parent=MS.gene053782.t1 |
| chr5.1 | CDS | 45248712 | 45248813 | 45248712 | ID=cds.MS.gene053782.t1;Parent=MS.gene053782.t1 |
| chr5.1 | exon | 45248906 | 45249042 | 45248906 | ID=MS.gene053782.t1.exon2;Parent=MS.gene053782.t1 |
| chr5.1 | CDS | 45248906 | 45249042 | 45248906 | ID=cds.MS.gene053782.t1;Parent=MS.gene053782.t1 |
| chr5.1 | exon | 45249961 | 45250027 | 45249961 | ID=MS.gene053782.t1.exon3;Parent=MS.gene053782.t1 |
| chr5.1 | CDS | 45249961 | 45250027 | 45249961 | ID=cds.MS.gene053782.t1;Parent=MS.gene053782.t1 |
| chr5.1 | exon | 45250467 | 45250519 | 45250467 | ID=MS.gene053782.t1.exon4;Parent=MS.gene053782.t1 |
| chr5.1 | CDS | 45250467 | 45250519 | 45250467 | ID=cds.MS.gene053782.t1;Parent=MS.gene053782.t1 |
| chr5.1 | exon | 45252119 | 45252173 | 45252119 | ID=MS.gene053782.t1.exon5;Parent=MS.gene053782.t1 |
| chr5.1 | CDS | 45252119 | 45252173 | 45252119 | ID=cds.MS.gene053782.t1;Parent=MS.gene053782.t1 |
| chr5.1 | exon | 45252264 | 45252338 | 45252264 | ID=MS.gene053782.t1.exon6;Parent=MS.gene053782.t1 |
| chr5.1 | CDS | 45252264 | 45252338 | 45252264 | ID=cds.MS.gene053782.t1;Parent=MS.gene053782.t1 |
| chr5.1 | exon | 45252426 | 45252543 | 45252426 | ID=MS.gene053782.t1.exon7;Parent=MS.gene053782.t1 |
| chr5.1 | CDS | 45252426 | 45252543 | 45252426 | ID=cds.MS.gene053782.t1;Parent=MS.gene053782.t1 |
| chr5.1 | exon | 45253963 | 45254009 | 45253963 | ID=MS.gene053782.t1.exon8;Parent=MS.gene053782.t1 |
| chr5.1 | CDS | 45253963 | 45254009 | 45253963 | ID=cds.MS.gene053782.t1;Parent=MS.gene053782.t1 |
| chr5.1 | exon | 45254115 | 45254219 | 45254115 | ID=MS.gene053782.t1.exon9;Parent=MS.gene053782.t1 |
| chr5.1 | CDS | 45254115 | 45254219 | 45254115 | ID=cds.MS.gene053782.t1;Parent=MS.gene053782.t1 |
| Gene Sequence |
| Protein sequence |
